####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 338), selected 35 , name T0548TS129_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS129_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 16 - 37 4.89 11.12 LONGEST_CONTINUOUS_SEGMENT: 22 20 - 41 4.90 11.26 LCS_AVERAGE: 57.71 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 15 - 22 1.90 19.54 LONGEST_CONTINUOUS_SEGMENT: 8 18 - 25 1.90 19.58 LCS_AVERAGE: 17.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 19 - 23 0.73 19.18 LONGEST_CONTINUOUS_SEGMENT: 5 27 - 31 0.74 19.61 LCS_AVERAGE: 10.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 3 3 16 0 3 3 3 3 4 9 10 10 12 14 15 15 15 16 16 16 16 17 18 LCS_GDT F 13 F 13 3 3 16 3 3 3 3 4 5 9 10 11 12 14 15 15 15 16 16 16 16 17 18 LCS_GDT H 14 H 14 3 3 18 3 3 3 3 4 8 9 10 11 13 14 15 15 16 17 17 18 19 19 19 LCS_GDT Y 15 Y 15 3 8 21 3 3 3 6 8 10 10 11 12 13 14 16 16 18 19 20 20 22 24 27 LCS_GDT T 16 T 16 4 8 22 4 4 5 6 9 10 10 12 14 17 18 19 21 21 23 24 25 26 27 27 LCS_GDT V 17 V 17 4 8 22 4 4 5 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT T 18 T 18 4 8 22 4 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT D 19 D 19 5 8 22 4 4 5 6 9 10 11 12 14 17 18 20 21 23 23 24 25 26 27 27 LCS_GDT I 20 I 20 5 8 22 3 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 21 K 21 5 8 22 3 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT D 22 D 22 5 8 22 3 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT L 23 L 23 5 8 22 3 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT T 24 T 24 3 8 22 3 3 4 6 7 8 10 11 13 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 25 K 25 3 8 22 3 4 6 6 9 10 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT L 26 L 26 3 6 22 3 4 4 5 8 8 11 12 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT G 27 G 27 5 6 22 4 4 5 6 9 9 11 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT A 28 A 28 5 6 22 4 4 5 6 9 9 10 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT I 29 I 29 5 6 22 4 4 5 6 9 9 11 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT Y 30 Y 30 5 6 22 4 4 5 6 9 9 10 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT D 31 D 31 5 5 22 4 4 5 6 9 9 10 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 32 K 32 4 4 22 4 4 4 6 7 9 9 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT T 33 T 33 4 4 22 4 4 4 4 4 7 8 10 12 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 34 K 34 4 6 22 4 4 4 6 9 9 10 13 14 17 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 35 K 35 3 6 22 3 3 3 6 9 9 10 13 14 15 17 20 22 23 23 24 25 26 27 27 LCS_GDT Y 36 Y 36 3 6 22 0 3 3 6 9 9 10 13 14 15 16 20 22 23 23 24 25 26 27 27 LCS_GDT W 37 W 37 3 6 22 0 3 3 6 9 9 10 13 14 15 16 20 22 23 23 24 25 26 27 27 LCS_GDT V 38 V 38 3 6 22 3 3 3 6 7 9 9 13 13 14 15 17 19 22 23 24 25 26 27 27 LCS_GDT Y 39 Y 39 3 6 22 3 3 3 6 7 9 9 13 13 13 15 17 19 20 22 24 25 26 27 27 LCS_GDT Q 40 Q 40 3 5 22 3 3 3 4 6 9 9 13 14 15 16 20 22 23 23 24 25 26 27 27 LCS_GDT G 41 G 41 3 5 22 0 3 3 5 8 8 8 9 14 16 18 20 22 23 23 24 25 26 27 27 LCS_GDT K 42 K 42 3 5 20 3 3 3 4 4 5 6 7 8 9 11 14 19 20 23 24 25 26 27 27 LCS_GDT P 43 P 43 3 5 17 3 3 3 4 4 5 6 6 7 8 8 11 12 15 17 19 20 23 23 25 LCS_GDT V 44 V 44 3 5 9 3 3 3 4 4 5 6 6 7 8 8 11 16 18 19 19 22 23 23 25 LCS_GDT M 45 M 45 3 4 9 3 3 3 4 4 4 6 9 11 13 14 16 19 20 21 21 23 24 25 25 LCS_GDT P 46 P 46 3 4 9 0 3 3 3 4 6 10 10 11 13 14 16 19 20 21 21 23 24 25 25 LCS_AVERAGE LCS_A: 28.49 ( 10.69 17.06 57.71 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 6 6 9 10 11 13 14 17 18 20 22 23 23 24 25 26 27 27 GDT PERCENT_AT 11.43 11.43 17.14 17.14 25.71 28.57 31.43 37.14 40.00 48.57 51.43 57.14 62.86 65.71 65.71 68.57 71.43 74.29 77.14 77.14 GDT RMS_LOCAL 0.23 0.23 1.15 1.15 1.76 2.10 2.70 3.08 3.13 3.72 3.89 4.39 4.75 4.87 4.87 5.05 5.26 5.44 5.71 5.71 GDT RMS_ALL_AT 20.92 20.92 18.26 18.26 17.67 18.71 12.81 15.12 11.93 11.65 11.50 10.98 10.87 10.86 10.86 10.83 10.88 10.82 10.73 10.73 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: D 22 D 22 # possible swapping detected: Y 30 Y 30 # possible swapping detected: D 31 D 31 # possible swapping detected: Y 36 Y 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 38.306 0 0.648 1.182 39.979 0.000 0.000 LGA F 13 F 13 34.870 0 0.643 1.296 37.690 0.000 0.000 LGA H 14 H 14 30.227 0 0.357 0.392 32.312 0.000 0.000 LGA Y 15 Y 15 24.845 0 0.630 1.535 27.541 0.000 0.000 LGA T 16 T 16 22.666 0 0.682 0.624 26.598 0.000 0.000 LGA V 17 V 17 20.444 0 0.172 0.218 21.713 0.000 0.000 LGA T 18 T 18 20.995 0 0.121 1.049 25.111 0.000 0.000 LGA D 19 D 19 19.510 0 0.567 0.817 21.868 0.000 0.000 LGA I 20 I 20 12.686 0 0.118 0.137 15.249 0.000 0.595 LGA K 21 K 21 13.765 0 0.026 1.401 17.464 0.000 0.000 LGA D 22 D 22 17.543 0 0.610 1.266 23.037 0.000 0.000 LGA L 23 L 23 14.118 0 0.296 0.421 16.897 0.000 0.000 LGA T 24 T 24 9.122 0 0.055 0.106 10.482 1.786 4.354 LGA K 25 K 25 10.958 0 0.112 0.943 20.141 0.119 0.053 LGA L 26 L 26 9.610 0 0.442 1.328 15.130 7.024 3.512 LGA G 27 G 27 3.364 0 0.571 0.571 5.727 39.643 39.643 LGA A 28 A 28 3.325 0 0.146 0.187 3.834 59.405 56.190 LGA I 29 I 29 3.001 0 0.040 1.232 8.882 55.476 34.940 LGA Y 30 Y 30 1.560 0 0.628 1.265 9.878 67.143 40.437 LGA D 31 D 31 3.737 0 0.584 1.220 9.577 51.905 28.214 LGA K 32 K 32 4.189 0 0.156 0.672 6.344 34.405 29.312 LGA T 33 T 33 6.616 0 0.011 0.694 9.992 21.786 13.605 LGA K 34 K 34 2.445 0 0.101 0.539 8.158 65.119 42.434 LGA K 35 K 35 3.502 0 0.604 0.681 10.913 53.690 29.471 LGA Y 36 Y 36 2.250 0 0.524 0.934 11.884 52.619 30.000 LGA W 37 W 37 2.076 0 0.191 1.209 9.304 66.786 31.531 LGA V 38 V 38 3.468 0 0.302 0.322 5.337 40.833 49.048 LGA Y 39 Y 39 3.818 0 0.153 1.001 13.676 59.524 23.929 LGA Q 40 Q 40 1.989 0 0.367 1.056 8.338 48.690 33.651 LGA G 41 G 41 7.867 0 0.507 0.507 10.006 9.048 9.048 LGA K 42 K 42 11.025 0 0.586 0.701 17.445 0.357 0.159 LGA P 43 P 43 14.046 0 0.436 0.539 16.120 0.000 0.000 LGA V 44 V 44 11.450 0 0.636 1.304 13.533 0.000 0.000 LGA M 45 M 45 9.862 0 0.090 0.609 10.156 0.357 0.833 LGA P 46 P 46 10.300 0 0.135 0.430 10.517 0.357 0.340 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 10.258 10.072 11.629 21.031 14.323 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 13 3.08 33.571 31.170 0.409 LGA_LOCAL RMSD: 3.082 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.121 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 10.258 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.566009 * X + -0.351364 * Y + -0.745773 * Z + -57.555424 Y_new = -0.008527 * X + 0.902082 * Y + -0.431480 * Z + -2.150447 Z_new = 0.824355 * X + 0.250581 * Y + 0.507591 * Z + 54.838718 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.015064 -0.969061 0.458568 [DEG: -0.8631 -55.5231 26.2740 ] ZXZ: -1.046285 1.038410 1.275699 [DEG: -59.9477 59.4965 73.0922 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS129_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS129_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 13 3.08 31.170 10.26 REMARK ---------------------------------------------------------- MOLECULE T0548TS129_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 100 N HIS 12 -53.711 5.042 43.693 1.00 1.00 N ATOM 101 CA HIS 12 -55.167 5.002 43.762 1.00 1.00 C ATOM 102 C HIS 12 -55.727 3.860 42.920 1.00 1.00 C ATOM 103 O HIS 12 -56.829 3.373 43.172 1.00 1.00 O ATOM 104 H HIS 12 -53.303 4.570 42.900 1.00 1.00 H ATOM 105 CB HIS 12 -55.750 6.331 43.308 1.00 1.00 C ATOM 106 CG HIS 12 -55.427 6.678 41.887 1.00 1.00 C ATOM 107 ND1 HIS 12 -54.218 6.373 41.303 1.00 1.00 N ATOM 108 CD2 HIS 12 -56.194 7.311 40.966 1.00 1.00 C ATOM 109 CE1 HIS 12 -54.224 6.807 40.030 1.00 1.00 C ATOM 110 NE2 HIS 12 -55.527 7.417 39.835 1.00 1.00 N ATOM 111 HD1 HIS 12 -53.526 5.908 41.820 1.00 1.00 H ATOM 112 HE2 HIS 12 -55.940 7.852 39.060 1.00 1.00 H ATOM 113 N PHE 13 -56.816 4.134 42.211 1.00 1.00 N ATOM 114 CA PHE 13 -57.451 3.131 41.364 1.00 1.00 C ATOM 115 C PHE 13 -56.485 2.611 40.305 1.00 1.00 C ATOM 116 O PHE 13 -56.821 1.714 39.531 1.00 1.00 O ATOM 117 H PHE 13 -57.262 5.040 42.216 1.00 1.00 H ATOM 118 CB PHE 13 -58.695 3.711 40.709 1.00 1.00 C ATOM 119 CG PHE 13 -59.590 2.678 40.085 1.00 1.00 C ATOM 120 CD1 PHE 13 -60.409 1.886 40.871 1.00 1.00 C ATOM 121 CD2 PHE 13 -59.600 2.510 38.711 1.00 1.00 C ATOM 122 CE1 PHE 13 -61.228 0.938 40.282 1.00 1.00 C ATOM 123 CE2 PHE 13 -60.424 1.558 38.138 1.00 1.00 C ATOM 124 CZ PHE 13 -61.226 0.782 38.906 1.00 1.00 C ATOM 125 N HIS 14 -55.285 3.181 40.275 1.00 1.00 N ATOM 126 CA HIS 14 -54.268 2.777 39.312 1.00 1.00 C ATOM 127 C HIS 14 -53.085 2.111 40.005 1.00 1.00 C ATOM 128 O HIS 14 -51.930 2.457 39.756 1.00 1.00 O ATOM 129 H HIS 14 -55.009 3.917 40.910 1.00 1.00 H ATOM 130 CB HIS 14 -53.801 3.980 38.507 1.00 1.00 C ATOM 131 CG HIS 14 -52.880 3.633 37.380 1.00 1.00 C ATOM 132 ND1 HIS 14 -51.578 3.230 37.580 1.00 1.00 N ATOM 133 CD2 HIS 14 -53.119 3.644 36.045 1.00 1.00 C ATOM 134 CE1 HIS 14 -51.005 2.990 36.387 1.00 1.00 C ATOM 135 NE2 HIS 14 -52.032 3.268 35.399 1.00 1.00 N ATOM 136 HD1 HIS 14 -51.221 3.161 38.490 1.00 1.00 H ATOM 137 HE2 HIS 14 -52.036 3.221 34.421 1.00 1.00 H ATOM 138 N TYR 15 -53.380 1.152 40.879 1.00 1.00 N ATOM 139 CA TYR 15 -52.342 0.437 41.610 1.00 1.00 C ATOM 140 C TYR 15 -52.830 -0.938 42.057 1.00 1.00 C ATOM 141 O TYR 15 -52.122 -1.661 42.758 1.00 1.00 O ATOM 142 H TYR 15 -54.327 0.868 41.084 1.00 1.00 H ATOM 143 CB TYR 15 -51.887 1.254 42.810 1.00 1.00 C ATOM 144 CG TYR 15 -51.001 0.493 43.769 1.00 1.00 C ATOM 145 CD1 TYR 15 -49.713 0.122 43.406 1.00 1.00 C ATOM 146 CD2 TYR 15 -51.456 0.147 45.035 1.00 1.00 C ATOM 147 CE1 TYR 15 -48.896 -0.574 44.278 1.00 1.00 C ATOM 148 CE2 TYR 15 -50.654 -0.548 45.919 1.00 1.00 C ATOM 149 CZ TYR 15 -49.364 -0.908 45.530 1.00 1.00 C ATOM 150 OH TYR 15 -48.556 -1.601 46.402 1.00 1.00 H ATOM 151 N THR 16 -54.046 -1.290 41.649 1.00 1.00 N ATOM 152 CA THR 16 -54.630 -2.577 42.007 1.00 1.00 C ATOM 153 C THR 16 -55.169 -3.299 40.776 1.00 1.00 C ATOM 154 O THR 16 -55.795 -4.353 40.887 1.00 1.00 O ATOM 155 H THR 16 -54.626 -0.696 41.074 1.00 1.00 H ATOM 156 CB THR 16 -55.736 -2.381 43.033 1.00 1.00 C ATOM 157 OG1 THR 16 -56.795 -1.608 42.457 1.00 1.00 O ATOM 158 CG2 THR 16 -55.195 -1.682 44.272 1.00 1.00 C ATOM 159 N VAL 17 -56.065 -2.636 40.053 1.00 1.00 N ATOM 160 CA VAL 17 -56.659 -3.212 38.852 1.00 1.00 C ATOM 161 C VAL 17 -55.878 -2.813 37.604 1.00 1.00 C ATOM 162 O VAL 17 -56.050 -3.402 36.538 1.00 1.00 O ATOM 163 H VAL 17 -56.384 -1.707 40.288 1.00 1.00 H ATOM 164 CB VAL 17 -58.112 -2.781 38.729 1.00 1.00 C ATOM 165 CG1 VAL 17 -58.708 -3.287 37.423 1.00 1.00 C ATOM 166 CG2 VAL 17 -58.920 -3.283 39.915 1.00 1.00 C ATOM 167 N THR 18 -55.018 -1.810 37.746 1.00 1.00 N ATOM 168 CA THR 18 -54.210 -1.330 36.633 1.00 1.00 C ATOM 169 C THR 18 -52.731 -1.626 36.856 1.00 1.00 C ATOM 170 O THR 18 -51.959 -1.738 35.904 1.00 1.00 O ATOM 171 H THR 18 -54.877 -1.326 38.621 1.00 1.00 H ATOM 172 CB THR 18 -54.427 0.163 36.432 1.00 1.00 C ATOM 173 OG1 THR 18 -53.948 0.876 37.578 1.00 1.00 O ATOM 174 CG2 THR 18 -55.902 0.461 36.213 1.00 1.00 C ATOM 175 N ASP 19 -52.343 -1.752 38.121 1.00 1.00 N ATOM 176 CA ASP 19 -50.956 -2.036 38.473 1.00 1.00 C ATOM 177 C ASP 19 -50.487 -3.347 37.852 1.00 1.00 C ATOM 178 O ASP 19 -50.735 -4.425 38.392 1.00 1.00 O ATOM 179 H ASP 19 -52.976 -1.660 38.903 1.00 1.00 H ATOM 180 CB ASP 19 -50.799 -2.078 39.985 1.00 1.00 C ATOM 181 CG ASP 19 -49.349 -1.995 40.422 1.00 1.00 C ATOM 182 OD1 ASP 19 -48.518 -1.500 39.632 1.00 1.00 O ATOM 183 OD2 ASP 19 -49.045 -2.427 41.554 1.00 1.00 O ATOM 184 N ILE 20 -49.946 -3.263 36.641 1.00 1.00 N ATOM 185 CA ILE 20 -49.458 -4.441 35.936 1.00 1.00 C ATOM 186 C ILE 20 -50.597 -5.183 35.246 1.00 1.00 C ATOM 187 O ILE 20 -50.369 -5.989 34.344 1.00 1.00 O ATOM 188 H ILE 20 -49.844 -2.389 36.144 1.00 1.00 H ATOM 189 CB ILE 20 -48.732 -5.365 36.902 1.00 1.00 C ATOM 190 CG1 ILE 20 -47.594 -4.618 37.601 1.00 1.00 C ATOM 191 CG2 ILE 20 -48.218 -6.599 36.176 1.00 1.00 C ATOM 192 CD1 ILE 20 -46.907 -5.426 38.680 1.00 1.00 C ATOM 193 N LYS 21 -51.708 -5.348 35.958 1.00 1.00 N ATOM 194 CA LYS 21 -52.870 -6.040 35.416 1.00 1.00 C ATOM 195 C LYS 21 -53.297 -5.438 34.082 1.00 1.00 C ATOM 196 O LYS 21 -53.457 -6.150 33.091 1.00 1.00 O ATOM 197 H LYS 21 -51.809 -5.008 36.905 1.00 1.00 H ATOM 198 CB LYS 21 -54.019 -5.992 36.412 1.00 1.00 C ATOM 199 CG LYS 21 -53.936 -7.043 37.506 1.00 1.00 C ATOM 200 CD LYS 21 -53.248 -6.497 38.746 1.00 1.00 C ATOM 201 CE LYS 21 -52.863 -7.615 39.702 1.00 1.00 C ATOM 202 NZ LYS 21 -52.251 -7.089 40.953 1.00 1.00 N ATOM 203 N ASP 22 -53.464 -4.118 34.059 1.00 1.00 N ATOM 204 CA ASP 22 -53.870 -3.418 32.847 1.00 1.00 C ATOM 205 C ASP 22 -52.686 -2.712 32.194 1.00 1.00 C ATOM 206 O ASP 22 -51.573 -2.732 32.720 1.00 1.00 O ATOM 207 H ASP 22 -53.320 -3.532 34.869 1.00 1.00 H ATOM 208 CB ASP 22 -54.973 -2.420 33.165 1.00 1.00 C ATOM 209 CG ASP 22 -55.746 -1.994 31.932 1.00 1.00 C ATOM 210 OD1 ASP 22 -56.328 -2.874 31.263 1.00 1.00 O ATOM 211 OD2 ASP 22 -55.770 -0.782 31.635 1.00 1.00 O ATOM 212 N LEU 23 -51.937 -3.451 31.383 1.00 1.00 N ATOM 213 CA LEU 23 -50.776 -2.898 30.696 1.00 1.00 C ATOM 214 C LEU 23 -50.997 -2.849 29.189 1.00 1.00 C ATOM 215 O LEU 23 -51.785 -2.042 28.693 1.00 1.00 O ATOM 216 H LEU 23 -52.125 -4.426 31.196 1.00 1.00 H ATOM 217 CB LEU 23 -49.536 -3.716 31.023 1.00 1.00 C ATOM 218 CG LEU 23 -48.316 -2.933 31.510 1.00 1.00 C ATOM 219 CD1 LEU 23 -47.029 -3.584 31.024 1.00 1.00 C ATOM 220 CD2 LEU 23 -48.384 -1.487 31.041 1.00 1.00 C ATOM 221 N THR 24 -50.299 -3.717 28.464 1.00 1.00 N ATOM 222 CA THR 24 -50.418 -3.774 27.012 1.00 1.00 C ATOM 223 C THR 24 -51.549 -4.705 26.587 1.00 1.00 C ATOM 224 O THR 24 -52.144 -4.529 25.524 1.00 1.00 O ATOM 225 H THR 24 -49.653 -4.379 28.871 1.00 1.00 H ATOM 226 CB THR 24 -49.102 -4.223 26.395 1.00 1.00 C ATOM 227 OG1 THR 24 -48.693 -5.462 26.986 1.00 1.00 O ATOM 228 CG2 THR 24 -48.028 -3.166 26.606 1.00 1.00 C ATOM 229 N LYS 25 -51.839 -5.695 27.424 1.00 1.00 N ATOM 230 CA LYS 25 -52.898 -6.655 27.136 1.00 1.00 C ATOM 231 C LYS 25 -52.681 -7.327 25.784 1.00 1.00 C ATOM 232 O LYS 25 -53.477 -8.167 25.363 1.00 1.00 O ATOM 233 H LYS 25 -51.350 -5.839 28.296 1.00 1.00 H ATOM 234 CB LYS 25 -54.254 -5.968 27.177 1.00 1.00 C ATOM 235 CG LYS 25 -54.517 -5.188 28.455 1.00 1.00 C ATOM 236 CD LYS 25 -54.733 -6.119 29.636 1.00 1.00 C ATOM 237 CE LYS 25 -56.206 -6.451 29.815 1.00 1.00 C ATOM 238 NZ LYS 25 -56.406 -7.638 30.691 1.00 1.00 N ATOM 239 N LEU 26 -51.423 -7.606 25.462 1.00 1.00 N ATOM 240 CA LEU 26 -51.080 -8.246 24.199 1.00 1.00 C ATOM 241 C LEU 26 -49.842 -9.126 24.344 1.00 1.00 C ATOM 242 O LEU 26 -48.774 -8.802 23.825 1.00 1.00 O ATOM 243 H LEU 26 -50.641 -7.392 26.064 1.00 1.00 H ATOM 244 CB LEU 26 -50.859 -7.195 23.121 1.00 1.00 C ATOM 245 CG LEU 26 -52.043 -6.275 22.819 1.00 1.00 C ATOM 246 CD1 LEU 26 -51.755 -5.407 21.604 1.00 1.00 C ATOM 247 CD2 LEU 26 -53.312 -7.085 22.599 1.00 1.00 C ATOM 248 N GLY 27 -49.965 -10.384 23.934 1.00 1.00 N ATOM 249 CA GLY 27 -48.857 -11.328 24.019 1.00 1.00 C ATOM 250 C GLY 27 -49.360 -12.747 24.267 1.00 1.00 C ATOM 251 O GLY 27 -50.322 -12.954 25.006 1.00 1.00 O ATOM 252 H GLY 27 -50.820 -10.755 23.546 1.00 1.00 H ATOM 253 N ALA 28 -48.563 -13.535 24.979 1.00 1.00 N ATOM 254 CA ALA 28 -48.924 -14.913 25.288 1.00 1.00 C ATOM 255 C ALA 28 -48.419 -15.321 26.668 1.00 1.00 C ATOM 256 O ALA 28 -47.225 -15.233 26.953 1.00 1.00 O ATOM 257 H ALA 28 -47.670 -13.231 25.342 1.00 1.00 H ATOM 258 CB ALA 28 -48.372 -15.850 24.223 1.00 1.00 C ATOM 259 N ILE 29 -49.248 -15.102 27.683 1.00 1.00 N ATOM 260 CA ILE 29 -48.888 -15.445 29.053 1.00 1.00 C ATOM 261 C ILE 29 -48.736 -16.954 29.222 1.00 1.00 C ATOM 262 O ILE 29 -49.484 -17.732 28.631 1.00 1.00 O ATOM 263 H ILE 29 -50.163 -14.692 27.568 1.00 1.00 H ATOM 264 CB ILE 29 -49.931 -14.906 30.019 1.00 1.00 C ATOM 265 CG1 ILE 29 -49.857 -13.380 30.088 1.00 1.00 C ATOM 266 CG2 ILE 29 -49.756 -15.530 31.396 1.00 1.00 C ATOM 267 CD1 ILE 29 -50.929 -12.754 30.954 1.00 1.00 C ATOM 268 N TYR 30 -47.763 -17.358 30.032 1.00 1.00 N ATOM 269 CA TYR 30 -47.510 -18.773 30.280 1.00 1.00 C ATOM 270 C TYR 30 -48.711 -19.439 30.942 1.00 1.00 C ATOM 271 O TYR 30 -48.965 -20.626 30.739 1.00 1.00 O ATOM 272 H TYR 30 -47.149 -16.719 30.516 1.00 1.00 H ATOM 273 CB TYR 30 -46.269 -18.940 31.142 1.00 1.00 C ATOM 274 CG TYR 30 -44.971 -18.708 30.400 1.00 1.00 C ATOM 275 CD1 TYR 30 -44.211 -17.570 30.635 1.00 1.00 C ATOM 276 CD2 TYR 30 -44.512 -19.628 29.468 1.00 1.00 C ATOM 277 CE1 TYR 30 -43.025 -17.350 29.962 1.00 1.00 C ATOM 278 CE2 TYR 30 -43.328 -19.425 28.784 1.00 1.00 C ATOM 279 CZ TYR 30 -42.584 -18.274 29.040 1.00 1.00 C ATOM 280 OH TYR 30 -41.403 -18.062 28.366 1.00 1.00 H ATOM 281 N ASP 31 -49.448 -18.667 31.735 1.00 1.00 N ATOM 282 CA ASP 31 -50.623 -19.181 32.428 1.00 1.00 C ATOM 283 C ASP 31 -51.764 -19.450 31.454 1.00 1.00 C ATOM 284 O ASP 31 -52.565 -20.363 31.657 1.00 1.00 O ATOM 285 H ASP 31 -49.240 -17.693 31.902 1.00 1.00 H ATOM 286 CB ASP 31 -51.065 -18.201 33.505 1.00 1.00 C ATOM 287 CG ASP 31 -50.060 -18.083 34.634 1.00 1.00 C ATOM 288 OD1 ASP 31 -48.969 -18.681 34.522 1.00 1.00 O ATOM 289 OD2 ASP 31 -50.363 -17.392 35.629 1.00 1.00 O ATOM 290 N LYS 32 -51.833 -18.649 30.395 1.00 1.00 N ATOM 291 CA LYS 32 -52.937 -19.010 29.675 1.00 1.00 C ATOM 292 C LYS 32 -52.585 -20.247 28.855 1.00 1.00 C ATOM 293 O LYS 32 -53.462 -21.030 28.488 1.00 1.00 O ATOM 294 H LYS 32 -51.176 -17.900 30.228 1.00 1.00 H ATOM 295 CB LYS 32 -53.161 -17.814 28.787 1.00 1.00 C ATOM 296 CG LYS 32 -53.429 -16.522 29.543 1.00 1.00 C ATOM 297 CD LYS 32 -53.556 -15.343 28.591 1.00 1.00 C ATOM 298 CE LYS 32 -53.759 -14.042 29.350 1.00 1.00 C ATOM 299 NZ LYS 32 -53.878 -12.876 28.431 1.00 1.00 N ATOM 300 N THR 33 -51.300 -20.411 28.562 1.00 1.00 N ATOM 301 CA THR 33 -50.831 -21.552 27.785 1.00 1.00 C ATOM 302 C THR 33 -50.921 -22.844 28.592 1.00 1.00 C ATOM 303 O THR 33 -51.030 -23.932 28.028 1.00 1.00 O ATOM 304 H THR 33 -50.581 -19.769 28.863 1.00 1.00 H ATOM 305 CB THR 33 -49.402 -21.317 27.320 1.00 1.00 C ATOM 306 OG1 THR 33 -49.357 -20.161 26.472 1.00 1.00 O ATOM 307 CG2 THR 33 -48.878 -22.532 26.570 1.00 1.00 C ATOM 308 N LYS 34 -50.874 -22.714 29.914 1.00 1.00 N ATOM 309 CA LYS 34 -50.950 -23.869 30.800 1.00 1.00 C ATOM 310 C LYS 34 -49.690 -24.722 30.703 1.00 1.00 C ATOM 311 O LYS 34 -49.615 -25.805 31.285 1.00 1.00 O ATOM 312 H LYS 34 -50.784 -21.820 30.376 1.00 1.00 H ATOM 313 CB LYS 34 -52.180 -24.700 30.472 1.00 1.00 C ATOM 314 CG LYS 34 -53.495 -24.044 30.862 1.00 1.00 C ATOM 315 CD LYS 34 -54.684 -24.842 30.352 1.00 1.00 C ATOM 316 CE LYS 34 -55.994 -24.269 30.863 1.00 1.00 C ATOM 317 NZ LYS 34 -57.172 -24.996 30.313 1.00 1.00 N ATOM 318 N LYS 35 -48.702 -24.228 29.964 1.00 1.00 N ATOM 319 CA LYS 35 -47.444 -24.944 29.789 1.00 1.00 C ATOM 320 C LYS 35 -46.251 -24.000 29.901 1.00 1.00 C ATOM 321 O LYS 35 -46.204 -23.147 30.787 1.00 1.00 O ATOM 322 H LYS 35 -48.763 -23.340 29.486 1.00 1.00 H ATOM 323 CB LYS 35 -47.430 -25.658 28.446 1.00 1.00 C ATOM 324 CG LYS 35 -47.809 -27.128 28.521 1.00 1.00 C ATOM 325 CD LYS 35 -47.304 -27.891 27.307 1.00 1.00 C ATOM 326 CE LYS 35 -48.333 -27.895 26.189 1.00 1.00 C ATOM 327 NZ LYS 35 -48.692 -29.277 25.770 1.00 1.00 N ATOM 328 N TYR 36 -45.289 -24.159 28.997 1.00 1.00 N ATOM 329 CA TYR 36 -44.096 -23.322 28.994 1.00 1.00 C ATOM 330 C TYR 36 -44.083 -22.386 27.790 1.00 1.00 C ATOM 331 O TYR 36 -43.028 -22.102 27.223 1.00 1.00 O ATOM 332 H TYR 36 -45.328 -24.859 28.271 1.00 1.00 H ATOM 333 CB TYR 36 -42.847 -24.191 29.003 1.00 1.00 C ATOM 334 CG TYR 36 -41.555 -23.406 29.019 1.00 1.00 C ATOM 335 CD1 TYR 36 -40.477 -23.795 28.235 1.00 1.00 C ATOM 336 CD2 TYR 36 -41.418 -22.278 29.819 1.00 1.00 C ATOM 337 CE1 TYR 36 -39.292 -23.084 28.243 1.00 1.00 C ATOM 338 CE2 TYR 36 -40.241 -21.554 29.839 1.00 1.00 C ATOM 339 CZ TYR 36 -39.174 -21.967 29.042 1.00 1.00 C ATOM 340 OH TYR 36 -37.997 -21.254 29.055 1.00 1.00 H ATOM 341 N TRP 37 -45.263 -21.911 27.404 1.00 1.00 N ATOM 342 CA TRP 37 -45.390 -21.006 26.266 1.00 1.00 C ATOM 343 C TRP 37 -45.544 -21.781 24.961 1.00 1.00 C ATOM 344 O TRP 37 -44.588 -22.374 24.463 1.00 1.00 O ATOM 345 H TRP 37 -46.129 -22.145 27.867 1.00 1.00 H ATOM 346 CB TRP 37 -44.182 -20.083 26.195 1.00 1.00 C ATOM 347 CG TRP 37 -44.208 -19.153 25.022 1.00 1.00 C ATOM 348 CD1 TRP 37 -45.304 -18.766 24.306 1.00 1.00 C ATOM 349 CD2 TRP 37 -43.085 -18.491 24.426 1.00 1.00 C ATOM 350 NE1 TRP 37 -44.934 -17.905 23.301 1.00 1.00 N ATOM 351 CE2 TRP 37 -43.576 -17.720 23.354 1.00 1.00 C ATOM 352 CE3 TRP 37 -41.713 -18.478 24.696 1.00 1.00 C ATOM 353 CZ2 TRP 37 -42.743 -16.942 22.552 1.00 1.00 C ATOM 354 CZ3 TRP 37 -40.889 -17.705 23.900 1.00 1.00 C ATOM 355 CH2 TRP 37 -41.383 -16.907 22.795 1.00 1.00 H ATOM 356 HH2 TRP 37 -45.612 -17.536 22.697 1.00 1.00 H ATOM 357 N VAL 38 -45.077 -23.024 24.957 1.00 1.00 N ATOM 358 CA VAL 38 -45.163 -23.872 23.774 1.00 1.00 C ATOM 359 C VAL 38 -44.099 -23.494 22.748 1.00 1.00 C ATOM 360 O VAL 38 -44.399 -22.868 21.731 1.00 1.00 O ATOM 361 H VAL 38 -44.641 -23.451 25.763 1.00 1.00 H ATOM 362 CB VAL 38 -46.551 -23.773 23.160 1.00 1.00 C ATOM 363 CG1 VAL 38 -46.587 -24.473 21.809 1.00 1.00 C ATOM 364 CG2 VAL 38 -47.592 -24.367 24.097 1.00 1.00 C ATOM 365 N TYR 39 -43.539 -22.298 22.896 1.00 1.00 N ATOM 366 CA TYR 39 -42.509 -21.816 21.983 1.00 1.00 C ATOM 367 C TYR 39 -43.122 -21.282 20.693 1.00 1.00 C ATOM 368 O TYR 39 -43.504 -22.050 19.810 1.00 1.00 O ATOM 369 H TYR 39 -43.790 -21.662 23.639 1.00 1.00 H ATOM 370 CB TYR 39 -41.518 -22.929 21.678 1.00 1.00 C ATOM 371 CG TYR 39 -40.509 -23.169 22.778 1.00 1.00 C ATOM 372 CD1 TYR 39 -40.792 -24.039 23.824 1.00 1.00 C ATOM 373 CD2 TYR 39 -39.278 -22.528 22.766 1.00 1.00 C ATOM 374 CE1 TYR 39 -39.876 -24.264 24.834 1.00 1.00 C ATOM 375 CE2 TYR 39 -38.349 -22.742 23.768 1.00 1.00 C ATOM 376 CZ TYR 39 -38.660 -23.619 24.806 1.00 1.00 C ATOM 377 OH TYR 39 -37.743 -23.840 25.809 1.00 1.00 H ATOM 378 N GLN 40 -43.214 -19.960 20.591 1.00 1.00 N ATOM 379 CA GLN 40 -43.780 -19.320 19.409 1.00 1.00 C ATOM 380 C GLN 40 -42.911 -18.157 18.941 1.00 1.00 C ATOM 381 O GLN 40 -42.751 -17.166 19.652 1.00 1.00 O ATOM 382 H GLN 40 -42.901 -19.329 21.314 1.00 1.00 H ATOM 383 CB GLN 40 -45.194 -18.841 19.700 1.00 1.00 C ATOM 384 CG GLN 40 -46.179 -19.961 19.996 1.00 1.00 C ATOM 385 CD GLN 40 -47.592 -19.453 20.203 1.00 1.00 C ATOM 386 OE1 GLN 40 -48.501 -19.911 19.478 1.00 1.00 O ATOM 387 NE2 GLN 40 -47.760 -18.545 21.157 1.00 1.00 N ATOM 388 HE21 GLN 40 -46.991 -18.238 21.682 1.00 1.00 H ATOM 389 HE22 GLN 40 -48.652 -18.181 21.336 1.00 1.00 H ATOM 390 N GLY 41 -41.959 -18.453 18.064 1.00 1.00 N ATOM 391 CA GLY 41 -41.060 -17.434 17.537 1.00 1.00 C ATOM 392 C GLY 41 -41.405 -17.086 16.092 1.00 1.00 C ATOM 393 O GLY 41 -42.262 -16.241 15.834 1.00 1.00 O ATOM 394 H GLY 41 -41.803 -19.388 17.714 1.00 1.00 H ATOM 395 N LYS 42 -40.922 -15.936 15.633 1.00 1.00 N ATOM 396 CA LYS 42 -41.179 -15.487 14.270 1.00 1.00 C ATOM 397 C LYS 42 -41.025 -16.631 13.274 1.00 1.00 C ATOM 398 O LYS 42 -41.891 -16.850 12.426 1.00 1.00 O ATOM 399 H LYS 42 -40.357 -15.314 16.194 1.00 1.00 H ATOM 400 CB LYS 42 -40.243 -14.342 13.911 1.00 1.00 C ATOM 401 CG LYS 42 -40.393 -13.117 14.799 1.00 1.00 C ATOM 402 CD LYS 42 -39.404 -12.030 14.412 1.00 1.00 C ATOM 403 CE LYS 42 -39.524 -10.822 15.326 1.00 1.00 C ATOM 404 NZ LYS 42 -38.388 -9.876 15.150 1.00 1.00 N ATOM 405 N PRO 43 -39.847 -17.244 13.263 1.00 1.00 N ATOM 406 CA PRO 43 -39.568 -18.354 12.359 1.00 1.00 C ATOM 407 C PRO 43 -39.684 -19.693 13.079 1.00 1.00 C ATOM 408 O PRO 43 -40.778 -20.241 13.220 1.00 1.00 O ATOM 409 H PRO 43 -39.847 -17.244 13.263 1.00 1.00 H ATOM 410 CB PRO 43 -38.183 -18.197 11.750 1.00 1.00 C ATOM 411 CG PRO 43 -37.398 -17.470 12.789 1.00 1.00 C ATOM 412 CD PRO 43 -38.322 -16.429 13.359 1.00 1.00 C ATOM 413 N VAL 44 -38.549 -20.215 13.531 1.00 1.00 N ATOM 414 CA VAL 44 -38.521 -21.492 14.237 1.00 1.00 C ATOM 415 C VAL 44 -37.953 -21.333 15.644 1.00 1.00 C ATOM 416 O VAL 44 -38.124 -22.205 16.494 1.00 1.00 O ATOM 417 H VAL 44 -37.652 -19.766 13.416 1.00 1.00 H ATOM 418 CB VAL 44 -37.707 -22.507 13.449 1.00 1.00 C ATOM 419 CG1 VAL 44 -36.242 -22.101 13.410 1.00 1.00 C ATOM 420 CG2 VAL 44 -37.862 -23.895 14.050 1.00 1.00 C ATOM 421 N MET 45 -37.703 -20.088 16.037 1.00 1.00 N ATOM 422 CA MET 45 -37.159 -19.797 17.359 1.00 1.00 C ATOM 423 C MET 45 -37.787 -18.539 17.949 1.00 1.00 C ATOM 424 O MET 45 -37.469 -17.424 17.539 1.00 1.00 O ATOM 425 H MET 45 -37.873 -19.282 15.453 1.00 1.00 H ATOM 426 CB MET 45 -35.647 -19.649 17.281 1.00 1.00 C ATOM 427 CG MET 45 -34.891 -20.966 17.340 1.00 1.00 C ATOM 428 SD MET 45 -33.102 -20.740 17.379 1.00 1.00 S ATOM 429 CE MET 45 -32.547 -22.441 17.448 1.00 1.00 C ATOM 430 N PRO 46 -37.831 -18.473 19.276 1.00 1.00 N ATOM 431 CA PRO 46 -38.404 -17.324 19.967 1.00 1.00 C ATOM 432 C PRO 46 -37.385 -16.199 20.107 1.00 1.00 C ATOM 433 O PRO 46 -36.250 -16.425 20.529 1.00 1.00 O ATOM 434 H PRO 46 -37.831 -18.473 19.276 1.00 1.00 H ATOM 435 CB PRO 46 -38.925 -17.741 21.334 1.00 1.00 C ATOM 436 CG PRO 46 -38.082 -18.913 21.712 1.00 1.00 C ATOM 437 CD PRO 46 -37.779 -19.639 20.431 1.00 1.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 96.55 25.0 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 94.13 29.4 34 100.0 34 ARMSMC SURFACE . . . . . . . . 91.77 30.4 56 100.0 56 ARMSMC BURIED . . . . . . . . 116.29 0.0 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.81 28.1 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 80.26 24.1 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 88.79 23.5 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 75.74 29.6 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 93.69 20.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.05 36.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 55.58 38.1 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 66.12 30.8 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 68.31 40.9 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 56.93 0.0 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.57 50.0 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 82.53 57.1 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 112.01 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 91.57 50.0 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.85 66.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 58.85 66.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 92.66 50.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 58.85 66.7 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.26 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.26 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2931 CRMSCA SECONDARY STRUCTURE . . 6.64 17 100.0 17 CRMSCA SURFACE . . . . . . . . 10.28 29 100.0 29 CRMSCA BURIED . . . . . . . . 10.16 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.34 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 6.76 85 100.0 85 CRMSMC SURFACE . . . . . . . . 10.32 143 100.0 143 CRMSMC BURIED . . . . . . . . 10.42 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.89 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 12.58 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 9.53 84 100.0 84 CRMSSC SURFACE . . . . . . . . 12.80 127 100.0 127 CRMSSC BURIED . . . . . . . . 13.27 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.65 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 8.35 152 100.0 152 CRMSALL SURFACE . . . . . . . . 11.57 243 100.0 243 CRMSALL BURIED . . . . . . . . 11.99 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.765 0.743 0.371 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 5.394 0.708 0.354 17 100.0 17 ERRCA SURFACE . . . . . . . . 7.666 0.737 0.369 29 100.0 29 ERRCA BURIED . . . . . . . . 8.241 0.769 0.384 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.882 0.740 0.370 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 5.459 0.702 0.351 85 100.0 85 ERRMC SURFACE . . . . . . . . 7.747 0.732 0.366 143 100.0 143 ERRMC BURIED . . . . . . . . 8.522 0.780 0.390 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.540 0.805 0.402 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 10.334 0.804 0.402 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 7.886 0.769 0.385 84 100.0 84 ERRSC SURFACE . . . . . . . . 10.330 0.799 0.400 127 100.0 127 ERRSC BURIED . . . . . . . . 11.460 0.830 0.415 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.173 0.772 0.386 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 6.738 0.738 0.369 152 100.0 152 ERRALL SURFACE . . . . . . . . 8.974 0.764 0.382 243 100.0 243 ERRALL BURIED . . . . . . . . 10.085 0.808 0.404 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 8 27 35 35 DISTCA CA (P) 0.00 0.00 2.86 22.86 77.14 35 DISTCA CA (RMS) 0.00 0.00 2.68 4.05 6.47 DISTCA ALL (N) 0 3 8 39 189 296 296 DISTALL ALL (P) 0.00 1.01 2.70 13.18 63.85 296 DISTALL ALL (RMS) 0.00 1.17 2.10 3.90 6.88 DISTALL END of the results output