####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS080_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS080_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 12 - 25 4.90 11.89 LONGEST_CONTINUOUS_SEGMENT: 14 13 - 26 4.73 13.45 LONGEST_CONTINUOUS_SEGMENT: 14 14 - 27 4.97 13.96 LONGEST_CONTINUOUS_SEGMENT: 14 15 - 28 4.74 12.63 LONGEST_CONTINUOUS_SEGMENT: 14 16 - 29 4.90 9.88 LCS_AVERAGE: 37.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 40 - 46 1.85 9.50 LCS_AVERAGE: 15.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 41 - 46 0.77 10.79 LCS_AVERAGE: 11.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 3 5 14 0 3 3 4 4 5 5 9 14 15 18 19 20 20 24 25 26 26 26 28 LCS_GDT F 13 F 13 4 6 14 3 3 4 5 6 7 8 9 12 15 17 19 20 20 21 25 26 26 26 27 LCS_GDT H 14 H 14 4 6 14 3 4 4 5 6 7 8 9 14 15 18 19 20 20 24 25 26 26 26 28 LCS_GDT Y 15 Y 15 4 6 14 3 4 4 5 6 7 8 9 14 15 18 19 20 20 24 25 26 27 30 30 LCS_GDT T 16 T 16 4 6 14 3 4 4 5 6 7 8 10 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT V 17 V 17 4 6 14 3 4 4 7 8 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT T 18 T 18 4 6 14 3 4 4 7 8 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT D 19 D 19 4 5 14 3 4 4 5 8 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT I 20 I 20 4 5 14 3 4 4 7 8 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT K 21 K 21 4 5 14 3 4 4 5 5 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT D 22 D 22 4 5 14 3 4 4 5 6 7 10 12 12 14 16 18 20 21 24 25 26 28 30 30 LCS_GDT L 23 L 23 4 5 14 3 4 4 4 5 7 8 9 10 13 16 18 19 20 24 25 26 28 30 30 LCS_GDT T 24 T 24 4 5 14 3 4 4 4 6 9 11 12 12 14 16 18 20 21 24 25 26 28 30 30 LCS_GDT K 25 K 25 3 5 14 3 3 4 4 5 6 7 10 12 14 16 18 20 21 22 24 25 28 30 30 LCS_GDT L 26 L 26 3 5 14 3 3 4 6 10 11 11 11 12 13 16 18 20 21 22 24 25 28 30 30 LCS_GDT G 27 G 27 4 5 14 3 4 4 8 10 11 11 11 12 13 16 18 20 21 22 24 25 28 30 30 LCS_GDT A 28 A 28 4 5 14 3 4 8 9 10 11 11 11 11 13 16 17 20 21 22 23 25 28 30 30 LCS_GDT I 29 I 29 4 5 14 3 4 8 9 10 11 11 11 12 13 16 18 20 21 22 24 25 28 30 30 LCS_GDT Y 30 Y 30 4 5 10 3 4 8 9 10 11 11 11 12 13 13 16 16 17 20 22 25 28 30 30 LCS_GDT D 31 D 31 3 5 10 3 3 4 4 4 7 7 11 12 14 16 18 20 21 22 24 25 28 30 30 LCS_GDT K 32 K 32 3 4 12 3 3 4 4 4 4 8 9 12 14 16 18 20 21 22 24 25 28 30 30 LCS_GDT T 33 T 33 3 4 12 3 3 4 4 5 6 7 7 10 10 16 18 19 20 21 24 25 28 30 30 LCS_GDT K 34 K 34 3 4 13 3 3 4 4 5 6 7 8 12 13 14 18 19 20 23 25 26 28 30 30 LCS_GDT K 35 K 35 3 5 13 0 3 4 4 5 6 7 8 11 11 12 15 19 20 24 25 26 28 30 30 LCS_GDT Y 36 Y 36 3 5 13 3 3 4 4 5 6 7 8 11 11 18 19 20 20 24 25 26 28 30 30 LCS_GDT W 37 W 37 3 5 13 3 3 3 4 5 6 7 8 9 15 18 19 20 20 24 25 26 28 30 30 LCS_GDT V 38 V 38 3 5 13 3 3 3 4 5 5 7 8 9 10 11 14 20 20 24 25 26 28 30 30 LCS_GDT Y 39 Y 39 3 5 13 0 3 3 4 5 6 7 8 12 13 18 19 20 20 24 25 26 28 30 30 LCS_GDT Q 40 Q 40 3 7 13 3 3 4 7 8 10 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT G 41 G 41 6 7 13 4 6 8 9 10 11 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT K 42 K 42 6 7 13 4 6 8 9 10 11 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT P 43 P 43 6 7 13 4 6 8 9 10 11 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT V 44 V 44 6 7 13 4 6 6 9 10 11 11 12 14 15 18 19 20 21 24 25 26 28 30 30 LCS_GDT M 45 M 45 6 7 13 3 6 8 9 10 11 11 12 12 14 18 19 20 21 24 25 26 27 28 30 LCS_GDT P 46 P 46 6 7 13 3 6 8 9 10 11 11 11 12 13 13 16 17 18 24 25 26 27 28 30 LCS_AVERAGE LCS_A: 21.66 ( 11.35 15.67 37.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 8 9 10 11 11 12 14 15 18 19 20 21 24 25 26 28 30 30 GDT PERCENT_AT 11.43 17.14 22.86 25.71 28.57 31.43 31.43 34.29 40.00 42.86 51.43 54.29 57.14 60.00 68.57 71.43 74.29 80.00 85.71 85.71 GDT RMS_LOCAL 0.33 0.77 1.02 1.15 1.40 1.83 1.83 2.45 3.49 3.57 4.08 4.18 4.32 4.85 5.22 5.36 8.29 6.30 6.67 6.62 GDT RMS_ALL_AT 10.28 10.79 14.14 14.00 13.68 13.05 13.05 8.36 9.79 9.96 9.98 10.08 10.25 8.78 9.30 9.12 9.30 8.52 8.30 8.14 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: Y 15 Y 15 # possible swapping detected: D 22 D 22 # possible swapping detected: Y 36 Y 36 # possible swapping detected: Y 39 Y 39 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 11.441 0 0.595 0.852 14.085 0.000 0.048 LGA F 13 F 13 13.065 0 0.557 1.321 21.824 0.000 0.000 LGA H 14 H 14 12.552 0 0.382 1.172 16.122 0.000 0.000 LGA Y 15 Y 15 9.151 0 0.073 1.329 16.740 7.262 2.659 LGA T 16 T 16 6.821 0 0.099 1.153 9.877 21.667 12.925 LGA V 17 V 17 0.895 0 0.596 1.482 5.581 82.143 59.932 LGA T 18 T 18 1.534 0 0.590 0.527 3.239 69.286 66.259 LGA D 19 D 19 3.274 0 0.355 0.344 6.586 57.262 39.048 LGA I 20 I 20 2.309 0 0.609 0.589 4.486 70.952 58.095 LGA K 21 K 21 2.595 0 0.600 0.867 8.279 53.690 32.116 LGA D 22 D 22 6.505 0 0.625 1.250 10.808 22.262 11.607 LGA L 23 L 23 7.312 0 0.178 0.366 12.326 16.905 9.048 LGA T 24 T 24 3.704 0 0.643 0.974 6.059 31.310 27.891 LGA K 25 K 25 10.504 0 0.658 1.040 20.576 1.190 0.529 LGA L 26 L 26 11.436 0 0.647 1.305 13.823 0.000 0.000 LGA G 27 G 27 12.748 0 0.673 0.673 12.748 0.000 0.000 LGA A 28 A 28 12.271 0 0.086 0.115 13.090 0.000 0.000 LGA I 29 I 29 11.612 0 0.049 1.120 12.592 0.000 2.262 LGA Y 30 Y 30 13.316 0 0.397 1.356 17.548 0.000 0.000 LGA D 31 D 31 9.842 0 0.295 0.760 11.172 0.833 0.476 LGA K 32 K 32 10.460 0 0.592 0.869 20.088 2.619 1.164 LGA T 33 T 33 9.041 0 0.669 0.631 12.246 1.429 0.816 LGA K 34 K 34 7.227 0 0.699 0.907 7.638 10.119 22.222 LGA K 35 K 35 9.988 0 0.694 0.549 16.218 0.476 0.212 LGA Y 36 Y 36 10.190 0 0.136 1.346 11.212 0.595 1.310 LGA W 37 W 37 9.216 0 0.090 0.388 10.421 0.595 7.619 LGA V 38 V 38 10.327 0 0.582 0.528 13.807 1.190 0.680 LGA Y 39 Y 39 6.891 0 0.596 1.195 7.979 15.000 16.825 LGA Q 40 Q 40 1.842 0 0.618 1.204 5.800 57.976 49.312 LGA G 41 G 41 2.538 0 0.589 0.589 2.807 65.119 65.119 LGA K 42 K 42 2.366 0 0.043 0.505 7.108 73.095 46.984 LGA P 43 P 43 0.865 0 0.019 0.054 2.141 88.214 79.320 LGA V 44 V 44 1.970 0 0.060 0.070 3.000 70.952 67.211 LGA M 45 M 45 3.477 0 0.173 1.279 6.259 43.929 37.440 LGA P 46 P 46 6.101 0 0.055 0.113 6.637 19.405 19.184 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 7.742 7.698 8.923 25.299 21.095 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 12 2.45 37.143 32.076 0.471 LGA_LOCAL RMSD: 2.446 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.355 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 7.742 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.138426 * X + 0.233545 * Y + 0.962442 * Z + 20.568935 Y_new = -0.416755 * X + 0.895303 * Y + -0.157313 * Z + -81.970398 Z_new = -0.898417 * X + -0.379326 * Y + 0.221264 * Z + -16.949520 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.250110 1.116152 -1.042740 [DEG: -71.6260 63.9508 -59.7446 ] ZXZ: 1.408777 1.347686 -1.970306 [DEG: 80.7170 77.2167 -112.8902 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS080_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS080_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 12 2.45 32.076 7.74 REMARK ---------------------------------------------------------- MOLECULE T0548TS080_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT 3L2QA 1MUHA 1E0EA ATOM 106 N HIS 12 -46.468 -19.645 35.395 1.00 50.00 N ATOM 107 CA HIS 12 -47.799 -19.982 34.984 1.00 50.00 C ATOM 108 C HIS 12 -48.773 -19.176 35.779 1.00 50.00 C ATOM 109 O HIS 12 -49.769 -18.698 35.237 1.00 50.00 O ATOM 110 H HIS 12 -45.927 -20.281 35.731 1.00 50.00 H ATOM 111 CB HIS 12 -48.051 -21.481 35.157 1.00 50.00 C ATOM 112 CG HIS 12 -49.410 -21.921 34.707 1.00 50.00 C ATOM 113 ND1 HIS 12 -49.773 -21.976 33.380 1.00 50.00 N ATOM 114 CE1 HIS 12 -51.045 -22.405 33.292 1.00 50.00 C ATOM 115 CD2 HIS 12 -50.625 -22.371 35.369 1.00 50.00 C ATOM 116 HE2 HIS 12 -52.424 -22.947 34.659 1.00 50.00 H ATOM 117 NE2 HIS 12 -51.562 -22.644 34.481 1.00 50.00 N ATOM 118 N PHE 13 -48.514 -18.997 37.089 1.00 50.00 N ATOM 119 CA PHE 13 -49.471 -18.300 37.897 1.00 50.00 C ATOM 120 C PHE 13 -49.683 -16.934 37.335 1.00 50.00 C ATOM 121 O PHE 13 -50.821 -16.583 37.033 1.00 50.00 O ATOM 122 H PHE 13 -47.754 -19.307 37.458 1.00 50.00 H ATOM 123 CB PHE 13 -48.997 -18.233 39.350 1.00 50.00 C ATOM 124 CG PHE 13 -49.930 -17.482 40.257 1.00 50.00 C ATOM 125 CZ PHE 13 -51.651 -16.087 41.936 1.00 50.00 C ATOM 126 CD1 PHE 13 -51.080 -18.081 40.742 1.00 50.00 C ATOM 127 CE1 PHE 13 -51.937 -17.391 41.576 1.00 50.00 C ATOM 128 CD2 PHE 13 -49.658 -16.176 40.626 1.00 50.00 C ATOM 129 CE2 PHE 13 -50.516 -15.485 41.461 1.00 50.00 C ATOM 130 N HIS 14 -48.589 -16.156 37.174 1.00 50.00 N ATOM 131 CA HIS 14 -48.582 -14.829 36.608 1.00 50.00 C ATOM 132 C HIS 14 -47.601 -14.041 37.410 1.00 50.00 C ATOM 133 O HIS 14 -47.835 -12.873 37.720 1.00 50.00 O ATOM 134 H HIS 14 -47.819 -16.530 37.453 1.00 50.00 H ATOM 135 CB HIS 14 -49.988 -14.227 36.639 1.00 50.00 C ATOM 136 CG HIS 14 -50.088 -12.891 35.971 1.00 50.00 C ATOM 137 ND1 HIS 14 -50.027 -12.735 34.604 1.00 50.00 N ATOM 138 CE1 HIS 14 -50.145 -11.429 34.306 1.00 50.00 C ATOM 139 CD2 HIS 14 -50.255 -11.516 36.421 1.00 50.00 C ATOM 140 HE2 HIS 14 -50.378 -9.767 35.424 1.00 50.00 H ATOM 141 NE2 HIS 14 -50.281 -10.692 35.391 1.00 50.00 N ATOM 142 N TYR 15 -46.455 -14.658 37.744 1.00 50.00 N ATOM 143 CA TYR 15 -45.470 -13.973 38.525 1.00 50.00 C ATOM 144 C TYR 15 -44.339 -13.660 37.611 1.00 50.00 C ATOM 145 O TYR 15 -43.922 -14.496 36.811 1.00 50.00 O ATOM 146 H TYR 15 -46.307 -15.504 37.476 1.00 50.00 H ATOM 147 CB TYR 15 -45.037 -14.832 39.715 1.00 50.00 C ATOM 148 CG TYR 15 -43.973 -14.192 40.578 1.00 50.00 C ATOM 149 HH TYR 15 -40.326 -12.772 42.804 1.00 50.00 H ATOM 150 OH TYR 15 -41.062 -12.421 42.960 1.00 50.00 O ATOM 151 CZ TYR 15 -42.025 -13.008 42.171 1.00 50.00 C ATOM 152 CD1 TYR 15 -44.297 -13.175 41.467 1.00 50.00 C ATOM 153 CE1 TYR 15 -43.333 -12.583 42.260 1.00 50.00 C ATOM 154 CD2 TYR 15 -42.650 -14.607 40.502 1.00 50.00 C ATOM 155 CE2 TYR 15 -41.672 -14.028 41.287 1.00 50.00 C ATOM 156 N THR 16 -43.830 -12.418 37.704 1.00 50.00 N ATOM 157 CA THR 16 -42.776 -11.998 36.833 1.00 50.00 C ATOM 158 C THR 16 -41.508 -12.656 37.258 1.00 50.00 C ATOM 159 O THR 16 -41.260 -12.866 38.445 1.00 50.00 O ATOM 160 H THR 16 -44.158 -11.850 38.320 1.00 50.00 H ATOM 161 CB THR 16 -42.619 -10.466 36.836 1.00 50.00 C ATOM 162 HG1 THR 16 -44.454 -10.071 36.895 1.00 50.00 H ATOM 163 OG1 THR 16 -43.835 -9.856 36.387 1.00 50.00 O ATOM 164 CG2 THR 16 -41.491 -10.044 35.905 1.00 50.00 C ATOM 165 N VAL 17 -40.674 -13.018 36.264 1.00 50.00 N ATOM 166 CA VAL 17 -39.407 -13.624 36.528 1.00 50.00 C ATOM 167 C VAL 17 -38.413 -12.958 35.634 1.00 50.00 C ATOM 168 O VAL 17 -38.762 -12.427 34.581 1.00 50.00 O ATOM 169 H VAL 17 -40.934 -12.868 35.416 1.00 50.00 H ATOM 170 CB VAL 17 -39.453 -15.147 36.308 1.00 50.00 C ATOM 171 CG1 VAL 17 -40.449 -15.793 37.260 1.00 50.00 C ATOM 172 CG2 VAL 17 -39.807 -15.467 34.864 1.00 50.00 C ATOM 173 N THR 18 -37.131 -12.976 36.038 1.00 50.00 N ATOM 174 CA THR 18 -36.146 -12.267 35.282 1.00 50.00 C ATOM 175 C THR 18 -36.059 -12.852 33.912 1.00 50.00 C ATOM 176 O THR 18 -36.011 -14.067 33.728 1.00 50.00 O ATOM 177 H THR 18 -36.890 -13.429 36.777 1.00 50.00 H ATOM 178 CB THR 18 -34.769 -12.309 35.970 1.00 50.00 C ATOM 179 HG1 THR 18 -35.411 -12.121 37.726 1.00 50.00 H ATOM 180 OG1 THR 18 -34.860 -11.704 37.266 1.00 50.00 O ATOM 181 CG2 THR 18 -33.740 -11.547 35.149 1.00 50.00 C ATOM 182 N ASP 19 -36.020 -11.944 32.917 1.00 50.00 N ATOM 183 CA ASP 19 -35.898 -12.227 31.516 1.00 50.00 C ATOM 184 C ASP 19 -37.097 -12.943 30.972 1.00 50.00 C ATOM 185 O ASP 19 -37.013 -13.573 29.919 1.00 50.00 O ATOM 186 H ASP 19 -36.079 -11.093 33.201 1.00 50.00 H ATOM 187 CB ASP 19 -34.643 -13.059 31.245 1.00 50.00 C ATOM 188 CG ASP 19 -33.366 -12.309 31.570 1.00 50.00 C ATOM 189 OD1 ASP 19 -33.366 -11.064 31.470 1.00 50.00 O ATOM 190 OD2 ASP 19 -32.365 -12.966 31.925 1.00 50.00 O ATOM 191 N ILE 20 -38.258 -12.865 31.649 1.00 50.00 N ATOM 192 CA ILE 20 -39.432 -13.417 31.031 1.00 50.00 C ATOM 193 C ILE 20 -40.349 -12.262 30.816 1.00 50.00 C ATOM 194 O ILE 20 -40.929 -11.725 31.759 1.00 50.00 O ATOM 195 H ILE 20 -38.315 -12.483 32.462 1.00 50.00 H ATOM 196 CB ILE 20 -40.057 -14.526 31.898 1.00 50.00 C ATOM 197 CD1 ILE 20 -39.509 -16.685 33.136 1.00 50.00 C ATOM 198 CG1 ILE 20 -39.048 -15.652 32.131 1.00 50.00 C ATOM 199 CG2 ILE 20 -41.340 -15.038 31.262 1.00 50.00 C ATOM 200 N LYS 21 -40.511 -11.860 29.544 1.00 50.00 N ATOM 201 CA LYS 21 -41.288 -10.695 29.254 1.00 50.00 C ATOM 202 C LYS 21 -42.724 -10.981 29.521 1.00 50.00 C ATOM 203 O LYS 21 -43.256 -12.019 29.131 1.00 50.00 O ATOM 204 H LYS 21 -40.130 -12.325 28.875 1.00 50.00 H ATOM 205 CB LYS 21 -41.076 -10.258 27.803 1.00 50.00 C ATOM 206 CD LYS 21 -41.472 -8.551 26.006 1.00 50.00 C ATOM 207 CE LYS 21 -42.181 -7.258 25.638 1.00 50.00 C ATOM 208 CG LYS 21 -41.786 -8.965 27.434 1.00 50.00 C ATOM 209 HZ1 LYS 21 -42.327 -6.091 24.052 1.00 50.00 H ATOM 210 HZ2 LYS 21 -42.174 -7.487 23.678 1.00 50.00 H ATOM 211 HZ3 LYS 21 -41.022 -6.726 24.131 1.00 50.00 H ATOM 212 NZ LYS 21 -41.897 -6.849 24.234 1.00 50.00 N ATOM 213 N ASP 22 -43.384 -10.037 30.215 1.00 50.00 N ATOM 214 CA ASP 22 -44.775 -10.162 30.514 1.00 50.00 C ATOM 215 C ASP 22 -45.507 -9.652 29.318 1.00 50.00 C ATOM 216 O ASP 22 -44.896 -9.349 28.293 1.00 50.00 O ATOM 217 H ASP 22 -42.927 -9.312 30.493 1.00 50.00 H ATOM 218 CB ASP 22 -45.121 -9.391 31.790 1.00 50.00 C ATOM 219 CG ASP 22 -45.003 -7.890 31.613 1.00 50.00 C ATOM 220 OD1 ASP 22 -44.975 -7.429 30.452 1.00 50.00 O ATOM 221 OD2 ASP 22 -44.942 -7.175 32.635 1.00 50.00 O ATOM 222 N LEU 23 -46.845 -9.534 29.443 1.00 50.00 N ATOM 223 CA LEU 23 -47.701 -9.104 28.374 1.00 50.00 C ATOM 224 C LEU 23 -47.914 -10.268 27.462 1.00 50.00 C ATOM 225 O LEU 23 -48.791 -10.247 26.601 1.00 50.00 O ATOM 226 H LEU 23 -47.196 -9.742 30.246 1.00 50.00 H ATOM 227 CB LEU 23 -47.084 -7.912 27.640 1.00 50.00 C ATOM 228 CG LEU 23 -46.775 -6.678 28.491 1.00 50.00 C ATOM 229 CD1 LEU 23 -46.116 -5.596 27.649 1.00 50.00 C ATOM 230 CD2 LEU 23 -48.042 -6.144 29.141 1.00 50.00 C ATOM 231 N THR 24 -47.159 -11.361 27.678 1.00 50.00 N ATOM 232 CA THR 24 -47.376 -12.540 26.895 1.00 50.00 C ATOM 233 C THR 24 -47.926 -13.546 27.850 1.00 50.00 C ATOM 234 O THR 24 -47.394 -13.729 28.944 1.00 50.00 O ATOM 235 H THR 24 -46.520 -11.353 28.311 1.00 50.00 H ATOM 236 CB THR 24 -46.076 -13.015 26.219 1.00 50.00 C ATOM 237 HG1 THR 24 -44.891 -12.251 24.975 1.00 50.00 H ATOM 238 OG1 THR 24 -45.591 -11.993 25.337 1.00 50.00 O ATOM 239 CG2 THR 24 -46.328 -14.277 25.407 1.00 50.00 C ATOM 240 N LYS 25 -49.034 -14.209 27.470 1.00 50.00 N ATOM 241 CA LYS 25 -49.637 -15.160 28.355 1.00 50.00 C ATOM 242 C LYS 25 -48.844 -16.424 28.328 1.00 50.00 C ATOM 243 O LYS 25 -48.395 -16.871 27.275 1.00 50.00 O ATOM 244 H LYS 25 -49.396 -14.055 26.660 1.00 50.00 H ATOM 245 CB LYS 25 -51.093 -15.413 27.958 1.00 50.00 C ATOM 246 CD LYS 25 -53.438 -14.542 27.759 1.00 50.00 C ATOM 247 CE LYS 25 -54.347 -13.335 27.927 1.00 50.00 C ATOM 248 CG LYS 25 -52.004 -14.211 28.139 1.00 50.00 C ATOM 249 HZ1 LYS 25 -56.253 -12.912 27.643 1.00 50.00 H ATOM 250 HZ2 LYS 25 -56.066 -14.296 28.041 1.00 50.00 H ATOM 251 HZ3 LYS 25 -55.772 -13.886 26.678 1.00 50.00 H ATOM 252 NZ LYS 25 -55.750 -13.638 27.533 1.00 50.00 N ATOM 253 N LEU 26 -48.647 -17.026 29.516 1.00 50.00 N ATOM 254 CA LEU 26 -47.940 -18.268 29.612 1.00 50.00 C ATOM 255 C LEU 26 -48.977 -19.273 30.006 1.00 50.00 C ATOM 256 O LEU 26 -49.617 -19.127 31.046 1.00 50.00 O ATOM 257 H LEU 26 -48.970 -16.634 30.260 1.00 50.00 H ATOM 258 CB LEU 26 -46.793 -18.156 30.617 1.00 50.00 C ATOM 259 CG LEU 26 -45.535 -17.432 30.132 1.00 50.00 C ATOM 260 CD1 LEU 26 -45.813 -15.952 29.920 1.00 50.00 C ATOM 261 CD2 LEU 26 -44.392 -17.619 31.118 1.00 50.00 C ATOM 262 N GLY 27 -49.169 -20.330 29.192 1.00 50.00 N ATOM 263 CA GLY 27 -50.203 -21.274 29.511 1.00 50.00 C ATOM 264 C GLY 27 -49.621 -22.647 29.471 1.00 50.00 C ATOM 265 O GLY 27 -48.444 -22.824 29.162 1.00 50.00 O ATOM 266 H GLY 27 -48.660 -20.450 28.459 1.00 50.00 H ATOM 267 N ALA 28 -50.441 -23.667 29.805 1.00 50.00 N ATOM 268 CA ALA 28 -49.934 -25.008 29.786 1.00 50.00 C ATOM 269 C ALA 28 -50.824 -25.863 28.943 1.00 50.00 C ATOM 270 O ALA 28 -52.049 -25.788 29.031 1.00 50.00 O ATOM 271 H ALA 28 -51.297 -23.513 30.038 1.00 50.00 H ATOM 272 CB ALA 28 -49.830 -25.556 31.202 1.00 50.00 C ATOM 273 N ILE 29 -50.203 -26.678 28.064 1.00 50.00 N ATOM 274 CA ILE 29 -50.914 -27.616 27.248 1.00 50.00 C ATOM 275 C ILE 29 -50.058 -28.842 27.154 1.00 50.00 C ATOM 276 O ILE 29 -48.836 -28.746 27.052 1.00 50.00 O ATOM 277 H ILE 29 -49.307 -26.617 28.002 1.00 50.00 H ATOM 278 CB ILE 29 -51.240 -27.025 25.863 1.00 50.00 C ATOM 279 CD1 ILE 29 -52.290 -25.006 24.716 1.00 50.00 C ATOM 280 CG1 ILE 29 -52.101 -25.769 26.009 1.00 50.00 C ATOM 281 CG2 ILE 29 -51.907 -28.070 24.981 1.00 50.00 C ATOM 282 N TYR 30 -50.692 -30.030 27.204 1.00 50.00 N ATOM 283 CA TYR 30 -50.008 -31.284 27.047 1.00 50.00 C ATOM 284 C TYR 30 -48.851 -31.319 27.998 1.00 50.00 C ATOM 285 O TYR 30 -47.767 -31.784 27.654 1.00 50.00 O ATOM 286 H TYR 30 -51.581 -30.017 27.342 1.00 50.00 H ATOM 287 CB TYR 30 -49.547 -31.465 25.600 1.00 50.00 C ATOM 288 CG TYR 30 -50.677 -31.483 24.594 1.00 50.00 C ATOM 289 HH TYR 30 -53.660 -30.908 21.272 1.00 50.00 H ATOM 290 OH TYR 30 -53.778 -31.517 21.824 1.00 50.00 O ATOM 291 CZ TYR 30 -52.753 -31.508 22.741 1.00 50.00 C ATOM 292 CD1 TYR 30 -50.721 -30.560 23.558 1.00 50.00 C ATOM 293 CE1 TYR 30 -51.750 -30.567 22.635 1.00 50.00 C ATOM 294 CD2 TYR 30 -51.696 -32.422 24.686 1.00 50.00 C ATOM 295 CE2 TYR 30 -52.733 -32.446 23.773 1.00 50.00 C ATOM 296 N ASP 31 -49.072 -30.812 29.225 1.00 50.00 N ATOM 297 CA ASP 31 -48.100 -30.779 30.284 1.00 50.00 C ATOM 298 C ASP 31 -46.802 -30.201 29.816 1.00 50.00 C ATOM 299 O ASP 31 -45.732 -30.706 30.155 1.00 50.00 O ATOM 300 H ASP 31 -49.896 -30.477 29.361 1.00 50.00 H ATOM 301 CB ASP 31 -47.873 -32.184 30.846 1.00 50.00 C ATOM 302 CG ASP 31 -49.106 -32.747 31.521 1.00 50.00 C ATOM 303 OD1 ASP 31 -49.919 -31.950 32.037 1.00 50.00 O ATOM 304 OD2 ASP 31 -49.262 -33.986 31.536 1.00 50.00 O ATOM 305 N LYS 32 -46.866 -29.111 29.026 1.00 50.00 N ATOM 306 CA LYS 32 -45.681 -28.427 28.592 1.00 50.00 C ATOM 307 C LYS 32 -45.968 -26.973 28.772 1.00 50.00 C ATOM 308 O LYS 32 -47.108 -26.541 28.619 1.00 50.00 O ATOM 309 H LYS 32 -47.676 -28.814 28.770 1.00 50.00 H ATOM 310 CB LYS 32 -45.349 -28.796 27.144 1.00 50.00 C ATOM 311 CD LYS 32 -44.786 -30.575 25.466 1.00 50.00 C ATOM 312 CE LYS 32 -44.545 -32.059 25.245 1.00 50.00 C ATOM 313 CG LYS 32 -45.062 -30.273 26.930 1.00 50.00 C ATOM 314 HZ1 LYS 32 -45.600 -33.724 25.339 1.00 50.00 H ATOM 315 HZ2 LYS 32 -46.415 -32.597 24.915 1.00 50.00 H ATOM 316 HZ3 LYS 32 -46.054 -32.747 26.315 1.00 50.00 H ATOM 317 NZ LYS 32 -45.777 -32.863 25.476 1.00 50.00 N ATOM 318 N THR 33 -44.943 -26.173 29.126 1.00 50.00 N ATOM 319 CA THR 33 -45.176 -24.768 29.276 1.00 50.00 C ATOM 320 C THR 33 -45.110 -24.168 27.909 1.00 50.00 C ATOM 321 O THR 33 -44.213 -24.488 27.131 1.00 50.00 O ATOM 322 H THR 33 -44.120 -26.511 29.268 1.00 50.00 H ATOM 323 CB THR 33 -44.151 -24.124 30.228 1.00 50.00 C ATOM 324 HG1 THR 33 -44.107 -25.538 31.466 1.00 50.00 H ATOM 325 OG1 THR 33 -44.258 -24.724 31.525 1.00 50.00 O ATOM 326 CG2 THR 33 -44.410 -22.632 30.360 1.00 50.00 C ATOM 327 N LYS 34 -46.065 -23.274 27.575 1.00 50.00 N ATOM 328 CA LYS 34 -46.034 -22.699 26.261 1.00 50.00 C ATOM 329 C LYS 34 -46.283 -21.231 26.356 1.00 50.00 C ATOM 330 O LYS 34 -46.827 -20.738 27.344 1.00 50.00 O ATOM 331 H LYS 34 -46.710 -23.036 28.155 1.00 50.00 H ATOM 332 CB LYS 34 -47.069 -23.373 25.357 1.00 50.00 C ATOM 333 CD LYS 34 -47.840 -25.442 24.162 1.00 50.00 C ATOM 334 CE LYS 34 -47.593 -26.923 23.932 1.00 50.00 C ATOM 335 CG LYS 34 -46.809 -24.850 25.111 1.00 50.00 C ATOM 336 HZ1 LYS 34 -48.399 -28.373 22.863 1.00 50.00 H ATOM 337 HZ2 LYS 34 -48.508 -27.089 22.191 1.00 50.00 H ATOM 338 HZ3 LYS 34 -49.397 -27.410 23.296 1.00 50.00 H ATOM 339 NZ LYS 34 -48.573 -27.507 22.974 1.00 50.00 N ATOM 340 N LYS 35 -45.848 -20.486 25.320 1.00 50.00 N ATOM 341 CA LYS 35 -46.036 -19.067 25.331 1.00 50.00 C ATOM 342 C LYS 35 -46.490 -18.639 23.974 1.00 50.00 C ATOM 343 O LYS 35 -46.122 -19.229 22.959 1.00 50.00 O ATOM 344 H LYS 35 -45.440 -20.880 24.621 1.00 50.00 H ATOM 345 CB LYS 35 -44.744 -18.358 25.740 1.00 50.00 C ATOM 346 CD LYS 35 -43.033 -17.888 27.516 1.00 50.00 C ATOM 347 CE LYS 35 -42.558 -18.223 28.920 1.00 50.00 C ATOM 348 CG LYS 35 -44.281 -18.676 27.152 1.00 50.00 C ATOM 349 HZ1 LYS 35 -41.105 -17.653 30.128 1.00 50.00 H ATOM 350 HZ2 LYS 35 -41.548 -16.564 29.273 1.00 50.00 H ATOM 351 HZ3 LYS 35 -40.692 -17.608 28.735 1.00 50.00 H ATOM 352 NZ LYS 35 -41.355 -17.433 29.303 1.00 50.00 N ATOM 353 N TYR 36 -47.314 -17.576 23.927 1.00 50.00 N ATOM 354 CA TYR 36 -47.798 -17.129 22.660 1.00 50.00 C ATOM 355 C TYR 36 -46.983 -15.936 22.296 1.00 50.00 C ATOM 356 O TYR 36 -46.907 -14.959 23.040 1.00 50.00 O ATOM 357 H TYR 36 -47.562 -17.148 24.679 1.00 50.00 H ATOM 358 CB TYR 36 -49.294 -16.817 22.737 1.00 50.00 C ATOM 359 CG TYR 36 -50.162 -18.035 22.956 1.00 50.00 C ATOM 360 HH TYR 36 -52.806 -21.679 22.842 1.00 50.00 H ATOM 361 OH TYR 36 -52.551 -21.383 23.574 1.00 50.00 O ATOM 362 CZ TYR 36 -51.761 -20.274 23.368 1.00 50.00 C ATOM 363 CD1 TYR 36 -50.428 -18.498 24.238 1.00 50.00 C ATOM 364 CE1 TYR 36 -51.221 -19.610 24.447 1.00 50.00 C ATOM 365 CD2 TYR 36 -50.715 -18.717 21.879 1.00 50.00 C ATOM 366 CE2 TYR 36 -51.510 -19.831 22.070 1.00 50.00 C ATOM 367 N TRP 37 -46.333 -16.008 21.120 1.00 50.00 N ATOM 368 CA TRP 37 -45.496 -14.942 20.667 1.00 50.00 C ATOM 369 C TRP 37 -46.014 -14.540 19.324 1.00 50.00 C ATOM 370 O TRP 37 -46.818 -15.247 18.718 1.00 50.00 O ATOM 371 H TRP 37 -46.435 -16.746 20.615 1.00 50.00 H ATOM 372 CB TRP 37 -44.034 -15.390 20.623 1.00 50.00 C ATOM 373 HB2 TRP 37 -43.392 -14.583 20.534 1.00 50.00 H ATOM 374 HB3 TRP 37 -43.868 -16.295 20.231 1.00 50.00 H ATOM 375 CG TRP 37 -43.468 -15.727 21.968 1.00 50.00 C ATOM 376 CD1 TRP 37 -43.186 -16.972 22.451 1.00 50.00 C ATOM 377 HE1 TRP 37 -42.417 -17.611 24.252 1.00 50.00 H ATOM 378 NE1 TRP 37 -42.680 -16.882 23.725 1.00 50.00 N ATOM 379 CD2 TRP 37 -43.115 -14.803 23.006 1.00 50.00 C ATOM 380 CE2 TRP 37 -42.627 -15.559 24.087 1.00 50.00 C ATOM 381 CH2 TRP 37 -42.250 -13.609 25.363 1.00 50.00 C ATOM 382 CZ2 TRP 37 -42.191 -14.972 25.273 1.00 50.00 C ATOM 383 CE3 TRP 37 -43.166 -13.411 23.125 1.00 50.00 C ATOM 384 CZ3 TRP 37 -42.732 -12.833 24.303 1.00 50.00 C ATOM 385 N VAL 38 -45.559 -13.377 18.824 1.00 50.00 N ATOM 386 CA VAL 38 -46.045 -12.893 17.567 1.00 50.00 C ATOM 387 C VAL 38 -45.732 -13.907 16.516 1.00 50.00 C ATOM 388 O VAL 38 -46.588 -14.251 15.704 1.00 50.00 O ATOM 389 H VAL 38 -44.948 -12.903 19.283 1.00 50.00 H ATOM 390 CB VAL 38 -45.438 -11.521 17.218 1.00 50.00 C ATOM 391 CG1 VAL 38 -45.795 -11.127 15.793 1.00 50.00 C ATOM 392 CG2 VAL 38 -45.913 -10.463 18.201 1.00 50.00 C ATOM 393 N TYR 39 -44.498 -14.443 16.517 1.00 50.00 N ATOM 394 CA TYR 39 -44.147 -15.380 15.491 1.00 50.00 C ATOM 395 C TYR 39 -45.045 -16.565 15.603 1.00 50.00 C ATOM 396 O TYR 39 -45.554 -17.059 14.599 1.00 50.00 O ATOM 397 H TYR 39 -43.896 -14.221 17.149 1.00 50.00 H ATOM 398 CB TYR 39 -42.675 -15.780 15.610 1.00 50.00 C ATOM 399 CG TYR 39 -41.709 -14.699 15.182 1.00 50.00 C ATOM 400 HH TYR 39 -38.568 -11.517 14.664 1.00 50.00 H ATOM 401 OH TYR 39 -39.047 -11.724 14.018 1.00 50.00 O ATOM 402 CZ TYR 39 -39.929 -12.708 14.403 1.00 50.00 C ATOM 403 CD1 TYR 39 -40.790 -14.170 16.079 1.00 50.00 C ATOM 404 CE1 TYR 39 -39.903 -13.181 15.696 1.00 50.00 C ATOM 405 CD2 TYR 39 -41.721 -14.209 13.882 1.00 50.00 C ATOM 406 CE2 TYR 39 -40.842 -13.221 13.481 1.00 50.00 C ATOM 407 N GLN 40 -45.265 -17.064 16.832 1.00 50.00 N ATOM 408 CA GLN 40 -46.150 -18.180 16.961 1.00 50.00 C ATOM 409 C GLN 40 -46.122 -18.610 18.385 1.00 50.00 C ATOM 410 O GLN 40 -45.677 -17.871 19.263 1.00 50.00 O ATOM 411 H GLN 40 -44.872 -16.715 17.562 1.00 50.00 H ATOM 412 CB GLN 40 -45.733 -19.307 16.013 1.00 50.00 C ATOM 413 CD GLN 40 -43.955 -20.957 15.310 1.00 50.00 C ATOM 414 CG GLN 40 -44.361 -19.890 16.308 1.00 50.00 C ATOM 415 OE1 GLN 40 -44.377 -20.933 14.154 1.00 50.00 O ATOM 416 HE21 GLN 40 -42.861 -22.557 15.205 1.00 50.00 H ATOM 417 HE22 GLN 40 -42.848 -21.882 16.610 1.00 50.00 H ATOM 418 NE2 GLN 40 -43.133 -21.900 15.756 1.00 50.00 N ATOM 419 N GLY 41 -46.634 -19.827 18.657 1.00 50.00 N ATOM 420 CA GLY 41 -46.609 -20.316 20.001 1.00 50.00 C ATOM 421 C GLY 41 -45.427 -21.220 20.100 1.00 50.00 C ATOM 422 O GLY 41 -45.257 -22.122 19.280 1.00 50.00 O ATOM 423 H GLY 41 -46.989 -20.330 18.001 1.00 50.00 H ATOM 424 N LYS 42 -44.582 -21.010 21.130 1.00 50.00 N ATOM 425 CA LYS 42 -43.396 -21.805 21.249 1.00 50.00 C ATOM 426 C LYS 42 -43.400 -22.457 22.594 1.00 50.00 C ATOM 427 O LYS 42 -43.810 -21.865 23.592 1.00 50.00 O ATOM 428 H LYS 42 -44.760 -20.373 21.740 1.00 50.00 H ATOM 429 CB LYS 42 -42.149 -20.941 21.047 1.00 50.00 C ATOM 430 CD LYS 42 -40.715 -19.587 19.495 1.00 50.00 C ATOM 431 CE LYS 42 -40.593 -18.985 18.105 1.00 50.00 C ATOM 432 CG LYS 42 -42.002 -20.383 19.641 1.00 50.00 C ATOM 433 HZ1 LYS 42 -40.408 -19.645 16.254 1.00 50.00 H ATOM 434 HZ2 LYS 42 -41.200 -20.551 17.069 1.00 50.00 H ATOM 435 HZ3 LYS 42 -39.753 -20.527 17.206 1.00 50.00 H ATOM 436 NZ LYS 42 -40.477 -20.033 17.053 1.00 50.00 N ATOM 437 N PRO 43 -42.975 -23.689 22.628 1.00 50.00 N ATOM 438 CA PRO 43 -42.861 -24.339 23.903 1.00 50.00 C ATOM 439 C PRO 43 -41.652 -23.846 24.631 1.00 50.00 C ATOM 440 O PRO 43 -40.635 -23.590 23.987 1.00 50.00 O ATOM 441 CB PRO 43 -42.749 -25.825 23.553 1.00 50.00 C ATOM 442 CD PRO 43 -42.959 -24.646 21.480 1.00 50.00 C ATOM 443 CG PRO 43 -43.318 -25.928 22.177 1.00 50.00 C ATOM 444 N VAL 44 -41.732 -23.704 25.969 1.00 50.00 N ATOM 445 CA VAL 44 -40.568 -23.295 26.694 1.00 50.00 C ATOM 446 C VAL 44 -40.137 -24.474 27.507 1.00 50.00 C ATOM 447 O VAL 44 -40.856 -24.950 28.384 1.00 50.00 O ATOM 448 H VAL 44 -42.503 -23.861 26.408 1.00 50.00 H ATOM 449 CB VAL 44 -40.850 -22.057 27.565 1.00 50.00 C ATOM 450 CG1 VAL 44 -39.609 -21.665 28.353 1.00 50.00 C ATOM 451 CG2 VAL 44 -41.328 -20.897 26.704 1.00 50.00 C ATOM 452 N MET 45 -38.927 -24.985 27.223 1.00 50.00 N ATOM 453 CA MET 45 -38.465 -26.151 27.914 1.00 50.00 C ATOM 454 C MET 45 -37.874 -25.733 29.220 1.00 50.00 C ATOM 455 O MET 45 -37.561 -24.566 29.452 1.00 50.00 O ATOM 456 H MET 45 -38.407 -24.597 26.600 1.00 50.00 H ATOM 457 CB MET 45 -37.448 -26.912 27.061 1.00 50.00 C ATOM 458 SD MET 45 -39.345 -28.599 25.954 1.00 50.00 S ATOM 459 CE MET 45 -38.451 -30.020 26.578 1.00 50.00 C ATOM 460 CG MET 45 -38.002 -27.418 25.739 1.00 50.00 C ATOM 461 N PRO 46 -37.754 -26.695 30.093 1.00 50.00 N ATOM 462 CA PRO 46 -37.173 -26.447 31.385 1.00 50.00 C ATOM 463 C PRO 46 -35.700 -26.241 31.226 1.00 50.00 C ATOM 464 O PRO 46 -35.152 -26.630 30.196 1.00 50.00 O ATOM 465 CB PRO 46 -37.502 -27.707 32.187 1.00 50.00 C ATOM 466 CD PRO 46 -38.413 -28.011 29.995 1.00 50.00 C ATOM 467 CG PRO 46 -38.632 -28.338 31.445 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 103.95 30.9 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 107.58 20.6 34 100.0 34 ARMSMC SURFACE . . . . . . . . 109.39 26.8 56 100.0 56 ARMSMC BURIED . . . . . . . . 73.44 50.0 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.11 40.6 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 84.57 37.9 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 86.87 41.2 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 88.22 33.3 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 56.96 80.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.59 56.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 46.16 57.1 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 28.31 69.2 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 58.69 59.1 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 48.73 33.3 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 44.26 75.0 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 44.21 85.7 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 82.11 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 44.26 75.0 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.56 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 85.56 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 90.60 50.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 85.56 50.0 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.74 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.74 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2212 CRMSCA SECONDARY STRUCTURE . . 7.49 17 100.0 17 CRMSCA SURFACE . . . . . . . . 7.66 29 100.0 29 CRMSCA BURIED . . . . . . . . 8.12 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.85 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 7.61 85 100.0 85 CRMSMC SURFACE . . . . . . . . 7.81 143 100.0 143 CRMSMC BURIED . . . . . . . . 8.02 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.07 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 9.92 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 9.12 84 100.0 84 CRMSSC SURFACE . . . . . . . . 10.07 127 100.0 127 CRMSSC BURIED . . . . . . . . 10.07 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.03 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 8.41 152 100.0 152 CRMSALL SURFACE . . . . . . . . 9.01 243 100.0 243 CRMSALL BURIED . . . . . . . . 9.10 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 42.945 0.758 0.788 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 42.979 0.757 0.786 17 100.0 17 ERRCA SURFACE . . . . . . . . 43.051 0.762 0.791 29 100.0 29 ERRCA BURIED . . . . . . . . 42.435 0.742 0.774 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 42.855 0.756 0.786 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 42.883 0.755 0.784 85 100.0 85 ERRMC SURFACE . . . . . . . . 42.897 0.757 0.787 143 100.0 143 ERRMC BURIED . . . . . . . . 42.652 0.749 0.781 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 40.726 0.694 0.739 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 40.900 0.699 0.743 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 41.258 0.706 0.745 84 100.0 84 ERRSC SURFACE . . . . . . . . 40.793 0.697 0.741 127 100.0 127 ERRSC BURIED . . . . . . . . 40.434 0.684 0.729 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.811 0.726 0.763 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 42.078 0.731 0.765 152 100.0 152 ERRALL SURFACE . . . . . . . . 41.868 0.728 0.765 243 100.0 243 ERRALL BURIED . . . . . . . . 41.554 0.717 0.755 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 5 9 26 35 35 DISTCA CA (P) 0.00 2.86 14.29 25.71 74.29 35 DISTCA CA (RMS) 0.00 1.08 1.94 2.89 6.21 DISTCA ALL (N) 0 8 26 65 201 296 296 DISTALL ALL (P) 0.00 2.70 8.78 21.96 67.91 296 DISTALL ALL (RMS) 0.00 1.34 2.12 3.38 6.61 DISTALL END of the results output