####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS102_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS102_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 16 - 33 5.00 10.40 LONGEST_CONTINUOUS_SEGMENT: 18 17 - 34 4.85 10.64 LONGEST_CONTINUOUS_SEGMENT: 18 21 - 38 4.76 11.69 LONGEST_CONTINUOUS_SEGMENT: 18 22 - 39 4.86 11.52 LONGEST_CONTINUOUS_SEGMENT: 18 23 - 40 5.00 11.95 LCS_AVERAGE: 46.45 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 33 - 40 1.93 19.38 LONGEST_CONTINUOUS_SEGMENT: 8 34 - 41 1.74 19.39 LCS_AVERAGE: 17.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 12 - 18 0.98 17.23 LCS_AVERAGE: 13.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 7 7 13 3 7 7 8 8 8 9 9 10 10 11 12 13 15 15 16 17 18 18 20 LCS_GDT F 13 F 13 7 7 13 3 7 7 8 8 8 9 9 10 10 11 12 13 15 15 17 17 18 18 21 LCS_GDT H 14 H 14 7 7 13 3 7 7 8 8 8 9 9 10 10 11 12 13 15 16 18 18 20 22 23 LCS_GDT Y 15 Y 15 7 7 13 3 7 7 8 8 8 9 9 10 10 11 12 13 16 17 19 21 22 23 25 LCS_GDT T 16 T 16 7 7 18 3 7 7 8 8 8 9 9 11 12 13 15 18 18 21 21 22 23 24 26 LCS_GDT V 17 V 17 7 7 18 3 7 7 8 8 8 9 11 13 14 15 16 18 19 21 21 22 23 25 26 LCS_GDT T 18 T 18 7 7 18 3 5 7 8 9 9 9 11 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT D 19 D 19 3 5 18 3 3 4 4 4 5 5 8 9 10 13 16 18 19 21 21 22 23 25 26 LCS_GDT I 20 I 20 3 5 18 3 3 4 4 4 5 7 7 10 10 11 12 15 15 17 18 19 22 23 25 LCS_GDT K 21 K 21 3 5 18 3 7 7 8 8 8 9 9 10 10 14 16 18 19 21 21 22 23 25 26 LCS_GDT D 22 D 22 3 5 18 3 3 3 6 9 9 9 11 13 14 15 17 18 19 21 21 22 23 25 26 LCS_GDT L 23 L 23 3 3 18 3 3 3 7 9 9 9 11 13 14 15 17 18 19 21 21 22 23 25 26 LCS_GDT T 24 T 24 3 3 18 1 5 6 7 9 9 9 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT K 25 K 25 3 4 18 0 3 4 4 4 5 7 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT L 26 L 26 3 5 18 3 3 4 4 6 7 8 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT G 27 G 27 3 5 18 3 3 4 4 6 7 8 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT A 28 A 28 3 5 18 3 3 4 4 6 8 8 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT I 29 I 29 5 6 18 3 5 6 7 9 9 9 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT Y 30 Y 30 5 6 18 4 5 6 7 9 9 9 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT D 31 D 31 5 6 18 4 5 6 7 9 9 9 12 13 15 15 17 18 19 21 21 22 23 25 26 LCS_GDT K 32 K 32 5 6 18 4 5 6 7 9 9 9 12 13 15 15 17 17 19 21 21 22 23 25 26 LCS_GDT T 33 T 33 5 8 18 4 5 5 7 9 9 9 12 13 15 15 17 17 19 21 21 22 23 25 26 LCS_GDT K 34 K 34 4 8 18 3 4 4 6 7 8 9 12 13 15 15 17 17 19 21 21 22 23 25 26 LCS_GDT K 35 K 35 5 8 18 3 4 5 6 7 8 9 12 13 15 15 17 17 19 20 21 22 23 25 26 LCS_GDT Y 36 Y 36 5 8 18 3 4 5 6 7 8 9 10 13 15 15 17 17 19 20 21 22 23 25 26 LCS_GDT W 37 W 37 5 8 18 3 4 5 6 7 8 9 10 11 15 15 17 17 19 21 21 22 23 25 26 LCS_GDT V 38 V 38 5 8 18 3 4 5 6 7 8 9 10 11 12 15 16 18 19 21 21 22 23 25 26 LCS_GDT Y 39 Y 39 5 8 18 3 4 5 6 7 8 9 10 11 12 15 16 18 19 21 21 22 23 25 26 LCS_GDT Q 40 Q 40 3 8 18 3 3 3 6 7 8 9 9 11 12 15 16 18 18 20 20 22 23 25 26 LCS_GDT G 41 G 41 4 8 15 3 4 5 6 7 8 9 10 11 12 13 13 14 17 18 20 21 22 25 26 LCS_GDT K 42 K 42 5 6 15 4 5 5 6 6 6 6 7 7 12 12 13 14 16 18 20 21 22 25 26 LCS_GDT P 43 P 43 5 6 13 4 5 5 6 6 6 6 7 7 7 9 11 14 16 17 18 21 22 23 25 LCS_GDT V 44 V 44 5 6 8 4 5 5 6 6 7 7 9 10 11 13 13 14 16 17 19 21 22 23 25 LCS_GDT M 45 M 45 5 6 8 4 5 5 6 6 6 6 8 8 11 13 13 14 16 17 19 21 22 23 25 LCS_GDT P 46 P 46 5 6 8 4 5 5 6 6 6 6 8 8 10 13 13 14 16 17 18 21 22 23 25 LCS_AVERAGE LCS_A: 25.96 ( 13.47 17.96 46.45 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 7 8 9 9 9 12 13 15 15 17 18 19 21 21 22 23 25 26 GDT PERCENT_AT 11.43 20.00 20.00 22.86 25.71 25.71 25.71 34.29 37.14 42.86 42.86 48.57 51.43 54.29 60.00 60.00 62.86 65.71 71.43 74.29 GDT RMS_LOCAL 0.23 0.63 0.63 0.92 1.61 1.61 1.61 3.34 3.39 3.84 3.69 4.16 4.73 4.64 5.11 5.02 5.32 5.54 6.24 6.39 GDT RMS_ALL_AT 16.27 17.58 17.58 17.04 10.53 10.53 10.53 12.86 10.50 11.94 10.67 11.49 10.95 10.86 10.70 11.14 10.81 10.80 10.89 10.65 # Checking swapping # possible swapping detected: D 22 D 22 # possible swapping detected: Y 36 Y 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 30.184 0 0.534 1.206 36.422 0.000 0.000 LGA F 13 F 13 24.085 0 0.099 0.746 26.283 0.000 0.000 LGA H 14 H 14 22.127 0 0.090 1.245 24.586 0.000 0.000 LGA Y 15 Y 15 18.212 0 0.107 0.148 20.759 0.000 0.000 LGA T 16 T 16 14.928 0 0.034 0.092 16.920 0.000 0.000 LGA V 17 V 17 10.629 0 0.597 0.655 12.905 0.714 0.476 LGA T 18 T 18 8.683 0 0.612 1.335 9.873 1.667 3.129 LGA D 19 D 19 12.853 0 0.568 0.869 15.828 0.000 0.000 LGA I 20 I 20 13.578 0 0.572 0.706 17.503 0.000 0.000 LGA K 21 K 21 7.440 0 0.630 1.259 9.509 7.619 22.275 LGA D 22 D 22 8.179 0 0.653 1.331 10.953 7.262 3.750 LGA L 23 L 23 7.505 0 0.593 0.950 10.989 8.690 5.417 LGA T 24 T 24 3.578 0 0.625 0.590 7.426 56.667 42.789 LGA K 25 K 25 3.911 0 0.633 0.999 14.227 44.167 22.222 LGA L 26 L 26 3.427 0 0.679 0.627 5.710 51.786 41.905 LGA G 27 G 27 3.856 0 0.615 0.615 3.856 48.333 48.333 LGA A 28 A 28 2.453 0 0.182 0.225 3.456 59.167 60.286 LGA I 29 I 29 3.494 0 0.217 0.302 5.881 53.690 42.024 LGA Y 30 Y 30 3.640 0 0.072 0.253 5.168 46.667 40.595 LGA D 31 D 31 3.530 0 0.181 0.891 7.632 48.452 33.155 LGA K 32 K 32 1.850 0 0.596 1.071 5.855 56.548 55.979 LGA T 33 T 33 3.016 0 0.631 1.359 7.063 63.095 47.279 LGA K 34 K 34 2.275 0 0.677 0.866 6.527 68.929 45.238 LGA K 35 K 35 4.224 0 0.658 0.585 8.723 40.238 27.937 LGA Y 36 Y 36 4.752 0 0.125 1.147 11.270 32.976 22.143 LGA W 37 W 37 7.075 0 0.067 1.310 12.546 8.095 2.653 LGA V 38 V 38 10.821 0 0.150 0.891 12.381 0.714 0.408 LGA Y 39 Y 39 13.764 0 0.044 0.132 17.339 0.000 0.000 LGA Q 40 Q 40 14.309 0 0.554 0.571 16.834 0.000 0.000 LGA G 41 G 41 15.351 0 0.708 0.708 16.276 0.000 0.000 LGA K 42 K 42 15.206 0 0.143 0.626 15.737 0.000 0.000 LGA P 43 P 43 17.672 0 0.060 0.101 19.519 0.000 0.000 LGA V 44 V 44 16.666 0 0.047 0.070 19.141 0.000 0.000 LGA M 45 M 45 18.847 0 0.173 1.272 21.338 0.000 0.000 LGA P 46 P 46 20.181 0 0.049 0.105 22.108 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 9.708 9.597 11.110 20.156 16.228 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 12 3.34 34.286 29.866 0.348 LGA_LOCAL RMSD: 3.344 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.861 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 9.708 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.880193 * X + 0.467181 * Y + 0.083675 * Z + -76.189346 Y_new = -0.414008 * X + 0.669563 * Y + 0.616671 * Z + -73.971367 Z_new = 0.232072 * X + -0.577432 * Y + 0.782761 * Z + -23.221592 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.439656 -0.234207 -0.635574 [DEG: -25.1904 -13.4191 -36.4157 ] ZXZ: 3.006729 0.671706 2.759446 [DEG: 172.2729 38.4859 158.1046 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS102_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS102_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 12 3.34 29.866 9.71 REMARK ---------------------------------------------------------- MOLECULE T0548TS102_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REFINED REMARK PARENT 3l2t_A ATOM 106 N HIS 12 -50.713 -2.499 21.932 1.00 9.74 N ATOM 107 CA HIS 12 -51.648 -3.533 22.275 1.00 9.74 C ATOM 108 C HIS 12 -50.884 -4.729 22.743 1.00 9.74 C ATOM 109 O HIS 12 -51.331 -5.870 22.662 1.00 9.74 O ATOM 110 H HIS 12 -50.682 -1.742 22.416 1.00 9.74 H ATOM 111 CB HIS 12 -52.537 -3.870 21.078 1.00 9.74 C ATOM 112 CG HIS 12 -53.324 -2.705 20.562 1.00 9.74 C ATOM 113 ND1 HIS 12 -54.350 -2.126 21.277 1.00 9.74 N ATOM 114 CE1 HIS 12 -54.863 -1.109 20.560 1.00 9.74 C ATOM 115 CD2 HIS 12 -53.311 -1.897 19.350 1.00 9.74 C ATOM 116 HE2 HIS 12 -54.432 -0.331 18.751 1.00 9.74 H ATOM 117 NE2 HIS 12 -54.244 -0.967 19.404 1.00 9.74 N ATOM 118 N PHE 13 -49.683 -4.453 23.284 1.00 9.35 N ATOM 119 CA PHE 13 -48.873 -5.403 23.983 1.00 9.35 C ATOM 120 C PHE 13 -48.700 -4.747 25.312 1.00 9.35 C ATOM 121 O PHE 13 -48.583 -3.526 25.383 1.00 9.35 O ATOM 122 H PHE 13 -49.398 -3.605 23.185 1.00 9.35 H ATOM 123 CB PHE 13 -47.570 -5.660 23.222 1.00 9.35 C ATOM 124 CG PHE 13 -47.771 -6.303 21.879 1.00 9.35 C ATOM 125 CZ PHE 13 -48.147 -7.498 19.398 1.00 9.35 C ATOM 126 CD1 PHE 13 -46.992 -5.935 20.796 1.00 9.35 C ATOM 127 CE1 PHE 13 -47.177 -6.527 19.561 1.00 9.35 C ATOM 128 CD2 PHE 13 -48.739 -7.275 21.699 1.00 9.35 C ATOM 129 CE2 PHE 13 -48.924 -7.867 20.465 1.00 9.35 C ATOM 130 N HIS 14 -48.691 -5.511 26.415 1.00 9.16 N ATOM 131 CA HIS 14 -48.590 -4.816 27.663 1.00 9.16 C ATOM 132 C HIS 14 -47.149 -4.737 28.034 1.00 9.16 C ATOM 133 O HIS 14 -46.402 -5.706 27.896 1.00 9.16 O ATOM 134 H HIS 14 -48.743 -6.409 26.402 1.00 9.16 H ATOM 135 CB HIS 14 -49.413 -5.526 28.739 1.00 9.16 C ATOM 136 CG HIS 14 -50.888 -5.507 28.482 1.00 9.16 C ATOM 137 HD1 HIS 14 -51.361 -3.572 29.015 1.00 9.16 H ATOM 138 ND1 HIS 14 -51.667 -4.390 28.699 1.00 9.16 N ATOM 139 CE1 HIS 14 -52.941 -4.678 28.380 1.00 9.16 C ATOM 140 CD2 HIS 14 -51.871 -6.466 28.000 1.00 9.16 C ATOM 141 NE2 HIS 14 -53.071 -5.921 27.960 1.00 9.16 N ATOM 142 N TYR 15 -46.723 -3.555 28.513 1.00 9.03 N ATOM 143 CA TYR 15 -45.366 -3.364 28.929 1.00 9.03 C ATOM 144 C TYR 15 -45.450 -3.194 30.408 1.00 9.03 C ATOM 145 O TYR 15 -46.180 -2.332 30.896 1.00 9.03 O ATOM 146 H TYR 15 -47.311 -2.875 28.570 1.00 9.03 H ATOM 147 CB TYR 15 -44.749 -2.163 28.210 1.00 9.03 C ATOM 148 CG TYR 15 -44.579 -2.363 26.720 1.00 9.03 C ATOM 149 HH TYR 15 -43.563 -2.386 22.333 1.00 9.03 H ATOM 150 OH TYR 15 -44.122 -2.924 22.625 1.00 9.03 O ATOM 151 CZ TYR 15 -44.272 -2.737 23.980 1.00 9.03 C ATOM 152 CD1 TYR 15 -45.304 -3.337 26.045 1.00 9.03 C ATOM 153 CE1 TYR 15 -45.156 -3.526 24.684 1.00 9.03 C ATOM 154 CD2 TYR 15 -43.693 -1.578 25.994 1.00 9.03 C ATOM 155 CE2 TYR 15 -43.532 -1.753 24.633 1.00 9.03 C ATOM 156 N THR 16 -44.708 -4.019 31.166 1.00 9.49 N ATOM 157 CA THR 16 -44.762 -3.907 32.593 1.00 9.49 C ATOM 158 C THR 16 -43.380 -3.637 33.072 1.00 9.49 C ATOM 159 O THR 16 -42.407 -3.789 32.335 1.00 9.49 O ATOM 160 H THR 16 -44.179 -4.639 30.783 1.00 9.49 H ATOM 161 CB THR 16 -45.340 -5.181 33.238 1.00 9.49 C ATOM 162 HG1 THR 16 -44.795 -6.977 33.309 1.00 9.49 H ATOM 163 OG1 THR 16 -44.481 -6.294 32.960 1.00 9.49 O ATOM 164 CG2 THR 16 -46.722 -5.482 32.677 1.00 9.49 C ATOM 165 N VAL 17 -43.261 -3.190 34.332 1.00 9.64 N ATOM 166 CA VAL 17 -41.959 -2.927 34.848 1.00 9.64 C ATOM 167 C VAL 17 -41.772 -3.756 36.072 1.00 9.64 C ATOM 168 O VAL 17 -42.662 -3.864 36.913 1.00 9.64 O ATOM 169 H VAL 17 -43.984 -3.055 34.849 1.00 9.64 H ATOM 170 CB VAL 17 -41.763 -1.429 35.147 1.00 9.64 C ATOM 171 CG1 VAL 17 -40.393 -1.185 35.766 1.00 9.64 C ATOM 172 CG2 VAL 17 -41.933 -0.606 33.880 1.00 9.64 C ATOM 173 N THR 18 -40.594 -4.392 36.173 1.00 10.10 N ATOM 174 CA THR 18 -40.233 -5.134 37.339 1.00 10.10 C ATOM 175 C THR 18 -38.884 -4.604 37.676 1.00 10.10 C ATOM 176 O THR 18 -38.388 -3.780 36.906 1.00 10.10 O ATOM 177 H THR 18 -40.024 -4.339 35.478 1.00 10.10 H ATOM 178 CB THR 18 -40.249 -6.651 37.069 1.00 10.10 C ATOM 179 HG1 THR 18 -38.481 -6.765 36.440 1.00 10.10 H ATOM 180 OG1 THR 18 -39.220 -6.983 36.130 1.00 10.10 O ATOM 181 CG2 THR 18 -41.591 -7.075 36.493 1.00 10.10 C ATOM 182 N ASP 19 -38.291 -5.063 38.809 1.00 11.31 N ATOM 183 CA ASP 19 -37.045 -4.601 39.382 1.00 11.31 C ATOM 184 C ASP 19 -36.113 -4.219 38.291 1.00 11.31 C ATOM 185 O ASP 19 -35.388 -5.059 37.759 1.00 11.31 O ATOM 186 H ASP 19 -38.755 -5.720 39.212 1.00 11.31 H ATOM 187 CB ASP 19 -36.433 -5.683 40.274 1.00 11.31 C ATOM 188 CG ASP 19 -35.183 -5.209 40.990 1.00 11.31 C ATOM 189 OD1 ASP 19 -34.706 -4.098 40.679 1.00 11.31 O ATOM 190 OD2 ASP 19 -34.679 -5.950 41.860 1.00 11.31 O ATOM 191 N ILE 20 -36.111 -2.893 38.021 1.00 11.58 N ATOM 192 CA ILE 20 -35.527 -2.218 36.897 1.00 11.58 C ATOM 193 C ILE 20 -35.306 -3.192 35.792 1.00 11.58 C ATOM 194 O ILE 20 -34.303 -3.898 35.733 1.00 11.58 O ATOM 195 H ILE 20 -36.543 -2.421 38.655 1.00 11.58 H ATOM 196 CB ILE 20 -34.209 -1.520 37.279 1.00 11.58 C ATOM 197 CD1 ILE 20 -35.421 0.584 38.059 1.00 11.58 C ATOM 198 CG1 ILE 20 -34.446 -0.517 38.412 1.00 11.58 C ATOM 199 CG2 ILE 20 -33.581 -0.861 36.061 1.00 11.58 C ATOM 200 N LYS 21 -36.277 -3.221 34.866 1.00 10.77 N ATOM 201 CA LYS 21 -36.270 -4.079 33.720 1.00 10.77 C ATOM 202 C LYS 21 -37.543 -3.765 33.015 1.00 10.77 C ATOM 203 O LYS 21 -38.594 -3.668 33.649 1.00 10.77 O ATOM 204 H LYS 21 -36.963 -2.653 34.999 1.00 10.77 H ATOM 205 CB LYS 21 -36.150 -5.543 34.147 1.00 10.77 C ATOM 206 CD LYS 21 -34.508 -6.243 32.382 1.00 10.77 C ATOM 207 CE LYS 21 -33.387 -6.668 33.316 1.00 10.77 C ATOM 208 CG LYS 21 -35.872 -6.504 33.002 1.00 10.77 C ATOM 209 HZ1 LYS 21 -31.417 -6.766 33.257 1.00 10.77 H ATOM 210 HZ2 LYS 21 -31.921 -5.656 32.466 1.00 10.77 H ATOM 211 HZ3 LYS 21 -32.005 -7.011 31.951 1.00 10.77 H ATOM 212 NZ LYS 21 -32.048 -6.509 32.685 1.00 10.77 N ATOM 213 N ASP 22 -37.498 -3.596 31.687 1.00 10.80 N ATOM 214 CA ASP 22 -38.722 -3.348 30.994 1.00 10.80 C ATOM 215 C ASP 22 -39.135 -4.679 30.464 1.00 10.80 C ATOM 216 O ASP 22 -38.375 -5.320 29.742 1.00 10.80 O ATOM 217 H ASP 22 -36.723 -3.635 31.231 1.00 10.80 H ATOM 218 CB ASP 22 -38.518 -2.297 29.902 1.00 10.80 C ATOM 219 CG ASP 22 -39.807 -1.932 29.193 1.00 10.80 C ATOM 220 OD1 ASP 22 -40.820 -2.632 29.407 1.00 10.80 O ATOM 221 OD2 ASP 22 -39.806 -0.948 28.425 1.00 10.80 O ATOM 222 N LEU 23 -40.344 -5.143 30.835 1.00 10.37 N ATOM 223 CA LEU 23 -40.770 -6.448 30.424 1.00 10.37 C ATOM 224 C LEU 23 -41.947 -6.297 29.512 1.00 10.37 C ATOM 225 O LEU 23 -42.690 -5.320 29.593 1.00 10.37 O ATOM 226 H LEU 23 -40.884 -4.632 31.342 1.00 10.37 H ATOM 227 CB LEU 23 -41.111 -7.309 31.641 1.00 10.37 C ATOM 228 CG LEU 23 -39.925 -7.851 32.440 1.00 10.37 C ATOM 229 CD1 LEU 23 -39.204 -6.724 33.164 1.00 10.37 C ATOM 230 CD2 LEU 23 -40.383 -8.909 33.434 1.00 10.37 C ATOM 231 N THR 24 -42.128 -7.265 28.592 1.00 10.45 N ATOM 232 CA THR 24 -43.240 -7.203 27.689 1.00 10.45 C ATOM 233 C THR 24 -43.726 -8.595 27.467 1.00 10.45 C ATOM 234 O THR 24 -43.013 -9.569 27.709 1.00 10.45 O ATOM 235 H THR 24 -41.549 -7.951 28.544 1.00 10.45 H ATOM 236 CB THR 24 -42.850 -6.530 26.359 1.00 10.45 C ATOM 237 HG1 THR 24 -41.194 -7.399 26.168 1.00 10.45 H ATOM 238 OG1 THR 24 -41.867 -7.328 25.687 1.00 10.45 O ATOM 239 CG2 THR 24 -42.266 -5.150 26.612 1.00 10.45 C ATOM 240 N LYS 25 -44.982 -8.729 27.004 1.00 10.55 N ATOM 241 CA LYS 25 -45.480 -10.050 26.778 1.00 10.55 C ATOM 242 C LYS 25 -45.724 -10.214 25.316 1.00 10.55 C ATOM 243 O LYS 25 -46.475 -9.455 24.709 1.00 10.55 O ATOM 244 H LYS 25 -45.504 -8.016 26.837 1.00 10.55 H ATOM 245 CB LYS 25 -46.753 -10.289 27.592 1.00 10.55 C ATOM 246 CD LYS 25 -47.844 -10.504 29.842 1.00 10.55 C ATOM 247 CE LYS 25 -47.644 -10.421 31.347 1.00 10.55 C ATOM 248 CG LYS 25 -46.543 -10.253 29.097 1.00 10.55 C ATOM 249 HZ1 LYS 25 -48.766 -10.569 32.963 1.00 10.55 H ATOM 250 HZ2 LYS 25 -49.251 -11.427 31.896 1.00 10.55 H ATOM 251 HZ3 LYS 25 -49.504 -9.996 31.851 1.00 10.55 H ATOM 252 NZ LYS 25 -48.920 -10.624 32.087 1.00 10.55 N ATOM 253 N LEU 26 -45.051 -11.214 24.718 1.00 10.33 N ATOM 254 CA LEU 26 -45.253 -11.535 23.336 1.00 10.33 C ATOM 255 C LEU 26 -45.153 -13.011 23.204 1.00 10.33 C ATOM 256 O LEU 26 -44.290 -13.615 23.834 1.00 10.33 O ATOM 257 H LEU 26 -44.463 -11.686 25.209 1.00 10.33 H ATOM 258 CB LEU 26 -44.226 -10.810 22.462 1.00 10.33 C ATOM 259 CG LEU 26 -44.300 -11.087 20.960 1.00 10.33 C ATOM 260 CD1 LEU 26 -45.593 -10.543 20.374 1.00 10.33 C ATOM 261 CD2 LEU 26 -43.101 -10.486 20.244 1.00 10.33 C ATOM 262 N GLY 27 -46.043 -13.614 22.385 1.00 11.10 N ATOM 263 CA GLY 27 -46.017 -15.027 22.112 1.00 11.10 C ATOM 264 C GLY 27 -45.948 -15.729 23.423 1.00 11.10 C ATOM 265 O GLY 27 -46.890 -15.689 24.212 1.00 11.10 O ATOM 266 H GLY 27 -46.672 -13.094 22.004 1.00 11.10 H ATOM 267 N ALA 28 -44.814 -16.408 23.685 1.00 10.77 N ATOM 268 CA ALA 28 -44.710 -16.967 24.990 1.00 10.77 C ATOM 269 C ALA 28 -44.735 -15.778 25.890 1.00 10.77 C ATOM 270 O ALA 28 -43.804 -14.977 25.916 1.00 10.77 O ATOM 271 H ALA 28 -44.146 -16.518 23.093 1.00 10.77 H ATOM 272 CB ALA 28 -43.447 -17.804 25.108 1.00 10.77 C ATOM 273 N ILE 29 -45.812 -15.661 26.680 1.00 10.46 N ATOM 274 CA ILE 29 -46.016 -14.543 27.549 1.00 10.46 C ATOM 275 C ILE 29 -46.364 -15.172 28.837 1.00 10.46 C ATOM 276 O ILE 29 -45.986 -16.315 29.051 1.00 10.46 O ATOM 277 H ILE 29 -46.421 -16.323 26.647 1.00 10.46 H ATOM 278 CB ILE 29 -47.098 -13.593 27.004 1.00 10.46 C ATOM 279 CD1 ILE 29 -49.605 -13.408 26.573 1.00 10.46 C ATOM 280 CG1 ILE 29 -48.441 -14.319 26.900 1.00 10.46 C ATOM 281 CG2 ILE 29 -46.667 -13.006 25.667 1.00 10.46 C ATOM 282 N TYR 30 -47.021 -14.455 29.766 1.00 10.95 N ATOM 283 CA TYR 30 -47.363 -15.216 30.928 1.00 10.95 C ATOM 284 C TYR 30 -48.368 -16.180 30.392 1.00 10.95 C ATOM 285 O TYR 30 -49.425 -15.775 29.912 1.00 10.95 O ATOM 286 H TYR 30 -47.248 -13.586 29.715 1.00 10.95 H ATOM 287 CB TYR 30 -47.886 -14.298 32.034 1.00 10.95 C ATOM 288 CG TYR 30 -48.241 -15.021 33.313 1.00 10.95 C ATOM 289 HH TYR 30 -50.025 -17.069 36.905 1.00 10.95 H ATOM 290 OH TYR 30 -49.200 -17.011 36.836 1.00 10.95 O ATOM 291 CZ TYR 30 -48.885 -16.353 35.671 1.00 10.95 C ATOM 292 CD1 TYR 30 -47.249 -15.478 34.172 1.00 10.95 C ATOM 293 CE1 TYR 30 -47.563 -16.140 35.342 1.00 10.95 C ATOM 294 CD2 TYR 30 -49.568 -15.244 33.660 1.00 10.95 C ATOM 295 CE2 TYR 30 -49.901 -15.905 34.828 1.00 10.95 C ATOM 296 N ASP 31 -48.066 -17.487 30.451 1.00 11.53 N ATOM 297 CA ASP 31 -48.977 -18.408 29.845 1.00 11.53 C ATOM 298 C ASP 31 -49.536 -19.290 30.896 1.00 11.53 C ATOM 299 O ASP 31 -48.828 -19.742 31.796 1.00 11.53 O ATOM 300 H ASP 31 -47.321 -17.791 30.853 1.00 11.53 H ATOM 301 CB ASP 31 -48.271 -19.219 28.756 1.00 11.53 C ATOM 302 CG ASP 31 -47.849 -18.368 27.576 1.00 11.53 C ATOM 303 OD1 ASP 31 -48.695 -17.608 27.058 1.00 11.53 O ATOM 304 OD2 ASP 31 -46.672 -18.458 27.170 1.00 11.53 O ATOM 305 N LYS 32 -50.852 -19.541 30.809 1.00 12.64 N ATOM 306 CA LYS 32 -51.462 -20.466 31.707 1.00 12.64 C ATOM 307 C LYS 32 -52.046 -21.531 30.841 1.00 12.64 C ATOM 308 O LYS 32 -52.842 -21.245 29.947 1.00 12.64 O ATOM 309 H LYS 32 -51.350 -19.125 30.186 1.00 12.64 H ATOM 310 CB LYS 32 -52.505 -19.761 32.576 1.00 12.64 C ATOM 311 CD LYS 32 -54.178 -19.897 34.443 1.00 12.64 C ATOM 312 CE LYS 32 -54.873 -20.808 35.441 1.00 12.64 C ATOM 313 CG LYS 32 -53.176 -20.665 33.598 1.00 12.64 C ATOM 314 HZ1 LYS 32 -56.269 -20.636 36.826 1.00 12.64 H ATOM 315 HZ2 LYS 32 -56.503 -19.729 35.715 1.00 12.64 H ATOM 316 HZ3 LYS 32 -55.484 -19.418 36.704 1.00 12.64 H ATOM 317 NZ LYS 32 -55.883 -20.075 36.253 1.00 12.64 N ATOM 318 N THR 33 -51.643 -22.795 31.061 1.00 13.48 N ATOM 319 CA THR 33 -52.204 -23.844 30.263 1.00 13.48 C ATOM 320 C THR 33 -52.082 -25.113 31.036 1.00 13.48 C ATOM 321 O THR 33 -51.759 -25.104 32.224 1.00 13.48 O ATOM 322 H THR 33 -51.033 -22.989 31.694 1.00 13.48 H ATOM 323 CB THR 33 -51.503 -23.953 28.897 1.00 13.48 C ATOM 324 HG1 THR 33 -53.011 -24.531 27.937 1.00 13.48 H ATOM 325 OG1 THR 33 -52.244 -24.831 28.044 1.00 13.48 O ATOM 326 CG2 THR 33 -50.097 -24.508 29.063 1.00 13.48 C ATOM 327 N LYS 34 -52.355 -26.250 30.367 1.00 14.36 N ATOM 328 CA LYS 34 -52.299 -27.529 31.007 1.00 14.36 C ATOM 329 C LYS 34 -50.864 -27.843 31.281 1.00 14.36 C ATOM 330 O LYS 34 -49.991 -27.611 30.447 1.00 14.36 O ATOM 331 H LYS 34 -52.578 -26.192 29.497 1.00 14.36 H ATOM 332 CB LYS 34 -52.956 -28.596 30.130 1.00 14.36 C ATOM 333 CD LYS 34 -55.049 -29.540 29.117 1.00 14.36 C ATOM 334 CE LYS 34 -56.548 -29.362 28.940 1.00 14.36 C ATOM 335 CG LYS 34 -54.457 -28.426 29.965 1.00 14.36 C ATOM 336 HZ1 LYS 34 -58.016 -30.304 28.016 1.00 14.36 H ATOM 337 HZ2 LYS 34 -56.996 -31.228 28.483 1.00 14.36 H ATOM 338 HZ3 LYS 34 -56.761 -30.427 27.293 1.00 14.36 H ATOM 339 NZ LYS 34 -57.139 -30.439 28.099 1.00 14.36 N ATOM 340 N LYS 35 -50.586 -28.365 32.490 1.00 14.75 N ATOM 341 CA LYS 35 -49.263 -28.818 32.799 1.00 14.75 C ATOM 342 C LYS 35 -48.375 -27.678 33.181 1.00 14.75 C ATOM 343 O LYS 35 -48.835 -26.629 33.634 1.00 14.75 O ATOM 344 H LYS 35 -51.240 -28.430 33.105 1.00 14.75 H ATOM 345 CB LYS 35 -48.664 -29.574 31.613 1.00 14.75 C ATOM 346 CD LYS 35 -48.721 -31.579 30.106 1.00 14.75 C ATOM 347 CE LYS 35 -49.467 -32.851 29.736 1.00 14.75 C ATOM 348 CG LYS 35 -49.397 -30.857 31.258 1.00 14.75 C ATOM 349 HZ1 LYS 35 -49.296 -34.291 28.398 1.00 14.75 H ATOM 350 HZ2 LYS 35 -47.998 -33.773 28.798 1.00 14.75 H ATOM 351 HZ3 LYS 35 -48.829 -33.016 27.877 1.00 14.75 H ATOM 352 NZ LYS 35 -48.833 -33.554 28.587 1.00 14.75 N ATOM 353 N TYR 36 -47.058 -27.913 33.008 1.00 13.49 N ATOM 354 CA TYR 36 -45.951 -27.069 33.360 1.00 13.49 C ATOM 355 C TYR 36 -46.318 -25.623 33.283 1.00 13.49 C ATOM 356 O TYR 36 -46.781 -25.132 32.255 1.00 13.49 O ATOM 357 H TYR 36 -46.910 -28.711 32.618 1.00 13.49 H ATOM 358 CB TYR 36 -44.751 -27.349 32.452 1.00 13.49 C ATOM 359 CG TYR 36 -43.528 -26.524 32.780 1.00 13.49 C ATOM 360 HH TYR 36 -40.083 -23.645 33.141 1.00 13.49 H ATOM 361 OH TYR 36 -40.160 -24.263 33.691 1.00 13.49 O ATOM 362 CZ TYR 36 -41.274 -25.010 33.389 1.00 13.49 C ATOM 363 CD1 TYR 36 -42.723 -26.844 33.866 1.00 13.49 C ATOM 364 CE1 TYR 36 -41.603 -26.095 34.171 1.00 13.49 C ATOM 365 CD2 TYR 36 -43.182 -25.427 32.001 1.00 13.49 C ATOM 366 CE2 TYR 36 -42.065 -24.665 32.292 1.00 13.49 C ATOM 367 N TRP 37 -46.111 -24.907 34.404 1.00 12.53 N ATOM 368 CA TRP 37 -46.331 -23.496 34.421 1.00 12.53 C ATOM 369 C TRP 37 -45.079 -22.911 34.985 1.00 12.53 C ATOM 370 O TRP 37 -44.487 -23.467 35.911 1.00 12.53 O ATOM 371 H TRP 37 -45.830 -25.327 35.149 1.00 12.53 H ATOM 372 CB TRP 37 -47.578 -23.158 35.241 1.00 12.53 C ATOM 373 HB2 TRP 37 -48.339 -23.840 35.073 1.00 12.53 H ATOM 374 HB3 TRP 37 -47.716 -22.189 35.442 1.00 12.53 H ATOM 375 CG TRP 37 -47.483 -23.577 36.676 1.00 12.53 C ATOM 376 CD1 TRP 37 -47.835 -24.786 37.202 1.00 12.53 C ATOM 377 HE1 TRP 37 -47.773 -25.524 39.125 1.00 12.53 H ATOM 378 NE1 TRP 37 -47.605 -24.800 38.556 1.00 12.53 N ATOM 379 CD2 TRP 37 -47.004 -22.785 37.771 1.00 12.53 C ATOM 380 CE2 TRP 37 -47.095 -23.580 38.928 1.00 12.53 C ATOM 381 CH2 TRP 37 -46.225 -21.839 40.267 1.00 12.53 C ATOM 382 CZ2 TRP 37 -46.707 -23.116 40.184 1.00 12.53 C ATOM 383 CE3 TRP 37 -46.508 -21.484 37.884 1.00 12.53 C ATOM 384 CZ3 TRP 37 -46.125 -21.028 39.131 1.00 12.53 C ATOM 385 N VAL 38 -44.622 -21.775 34.431 1.00 12.22 N ATOM 386 CA VAL 38 -43.430 -21.180 34.946 1.00 12.22 C ATOM 387 C VAL 38 -43.557 -19.714 34.745 1.00 12.22 C ATOM 388 O VAL 38 -44.504 -19.240 34.122 1.00 12.22 O ATOM 389 H VAL 38 -45.058 -21.389 33.745 1.00 12.22 H ATOM 390 CB VAL 38 -42.172 -21.750 34.263 1.00 12.22 C ATOM 391 CG1 VAL 38 -42.172 -21.408 32.779 1.00 12.22 C ATOM 392 CG2 VAL 38 -40.916 -21.225 34.937 1.00 12.22 C ATOM 393 N TYR 39 -42.594 -18.950 35.289 1.00 10.78 N ATOM 394 CA TYR 39 -42.664 -17.533 35.134 1.00 10.78 C ATOM 395 C TYR 39 -42.284 -17.259 33.718 1.00 10.78 C ATOM 396 O TYR 39 -41.283 -17.778 33.226 1.00 10.78 O ATOM 397 H TYR 39 -41.911 -19.320 35.744 1.00 10.78 H ATOM 398 CB TYR 39 -41.745 -16.839 36.142 1.00 10.78 C ATOM 399 CG TYR 39 -41.786 -15.330 36.068 1.00 10.78 C ATOM 400 HH TYR 39 -41.236 -10.899 35.479 1.00 10.78 H ATOM 401 OH TYR 39 -41.911 -11.178 35.873 1.00 10.78 O ATOM 402 CZ TYR 39 -41.869 -12.551 35.936 1.00 10.78 C ATOM 403 CD1 TYR 39 -42.848 -14.619 36.613 1.00 10.78 C ATOM 404 CE1 TYR 39 -42.893 -13.238 36.551 1.00 10.78 C ATOM 405 CD2 TYR 39 -40.762 -14.619 35.454 1.00 10.78 C ATOM 406 CE2 TYR 39 -40.791 -13.240 35.381 1.00 10.78 C ATOM 407 N GLN 40 -43.088 -16.446 33.007 1.00 9.17 N ATOM 408 CA GLN 40 -42.774 -16.204 31.630 1.00 9.17 C ATOM 409 C GLN 40 -42.936 -14.746 31.352 1.00 9.17 C ATOM 410 O GLN 40 -43.540 -14.012 32.133 1.00 9.17 O ATOM 411 H GLN 40 -43.810 -16.061 33.379 1.00 9.17 H ATOM 412 CB GLN 40 -43.669 -17.047 30.720 1.00 9.17 C ATOM 413 CD GLN 40 -44.392 -19.348 29.972 1.00 9.17 C ATOM 414 CG GLN 40 -43.494 -18.546 30.892 1.00 9.17 C ATOM 415 OE1 GLN 40 -45.614 -19.346 30.124 1.00 9.17 O ATOM 416 HE21 GLN 40 -44.275 -20.534 28.438 1.00 9.17 H ATOM 417 HE22 GLN 40 -42.891 -20.014 28.936 1.00 9.17 H ATOM 418 NE2 GLN 40 -43.788 -20.039 29.012 1.00 9.17 N ATOM 419 N GLY 41 -42.357 -14.294 30.223 1.00 6.74 N ATOM 420 CA GLY 41 -42.432 -12.926 29.801 1.00 6.74 C ATOM 421 C GLY 41 -41.137 -12.646 29.126 1.00 6.74 C ATOM 422 O GLY 41 -40.203 -13.436 29.238 1.00 6.74 O ATOM 423 H GLY 41 -41.908 -14.895 29.725 1.00 6.74 H ATOM 424 N LYS 42 -41.037 -11.524 28.390 1.00 6.05 N ATOM 425 CA LYS 42 -39.772 -11.261 27.771 1.00 6.05 C ATOM 426 C LYS 42 -39.409 -9.835 28.044 1.00 6.05 C ATOM 427 O LYS 42 -40.084 -8.899 27.620 1.00 6.05 O ATOM 428 H LYS 42 -41.721 -10.950 28.276 1.00 6.05 H ATOM 429 CB LYS 42 -39.838 -11.552 26.271 1.00 6.05 C ATOM 430 CD LYS 42 -40.106 -13.235 24.430 1.00 6.05 C ATOM 431 CE LYS 42 -40.396 -14.688 24.089 1.00 6.05 C ATOM 432 CG LYS 42 -40.098 -13.010 25.933 1.00 6.05 C ATOM 433 HZ1 LYS 42 -40.584 -15.780 22.456 1.00 6.05 H ATOM 434 HZ2 LYS 42 -39.619 -14.709 22.274 1.00 6.05 H ATOM 435 HZ3 LYS 42 -41.042 -14.417 22.245 1.00 6.05 H ATOM 436 NZ LYS 42 -40.412 -14.922 22.619 1.00 6.05 N ATOM 437 N PRO 43 -38.359 -9.671 28.795 1.00 5.26 N ATOM 438 CA PRO 43 -37.908 -8.326 29.014 1.00 5.26 C ATOM 439 C PRO 43 -37.128 -7.787 27.864 1.00 5.26 C ATOM 440 O PRO 43 -36.560 -8.564 27.095 1.00 5.26 O ATOM 441 CB PRO 43 -37.033 -8.429 30.264 1.00 5.26 C ATOM 442 CD PRO 43 -37.825 -10.635 29.778 1.00 5.26 C ATOM 443 CG PRO 43 -37.442 -9.713 30.903 1.00 5.26 C ATOM 444 N VAL 44 -37.092 -6.449 27.722 1.00 4.94 N ATOM 445 CA VAL 44 -36.363 -5.881 26.634 1.00 4.94 C ATOM 446 C VAL 44 -35.166 -5.189 27.195 1.00 4.94 C ATOM 447 O VAL 44 -35.257 -4.428 28.159 1.00 4.94 O ATOM 448 H VAL 44 -37.522 -5.914 28.304 1.00 4.94 H ATOM 449 CB VAL 44 -37.236 -4.916 25.811 1.00 4.94 C ATOM 450 CG1 VAL 44 -36.422 -4.282 24.694 1.00 4.94 C ATOM 451 CG2 VAL 44 -38.447 -5.645 25.245 1.00 4.94 C ATOM 452 N MET 45 -33.988 -5.467 26.609 1.00 4.55 N ATOM 453 CA MET 45 -32.806 -4.800 27.054 1.00 4.55 C ATOM 454 C MET 45 -32.719 -3.505 26.313 1.00 4.55 C ATOM 455 O MET 45 -33.350 -3.310 25.274 1.00 4.55 O ATOM 456 H MET 45 -33.941 -6.068 25.940 1.00 4.55 H ATOM 457 CB MET 45 -31.575 -5.678 26.822 1.00 4.55 C ATOM 458 SD MET 45 -31.699 -6.871 29.319 1.00 4.55 S ATOM 459 CE MET 45 -30.032 -6.323 29.675 1.00 4.55 C ATOM 460 CG MET 45 -31.632 -7.024 27.523 1.00 4.55 C ATOM 461 N PRO 46 -31.945 -2.609 26.850 1.00 4.29 N ATOM 462 CA PRO 46 -31.759 -1.341 26.204 1.00 4.29 C ATOM 463 C PRO 46 -30.949 -1.519 24.961 1.00 4.29 C ATOM 464 O PRO 46 -30.299 -2.552 24.811 1.00 4.29 O ATOM 465 CB PRO 46 -31.028 -0.497 27.249 1.00 4.29 C ATOM 466 CD PRO 46 -31.383 -2.659 28.213 1.00 4.29 C ATOM 467 CG PRO 46 -31.288 -1.194 28.542 1.00 4.29 C TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. Number of atoms possible to evaluate: 0 ERROR! The set of atoms possible to evaluate is empty-> END of the results output