####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS063_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS063_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 20 - 44 4.99 9.64 LONGEST_CONTINUOUS_SEGMENT: 25 22 - 46 4.98 10.94 LCS_AVERAGE: 70.61 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 16 - 31 1.84 10.05 LCS_AVERAGE: 39.59 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 16 - 28 0.64 10.69 LCS_AVERAGE: 25.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 3 3 22 0 3 3 3 3 3 5 5 7 7 8 8 17 17 17 17 18 21 22 23 LCS_GDT F 13 F 13 3 5 24 0 3 3 4 5 5 9 14 16 16 16 16 20 20 21 25 26 28 28 29 LCS_GDT H 14 H 14 4 5 24 3 4 5 6 9 14 15 15 16 18 19 19 20 22 24 26 27 28 29 30 LCS_GDT Y 15 Y 15 4 15 24 3 4 4 6 9 14 15 17 17 18 19 19 21 22 24 26 27 28 29 30 LCS_GDT T 16 T 16 13 16 24 9 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT V 17 V 17 13 16 24 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT T 18 T 18 13 16 24 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT D 19 D 19 13 16 24 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT I 20 I 20 13 16 25 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT K 21 K 21 13 16 25 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT D 22 D 22 13 16 25 10 12 13 13 14 14 16 17 17 18 20 22 24 25 26 27 27 28 29 30 LCS_GDT L 23 L 23 13 16 25 10 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT T 24 T 24 13 16 25 10 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT K 25 K 25 13 16 25 10 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT L 26 L 26 13 16 25 10 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT G 27 G 27 13 16 25 8 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT A 28 A 28 13 16 25 4 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT I 29 I 29 8 16 25 4 5 9 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT Y 30 Y 30 6 16 25 3 5 6 8 11 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT D 31 D 31 6 16 25 3 5 6 8 11 13 16 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT K 32 K 32 3 5 25 3 3 3 4 8 14 16 17 19 19 20 21 22 25 26 27 27 28 29 30 LCS_GDT T 33 T 33 3 14 25 3 6 10 12 12 14 14 14 17 18 19 19 21 22 23 26 27 28 29 30 LCS_GDT K 34 K 34 5 14 25 3 4 6 7 13 14 14 14 14 14 16 17 19 20 23 26 27 28 29 30 LCS_GDT K 35 K 35 9 14 25 3 6 10 12 13 14 14 14 17 18 20 21 22 24 26 27 27 28 29 30 LCS_GDT Y 36 Y 36 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT W 37 W 37 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT V 38 V 38 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT Y 39 Y 39 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT Q 40 Q 40 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT G 41 G 41 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT K 42 K 42 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT P 43 P 43 9 14 25 3 8 10 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT V 44 V 44 9 14 25 3 6 9 12 13 14 14 17 19 19 20 22 24 25 26 27 27 28 29 30 LCS_GDT M 45 M 45 5 14 25 3 4 7 11 13 14 14 16 17 18 19 20 23 24 26 26 27 28 28 28 LCS_GDT P 46 P 46 5 14 25 3 6 9 12 13 14 14 16 17 18 19 19 21 22 24 24 25 25 26 27 LCS_AVERAGE LCS_A: 45.28 ( 25.63 39.59 70.61 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 13 14 14 16 17 19 19 20 22 24 25 26 27 27 28 29 30 GDT PERCENT_AT 28.57 34.29 37.14 37.14 40.00 40.00 45.71 48.57 54.29 54.29 57.14 62.86 68.57 71.43 74.29 77.14 77.14 80.00 82.86 85.71 GDT RMS_LOCAL 0.30 0.45 0.64 0.64 1.02 1.02 1.84 2.41 3.20 3.20 3.46 4.33 4.54 4.68 4.83 5.14 5.14 5.35 5.93 6.21 GDT RMS_ALL_AT 11.27 11.08 10.69 10.69 10.33 10.33 10.05 10.64 11.03 11.03 10.95 9.23 9.17 9.00 9.18 8.65 8.65 8.80 8.31 8.25 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: Y 15 Y 15 # possible swapping detected: Y 36 Y 36 # possible swapping detected: Y 39 Y 39 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 18.623 0 0.420 0.956 22.074 0.000 0.000 LGA F 13 F 13 11.886 0 0.646 1.383 14.626 0.119 0.043 LGA H 14 H 14 8.308 0 0.614 1.155 9.604 13.452 9.810 LGA Y 15 Y 15 5.585 0 0.066 0.404 17.675 32.024 11.548 LGA T 16 T 16 1.613 0 0.594 0.621 5.537 68.810 53.878 LGA V 17 V 17 2.359 0 0.108 0.859 3.196 66.786 61.633 LGA T 18 T 18 1.796 0 0.073 0.137 2.034 75.119 72.993 LGA D 19 D 19 1.044 0 0.078 0.160 1.397 81.429 88.333 LGA I 20 I 20 1.627 0 0.038 0.067 1.862 75.000 73.929 LGA K 21 K 21 1.795 0 0.045 1.126 6.096 75.000 54.868 LGA D 22 D 22 1.286 0 0.088 0.124 1.484 83.690 82.560 LGA L 23 L 23 1.327 0 0.064 0.178 1.686 81.429 79.286 LGA T 24 T 24 0.996 0 0.047 1.118 3.182 88.214 78.435 LGA K 25 K 25 0.775 0 0.058 0.887 3.579 90.476 76.825 LGA L 26 L 26 0.720 0 0.058 0.893 2.846 90.476 85.179 LGA G 27 G 27 0.522 0 0.045 0.045 0.830 92.857 92.857 LGA A 28 A 28 1.100 0 0.026 0.030 1.509 81.548 81.524 LGA I 29 I 29 2.596 0 0.037 1.420 6.866 59.048 45.298 LGA Y 30 Y 30 4.021 0 0.615 1.145 10.360 36.190 20.714 LGA D 31 D 31 5.685 0 0.576 0.795 10.939 30.476 16.548 LGA K 32 K 32 4.391 0 0.418 0.742 7.089 26.905 27.302 LGA T 33 T 33 10.368 0 0.360 1.421 12.618 1.190 0.680 LGA K 34 K 34 10.695 0 0.286 0.970 17.339 0.238 0.106 LGA K 35 K 35 8.792 0 0.057 0.057 10.191 2.143 1.958 LGA Y 36 Y 36 9.045 0 0.072 1.391 9.887 5.238 7.857 LGA W 37 W 37 9.166 0 0.067 1.023 12.923 0.476 0.170 LGA V 38 V 38 11.603 0 0.102 0.188 13.513 0.000 0.000 LGA Y 39 Y 39 13.676 0 0.066 1.379 17.468 0.000 0.000 LGA Q 40 Q 40 17.983 0 0.040 0.458 23.126 0.000 0.000 LGA G 41 G 41 18.634 0 0.049 0.049 19.871 0.000 0.000 LGA K 42 K 42 19.141 0 0.145 1.075 24.025 0.000 0.000 LGA P 43 P 43 16.313 0 0.072 0.319 19.543 0.000 0.000 LGA V 44 V 44 16.331 0 0.109 1.151 17.124 0.000 0.000 LGA M 45 M 45 19.683 0 0.611 1.325 23.169 0.000 0.000 LGA P 46 P 46 23.036 0 0.063 0.092 24.604 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 8.137 7.974 9.076 35.952 32.124 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 17 2.41 49.286 46.740 0.677 LGA_LOCAL RMSD: 2.410 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.641 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 8.137 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.898149 * X + 0.312823 * Y + -0.308984 * Z + -26.975794 Y_new = -0.373720 * X + -0.913352 * Y + 0.161622 * Z + -15.202829 Z_new = -0.231652 * X + 0.260634 * Y + 0.937234 * Z + 24.552111 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.747284 0.233776 0.271236 [DEG: -157.4078 13.3944 15.5407 ] ZXZ: -2.052734 0.356186 -0.726594 [DEG: -117.6130 20.4079 -41.6308 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS063_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS063_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 17 2.41 46.740 8.14 REMARK ---------------------------------------------------------- MOLECULE T0548TS063_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 106 N HIS 12 -30.327 -14.400 34.459 1.00 50.00 N ATOM 107 CA HIS 12 -31.114 -13.773 33.406 1.00 50.00 C ATOM 108 C HIS 12 -32.185 -14.721 32.969 1.00 50.00 C ATOM 109 O HIS 12 -33.296 -14.704 33.496 1.00 50.00 O ATOM 110 H HIS 12 -29.457 -14.582 34.321 1.00 50.00 H ATOM 111 CB HIS 12 -30.216 -13.372 32.233 1.00 50.00 C ATOM 112 CG HIS 12 -30.946 -12.679 31.124 1.00 50.00 C ATOM 113 HD1 HIS 12 -29.375 -11.889 30.047 1.00 50.00 H ATOM 114 ND1 HIS 12 -30.297 -11.988 30.124 1.00 50.00 N ATOM 115 CE1 HIS 12 -31.212 -11.479 29.279 1.00 50.00 C ATOM 116 CD2 HIS 12 -32.342 -12.506 30.749 1.00 50.00 C ATOM 117 NE2 HIS 12 -32.440 -11.786 29.648 1.00 50.00 N ATOM 118 N PHE 13 -31.887 -15.589 31.982 1.00 50.00 N ATOM 119 CA PHE 13 -32.815 -16.581 31.460 1.00 50.00 C ATOM 120 C PHE 13 -33.170 -17.537 32.556 1.00 50.00 C ATOM 121 O PHE 13 -34.167 -18.252 32.470 1.00 50.00 O ATOM 122 H PHE 13 -31.055 -15.529 31.644 1.00 50.00 H ATOM 123 CB PHE 13 -32.201 -17.312 30.264 1.00 50.00 C ATOM 124 CG PHE 13 -31.074 -18.234 30.631 1.00 50.00 C ATOM 125 CZ PHE 13 -28.982 -19.935 31.309 1.00 50.00 C ATOM 126 CD1 PHE 13 -31.323 -19.548 30.988 1.00 50.00 C ATOM 127 CE1 PHE 13 -30.285 -20.397 31.325 1.00 50.00 C ATOM 128 CD2 PHE 13 -29.763 -17.788 30.621 1.00 50.00 C ATOM 129 CE2 PHE 13 -28.726 -18.636 30.958 1.00 50.00 C ATOM 130 N HIS 14 -32.361 -17.583 33.632 1.00 50.00 N ATOM 131 CA HIS 14 -32.558 -18.478 34.763 1.00 50.00 C ATOM 132 C HIS 14 -33.758 -18.026 35.536 1.00 50.00 C ATOM 133 O HIS 14 -34.412 -18.822 36.206 1.00 50.00 O ATOM 134 H HIS 14 -31.664 -17.015 33.624 1.00 50.00 H ATOM 135 CB HIS 14 -31.308 -18.508 35.645 1.00 50.00 C ATOM 136 CG HIS 14 -31.385 -19.498 36.766 1.00 50.00 C ATOM 137 ND1 HIS 14 -31.349 -20.860 36.560 1.00 50.00 N ATOM 138 CE1 HIS 14 -31.435 -21.485 37.748 1.00 50.00 C ATOM 139 CD2 HIS 14 -31.502 -19.419 38.215 1.00 50.00 C ATOM 140 HE2 HIS 14 -31.597 -20.834 39.649 1.00 50.00 H ATOM 141 NE2 HIS 14 -31.527 -20.626 38.745 1.00 50.00 N ATOM 142 N TYR 15 -34.089 -16.722 35.469 1.00 50.00 N ATOM 143 CA TYR 15 -35.198 -16.124 36.199 1.00 50.00 C ATOM 144 C TYR 15 -36.467 -16.815 35.806 1.00 50.00 C ATOM 145 O TYR 15 -36.730 -17.027 34.624 1.00 50.00 O ATOM 146 H TYR 15 -33.577 -16.213 34.932 1.00 50.00 H ATOM 147 CB TYR 15 -35.275 -14.622 35.918 1.00 50.00 C ATOM 148 CG TYR 15 -34.157 -13.823 36.549 1.00 50.00 C ATOM 149 HH TYR 15 -30.925 -11.906 39.032 1.00 50.00 H ATOM 150 OH TYR 15 -31.081 -11.616 38.269 1.00 50.00 O ATOM 151 CZ TYR 15 -32.099 -12.348 37.701 1.00 50.00 C ATOM 152 CD1 TYR 15 -33.553 -12.780 35.860 1.00 50.00 C ATOM 153 CE1 TYR 15 -32.530 -12.044 36.428 1.00 50.00 C ATOM 154 CD2 TYR 15 -33.709 -14.115 37.831 1.00 50.00 C ATOM 155 CE2 TYR 15 -32.689 -13.390 38.415 1.00 50.00 C ATOM 156 N THR 16 -37.302 -17.193 36.793 1.00 50.00 N ATOM 157 CA THR 16 -38.569 -17.876 36.573 1.00 50.00 C ATOM 158 C THR 16 -39.589 -16.876 36.126 1.00 50.00 C ATOM 159 O THR 16 -40.419 -17.164 35.266 1.00 50.00 O ATOM 160 H THR 16 -37.036 -16.999 37.631 1.00 50.00 H ATOM 161 CB THR 16 -39.047 -18.605 37.842 1.00 50.00 C ATOM 162 HG1 THR 16 -39.776 -17.091 38.684 1.00 50.00 H ATOM 163 OG1 THR 16 -39.211 -17.659 38.906 1.00 50.00 O ATOM 164 CG2 THR 16 -38.027 -19.648 38.273 1.00 50.00 C ATOM 165 N VAL 17 -39.562 -15.657 36.700 1.00 50.00 N ATOM 166 CA VAL 17 -40.507 -14.593 36.399 1.00 50.00 C ATOM 167 C VAL 17 -39.958 -13.754 35.289 1.00 50.00 C ATOM 168 O VAL 17 -40.706 -13.126 34.542 1.00 50.00 O ATOM 169 H VAL 17 -38.908 -15.521 37.303 1.00 50.00 H ATOM 170 CB VAL 17 -40.805 -13.735 37.642 1.00 50.00 C ATOM 171 CG1 VAL 17 -39.605 -12.868 37.992 1.00 50.00 C ATOM 172 CG2 VAL 17 -42.038 -12.874 37.413 1.00 50.00 C ATOM 173 N THR 18 -38.618 -13.714 35.140 1.00 50.00 N ATOM 174 CA THR 18 -37.932 -12.918 34.134 1.00 50.00 C ATOM 175 C THR 18 -38.194 -13.510 32.784 1.00 50.00 C ATOM 176 O THR 18 -38.288 -12.795 31.789 1.00 50.00 O ATOM 177 H THR 18 -38.145 -14.222 35.712 1.00 50.00 H ATOM 178 CB THR 18 -36.419 -12.845 34.408 1.00 50.00 C ATOM 179 HG1 THR 18 -36.558 -12.670 36.275 1.00 50.00 H ATOM 180 OG1 THR 18 -36.190 -12.223 35.679 1.00 50.00 O ATOM 181 CG2 THR 18 -35.722 -12.024 33.334 1.00 50.00 C ATOM 182 N ASP 19 -38.320 -14.849 32.704 1.00 50.00 N ATOM 183 CA ASP 19 -38.605 -15.569 31.471 1.00 50.00 C ATOM 184 C ASP 19 -40.008 -15.266 31.045 1.00 50.00 C ATOM 185 O ASP 19 -40.297 -15.162 29.855 1.00 50.00 O ATOM 186 H ASP 19 -38.216 -15.301 33.475 1.00 50.00 H ATOM 187 CB ASP 19 -38.399 -17.073 31.668 1.00 50.00 C ATOM 188 CG ASP 19 -36.936 -17.446 31.806 1.00 50.00 C ATOM 189 OD1 ASP 19 -36.074 -16.603 31.481 1.00 50.00 O ATOM 190 OD2 ASP 19 -36.652 -18.583 32.239 1.00 50.00 O ATOM 191 N ILE 20 -40.935 -15.111 32.011 1.00 50.00 N ATOM 192 CA ILE 20 -42.330 -14.787 31.758 1.00 50.00 C ATOM 193 C ILE 20 -42.408 -13.429 31.132 1.00 50.00 C ATOM 194 O ILE 20 -43.129 -13.224 30.159 1.00 50.00 O ATOM 195 H ILE 20 -40.644 -15.222 32.856 1.00 50.00 H ATOM 196 CB ILE 20 -43.168 -14.850 33.048 1.00 50.00 C ATOM 197 CD1 ILE 20 -43.818 -16.415 34.953 1.00 50.00 C ATOM 198 CG1 ILE 20 -43.272 -16.293 33.548 1.00 50.00 C ATOM 199 CG2 ILE 20 -44.538 -14.227 32.825 1.00 50.00 C ATOM 200 N LYS 21 -41.660 -12.448 31.674 1.00 50.00 N ATOM 201 CA LYS 21 -41.619 -11.082 31.173 1.00 50.00 C ATOM 202 C LYS 21 -41.090 -11.093 29.774 1.00 50.00 C ATOM 203 O LYS 21 -41.545 -10.335 28.921 1.00 50.00 O ATOM 204 H LYS 21 -41.164 -12.680 32.388 1.00 50.00 H ATOM 205 CB LYS 21 -40.760 -10.203 32.084 1.00 50.00 C ATOM 206 CD LYS 21 -40.471 -9.056 34.297 1.00 50.00 C ATOM 207 CE LYS 21 -41.090 -8.781 35.658 1.00 50.00 C ATOM 208 CG LYS 21 -41.385 -9.916 33.439 1.00 50.00 C ATOM 209 HZ1 LYS 21 -40.580 -7.833 37.312 1.00 50.00 H ATOM 210 HZ2 LYS 21 -40.018 -7.194 36.135 1.00 50.00 H ATOM 211 HZ3 LYS 21 -39.424 -8.415 36.651 1.00 50.00 H ATOM 212 NZ LYS 21 -40.187 -7.976 36.526 1.00 50.00 N ATOM 213 N ASP 22 -40.100 -11.962 29.487 1.00 50.00 N ATOM 214 CA ASP 22 -39.483 -12.094 28.175 1.00 50.00 C ATOM 215 C ASP 22 -40.503 -12.607 27.209 1.00 50.00 C ATOM 216 O ASP 22 -40.657 -12.074 26.112 1.00 50.00 O ATOM 217 H ASP 22 -39.822 -12.481 30.168 1.00 50.00 H ATOM 218 CB ASP 22 -38.269 -13.021 28.245 1.00 50.00 C ATOM 219 CG ASP 22 -37.097 -12.394 28.975 1.00 50.00 C ATOM 220 OD1 ASP 22 -37.119 -11.163 29.187 1.00 50.00 O ATOM 221 OD2 ASP 22 -36.158 -13.133 29.336 1.00 50.00 O ATOM 222 N LEU 23 -41.241 -13.671 27.584 1.00 50.00 N ATOM 223 CA LEU 23 -42.268 -14.284 26.757 1.00 50.00 C ATOM 224 C LEU 23 -43.347 -13.278 26.497 1.00 50.00 C ATOM 225 O LEU 23 -43.923 -13.239 25.411 1.00 50.00 O ATOM 226 H LEU 23 -41.065 -14.002 28.402 1.00 50.00 H ATOM 227 CB LEU 23 -42.829 -15.535 27.438 1.00 50.00 C ATOM 228 CG LEU 23 -41.883 -16.733 27.539 1.00 50.00 C ATOM 229 CD1 LEU 23 -42.498 -17.833 28.391 1.00 50.00 C ATOM 230 CD2 LEU 23 -41.538 -17.265 26.157 1.00 50.00 C ATOM 231 N THR 24 -43.657 -12.424 27.491 1.00 50.00 N ATOM 232 CA THR 24 -44.655 -11.371 27.380 1.00 50.00 C ATOM 233 C THR 24 -44.160 -10.332 26.422 1.00 50.00 C ATOM 234 O THR 24 -44.898 -9.872 25.554 1.00 50.00 O ATOM 235 H THR 24 -43.204 -12.535 28.260 1.00 50.00 H ATOM 236 CB THR 24 -44.966 -10.741 28.750 1.00 50.00 C ATOM 237 HG1 THR 24 -44.940 -12.347 29.725 1.00 50.00 H ATOM 238 OG1 THR 24 -45.497 -11.738 29.629 1.00 50.00 O ATOM 239 CG2 THR 24 -45.990 -9.626 28.603 1.00 50.00 C ATOM 240 N LYS 25 -42.882 -9.924 26.548 1.00 50.00 N ATOM 241 CA LYS 25 -42.258 -8.921 25.699 1.00 50.00 C ATOM 242 C LYS 25 -42.198 -9.443 24.297 1.00 50.00 C ATOM 243 O LYS 25 -42.270 -8.680 23.337 1.00 50.00 O ATOM 244 H LYS 25 -42.408 -10.313 27.208 1.00 50.00 H ATOM 245 CB LYS 25 -40.864 -8.570 26.221 1.00 50.00 C ATOM 246 CD LYS 25 -39.454 -7.477 27.986 1.00 50.00 C ATOM 247 CE LYS 25 -39.458 -6.685 29.284 1.00 50.00 C ATOM 248 CG LYS 25 -40.868 -7.788 27.525 1.00 50.00 C ATOM 249 HZ1 LYS 25 -38.118 -5.944 30.529 1.00 50.00 H ATOM 250 HZ2 LYS 25 -37.636 -5.936 29.158 1.00 50.00 H ATOM 251 HZ3 LYS 25 -37.654 -7.177 29.914 1.00 50.00 H ATOM 252 NZ LYS 25 -38.078 -6.408 29.770 1.00 50.00 N ATOM 253 N LEU 26 -42.061 -10.774 24.131 1.00 50.00 N ATOM 254 CA LEU 26 -42.003 -11.432 22.834 1.00 50.00 C ATOM 255 C LEU 26 -43.376 -11.455 22.238 1.00 50.00 C ATOM 256 O LEU 26 -43.549 -11.793 21.069 1.00 50.00 O ATOM 257 H LEU 26 -42.005 -11.261 24.885 1.00 50.00 H ATOM 258 CB LEU 26 -41.435 -12.846 22.975 1.00 50.00 C ATOM 259 CG LEU 26 -39.914 -12.977 22.892 1.00 50.00 C ATOM 260 CD1 LEU 26 -39.239 -12.069 23.908 1.00 50.00 C ATOM 261 CD2 LEU 26 -39.486 -14.421 23.105 1.00 50.00 C ATOM 262 N GLY 27 -44.405 -11.093 23.029 1.00 50.00 N ATOM 263 CA GLY 27 -45.791 -11.035 22.587 1.00 50.00 C ATOM 264 C GLY 27 -46.500 -12.270 23.044 1.00 50.00 C ATOM 265 O GLY 27 -47.607 -12.563 22.597 1.00 50.00 O ATOM 266 H GLY 27 -44.194 -10.879 23.878 1.00 50.00 H ATOM 267 N ALA 28 -45.881 -13.044 23.958 1.00 50.00 N ATOM 268 CA ALA 28 -46.505 -14.176 24.627 1.00 50.00 C ATOM 269 C ALA 28 -47.094 -13.710 25.922 1.00 50.00 C ATOM 270 O ALA 28 -46.742 -12.647 26.428 1.00 50.00 O ATOM 271 H ALA 28 -45.029 -12.824 24.146 1.00 50.00 H ATOM 272 CB ALA 28 -45.490 -15.286 24.849 1.00 50.00 C ATOM 273 N ILE 29 -48.018 -14.497 26.506 1.00 50.00 N ATOM 274 CA ILE 29 -48.515 -14.305 27.860 1.00 50.00 C ATOM 275 C ILE 29 -47.668 -15.099 28.806 1.00 50.00 C ATOM 276 O ILE 29 -47.248 -16.211 28.493 1.00 50.00 O ATOM 277 H ILE 29 -48.330 -15.176 26.005 1.00 50.00 H ATOM 278 CB ILE 29 -49.998 -14.701 27.980 1.00 50.00 C ATOM 279 CD1 ILE 29 -50.766 -12.394 27.214 1.00 50.00 C ATOM 280 CG1 ILE 29 -50.847 -13.890 27.000 1.00 50.00 C ATOM 281 CG2 ILE 29 -50.479 -14.539 29.414 1.00 50.00 C ATOM 282 N TYR 30 -47.387 -14.551 30.004 1.00 50.00 N ATOM 283 CA TYR 30 -46.616 -15.215 31.044 1.00 50.00 C ATOM 284 C TYR 30 -47.525 -16.105 31.831 1.00 50.00 C ATOM 285 O TYR 30 -47.071 -16.998 32.543 1.00 50.00 O ATOM 286 H TYR 30 -47.709 -13.721 30.142 1.00 50.00 H ATOM 287 CB TYR 30 -45.933 -14.184 31.945 1.00 50.00 C ATOM 288 CG TYR 30 -46.892 -13.384 32.798 1.00 50.00 C ATOM 289 HH TYR 30 -49.711 -11.632 35.838 1.00 50.00 H ATOM 290 OH TYR 30 -49.531 -11.199 35.153 1.00 50.00 O ATOM 291 CZ TYR 30 -48.658 -11.920 34.373 1.00 50.00 C ATOM 292 CD1 TYR 30 -47.355 -13.885 34.008 1.00 50.00 C ATOM 293 CE1 TYR 30 -48.233 -13.163 34.793 1.00 50.00 C ATOM 294 CD2 TYR 30 -47.332 -12.132 32.390 1.00 50.00 C ATOM 295 CE2 TYR 30 -48.208 -11.394 33.162 1.00 50.00 C ATOM 296 N ASP 31 -48.851 -15.890 31.730 1.00 50.00 N ATOM 297 CA ASP 31 -49.860 -16.663 32.439 1.00 50.00 C ATOM 298 C ASP 31 -49.628 -18.119 32.177 1.00 50.00 C ATOM 299 O ASP 31 -49.716 -18.944 33.084 1.00 50.00 O ATOM 300 H ASP 31 -49.100 -15.220 31.182 1.00 50.00 H ATOM 301 CB ASP 31 -51.265 -16.238 32.006 1.00 50.00 C ATOM 302 CG ASP 31 -51.644 -14.866 32.527 1.00 50.00 C ATOM 303 OD1 ASP 31 -50.947 -14.360 33.432 1.00 50.00 O ATOM 304 OD2 ASP 31 -52.638 -14.296 32.030 1.00 50.00 O ATOM 305 N LYS 32 -49.323 -18.486 30.917 1.00 50.00 N ATOM 306 CA LYS 32 -49.063 -19.858 30.507 1.00 50.00 C ATOM 307 C LYS 32 -47.616 -19.992 30.147 1.00 50.00 C ATOM 308 O LYS 32 -47.253 -20.781 29.279 1.00 50.00 O ATOM 309 H LYS 32 -49.285 -17.821 30.313 1.00 50.00 H ATOM 310 CB LYS 32 -49.965 -20.246 29.334 1.00 50.00 C ATOM 311 CD LYS 32 -51.818 -21.254 30.696 1.00 50.00 C ATOM 312 CE LYS 32 -53.312 -21.260 30.969 1.00 50.00 C ATOM 313 CG LYS 32 -51.451 -20.209 29.655 1.00 50.00 C ATOM 314 HZ1 LYS 32 -54.560 -22.217 32.161 1.00 50.00 H ATOM 315 HZ2 LYS 32 -53.259 -22.033 32.785 1.00 50.00 H ATOM 316 HZ3 LYS 32 -53.441 -23.058 31.770 1.00 50.00 H ATOM 317 NZ LYS 32 -53.680 -22.241 32.028 1.00 50.00 N ATOM 318 N THR 33 -46.735 -19.215 30.807 1.00 50.00 N ATOM 319 CA THR 33 -45.297 -19.242 30.583 1.00 50.00 C ATOM 320 C THR 33 -45.024 -18.946 29.141 1.00 50.00 C ATOM 321 O THR 33 -44.222 -19.621 28.499 1.00 50.00 O ATOM 322 H THR 33 -47.084 -18.656 31.419 1.00 50.00 H ATOM 323 CB THR 33 -44.690 -20.601 30.980 1.00 50.00 C ATOM 324 HG1 THR 33 -42.979 -19.944 31.399 1.00 50.00 H ATOM 325 OG1 THR 33 -43.261 -20.534 30.888 1.00 50.00 O ATOM 326 CG2 THR 33 -45.186 -21.699 30.052 1.00 50.00 C ATOM 327 N LYS 34 -45.689 -17.918 28.579 1.00 50.00 N ATOM 328 CA LYS 34 -45.484 -17.464 27.211 1.00 50.00 C ATOM 329 C LYS 34 -45.848 -18.573 26.272 1.00 50.00 C ATOM 330 O LYS 34 -45.148 -18.825 25.293 1.00 50.00 O ATOM 331 H LYS 34 -46.290 -17.504 29.104 1.00 50.00 H ATOM 332 CB LYS 34 -44.035 -17.018 27.007 1.00 50.00 C ATOM 333 CD LYS 34 -42.179 -15.440 27.609 1.00 50.00 C ATOM 334 CE LYS 34 -41.177 -16.474 28.097 1.00 50.00 C ATOM 335 CG LYS 34 -43.606 -15.869 27.905 1.00 50.00 C ATOM 336 HZ1 LYS 34 -39.215 -16.653 28.191 1.00 50.00 H ATOM 337 HZ2 LYS 34 -39.634 -15.270 28.346 1.00 50.00 H ATOM 338 HZ3 LYS 34 -39.627 -15.884 27.029 1.00 50.00 H ATOM 339 NZ LYS 34 -39.772 -16.025 27.895 1.00 50.00 N ATOM 340 N LYS 35 -46.964 -19.278 26.542 1.00 50.00 N ATOM 341 CA LYS 35 -47.462 -20.365 25.711 1.00 50.00 C ATOM 342 C LYS 35 -48.711 -19.915 25.019 1.00 50.00 C ATOM 343 O LYS 35 -49.266 -20.633 24.191 1.00 50.00 O ATOM 344 H LYS 35 -47.408 -19.040 27.287 1.00 50.00 H ATOM 345 CB LYS 35 -47.716 -21.613 26.559 1.00 50.00 C ATOM 346 CD LYS 35 -46.783 -23.462 27.978 1.00 50.00 C ATOM 347 CE LYS 35 -45.527 -24.071 28.578 1.00 50.00 C ATOM 348 CG LYS 35 -46.462 -22.209 27.177 1.00 50.00 C ATOM 349 HZ1 LYS 35 -45.073 -25.614 29.720 1.00 50.00 H ATOM 350 HZ2 LYS 35 -46.215 -25.897 28.868 1.00 50.00 H ATOM 351 HZ3 LYS 35 -46.379 -25.070 30.051 1.00 50.00 H ATOM 352 NZ LYS 35 -45.829 -25.285 29.386 1.00 50.00 N ATOM 353 N TYR 36 -49.198 -18.700 25.339 1.00 50.00 N ATOM 354 CA TYR 36 -50.379 -18.109 24.729 1.00 50.00 C ATOM 355 C TYR 36 -50.230 -16.619 24.724 1.00 50.00 C ATOM 356 O TYR 36 -49.442 -16.062 25.485 1.00 50.00 O ATOM 357 H TYR 36 -48.746 -18.250 25.973 1.00 50.00 H ATOM 358 CB TYR 36 -51.642 -18.536 25.479 1.00 50.00 C ATOM 359 CG TYR 36 -51.866 -20.031 25.499 1.00 50.00 C ATOM 360 HH TYR 36 -51.937 -24.493 26.101 1.00 50.00 H ATOM 361 OH TYR 36 -52.469 -24.145 25.566 1.00 50.00 O ATOM 362 CZ TYR 36 -52.270 -22.784 25.543 1.00 50.00 C ATOM 363 CD1 TYR 36 -51.102 -20.855 26.317 1.00 50.00 C ATOM 364 CE1 TYR 36 -51.299 -22.221 26.342 1.00 50.00 C ATOM 365 CD2 TYR 36 -52.840 -20.616 24.701 1.00 50.00 C ATOM 366 CE2 TYR 36 -53.052 -21.982 24.713 1.00 50.00 C ATOM 367 N TRP 37 -50.988 -15.918 23.858 1.00 50.00 N ATOM 368 CA TRP 37 -50.963 -14.469 23.741 1.00 50.00 C ATOM 369 C TRP 37 -52.359 -13.945 23.885 1.00 50.00 C ATOM 370 O TRP 37 -53.326 -14.700 23.808 1.00 50.00 O ATOM 371 H TRP 37 -51.535 -16.404 23.331 1.00 50.00 H ATOM 372 CB TRP 37 -50.350 -14.049 22.403 1.00 50.00 C ATOM 373 HB2 TRP 37 -51.059 -14.034 21.649 1.00 50.00 H ATOM 374 HB3 TRP 37 -49.386 -14.282 22.275 1.00 50.00 H ATOM 375 CG TRP 37 -50.144 -12.571 22.275 1.00 50.00 C ATOM 376 CD1 TRP 37 -49.930 -11.683 23.289 1.00 50.00 C ATOM 377 HE1 TRP 37 -49.630 -9.644 23.296 1.00 50.00 H ATOM 378 NE1 TRP 37 -49.786 -10.413 22.784 1.00 50.00 N ATOM 379 CD2 TRP 37 -50.133 -11.808 21.062 1.00 50.00 C ATOM 380 CE2 TRP 37 -49.907 -10.466 21.417 1.00 50.00 C ATOM 381 CH2 TRP 37 -49.995 -9.787 19.158 1.00 50.00 C ATOM 382 CZ2 TRP 37 -49.835 -9.444 20.471 1.00 50.00 C ATOM 383 CE3 TRP 37 -50.292 -12.129 19.711 1.00 50.00 C ATOM 384 CZ3 TRP 37 -50.220 -11.114 18.777 1.00 50.00 C ATOM 385 N VAL 38 -52.511 -12.624 24.102 1.00 50.00 N ATOM 386 CA VAL 38 -53.799 -11.970 24.279 1.00 50.00 C ATOM 387 C VAL 38 -53.907 -10.838 23.305 1.00 50.00 C ATOM 388 O VAL 38 -53.154 -9.870 23.379 1.00 50.00 O ATOM 389 H VAL 38 -51.753 -12.140 24.135 1.00 50.00 H ATOM 390 CB VAL 38 -53.985 -11.472 25.724 1.00 50.00 C ATOM 391 CG1 VAL 38 -55.330 -10.778 25.879 1.00 50.00 C ATOM 392 CG2 VAL 38 -53.862 -12.628 26.706 1.00 50.00 C ATOM 393 N TYR 39 -54.855 -10.923 22.351 1.00 50.00 N ATOM 394 CA TYR 39 -55.095 -9.898 21.345 1.00 50.00 C ATOM 395 C TYR 39 -56.283 -9.086 21.755 1.00 50.00 C ATOM 396 O TYR 39 -57.392 -9.603 21.866 1.00 50.00 O ATOM 397 H TYR 39 -55.356 -11.671 22.361 1.00 50.00 H ATOM 398 CB TYR 39 -55.307 -10.536 19.970 1.00 50.00 C ATOM 399 CG TYR 39 -55.538 -9.536 18.860 1.00 50.00 C ATOM 400 HH TYR 39 -55.436 -6.415 15.618 1.00 50.00 H ATOM 401 OH TYR 39 -56.157 -6.783 15.807 1.00 50.00 O ATOM 402 CZ TYR 39 -55.954 -7.694 16.817 1.00 50.00 C ATOM 403 CD1 TYR 39 -54.489 -8.780 18.355 1.00 50.00 C ATOM 404 CE1 TYR 39 -54.689 -7.864 17.340 1.00 50.00 C ATOM 405 CD2 TYR 39 -56.805 -9.352 18.321 1.00 50.00 C ATOM 406 CE2 TYR 39 -57.025 -8.441 17.306 1.00 50.00 C ATOM 407 N GLN 40 -56.089 -7.774 21.995 1.00 50.00 N ATOM 408 CA GLN 40 -57.135 -6.862 22.433 1.00 50.00 C ATOM 409 C GLN 40 -57.782 -7.419 23.663 1.00 50.00 C ATOM 410 O GLN 40 -58.976 -7.231 23.886 1.00 50.00 O ATOM 411 H GLN 40 -55.251 -7.470 21.869 1.00 50.00 H ATOM 412 CB GLN 40 -58.159 -6.645 21.317 1.00 50.00 C ATOM 413 CD GLN 40 -58.633 -5.767 18.997 1.00 50.00 C ATOM 414 CG GLN 40 -57.580 -6.025 20.056 1.00 50.00 C ATOM 415 OE1 GLN 40 -59.728 -5.289 19.299 1.00 50.00 O ATOM 416 HE21 GLN 40 -58.897 -5.952 17.082 1.00 50.00 H ATOM 417 HE22 GLN 40 -57.497 -6.432 17.571 1.00 50.00 H ATOM 418 NE2 GLN 40 -58.307 -6.085 17.750 1.00 50.00 N ATOM 419 N GLY 41 -57.011 -8.130 24.507 1.00 50.00 N ATOM 420 CA GLY 41 -57.490 -8.725 25.746 1.00 50.00 C ATOM 421 C GLY 41 -58.127 -10.044 25.438 1.00 50.00 C ATOM 422 O GLY 41 -58.696 -10.689 26.314 1.00 50.00 O ATOM 423 H GLY 41 -56.149 -8.228 24.265 1.00 50.00 H ATOM 424 N LYS 42 -58.052 -10.492 24.169 1.00 50.00 N ATOM 425 CA LYS 42 -58.627 -11.749 23.712 1.00 50.00 C ATOM 426 C LYS 42 -57.578 -12.815 23.778 1.00 50.00 C ATOM 427 O LYS 42 -56.570 -12.751 23.078 1.00 50.00 O ATOM 428 H LYS 42 -57.613 -9.961 23.589 1.00 50.00 H ATOM 429 CB LYS 42 -59.180 -11.601 22.294 1.00 50.00 C ATOM 430 CD LYS 42 -60.446 -12.611 20.376 1.00 50.00 C ATOM 431 CE LYS 42 -61.127 -13.859 19.841 1.00 50.00 C ATOM 432 CG LYS 42 -59.889 -12.840 21.772 1.00 50.00 C ATOM 433 HZ1 LYS 42 -62.067 -14.399 18.191 1.00 50.00 H ATOM 434 HZ2 LYS 42 -61.014 -13.435 17.918 1.00 50.00 H ATOM 435 HZ3 LYS 42 -62.275 -12.993 18.491 1.00 50.00 H ATOM 436 NZ LYS 42 -61.676 -13.651 18.473 1.00 50.00 N ATOM 437 N PRO 43 -57.782 -13.839 24.629 1.00 50.00 N ATOM 438 CA PRO 43 -56.868 -14.960 24.789 1.00 50.00 C ATOM 439 C PRO 43 -57.170 -15.987 23.744 1.00 50.00 C ATOM 440 O PRO 43 -58.304 -16.443 23.617 1.00 50.00 O ATOM 441 CB PRO 43 -57.150 -15.467 26.205 1.00 50.00 C ATOM 442 CD PRO 43 -58.809 -13.815 25.710 1.00 50.00 C ATOM 443 CG PRO 43 -58.573 -15.096 26.459 1.00 50.00 C ATOM 444 N VAL 44 -56.156 -16.389 22.951 1.00 50.00 N ATOM 445 CA VAL 44 -56.285 -17.395 21.908 1.00 50.00 C ATOM 446 C VAL 44 -56.201 -18.754 22.532 1.00 50.00 C ATOM 447 O VAL 44 -55.593 -18.927 23.585 1.00 50.00 O ATOM 448 H VAL 44 -55.361 -15.993 23.099 1.00 50.00 H ATOM 449 CB VAL 44 -55.210 -17.221 20.819 1.00 50.00 C ATOM 450 CG1 VAL 44 -55.339 -15.859 20.158 1.00 50.00 C ATOM 451 CG2 VAL 44 -53.820 -17.403 21.409 1.00 50.00 C ATOM 452 N MET 45 -56.814 -19.772 21.896 1.00 50.00 N ATOM 453 CA MET 45 -56.690 -21.169 22.284 1.00 50.00 C ATOM 454 C MET 45 -56.469 -21.997 21.057 1.00 50.00 C ATOM 455 O MET 45 -56.056 -23.151 21.140 1.00 50.00 O ATOM 456 H MET 45 -57.325 -19.544 21.192 1.00 50.00 H ATOM 457 CB MET 45 -57.937 -21.627 23.043 1.00 50.00 C ATOM 458 SD MET 45 -56.781 -21.220 25.529 1.00 50.00 S ATOM 459 CE MET 45 -56.982 -22.970 25.858 1.00 50.00 C ATOM 460 CG MET 45 -58.140 -20.931 24.380 1.00 50.00 C ATOM 461 N PRO 46 -56.739 -21.430 19.864 1.00 50.00 N ATOM 462 CA PRO 46 -56.713 -22.144 18.597 1.00 50.00 C ATOM 463 C PRO 46 -55.340 -22.699 18.380 1.00 50.00 C ATOM 464 O PRO 46 -54.354 -22.151 18.869 1.00 50.00 O ATOM 465 CB PRO 46 -57.082 -21.077 17.564 1.00 50.00 C ATOM 466 CD PRO 46 -57.192 -20.005 19.700 1.00 50.00 C ATOM 467 CG PRO 46 -57.831 -20.048 18.341 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. Number of atoms possible to evaluate: 0 ERROR! The set of atoms possible to evaluate is empty-> END of the results output