####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS119_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS119_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.78 14.93 LONGEST_CONTINUOUS_SEGMENT: 18 26 - 43 4.63 14.85 LCS_AVERAGE: 44.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 30 - 38 1.82 19.78 LCS_AVERAGE: 19.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 12 - 18 0.96 16.19 LCS_AVERAGE: 14.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 7 7 13 3 7 7 8 8 8 9 10 10 10 11 12 14 15 15 16 17 18 19 21 LCS_GDT F 13 F 13 7 7 13 3 7 7 8 8 8 9 10 10 10 11 12 14 15 15 16 17 20 21 22 LCS_GDT H 14 H 14 7 7 13 3 7 7 8 8 8 9 10 10 10 11 12 14 15 17 19 21 23 25 26 LCS_GDT Y 15 Y 15 7 7 13 3 7 7 8 8 8 9 10 10 10 11 12 14 15 16 21 23 25 26 28 LCS_GDT T 16 T 16 7 7 13 3 7 7 8 8 8 9 10 10 10 12 15 17 17 20 22 23 25 27 28 LCS_GDT V 17 V 17 7 7 13 3 7 7 8 8 8 9 10 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT T 18 T 18 7 7 13 3 3 7 8 8 8 9 10 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT D 19 D 19 4 4 13 3 3 4 4 4 4 5 6 8 9 11 14 17 18 20 22 23 25 27 28 LCS_GDT I 20 I 20 4 4 13 3 3 4 4 4 4 7 10 10 10 11 12 14 15 16 19 22 25 27 28 LCS_GDT K 21 K 21 3 4 14 3 7 7 8 8 8 9 10 10 10 11 14 17 18 20 22 23 25 27 28 LCS_GDT D 22 D 22 3 4 14 3 3 4 5 6 6 9 9 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT L 23 L 23 3 3 14 3 3 4 5 6 7 8 9 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT T 24 T 24 3 3 15 1 3 4 5 6 6 8 9 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT K 25 K 25 5 6 18 1 3 5 6 6 6 7 9 12 13 14 15 17 18 20 22 23 25 27 28 LCS_GDT L 26 L 26 5 6 18 4 4 5 6 6 7 8 10 12 15 15 17 17 18 20 22 23 25 27 28 LCS_GDT G 27 G 27 5 6 18 4 4 5 6 6 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT A 28 A 28 5 6 18 4 4 5 6 6 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT I 29 I 29 5 8 18 4 5 5 6 6 10 12 14 14 15 16 17 17 17 20 22 23 25 27 28 LCS_GDT Y 30 Y 30 5 9 18 3 5 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT D 31 D 31 5 9 18 3 5 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT K 32 K 32 5 9 18 3 5 5 7 9 10 12 14 14 15 16 17 17 17 19 21 23 25 27 28 LCS_GDT T 33 T 33 5 9 18 3 5 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT K 34 K 34 5 9 18 3 4 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT K 35 K 35 5 9 18 3 4 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT Y 36 Y 36 5 9 18 3 4 5 7 9 10 12 14 14 15 16 17 17 17 19 22 22 24 25 27 LCS_GDT W 37 W 37 5 9 18 3 4 5 7 9 10 12 14 14 15 16 17 17 17 18 19 22 24 25 27 LCS_GDT V 38 V 38 5 9 18 3 4 5 7 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT Y 39 Y 39 4 8 18 3 4 4 7 7 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 LCS_GDT Q 40 Q 40 4 8 18 3 4 4 5 5 7 8 8 13 13 16 17 17 18 20 22 23 25 27 28 LCS_GDT G 41 G 41 6 8 18 4 6 6 7 7 10 12 14 14 15 16 17 17 17 18 19 22 25 27 28 LCS_GDT K 42 K 42 6 6 18 4 6 6 6 6 6 8 9 10 15 16 17 17 17 19 21 23 25 27 28 LCS_GDT P 43 P 43 6 6 18 4 6 6 6 6 6 7 7 7 8 9 9 12 17 18 21 23 25 27 28 LCS_GDT V 44 V 44 6 6 9 4 6 6 6 6 7 7 10 10 10 11 12 14 16 18 21 23 25 27 28 LCS_GDT M 45 M 45 6 6 9 3 6 6 6 6 6 7 7 8 9 9 11 13 16 18 21 23 25 27 28 LCS_GDT P 46 P 46 6 6 9 3 6 6 6 6 6 7 7 8 9 9 11 12 16 18 20 23 24 27 28 LCS_AVERAGE LCS_A: 26.23 ( 14.94 19.43 44.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 7 8 9 10 12 14 14 15 16 17 17 18 20 22 23 25 27 28 GDT PERCENT_AT 11.43 20.00 20.00 22.86 25.71 28.57 34.29 40.00 40.00 42.86 45.71 48.57 48.57 51.43 57.14 62.86 65.71 71.43 77.14 80.00 GDT RMS_LOCAL 0.22 0.58 0.58 0.90 1.82 2.08 2.56 2.81 2.81 3.29 3.66 3.94 3.94 5.18 5.45 5.73 6.06 6.65 6.88 7.03 GDT RMS_ALL_AT 15.52 16.94 16.94 16.46 19.78 19.97 17.42 17.88 17.88 17.11 16.56 15.95 15.95 10.68 10.68 10.52 10.27 10.35 10.02 9.95 # Checking swapping # possible swapping detected: D 19 D 19 # possible swapping detected: D 22 D 22 # possible swapping detected: Y 39 Y 39 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 21.848 0 0.561 1.210 28.004 0.000 0.000 LGA F 13 F 13 18.368 0 0.088 1.119 20.819 0.000 0.000 LGA H 14 H 14 20.050 0 0.130 1.241 21.846 0.000 0.000 LGA Y 15 Y 15 22.487 0 0.102 0.472 25.399 0.000 0.000 LGA T 16 T 16 25.998 0 0.038 0.088 27.175 0.000 0.000 LGA V 17 V 17 30.670 0 0.596 0.657 35.008 0.000 0.000 LGA T 18 T 18 31.157 0 0.608 0.550 31.572 0.000 0.000 LGA D 19 D 19 30.827 0 0.442 1.366 32.864 0.000 0.000 LGA I 20 I 20 31.054 0 0.566 0.704 33.940 0.000 0.000 LGA K 21 K 21 30.449 0 0.643 0.908 32.875 0.000 0.000 LGA D 22 D 22 25.521 0 0.653 1.211 29.306 0.000 0.000 LGA L 23 L 23 18.942 0 0.606 0.714 21.505 0.000 0.000 LGA T 24 T 24 17.096 0 0.631 0.588 20.413 0.000 0.000 LGA K 25 K 25 14.773 0 0.630 0.992 22.197 0.000 0.000 LGA L 26 L 26 8.220 0 0.661 1.153 10.540 9.762 7.976 LGA G 27 G 27 3.124 0 0.668 0.668 5.058 49.524 49.524 LGA A 28 A 28 3.061 0 0.098 0.127 4.857 67.500 60.286 LGA I 29 I 29 3.062 0 0.553 1.498 9.467 53.571 33.274 LGA Y 30 Y 30 1.596 0 0.155 0.879 8.529 66.905 44.603 LGA D 31 D 31 2.392 0 0.298 0.372 3.547 61.190 59.345 LGA K 32 K 32 3.476 0 0.578 0.904 5.719 41.190 37.143 LGA T 33 T 33 3.163 0 0.604 1.371 7.430 59.286 43.537 LGA K 34 K 34 1.599 0 0.716 0.907 7.651 79.405 50.476 LGA K 35 K 35 0.863 0 0.518 0.756 8.853 75.238 49.788 LGA Y 36 Y 36 2.320 0 0.107 1.166 9.036 62.976 38.095 LGA W 37 W 37 3.702 0 0.083 0.309 7.533 50.119 26.497 LGA V 38 V 38 2.764 0 0.112 0.883 5.196 53.571 53.129 LGA Y 39 Y 39 2.930 0 0.133 1.265 8.256 47.619 37.659 LGA Q 40 Q 40 6.514 0 0.501 0.428 15.136 20.714 9.365 LGA G 41 G 41 3.606 0 0.667 0.667 7.409 26.905 26.905 LGA K 42 K 42 10.200 0 0.052 0.495 17.455 2.500 1.111 LGA P 43 P 43 14.834 0 0.035 0.067 17.136 0.000 0.000 LGA V 44 V 44 18.883 0 0.056 0.079 22.351 0.000 0.000 LGA M 45 M 45 25.694 0 0.181 1.281 28.985 0.000 0.000 LGA P 46 P 46 30.912 0 0.038 0.095 33.033 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 9.446 9.375 11.032 23.656 17.963 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 14 2.81 36.429 31.386 0.481 LGA_LOCAL RMSD: 2.809 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.880 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 9.446 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.781255 * X + 0.538617 * Y + -0.315488 * Z + -136.383591 Y_new = 0.323586 * X + 0.781665 * Y + 0.533190 * Z + 18.987661 Z_new = 0.533791 * X + 0.314470 * Y + -0.784969 * Z + -5.144525 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.748915 -0.563078 2.760557 [DEG: 157.5013 -32.2620 158.1682 ] ZXZ: -2.607300 2.473442 1.038411 [DEG: -149.3873 141.7178 59.4966 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS119_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS119_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 14 2.81 31.386 9.45 REMARK ---------------------------------------------------------- MOLECULE T0548TS119_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT 3L2QA ATOM 106 N HIS 12 -36.930 -19.050 13.796 1.00 50.00 N ATOM 107 CA HIS 12 -36.777 -19.156 15.220 1.00 50.00 C ATOM 108 C HIS 12 -38.113 -19.201 15.882 1.00 50.00 C ATOM 109 O HIS 12 -38.247 -18.916 17.070 1.00 50.00 O ATOM 110 H HIS 12 -36.666 -19.727 13.264 1.00 50.00 H ATOM 111 CB HIS 12 -35.950 -17.987 15.758 1.00 50.00 C ATOM 112 CG HIS 12 -34.590 -17.875 15.142 1.00 50.00 C ATOM 113 ND1 HIS 12 -33.600 -18.812 15.347 1.00 50.00 N ATOM 114 CE1 HIS 12 -32.499 -18.441 14.669 1.00 50.00 C ATOM 115 CD2 HIS 12 -33.922 -16.923 14.265 1.00 50.00 C ATOM 116 HE2 HIS 12 -32.063 -16.868 13.487 1.00 50.00 H ATOM 117 NE2 HIS 12 -32.685 -17.309 14.018 1.00 50.00 N ATOM 118 N PHE 13 -39.145 -19.595 15.114 1.00 50.00 N ATOM 119 CA PHE 13 -40.433 -19.868 15.678 1.00 50.00 C ATOM 120 C PHE 13 -40.688 -21.275 15.264 1.00 50.00 C ATOM 121 O PHE 13 -40.368 -21.643 14.137 1.00 50.00 O ATOM 122 H PHE 13 -39.013 -19.685 14.229 1.00 50.00 H ATOM 123 CB PHE 13 -41.466 -18.863 15.166 1.00 50.00 C ATOM 124 CG PHE 13 -41.199 -17.448 15.593 1.00 50.00 C ATOM 125 CZ PHE 13 -40.708 -14.830 16.389 1.00 50.00 C ATOM 126 CD1 PHE 13 -40.354 -16.635 14.857 1.00 50.00 C ATOM 127 CE1 PHE 13 -40.108 -15.333 15.251 1.00 50.00 C ATOM 128 CD2 PHE 13 -41.793 -16.929 16.730 1.00 50.00 C ATOM 129 CE2 PHE 13 -41.547 -15.627 17.124 1.00 50.00 C ATOM 130 N HIS 14 -41.238 -22.117 16.157 1.00 50.00 N ATOM 131 CA HIS 14 -41.449 -23.471 15.739 1.00 50.00 C ATOM 132 C HIS 14 -42.737 -23.538 14.992 1.00 50.00 C ATOM 133 O HIS 14 -43.673 -22.792 15.270 1.00 50.00 O ATOM 134 H HIS 14 -41.471 -21.861 16.988 1.00 50.00 H ATOM 135 CB HIS 14 -41.451 -24.411 16.946 1.00 50.00 C ATOM 136 CG HIS 14 -40.125 -24.515 17.633 1.00 50.00 C ATOM 137 ND1 HIS 14 -39.074 -25.241 17.117 1.00 50.00 N ATOM 138 CE1 HIS 14 -38.024 -25.146 17.952 1.00 50.00 C ATOM 139 CD2 HIS 14 -39.550 -23.992 18.864 1.00 50.00 C ATOM 140 HE2 HIS 14 -37.728 -24.196 19.705 1.00 50.00 H ATOM 141 NE2 HIS 14 -38.302 -24.398 19.003 1.00 50.00 N ATOM 142 N TYR 15 -42.802 -24.430 13.989 1.00 50.00 N ATOM 143 CA TYR 15 -44.024 -24.614 13.270 1.00 50.00 C ATOM 144 C TYR 15 -44.418 -26.033 13.500 1.00 50.00 C ATOM 145 O TYR 15 -43.641 -26.950 13.242 1.00 50.00 O ATOM 146 H TYR 15 -42.075 -24.913 13.770 1.00 50.00 H ATOM 147 CB TYR 15 -43.830 -24.283 11.789 1.00 50.00 C ATOM 148 CG TYR 15 -43.481 -22.835 11.526 1.00 50.00 C ATOM 149 HH TYR 15 -41.783 -18.681 11.169 1.00 50.00 H ATOM 150 OH TYR 15 -42.511 -18.856 10.811 1.00 50.00 O ATOM 151 CZ TYR 15 -42.834 -20.172 11.047 1.00 50.00 C ATOM 152 CD1 TYR 15 -42.306 -22.285 12.020 1.00 50.00 C ATOM 153 CE1 TYR 15 -41.979 -20.963 11.784 1.00 50.00 C ATOM 154 CD2 TYR 15 -44.330 -22.023 10.784 1.00 50.00 C ATOM 155 CE2 TYR 15 -44.021 -20.699 10.539 1.00 50.00 C ATOM 156 N THR 16 -45.646 -26.251 14.009 1.00 50.00 N ATOM 157 CA THR 16 -46.071 -27.589 14.287 1.00 50.00 C ATOM 158 C THR 16 -47.356 -27.820 13.568 1.00 50.00 C ATOM 159 O THR 16 -48.009 -26.878 13.124 1.00 50.00 O ATOM 160 H THR 16 -46.198 -25.559 14.174 1.00 50.00 H ATOM 161 CB THR 16 -46.232 -27.827 15.800 1.00 50.00 C ATOM 162 HG1 THR 16 -47.977 -27.143 15.931 1.00 50.00 H ATOM 163 OG1 THR 16 -47.261 -26.974 16.315 1.00 50.00 O ATOM 164 CG2 THR 16 -44.933 -27.516 16.529 1.00 50.00 C ATOM 165 N VAL 17 -47.747 -29.102 13.415 1.00 50.00 N ATOM 166 CA VAL 17 -48.964 -29.378 12.714 1.00 50.00 C ATOM 167 C VAL 17 -49.823 -30.237 13.579 1.00 50.00 C ATOM 168 O VAL 17 -49.341 -31.161 14.231 1.00 50.00 O ATOM 169 H VAL 17 -47.254 -29.778 13.746 1.00 50.00 H ATOM 170 CB VAL 17 -48.692 -30.051 11.356 1.00 50.00 C ATOM 171 CG1 VAL 17 -50.001 -30.388 10.658 1.00 50.00 C ATOM 172 CG2 VAL 17 -47.832 -29.154 10.480 1.00 50.00 C ATOM 173 N THR 18 -51.129 -29.911 13.633 1.00 50.00 N ATOM 174 CA THR 18 -52.061 -30.718 14.359 1.00 50.00 C ATOM 175 C THR 18 -53.350 -30.686 13.597 1.00 50.00 C ATOM 176 O THR 18 -53.738 -29.638 13.080 1.00 50.00 O ATOM 177 H THR 18 -51.412 -29.174 13.203 1.00 50.00 H ATOM 178 CB THR 18 -52.241 -30.211 15.803 1.00 50.00 C ATOM 179 HG1 THR 18 -50.447 -29.725 16.074 1.00 50.00 H ATOM 180 OG1 THR 18 -50.977 -30.220 16.477 1.00 50.00 O ATOM 181 CG2 THR 18 -53.206 -31.107 16.566 1.00 50.00 C ATOM 182 N ASP 19 -54.027 -31.854 13.502 1.00 50.00 N ATOM 183 CA ASP 19 -55.301 -31.984 12.847 1.00 50.00 C ATOM 184 C ASP 19 -55.216 -31.322 11.520 1.00 50.00 C ATOM 185 O ASP 19 -56.157 -30.642 11.112 1.00 50.00 O ATOM 186 H ASP 19 -53.638 -32.575 13.877 1.00 50.00 H ATOM 187 CB ASP 19 -56.411 -31.377 13.708 1.00 50.00 C ATOM 188 CG ASP 19 -57.796 -31.789 13.250 1.00 50.00 C ATOM 189 OD1 ASP 19 -57.923 -32.877 12.650 1.00 50.00 O ATOM 190 OD2 ASP 19 -58.753 -31.024 13.490 1.00 50.00 O ATOM 191 N ILE 20 -54.106 -31.600 10.806 1.00 50.00 N ATOM 192 CA ILE 20 -53.682 -30.934 9.608 1.00 50.00 C ATOM 193 C ILE 20 -54.171 -29.521 9.629 1.00 50.00 C ATOM 194 O ILE 20 -55.285 -29.198 9.220 1.00 50.00 O ATOM 195 H ILE 20 -53.612 -32.271 11.147 1.00 50.00 H ATOM 196 CB ILE 20 -54.179 -31.667 8.349 1.00 50.00 C ATOM 197 CD1 ILE 20 -52.174 -33.241 8.342 1.00 50.00 C ATOM 198 CG1 ILE 20 -53.681 -33.114 8.343 1.00 50.00 C ATOM 199 CG2 ILE 20 -53.758 -30.918 7.094 1.00 50.00 C ATOM 200 N LYS 21 -53.282 -28.641 10.109 1.00 50.00 N ATOM 201 CA LYS 21 -53.491 -27.233 10.220 1.00 50.00 C ATOM 202 C LYS 21 -52.153 -26.749 10.649 1.00 50.00 C ATOM 203 O LYS 21 -51.570 -27.313 11.572 1.00 50.00 O ATOM 204 H LYS 21 -52.502 -29.002 10.374 1.00 50.00 H ATOM 205 CB LYS 21 -54.625 -26.935 11.204 1.00 50.00 C ATOM 206 CD LYS 21 -56.183 -25.250 12.220 1.00 50.00 C ATOM 207 CE LYS 21 -56.558 -23.780 12.306 1.00 50.00 C ATOM 208 CG LYS 21 -54.993 -25.463 11.299 1.00 50.00 C ATOM 209 HZ1 LYS 21 -57.914 -22.687 13.236 1.00 50.00 H ATOM 210 HZ2 LYS 21 -57.520 -23.840 14.028 1.00 50.00 H ATOM 211 HZ3 LYS 21 -58.425 -24.006 12.904 1.00 50.00 H ATOM 212 NZ LYS 21 -57.721 -23.556 13.209 1.00 50.00 N ATOM 213 N ASP 22 -51.603 -25.712 9.998 1.00 50.00 N ATOM 214 CA ASP 22 -50.303 -25.312 10.444 1.00 50.00 C ATOM 215 C ASP 22 -50.490 -24.454 11.655 1.00 50.00 C ATOM 216 O ASP 22 -51.429 -23.662 11.729 1.00 50.00 O ATOM 217 H ASP 22 -52.001 -25.274 9.321 1.00 50.00 H ATOM 218 CB ASP 22 -49.557 -24.578 9.328 1.00 50.00 C ATOM 219 CG ASP 22 -49.160 -25.497 8.189 1.00 50.00 C ATOM 220 OD1 ASP 22 -49.150 -26.728 8.396 1.00 50.00 O ATOM 221 OD2 ASP 22 -48.860 -24.985 7.090 1.00 50.00 O ATOM 222 N LEU 23 -49.595 -24.603 12.648 1.00 50.00 N ATOM 223 CA LEU 23 -49.687 -23.843 13.858 1.00 50.00 C ATOM 224 C LEU 23 -48.358 -23.189 14.062 1.00 50.00 C ATOM 225 O LEU 23 -47.322 -23.745 13.703 1.00 50.00 O ATOM 226 H LEU 23 -48.926 -25.197 12.540 1.00 50.00 H ATOM 227 CB LEU 23 -50.077 -24.745 15.030 1.00 50.00 C ATOM 228 CG LEU 23 -51.431 -25.450 14.923 1.00 50.00 C ATOM 229 CD1 LEU 23 -51.610 -26.449 16.054 1.00 50.00 C ATOM 230 CD2 LEU 23 -52.565 -24.437 14.927 1.00 50.00 C ATOM 231 N THR 24 -48.357 -21.971 14.634 1.00 50.00 N ATOM 232 CA THR 24 -47.119 -21.299 14.890 1.00 50.00 C ATOM 233 C THR 24 -47.157 -20.786 16.292 1.00 50.00 C ATOM 234 O THR 24 -48.217 -20.452 16.819 1.00 50.00 O ATOM 235 H THR 24 -49.137 -21.580 14.856 1.00 50.00 H ATOM 236 CB THR 24 -46.880 -20.155 13.887 1.00 50.00 C ATOM 237 HG1 THR 24 -48.652 -19.530 13.863 1.00 50.00 H ATOM 238 OG1 THR 24 -47.917 -19.176 14.018 1.00 50.00 O ATOM 239 CG2 THR 24 -46.891 -20.687 12.461 1.00 50.00 C ATOM 240 N LYS 25 -45.982 -20.715 16.946 1.00 50.00 N ATOM 241 CA LYS 25 -45.963 -20.222 18.290 1.00 50.00 C ATOM 242 C LYS 25 -45.359 -18.859 18.239 1.00 50.00 C ATOM 243 O LYS 25 -44.205 -18.702 17.844 1.00 50.00 O ATOM 244 H LYS 25 -45.216 -20.973 16.550 1.00 50.00 H ATOM 245 CB LYS 25 -45.180 -21.172 19.199 1.00 50.00 C ATOM 246 CD LYS 25 -44.987 -23.435 20.265 1.00 50.00 C ATOM 247 CE LYS 25 -45.591 -24.826 20.376 1.00 50.00 C ATOM 248 CG LYS 25 -45.810 -22.548 19.346 1.00 50.00 C ATOM 249 HZ1 LYS 25 -45.152 -26.523 21.283 1.00 50.00 H ATOM 250 HZ2 LYS 25 -44.716 -25.374 22.059 1.00 50.00 H ATOM 251 HZ3 LYS 25 -43.954 -25.798 20.896 1.00 50.00 H ATOM 252 NZ LYS 25 -44.771 -25.720 21.240 1.00 50.00 N ATOM 253 N LEU 26 -46.142 -17.829 18.618 1.00 50.00 N ATOM 254 CA LEU 26 -45.616 -16.499 18.583 1.00 50.00 C ATOM 255 C LEU 26 -46.237 -15.681 19.662 1.00 50.00 C ATOM 256 O LEU 26 -47.421 -15.813 19.961 1.00 50.00 O ATOM 257 H LEU 26 -46.987 -17.972 18.891 1.00 50.00 H ATOM 258 CB LEU 26 -45.859 -15.862 17.213 1.00 50.00 C ATOM 259 CG LEU 26 -45.282 -14.461 17.004 1.00 50.00 C ATOM 260 CD1 LEU 26 -44.968 -14.221 15.535 1.00 50.00 C ATOM 261 CD2 LEU 26 -46.246 -13.402 17.519 1.00 50.00 C ATOM 262 N GLY 27 -45.408 -14.828 20.293 1.00 50.00 N ATOM 263 CA GLY 27 -45.861 -13.867 21.252 1.00 50.00 C ATOM 264 C GLY 27 -46.696 -14.549 22.277 1.00 50.00 C ATOM 265 O GLY 27 -46.384 -15.652 22.721 1.00 50.00 O ATOM 266 H GLY 27 -44.533 -14.882 20.089 1.00 50.00 H ATOM 267 N ALA 28 -47.818 -13.890 22.627 1.00 50.00 N ATOM 268 CA ALA 28 -48.725 -14.328 23.644 1.00 50.00 C ATOM 269 C ALA 28 -47.977 -14.253 24.930 1.00 50.00 C ATOM 270 O ALA 28 -46.841 -14.712 25.022 1.00 50.00 O ATOM 271 H ALA 28 -47.982 -13.129 22.175 1.00 50.00 H ATOM 272 CB ALA 28 -49.228 -15.730 23.339 1.00 50.00 C ATOM 273 N ILE 29 -48.587 -13.652 25.967 1.00 50.00 N ATOM 274 CA ILE 29 -47.844 -13.512 27.183 1.00 50.00 C ATOM 275 C ILE 29 -47.621 -14.867 27.764 1.00 50.00 C ATOM 276 O ILE 29 -46.487 -15.250 28.043 1.00 50.00 O ATOM 277 H ILE 29 -49.431 -13.344 25.918 1.00 50.00 H ATOM 278 CB ILE 29 -48.566 -12.590 28.183 1.00 50.00 C ATOM 279 CD1 ILE 29 -49.529 -10.243 28.429 1.00 50.00 C ATOM 280 CG1 ILE 29 -48.606 -11.155 27.652 1.00 50.00 C ATOM 281 CG2 ILE 29 -47.909 -12.670 29.552 1.00 50.00 C ATOM 282 N TYR 30 -48.707 -15.636 27.956 1.00 50.00 N ATOM 283 CA TYR 30 -48.557 -16.969 28.457 1.00 50.00 C ATOM 284 C TYR 30 -49.707 -17.768 27.960 1.00 50.00 C ATOM 285 O TYR 30 -50.749 -17.223 27.604 1.00 50.00 O ATOM 286 H TYR 30 -49.527 -15.315 27.770 1.00 50.00 H ATOM 287 CB TYR 30 -48.482 -16.962 29.985 1.00 50.00 C ATOM 288 CG TYR 30 -49.753 -16.492 30.658 1.00 50.00 C ATOM 289 HH TYR 30 -53.727 -15.876 32.681 1.00 50.00 H ATOM 290 OH TYR 30 -53.252 -15.217 32.508 1.00 50.00 O ATOM 291 CZ TYR 30 -52.094 -15.637 31.895 1.00 50.00 C ATOM 292 CD1 TYR 30 -50.725 -17.401 31.054 1.00 50.00 C ATOM 293 CE1 TYR 30 -51.890 -16.981 31.670 1.00 50.00 C ATOM 294 CD2 TYR 30 -49.976 -15.141 30.893 1.00 50.00 C ATOM 295 CE2 TYR 30 -51.134 -14.703 31.507 1.00 50.00 C ATOM 296 N ASP 31 -49.530 -19.100 27.911 1.00 50.00 N ATOM 297 CA ASP 31 -50.588 -19.964 27.489 1.00 50.00 C ATOM 298 C ASP 31 -51.388 -20.289 28.700 1.00 50.00 C ATOM 299 O ASP 31 -50.975 -20.015 29.826 1.00 50.00 O ATOM 300 H ASP 31 -48.733 -19.447 28.148 1.00 50.00 H ATOM 301 CB ASP 31 -50.022 -21.214 26.812 1.00 50.00 C ATOM 302 CG ASP 31 -51.041 -21.914 25.936 1.00 50.00 C ATOM 303 OD1 ASP 31 -52.210 -21.474 25.916 1.00 50.00 O ATOM 304 OD2 ASP 31 -50.672 -22.903 25.268 1.00 50.00 O ATOM 305 N LYS 32 -52.586 -20.861 28.490 1.00 50.00 N ATOM 306 CA LYS 32 -53.332 -21.347 29.607 1.00 50.00 C ATOM 307 C LYS 32 -53.267 -22.830 29.452 1.00 50.00 C ATOM 308 O LYS 32 -54.131 -23.433 28.818 1.00 50.00 O ATOM 309 H LYS 32 -52.920 -20.940 27.658 1.00 50.00 H ATOM 310 CB LYS 32 -54.753 -20.780 29.591 1.00 50.00 C ATOM 311 CD LYS 32 -56.259 -18.778 29.744 1.00 50.00 C ATOM 312 CE LYS 32 -56.327 -17.268 29.902 1.00 50.00 C ATOM 313 CG LYS 32 -54.821 -19.272 29.763 1.00 50.00 C ATOM 314 HZ1 LYS 32 -57.733 -15.888 30.003 1.00 50.00 H ATOM 315 HZ2 LYS 32 -58.173 -17.144 30.586 1.00 50.00 H ATOM 316 HZ3 LYS 32 -58.127 -16.990 29.143 1.00 50.00 H ATOM 317 NZ LYS 32 -57.731 -16.773 29.909 1.00 50.00 N ATOM 318 N THR 33 -52.224 -23.461 30.022 1.00 50.00 N ATOM 319 CA THR 33 -52.055 -24.874 29.849 1.00 50.00 C ATOM 320 C THR 33 -51.375 -25.385 31.073 1.00 50.00 C ATOM 321 O THR 33 -51.440 -24.773 32.138 1.00 50.00 O ATOM 322 H THR 33 -51.632 -22.993 30.513 1.00 50.00 H ATOM 323 CB THR 33 -51.248 -25.195 28.577 1.00 50.00 C ATOM 324 HG1 THR 33 -52.075 -26.844 28.220 1.00 50.00 H ATOM 325 OG1 THR 33 -51.287 -26.604 28.325 1.00 50.00 O ATOM 326 CG2 THR 33 -49.798 -24.770 28.746 1.00 50.00 C ATOM 327 N LYS 34 -50.711 -26.548 30.945 1.00 50.00 N ATOM 328 CA LYS 34 -50.004 -27.077 32.069 1.00 50.00 C ATOM 329 C LYS 34 -48.998 -26.039 32.423 1.00 50.00 C ATOM 330 O LYS 34 -48.541 -25.287 31.563 1.00 50.00 O ATOM 331 H LYS 34 -50.708 -26.993 30.162 1.00 50.00 H ATOM 332 CB LYS 34 -49.377 -28.428 31.721 1.00 50.00 C ATOM 333 CD LYS 34 -49.698 -30.856 31.170 1.00 50.00 C ATOM 334 CE LYS 34 -50.709 -31.963 30.916 1.00 50.00 C ATOM 335 CG LYS 34 -50.388 -29.536 31.471 1.00 50.00 C ATOM 336 HZ1 LYS 34 -50.666 -33.881 30.456 1.00 50.00 H ATOM 337 HZ2 LYS 34 -49.531 -33.503 31.281 1.00 50.00 H ATOM 338 HZ3 LYS 34 -49.547 -33.164 29.868 1.00 50.00 H ATOM 339 NZ LYS 34 -50.046 -33.257 30.598 1.00 50.00 N ATOM 340 N LYS 35 -48.641 -25.953 33.716 1.00 50.00 N ATOM 341 CA LYS 35 -47.744 -24.909 34.109 1.00 50.00 C ATOM 342 C LYS 35 -46.376 -25.241 33.608 1.00 50.00 C ATOM 343 O LYS 35 -45.625 -25.976 34.248 1.00 50.00 O ATOM 344 H LYS 35 -48.952 -26.534 34.330 1.00 50.00 H ATOM 345 CB LYS 35 -47.756 -24.738 35.629 1.00 50.00 C ATOM 346 CD LYS 35 -47.009 -23.432 37.639 1.00 50.00 C ATOM 347 CE LYS 35 -46.161 -22.274 38.139 1.00 50.00 C ATOM 348 CG LYS 35 -46.907 -23.579 36.130 1.00 50.00 C ATOM 349 HZ1 LYS 35 -45.743 -21.433 39.875 1.00 50.00 H ATOM 350 HZ2 LYS 35 -45.965 -22.863 40.012 1.00 50.00 H ATOM 351 HZ3 LYS 35 -47.096 -21.965 39.849 1.00 50.00 H ATOM 352 NZ LYS 35 -46.250 -22.118 39.618 1.00 50.00 N ATOM 353 N TYR 36 -46.031 -24.707 32.421 1.00 50.00 N ATOM 354 CA TYR 36 -44.722 -24.871 31.859 1.00 50.00 C ATOM 355 C TYR 36 -44.437 -23.653 31.042 1.00 50.00 C ATOM 356 O TYR 36 -45.324 -22.837 30.800 1.00 50.00 O ATOM 357 H TYR 36 -46.655 -24.233 31.978 1.00 50.00 H ATOM 358 CB TYR 36 -44.653 -26.154 31.028 1.00 50.00 C ATOM 359 CG TYR 36 -44.938 -27.411 31.817 1.00 50.00 C ATOM 360 HH TYR 36 -46.550 -31.034 33.948 1.00 50.00 H ATOM 361 OH TYR 36 -45.738 -30.869 33.984 1.00 50.00 O ATOM 362 CZ TYR 36 -45.472 -29.725 33.268 1.00 50.00 C ATOM 363 CD1 TYR 36 -46.230 -27.911 31.918 1.00 50.00 C ATOM 364 CE1 TYR 36 -46.500 -29.059 32.636 1.00 50.00 C ATOM 365 CD2 TYR 36 -43.914 -28.096 32.459 1.00 50.00 C ATOM 366 CE2 TYR 36 -44.165 -29.246 33.183 1.00 50.00 C ATOM 367 N TRP 37 -43.172 -23.486 30.611 1.00 50.00 N ATOM 368 CA TRP 37 -42.831 -22.370 29.780 1.00 50.00 C ATOM 369 C TRP 37 -43.452 -22.604 28.443 1.00 50.00 C ATOM 370 O TRP 37 -43.308 -23.681 27.866 1.00 50.00 O ATOM 371 H TRP 37 -42.539 -24.081 30.849 1.00 50.00 H ATOM 372 CB TRP 37 -41.312 -22.215 29.689 1.00 50.00 C ATOM 373 HB2 TRP 37 -41.048 -21.322 29.235 1.00 50.00 H ATOM 374 HB3 TRP 37 -40.790 -23.065 29.618 1.00 50.00 H ATOM 375 CG TRP 37 -40.675 -21.780 30.973 1.00 50.00 C ATOM 376 CD1 TRP 37 -39.987 -22.564 31.853 1.00 50.00 C ATOM 377 HE1 TRP 37 -39.057 -22.141 33.643 1.00 50.00 H ATOM 378 NE1 TRP 37 -39.550 -21.813 32.918 1.00 50.00 N ATOM 379 CD2 TRP 37 -40.668 -20.457 31.524 1.00 50.00 C ATOM 380 CE2 TRP 37 -39.958 -20.514 32.736 1.00 50.00 C ATOM 381 CH2 TRP 37 -40.282 -18.205 33.108 1.00 50.00 C ATOM 382 CZ2 TRP 37 -39.758 -19.392 33.539 1.00 50.00 C ATOM 383 CE3 TRP 37 -41.192 -19.229 31.107 1.00 50.00 C ATOM 384 CZ3 TRP 37 -40.992 -18.120 31.906 1.00 50.00 C ATOM 385 N VAL 38 -44.182 -21.593 27.922 1.00 50.00 N ATOM 386 CA VAL 38 -44.824 -21.759 26.652 1.00 50.00 C ATOM 387 C VAL 38 -45.130 -20.401 26.102 1.00 50.00 C ATOM 388 O VAL 38 -45.087 -19.399 26.812 1.00 50.00 O ATOM 389 H VAL 38 -44.265 -20.817 28.371 1.00 50.00 H ATOM 390 CB VAL 38 -46.098 -22.617 26.771 1.00 50.00 C ATOM 391 CG1 VAL 38 -47.144 -21.901 27.611 1.00 50.00 C ATOM 392 CG2 VAL 38 -46.649 -22.945 25.393 1.00 50.00 C ATOM 393 N TYR 39 -45.428 -20.356 24.788 1.00 50.00 N ATOM 394 CA TYR 39 -45.882 -19.172 24.116 1.00 50.00 C ATOM 395 C TYR 39 -47.172 -19.591 23.499 1.00 50.00 C ATOM 396 O TYR 39 -47.370 -20.777 23.237 1.00 50.00 O ATOM 397 H TYR 39 -45.328 -21.124 24.329 1.00 50.00 H ATOM 398 CB TYR 39 -44.836 -18.695 23.106 1.00 50.00 C ATOM 399 CG TYR 39 -43.530 -18.265 23.735 1.00 50.00 C ATOM 400 HH TYR 39 -39.442 -17.761 25.550 1.00 50.00 H ATOM 401 OH TYR 39 -39.932 -17.097 25.462 1.00 50.00 O ATOM 402 CZ TYR 39 -41.123 -17.482 24.890 1.00 50.00 C ATOM 403 CD1 TYR 39 -42.526 -19.190 23.992 1.00 50.00 C ATOM 404 CE1 TYR 39 -41.329 -18.805 24.566 1.00 50.00 C ATOM 405 CD2 TYR 39 -43.305 -16.934 24.067 1.00 50.00 C ATOM 406 CE2 TYR 39 -42.114 -16.533 24.642 1.00 50.00 C ATOM 407 N GLN 40 -48.115 -18.653 23.277 1.00 50.00 N ATOM 408 CA GLN 40 -49.341 -19.122 22.705 1.00 50.00 C ATOM 409 C GLN 40 -49.223 -19.048 21.223 1.00 50.00 C ATOM 410 O GLN 40 -48.569 -18.167 20.669 1.00 50.00 O ATOM 411 H GLN 40 -48.012 -17.779 23.464 1.00 50.00 H ATOM 412 CB GLN 40 -50.522 -18.296 23.219 1.00 50.00 C ATOM 413 CD GLN 40 -51.938 -17.588 25.187 1.00 50.00 C ATOM 414 CG GLN 40 -50.767 -18.427 24.714 1.00 50.00 C ATOM 415 OE1 GLN 40 -52.146 -16.472 24.714 1.00 50.00 O ATOM 416 HE21 GLN 40 -53.417 -17.670 26.443 1.00 50.00 H ATOM 417 HE22 GLN 40 -52.521 -18.946 26.447 1.00 50.00 H ATOM 418 NE2 GLN 40 -52.708 -18.125 26.127 1.00 50.00 N ATOM 419 N GLY 41 -49.866 -20.001 20.530 1.00 50.00 N ATOM 420 CA GLY 41 -49.698 -20.035 19.114 1.00 50.00 C ATOM 421 C GLY 41 -51.000 -19.741 18.456 1.00 50.00 C ATOM 422 O GLY 41 -52.068 -19.821 19.061 1.00 50.00 O ATOM 423 H GLY 41 -50.391 -20.608 20.936 1.00 50.00 H ATOM 424 N LYS 42 -50.918 -19.379 17.165 1.00 50.00 N ATOM 425 CA LYS 42 -52.080 -19.074 16.397 1.00 50.00 C ATOM 426 C LYS 42 -52.027 -19.963 15.200 1.00 50.00 C ATOM 427 O LYS 42 -50.951 -20.347 14.741 1.00 50.00 O ATOM 428 H LYS 42 -50.102 -19.332 16.787 1.00 50.00 H ATOM 429 CB LYS 42 -52.106 -17.589 16.031 1.00 50.00 C ATOM 430 CD LYS 42 -52.348 -15.206 16.783 1.00 50.00 C ATOM 431 CE LYS 42 -52.447 -14.272 17.977 1.00 50.00 C ATOM 432 CG LYS 42 -52.262 -16.658 17.222 1.00 50.00 C ATOM 433 HZ1 LYS 42 -53.745 -13.902 19.417 1.00 50.00 H ATOM 434 HZ2 LYS 42 -53.766 -15.300 19.025 1.00 50.00 H ATOM 435 HZ3 LYS 42 -54.410 -14.301 18.189 1.00 50.00 H ATOM 436 NZ LYS 42 -53.720 -14.463 18.727 1.00 50.00 N ATOM 437 N PRO 43 -53.171 -20.342 14.705 1.00 50.00 N ATOM 438 CA PRO 43 -53.147 -21.156 13.525 1.00 50.00 C ATOM 439 C PRO 43 -52.846 -20.318 12.330 1.00 50.00 C ATOM 440 O PRO 43 -53.230 -19.151 12.310 1.00 50.00 O ATOM 441 CB PRO 43 -54.552 -21.757 13.462 1.00 50.00 C ATOM 442 CD PRO 43 -54.482 -20.365 15.407 1.00 50.00 C ATOM 443 CG PRO 43 -55.077 -21.629 14.852 1.00 50.00 C ATOM 444 N VAL 44 -52.146 -20.880 11.330 1.00 50.00 N ATOM 445 CA VAL 44 -51.930 -20.123 10.137 1.00 50.00 C ATOM 446 C VAL 44 -52.723 -20.810 9.073 1.00 50.00 C ATOM 447 O VAL 44 -52.578 -22.006 8.829 1.00 50.00 O ATOM 448 H VAL 44 -51.816 -21.715 11.399 1.00 50.00 H ATOM 449 CB VAL 44 -50.432 -20.028 9.793 1.00 50.00 C ATOM 450 CG1 VAL 44 -50.230 -19.250 8.501 1.00 50.00 C ATOM 451 CG2 VAL 44 -49.663 -19.380 10.935 1.00 50.00 C ATOM 452 N MET 45 -53.635 -20.073 8.424 1.00 50.00 N ATOM 453 CA MET 45 -54.447 -20.687 7.417 1.00 50.00 C ATOM 454 C MET 45 -53.757 -20.586 6.093 1.00 50.00 C ATOM 455 O MET 45 -52.790 -19.845 5.917 1.00 50.00 O ATOM 456 H MET 45 -53.741 -19.200 8.616 1.00 50.00 H ATOM 457 CB MET 45 -55.828 -20.031 7.368 1.00 50.00 C ATOM 458 SD MET 45 -56.958 -21.791 9.185 1.00 50.00 S ATOM 459 CE MET 45 -58.208 -22.243 7.986 1.00 50.00 C ATOM 460 CG MET 45 -56.595 -20.099 8.679 1.00 50.00 C ATOM 461 N PRO 46 -54.246 -21.369 5.167 1.00 50.00 N ATOM 462 CA PRO 46 -53.686 -21.390 3.841 1.00 50.00 C ATOM 463 C PRO 46 -54.018 -20.137 3.095 1.00 50.00 C ATOM 464 O PRO 46 -54.936 -19.425 3.495 1.00 50.00 O ATOM 465 CB PRO 46 -54.326 -22.618 3.189 1.00 50.00 C ATOM 466 CD PRO 46 -55.199 -22.467 5.413 1.00 50.00 C ATOM 467 CG PRO 46 -54.810 -23.440 4.336 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 95.31 35.3 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 101.23 26.5 34 100.0 34 ARMSMC SURFACE . . . . . . . . 100.08 28.6 56 100.0 56 ARMSMC BURIED . . . . . . . . 68.75 66.7 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.57 59.4 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 74.00 58.6 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 66.76 58.8 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 76.66 55.6 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 44.40 80.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.53 60.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 51.28 61.9 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 50.01 69.2 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 59.48 59.1 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 40.45 66.7 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 42.55 87.5 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 44.73 85.7 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 83.09 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 42.55 87.5 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.14 66.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 71.14 66.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 90.19 50.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 71.14 66.7 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.45 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.45 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2699 CRMSCA SECONDARY STRUCTURE . . 8.43 17 100.0 17 CRMSCA SURFACE . . . . . . . . 9.75 29 100.0 29 CRMSCA BURIED . . . . . . . . 7.81 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.51 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 8.58 85 100.0 85 CRMSMC SURFACE . . . . . . . . 9.80 143 100.0 143 CRMSMC BURIED . . . . . . . . 7.98 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.48 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 12.02 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 11.23 84 100.0 84 CRMSSC SURFACE . . . . . . . . 12.81 127 100.0 127 CRMSSC BURIED . . . . . . . . 10.91 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.12 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 10.09 152 100.0 152 CRMSALL SURFACE . . . . . . . . 11.41 243 100.0 243 CRMSALL BURIED . . . . . . . . 9.68 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.405 0.714 0.753 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 41.919 0.725 0.760 17 100.0 17 ERRCA SURFACE . . . . . . . . 41.208 0.709 0.750 29 100.0 29 ERRCA BURIED . . . . . . . . 42.358 0.736 0.768 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.341 0.712 0.751 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 41.812 0.722 0.758 85 100.0 85 ERRMC SURFACE . . . . . . . . 41.155 0.707 0.748 143 100.0 143 ERRMC BURIED . . . . . . . . 42.227 0.733 0.765 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 38.576 0.638 0.694 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 38.795 0.642 0.700 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 39.487 0.660 0.713 84 100.0 84 ERRSC SURFACE . . . . . . . . 38.343 0.633 0.690 127 100.0 127 ERRSC BURIED . . . . . . . . 39.599 0.661 0.712 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 39.938 0.674 0.722 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 40.544 0.688 0.733 152 100.0 152 ERRALL SURFACE . . . . . . . . 39.750 0.670 0.719 243 100.0 243 ERRALL BURIED . . . . . . . . 40.796 0.693 0.736 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 4 27 35 35 DISTCA CA (P) 0.00 0.00 2.86 11.43 77.14 35 DISTCA CA (RMS) 0.00 0.00 2.66 3.95 7.26 DISTCA ALL (N) 0 1 6 26 174 296 296 DISTALL ALL (P) 0.00 0.34 2.03 8.78 58.78 296 DISTALL ALL (RMS) 0.00 1.74 2.54 3.99 7.26 DISTALL END of the results output