####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS002_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS002_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 17 - 31 4.95 9.39 LCS_AVERAGE: 39.76 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 40 - 46 1.70 9.45 LCS_AVERAGE: 15.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 41 - 46 0.70 10.29 LCS_AVERAGE: 11.27 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 3 5 14 0 3 4 4 4 5 5 10 12 15 18 19 20 23 25 25 26 26 27 27 LCS_GDT F 13 F 13 3 6 14 0 3 4 5 5 7 8 8 12 12 13 19 20 21 21 22 26 26 27 27 LCS_GDT H 14 H 14 4 6 14 3 4 4 5 5 7 8 10 12 15 18 19 20 23 25 25 26 26 27 28 LCS_GDT Y 15 Y 15 4 6 14 3 4 4 5 5 7 8 8 12 12 18 19 20 23 25 25 26 27 28 30 LCS_GDT T 16 T 16 4 6 14 3 4 4 5 5 7 9 10 12 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT V 17 V 17 4 6 15 3 4 5 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT T 18 T 18 4 6 15 3 4 5 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT D 19 D 19 4 5 15 3 4 4 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT I 20 I 20 4 5 15 3 4 4 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT K 21 K 21 4 5 15 3 4 4 4 5 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT D 22 D 22 4 5 15 3 4 4 4 6 8 10 12 13 14 16 18 20 22 25 25 26 28 29 30 LCS_GDT L 23 L 23 4 5 15 3 4 4 4 5 5 8 10 10 13 16 17 20 23 25 25 26 28 29 30 LCS_GDT T 24 T 24 4 5 15 3 4 4 4 6 10 11 12 13 14 16 18 20 23 25 25 26 28 29 30 LCS_GDT K 25 K 25 3 5 15 3 3 4 4 5 5 7 10 12 14 16 18 20 21 22 24 26 28 29 30 LCS_GDT L 26 L 26 3 5 15 3 3 5 7 7 7 8 10 11 13 16 18 20 21 22 24 26 28 29 30 LCS_GDT G 27 G 27 4 5 15 3 3 5 7 7 7 8 10 11 13 16 18 20 21 22 24 26 28 29 30 LCS_GDT A 28 A 28 4 5 15 3 3 4 7 7 7 8 10 10 13 16 18 19 21 22 24 26 28 29 30 LCS_GDT I 29 I 29 4 5 15 3 3 5 7 7 7 8 10 10 13 16 18 20 21 22 24 26 28 29 30 LCS_GDT Y 30 Y 30 4 5 15 3 3 4 7 7 7 7 10 10 12 15 15 17 19 22 24 26 27 29 30 LCS_GDT D 31 D 31 3 5 15 3 3 3 4 5 5 7 10 13 14 16 18 20 21 22 24 26 28 29 30 LCS_GDT K 32 K 32 3 4 11 3 3 3 4 5 6 8 11 13 14 16 18 20 21 22 24 26 28 29 30 LCS_GDT T 33 T 33 3 4 12 3 3 4 4 5 6 7 7 8 9 15 17 18 20 22 24 26 28 29 30 LCS_GDT K 34 K 34 3 4 13 3 3 4 4 5 6 7 7 11 13 16 17 19 23 25 25 26 28 29 30 LCS_GDT K 35 K 35 3 5 13 0 3 4 4 5 6 7 8 8 13 14 15 17 23 25 25 26 28 29 30 LCS_GDT Y 36 Y 36 3 5 13 3 3 4 4 5 6 7 10 10 13 18 19 20 23 25 25 26 28 29 30 LCS_GDT W 37 W 37 3 5 13 3 3 3 4 5 6 7 8 11 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT V 38 V 38 3 5 13 3 3 3 4 4 5 7 8 9 12 13 14 20 23 25 25 26 28 29 30 LCS_GDT Y 39 Y 39 3 5 13 0 3 3 4 5 6 7 9 12 13 18 19 20 23 25 25 26 28 29 30 LCS_GDT Q 40 Q 40 3 7 13 3 3 5 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT G 41 G 41 6 7 13 4 6 6 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT K 42 K 42 6 7 13 4 6 6 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT P 43 P 43 6 7 13 4 6 6 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT V 44 V 44 6 7 13 4 6 6 7 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 LCS_GDT M 45 M 45 6 7 13 3 6 6 7 7 10 11 12 12 15 18 19 20 23 25 25 26 27 28 30 LCS_GDT P 46 P 46 6 7 13 3 6 6 7 7 7 8 9 11 12 15 15 20 22 25 25 26 27 28 29 LCS_AVERAGE LCS_A: 22.23 ( 11.27 15.67 39.76 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 9 10 11 12 13 15 18 19 20 23 25 25 26 28 29 30 GDT PERCENT_AT 11.43 17.14 17.14 22.86 25.71 28.57 31.43 34.29 37.14 42.86 51.43 54.29 57.14 65.71 71.43 71.43 74.29 80.00 82.86 85.71 GDT RMS_LOCAL 0.26 0.70 0.70 1.56 1.67 1.86 2.07 2.32 3.04 3.63 4.01 4.13 4.27 5.11 5.30 5.30 5.65 6.36 6.50 6.71 GDT RMS_ALL_AT 9.86 10.29 10.29 8.56 8.59 8.72 8.57 8.36 8.44 9.85 10.07 10.16 10.33 9.39 9.20 9.20 8.50 8.51 8.49 8.28 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: Y 15 Y 15 # possible swapping detected: D 22 D 22 # possible swapping detected: Y 30 Y 30 # possible swapping detected: Y 36 Y 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 11.553 0 0.606 1.374 14.196 0.000 0.810 LGA F 13 F 13 12.924 0 0.630 1.335 21.419 0.000 0.000 LGA H 14 H 14 12.131 0 0.408 1.160 14.797 0.000 0.000 LGA Y 15 Y 15 9.527 0 0.095 1.309 17.762 6.310 2.222 LGA T 16 T 16 6.970 0 0.080 0.145 11.562 21.667 12.993 LGA V 17 V 17 0.759 0 0.582 1.476 5.292 82.143 62.313 LGA T 18 T 18 1.614 0 0.603 0.541 3.465 69.286 66.259 LGA D 19 D 19 2.861 0 0.397 0.383 5.701 62.857 45.298 LGA I 20 I 20 2.156 0 0.609 0.727 5.815 70.952 58.750 LGA K 21 K 21 2.808 0 0.603 0.868 9.215 53.690 30.159 LGA D 22 D 22 6.438 0 0.643 1.273 10.685 23.214 12.202 LGA L 23 L 23 7.308 0 0.238 0.403 12.443 16.905 9.048 LGA T 24 T 24 3.665 0 0.648 0.968 6.064 31.310 29.388 LGA K 25 K 25 10.486 0 0.656 0.727 22.200 1.190 0.529 LGA L 26 L 26 11.312 0 0.645 1.244 13.724 0.000 0.000 LGA G 27 G 27 12.767 0 0.679 0.679 12.767 0.000 0.000 LGA A 28 A 28 12.268 0 0.044 0.055 12.992 0.000 0.000 LGA I 29 I 29 11.950 0 0.168 1.208 12.848 0.000 0.000 LGA Y 30 Y 30 13.115 0 0.035 1.309 15.501 0.000 0.000 LGA D 31 D 31 10.695 0 0.321 0.756 12.660 0.119 0.060 LGA K 32 K 32 10.683 0 0.591 0.913 20.797 2.500 1.111 LGA T 33 T 33 9.127 0 0.667 0.631 12.176 1.429 0.816 LGA K 34 K 34 7.286 0 0.695 0.897 7.626 9.286 23.069 LGA K 35 K 35 9.986 0 0.694 0.717 18.162 0.476 0.212 LGA Y 36 Y 36 10.223 0 0.139 1.343 11.268 0.595 1.151 LGA W 37 W 37 9.159 0 0.100 0.219 10.426 0.595 7.653 LGA V 38 V 38 10.331 0 0.592 0.529 13.831 1.190 0.680 LGA Y 39 Y 39 6.792 0 0.571 0.971 7.873 15.000 18.571 LGA Q 40 Q 40 1.832 0 0.623 1.075 4.938 56.548 50.635 LGA G 41 G 41 2.629 0 0.578 0.578 2.629 65.119 65.119 LGA K 42 K 42 1.848 0 0.043 0.750 8.309 75.119 48.624 LGA P 43 P 43 0.827 0 0.040 0.070 1.750 88.214 82.857 LGA V 44 V 44 1.782 0 0.055 0.066 2.597 72.976 68.367 LGA M 45 M 45 3.102 0 0.186 1.281 5.972 46.905 41.726 LGA P 46 P 46 5.464 0 0.054 0.113 5.962 26.310 25.646 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 7.749 7.712 9.035 25.769 21.893 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 12 2.32 36.429 31.149 0.496 LGA_LOCAL RMSD: 2.318 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.364 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 7.749 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.343008 * X + -0.205879 * Y + 0.916493 * Z + 48.130352 Y_new = -0.663983 * X + 0.637006 * Y + 0.391599 * Z + -62.467316 Z_new = -0.664434 * X + -0.742857 * Y + 0.081797 * Z + 4.726312 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.093964 0.726736 -1.461126 [DEG: -62.6795 41.6389 -83.7164 ] ZXZ: 1.974596 1.488907 -2.411864 [DEG: 113.1360 85.3081 -138.1896 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS002_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS002_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 12 2.32 31.149 7.75 REMARK ---------------------------------------------------------- MOLECULE T0548TS002_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT 3L2QA ATOM 106 N HIS 12 -46.512 -19.621 35.411 1.00 50.00 N ATOM 107 CA HIS 12 -47.889 -19.922 35.124 1.00 50.00 C ATOM 108 C HIS 12 -48.716 -19.040 36.002 1.00 50.00 C ATOM 109 O HIS 12 -49.800 -18.602 35.619 1.00 50.00 O ATOM 110 H HIS 12 -45.968 -20.263 35.728 1.00 50.00 H ATOM 111 CB HIS 12 -48.174 -21.407 35.358 1.00 50.00 C ATOM 112 CG HIS 12 -47.533 -22.310 34.350 1.00 50.00 C ATOM 113 ND1 HIS 12 -48.150 -22.665 33.170 1.00 50.00 N ATOM 114 CE1 HIS 12 -47.334 -23.479 32.477 1.00 50.00 C ATOM 115 CD2 HIS 12 -46.266 -23.020 34.249 1.00 50.00 C ATOM 116 HE2 HIS 12 -45.495 -24.227 32.828 1.00 50.00 H ATOM 117 NE2 HIS 12 -46.202 -23.697 33.118 1.00 50.00 N ATOM 118 N PHE 13 -48.184 -18.754 37.203 1.00 50.00 N ATOM 119 CA PHE 13 -48.783 -17.946 38.226 1.00 50.00 C ATOM 120 C PHE 13 -48.973 -16.580 37.659 1.00 50.00 C ATOM 121 O PHE 13 -49.867 -15.842 38.071 1.00 50.00 O ATOM 122 H PHE 13 -47.375 -19.124 37.339 1.00 50.00 H ATOM 123 CB PHE 13 -47.907 -17.931 39.480 1.00 50.00 C ATOM 124 CG PHE 13 -48.490 -17.142 40.617 1.00 50.00 C ATOM 125 CZ PHE 13 -49.565 -15.677 42.721 1.00 50.00 C ATOM 126 CD1 PHE 13 -49.497 -17.675 41.403 1.00 50.00 C ATOM 127 CE1 PHE 13 -50.034 -16.949 42.451 1.00 50.00 C ATOM 128 CD2 PHE 13 -48.031 -15.869 40.902 1.00 50.00 C ATOM 129 CE2 PHE 13 -48.568 -15.142 41.948 1.00 50.00 C ATOM 130 N HIS 14 -48.141 -16.228 36.665 1.00 50.00 N ATOM 131 CA HIS 14 -48.140 -14.928 36.068 1.00 50.00 C ATOM 132 C HIS 14 -47.521 -13.936 36.998 1.00 50.00 C ATOM 133 O HIS 14 -47.942 -12.783 37.080 1.00 50.00 O ATOM 134 H HIS 14 -47.564 -16.856 36.376 1.00 50.00 H ATOM 135 CB HIS 14 -49.564 -14.507 35.700 1.00 50.00 C ATOM 136 CG HIS 14 -50.235 -15.427 34.730 1.00 50.00 C ATOM 137 ND1 HIS 14 -49.845 -15.533 33.412 1.00 50.00 N ATOM 138 CE1 HIS 14 -50.629 -16.434 32.794 1.00 50.00 C ATOM 139 CD2 HIS 14 -51.338 -16.375 34.791 1.00 50.00 C ATOM 140 HE2 HIS 14 -52.171 -17.580 33.404 1.00 50.00 H ATOM 141 NE2 HIS 14 -51.528 -16.943 33.615 1.00 50.00 N ATOM 142 N TYR 15 -46.475 -14.391 37.718 1.00 50.00 N ATOM 143 CA TYR 15 -45.635 -13.519 38.485 1.00 50.00 C ATOM 144 C TYR 15 -44.431 -13.336 37.620 1.00 50.00 C ATOM 145 O TYR 15 -43.931 -14.300 37.043 1.00 50.00 O ATOM 146 H TYR 15 -46.313 -15.276 37.706 1.00 50.00 H ATOM 147 CB TYR 15 -45.329 -14.134 39.851 1.00 50.00 C ATOM 148 CG TYR 15 -44.434 -13.281 40.721 1.00 50.00 C ATOM 149 HH TYR 15 -42.424 -10.295 43.423 1.00 50.00 H ATOM 150 OH TYR 15 -41.982 -10.926 43.115 1.00 50.00 O ATOM 151 CZ TYR 15 -42.792 -11.707 42.323 1.00 50.00 C ATOM 152 CD1 TYR 15 -44.929 -12.153 41.361 1.00 50.00 C ATOM 153 CE1 TYR 15 -44.118 -11.367 42.158 1.00 50.00 C ATOM 154 CD2 TYR 15 -43.096 -13.608 40.899 1.00 50.00 C ATOM 155 CE2 TYR 15 -42.269 -12.835 41.692 1.00 50.00 C ATOM 156 N THR 16 -43.948 -12.085 37.485 1.00 50.00 N ATOM 157 CA THR 16 -42.860 -11.845 36.580 1.00 50.00 C ATOM 158 C THR 16 -41.596 -12.415 37.127 1.00 50.00 C ATOM 159 O THR 16 -41.399 -12.498 38.338 1.00 50.00 O ATOM 160 H THR 16 -44.301 -11.404 37.955 1.00 50.00 H ATOM 161 CB THR 16 -42.678 -10.342 36.303 1.00 50.00 C ATOM 162 HG1 THR 16 -41.721 -9.958 37.874 1.00 50.00 H ATOM 163 OG1 THR 16 -42.412 -9.654 37.532 1.00 50.00 O ATOM 164 CG2 THR 16 -43.937 -9.757 35.682 1.00 50.00 C ATOM 165 N VAL 17 -40.703 -12.849 36.213 1.00 50.00 N ATOM 166 CA VAL 17 -39.441 -13.383 36.624 1.00 50.00 C ATOM 167 C VAL 17 -38.398 -12.833 35.709 1.00 50.00 C ATOM 168 O VAL 17 -38.688 -12.333 34.621 1.00 50.00 O ATOM 169 H VAL 17 -40.907 -12.800 35.338 1.00 50.00 H ATOM 170 CB VAL 17 -39.450 -14.923 36.617 1.00 50.00 C ATOM 171 CG1 VAL 17 -40.485 -15.454 37.597 1.00 50.00 C ATOM 172 CG2 VAL 17 -39.720 -15.447 35.215 1.00 50.00 C ATOM 173 N THR 18 -37.131 -12.907 36.145 1.00 50.00 N ATOM 174 CA THR 18 -36.083 -12.382 35.333 1.00 50.00 C ATOM 175 C THR 18 -36.121 -13.117 34.035 1.00 50.00 C ATOM 176 O THR 18 -36.334 -14.326 33.999 1.00 50.00 O ATOM 177 H THR 18 -36.939 -13.283 36.940 1.00 50.00 H ATOM 178 CB THR 18 -34.712 -12.521 36.022 1.00 50.00 C ATOM 179 HG1 THR 18 -35.312 -12.113 37.755 1.00 50.00 H ATOM 180 OG1 THR 18 -34.722 -11.802 37.261 1.00 50.00 O ATOM 181 CG2 THR 18 -33.612 -11.951 35.139 1.00 50.00 C ATOM 182 N ASP 19 -35.908 -12.361 32.942 1.00 50.00 N ATOM 183 CA ASP 19 -35.892 -12.778 31.567 1.00 50.00 C ATOM 184 C ASP 19 -37.209 -13.334 31.120 1.00 50.00 C ATOM 185 O ASP 19 -37.261 -14.196 30.244 1.00 50.00 O ATOM 186 H ASP 19 -35.763 -11.498 33.152 1.00 50.00 H ATOM 187 CB ASP 19 -34.797 -13.823 31.337 1.00 50.00 C ATOM 188 CG ASP 19 -33.405 -13.265 31.554 1.00 50.00 C ATOM 189 OD1 ASP 19 -33.214 -12.047 31.351 1.00 50.00 O ATOM 190 OD2 ASP 19 -32.504 -14.045 31.929 1.00 50.00 O ATOM 191 N ILE 20 -38.329 -12.867 31.700 1.00 50.00 N ATOM 192 CA ILE 20 -39.562 -13.321 31.125 1.00 50.00 C ATOM 193 C ILE 20 -40.361 -12.106 30.775 1.00 50.00 C ATOM 194 O ILE 20 -40.777 -11.332 31.637 1.00 50.00 O ATOM 195 H ILE 20 -38.340 -12.306 32.404 1.00 50.00 H ATOM 196 CB ILE 20 -40.322 -14.254 32.085 1.00 50.00 C ATOM 197 CD1 ILE 20 -39.100 -16.354 31.314 1.00 50.00 C ATOM 198 CG1 ILE 20 -39.448 -15.447 32.474 1.00 50.00 C ATOM 199 CG2 ILE 20 -41.640 -14.695 31.466 1.00 50.00 C ATOM 200 N LYS 21 -40.606 -11.912 29.470 1.00 50.00 N ATOM 201 CA LYS 21 -41.323 -10.749 29.045 1.00 50.00 C ATOM 202 C LYS 21 -42.745 -10.888 29.460 1.00 50.00 C ATOM 203 O LYS 21 -43.374 -11.927 29.263 1.00 50.00 O ATOM 204 H LYS 21 -40.321 -12.512 28.863 1.00 50.00 H ATOM 205 CB LYS 21 -41.198 -10.568 27.531 1.00 50.00 C ATOM 206 CD LYS 21 -41.621 -9.144 25.507 1.00 50.00 C ATOM 207 CE LYS 21 -42.267 -7.873 24.980 1.00 50.00 C ATOM 208 CG LYS 21 -41.846 -9.299 27.003 1.00 50.00 C ATOM 209 HZ1 LYS 21 -42.460 -6.966 23.238 1.00 50.00 H ATOM 210 HZ2 LYS 21 -42.434 -8.412 23.089 1.00 50.00 H ATOM 211 HZ3 LYS 21 -41.199 -7.684 23.331 1.00 50.00 H ATOM 212 NZ LYS 21 -42.070 -7.718 23.512 1.00 50.00 N ATOM 213 N ASP 22 -43.282 -9.811 30.059 1.00 50.00 N ATOM 214 CA ASP 22 -44.644 -9.777 30.488 1.00 50.00 C ATOM 215 C ASP 22 -45.443 -9.440 29.271 1.00 50.00 C ATOM 216 O ASP 22 -44.886 -9.221 28.196 1.00 50.00 O ATOM 217 H ASP 22 -42.751 -9.094 30.186 1.00 50.00 H ATOM 218 CB ASP 22 -44.824 -8.762 31.620 1.00 50.00 C ATOM 219 CG ASP 22 -44.653 -7.330 31.151 1.00 50.00 C ATOM 220 OD1 ASP 22 -44.734 -7.092 29.928 1.00 50.00 O ATOM 221 OD2 ASP 22 -44.438 -6.447 32.007 1.00 50.00 O ATOM 222 N LEU 23 -46.777 -9.385 29.426 1.00 50.00 N ATOM 223 CA LEU 23 -47.671 -9.064 28.353 1.00 50.00 C ATOM 224 C LEU 23 -47.820 -10.237 27.439 1.00 50.00 C ATOM 225 O LEU 23 -48.569 -10.169 26.467 1.00 50.00 O ATOM 226 H LEU 23 -47.104 -9.561 30.246 1.00 50.00 H ATOM 227 CB LEU 23 -47.166 -7.842 27.583 1.00 50.00 C ATOM 228 CG LEU 23 -46.958 -6.565 28.398 1.00 50.00 C ATOM 229 CD1 LEU 23 -46.400 -5.452 27.523 1.00 50.00 C ATOM 230 CD2 LEU 23 -48.260 -6.124 29.050 1.00 50.00 C ATOM 231 N THR 24 -47.133 -11.357 27.727 1.00 50.00 N ATOM 232 CA THR 24 -47.347 -12.528 26.927 1.00 50.00 C ATOM 233 C THR 24 -47.928 -13.524 27.872 1.00 50.00 C ATOM 234 O THR 24 -47.407 -13.712 28.969 1.00 50.00 O ATOM 235 H THR 24 -46.547 -11.380 28.409 1.00 50.00 H ATOM 236 CB THR 24 -46.039 -13.011 26.273 1.00 50.00 C ATOM 237 HG1 THR 24 -45.364 -11.302 25.876 1.00 50.00 H ATOM 238 OG1 THR 24 -45.516 -11.982 25.424 1.00 50.00 O ATOM 239 CG2 THR 24 -46.291 -14.254 25.432 1.00 50.00 C ATOM 240 N LYS 25 -49.042 -14.172 27.490 1.00 50.00 N ATOM 241 CA LYS 25 -49.652 -15.104 28.391 1.00 50.00 C ATOM 242 C LYS 25 -48.920 -16.399 28.284 1.00 50.00 C ATOM 243 O LYS 25 -48.655 -16.883 27.185 1.00 50.00 O ATOM 244 H LYS 25 -49.404 -14.026 26.679 1.00 50.00 H ATOM 245 CB LYS 25 -51.139 -15.267 28.067 1.00 50.00 C ATOM 246 CD LYS 25 -53.374 -16.212 28.706 1.00 50.00 C ATOM 247 CE LYS 25 -54.127 -17.111 29.673 1.00 50.00 C ATOM 248 CG LYS 25 -51.893 -16.153 29.044 1.00 50.00 C ATOM 249 HZ1 LYS 25 -55.987 -17.714 29.937 1.00 50.00 H ATOM 250 HZ2 LYS 25 -55.687 -17.503 28.531 1.00 50.00 H ATOM 251 HZ3 LYS 25 -55.933 -16.365 29.399 1.00 50.00 H ATOM 252 NZ LYS 25 -55.579 -17.180 29.353 1.00 50.00 N ATOM 253 N LEU 26 -48.558 -16.997 29.439 1.00 50.00 N ATOM 254 CA LEU 26 -47.921 -18.279 29.390 1.00 50.00 C ATOM 255 C LEU 26 -48.888 -19.263 29.956 1.00 50.00 C ATOM 256 O LEU 26 -49.368 -19.108 31.079 1.00 50.00 O ATOM 257 H LEU 26 -48.712 -16.601 30.232 1.00 50.00 H ATOM 258 CB LEU 26 -46.601 -18.251 30.162 1.00 50.00 C ATOM 259 CG LEU 26 -45.698 -19.477 30.009 1.00 50.00 C ATOM 260 CD1 LEU 26 -44.284 -19.165 30.472 1.00 50.00 C ATOM 261 CD2 LEU 26 -46.260 -20.659 30.784 1.00 50.00 C ATOM 262 N GLY 27 -49.192 -20.317 29.173 1.00 50.00 N ATOM 263 CA GLY 27 -50.192 -21.268 29.565 1.00 50.00 C ATOM 264 C GLY 27 -49.594 -22.635 29.556 1.00 50.00 C ATOM 265 O GLY 27 -48.389 -22.800 29.375 1.00 50.00 O ATOM 266 H GLY 27 -48.756 -20.418 28.392 1.00 50.00 H ATOM 267 N ALA 28 -50.442 -23.666 29.755 1.00 50.00 N ATOM 268 CA ALA 28 -49.903 -24.988 29.838 1.00 50.00 C ATOM 269 C ALA 28 -50.608 -25.920 28.902 1.00 50.00 C ATOM 270 O ALA 28 -51.795 -25.786 28.610 1.00 50.00 O ATOM 271 H ALA 28 -51.329 -23.535 29.836 1.00 50.00 H ATOM 272 CB ALA 28 -49.996 -25.510 31.263 1.00 50.00 C ATOM 273 N ILE 29 -49.827 -26.895 28.405 1.00 50.00 N ATOM 274 CA ILE 29 -50.230 -28.028 27.625 1.00 50.00 C ATOM 275 C ILE 29 -49.734 -29.089 28.528 1.00 50.00 C ATOM 276 O ILE 29 -48.943 -28.761 29.412 1.00 50.00 O ATOM 277 H ILE 29 -48.959 -26.779 28.613 1.00 50.00 H ATOM 278 CB ILE 29 -49.623 -27.984 26.210 1.00 50.00 C ATOM 279 CD1 ILE 29 -49.941 -28.925 23.862 1.00 50.00 C ATOM 280 CG1 ILE 29 -50.216 -29.094 25.341 1.00 50.00 C ATOM 281 CG2 ILE 29 -48.106 -28.068 26.279 1.00 50.00 C ATOM 282 N TYR 30 -50.172 -30.354 28.367 1.00 50.00 N ATOM 283 CA TYR 30 -49.793 -31.314 29.358 1.00 50.00 C ATOM 284 C TYR 30 -48.308 -31.402 29.449 1.00 50.00 C ATOM 285 O TYR 30 -47.617 -31.775 28.503 1.00 50.00 O ATOM 286 H TYR 30 -50.684 -30.604 27.670 1.00 50.00 H ATOM 287 CB TYR 30 -50.394 -32.683 29.033 1.00 50.00 C ATOM 288 CG TYR 30 -50.065 -33.753 30.051 1.00 50.00 C ATOM 289 HH TYR 30 -49.648 -36.580 33.528 1.00 50.00 H ATOM 290 OH TYR 30 -49.171 -36.687 32.858 1.00 50.00 O ATOM 291 CZ TYR 30 -49.465 -35.717 31.928 1.00 50.00 C ATOM 292 CD1 TYR 30 -50.726 -33.801 31.271 1.00 50.00 C ATOM 293 CE1 TYR 30 -50.432 -34.775 32.207 1.00 50.00 C ATOM 294 CD2 TYR 30 -49.093 -34.710 29.787 1.00 50.00 C ATOM 295 CE2 TYR 30 -48.786 -35.691 30.711 1.00 50.00 C ATOM 296 N ASP 31 -47.827 -31.020 30.649 1.00 50.00 N ATOM 297 CA ASP 31 -46.471 -30.979 31.107 1.00 50.00 C ATOM 298 C ASP 31 -45.592 -30.262 30.138 1.00 50.00 C ATOM 299 O ASP 31 -44.438 -30.637 29.943 1.00 50.00 O ATOM 300 H ASP 31 -48.495 -30.766 31.197 1.00 50.00 H ATOM 301 CB ASP 31 -45.943 -32.395 31.342 1.00 50.00 C ATOM 302 CG ASP 31 -46.670 -33.109 32.465 1.00 50.00 C ATOM 303 OD1 ASP 31 -47.160 -32.424 33.385 1.00 50.00 O ATOM 304 OD2 ASP 31 -46.748 -34.355 32.424 1.00 50.00 O ATOM 305 N LYS 32 -46.111 -29.176 29.531 1.00 50.00 N ATOM 306 CA LYS 32 -45.317 -28.420 28.609 1.00 50.00 C ATOM 307 C LYS 32 -45.699 -26.984 28.802 1.00 50.00 C ATOM 308 O LYS 32 -46.858 -26.617 28.616 1.00 50.00 O ATOM 309 H LYS 32 -46.958 -28.927 29.705 1.00 50.00 H ATOM 310 CB LYS 32 -45.552 -28.904 27.177 1.00 50.00 C ATOM 311 CD LYS 32 -45.312 -30.729 25.470 1.00 50.00 C ATOM 312 CE LYS 32 -44.895 -32.170 25.224 1.00 50.00 C ATOM 313 CG LYS 32 -45.116 -30.338 26.926 1.00 50.00 C ATOM 314 HZ1 LYS 32 -44.822 -33.411 23.692 1.00 50.00 H ATOM 315 HZ2 LYS 32 -44.579 -32.038 23.281 1.00 50.00 H ATOM 316 HZ3 LYS 32 -45.932 -32.481 23.574 1.00 50.00 H ATOM 317 NZ LYS 32 -45.075 -32.564 23.799 1.00 50.00 N ATOM 318 N THR 33 -44.736 -26.124 29.185 1.00 50.00 N ATOM 319 CA THR 33 -45.059 -24.738 29.343 1.00 50.00 C ATOM 320 C THR 33 -44.968 -24.111 27.990 1.00 50.00 C ATOM 321 O THR 33 -44.022 -24.361 27.246 1.00 50.00 O ATOM 322 H THR 33 -43.897 -26.412 29.341 1.00 50.00 H ATOM 323 CB THR 33 -44.119 -24.051 30.350 1.00 50.00 C ATOM 324 HG1 THR 33 -43.738 -24.306 32.173 1.00 50.00 H ATOM 325 OG1 THR 33 -44.247 -24.678 31.633 1.00 50.00 O ATOM 326 CG2 THR 33 -44.473 -22.578 30.491 1.00 50.00 C ATOM 327 N LYS 34 -45.963 -23.279 27.619 1.00 50.00 N ATOM 328 CA LYS 34 -45.885 -22.708 26.308 1.00 50.00 C ATOM 329 C LYS 34 -46.267 -21.266 26.349 1.00 50.00 C ATOM 330 O LYS 34 -46.903 -20.800 27.293 1.00 50.00 O ATOM 331 H LYS 34 -46.656 -23.077 28.158 1.00 50.00 H ATOM 332 CB LYS 34 -46.783 -23.474 25.335 1.00 50.00 C ATOM 333 CD LYS 34 -49.093 -24.208 24.683 1.00 50.00 C ATOM 334 CE LYS 34 -50.580 -24.057 24.958 1.00 50.00 C ATOM 335 CG LYS 34 -48.264 -23.403 25.670 1.00 50.00 C ATOM 336 HZ1 LYS 34 -52.267 -24.741 24.196 1.00 50.00 H ATOM 337 HZ2 LYS 34 -51.194 -25.714 24.080 1.00 50.00 H ATOM 338 HZ3 LYS 34 -51.247 -24.578 23.176 1.00 50.00 H ATOM 339 NZ LYS 34 -51.405 -24.852 24.007 1.00 50.00 N ATOM 340 N LYS 35 -45.853 -20.515 25.307 1.00 50.00 N ATOM 341 CA LYS 35 -46.111 -19.107 25.288 1.00 50.00 C ATOM 342 C LYS 35 -46.607 -18.713 23.935 1.00 50.00 C ATOM 343 O LYS 35 -46.296 -19.337 22.923 1.00 50.00 O ATOM 344 H LYS 35 -45.413 -20.901 24.622 1.00 50.00 H ATOM 345 CB LYS 35 -44.849 -18.326 25.659 1.00 50.00 C ATOM 346 CD LYS 35 -43.055 -17.842 27.346 1.00 50.00 C ATOM 347 CE LYS 35 -43.272 -16.338 27.397 1.00 50.00 C ATOM 348 CG LYS 35 -44.357 -18.579 27.075 1.00 50.00 C ATOM 349 HZ1 LYS 35 -42.185 -14.734 27.765 1.00 50.00 H ATOM 350 HZ2 LYS 35 -41.399 -15.778 27.130 1.00 50.00 H ATOM 351 HZ3 LYS 35 -41.732 -15.876 28.541 1.00 50.00 H ATOM 352 NZ LYS 35 -42.022 -15.608 27.743 1.00 50.00 N ATOM 353 N TYR 36 -47.399 -17.626 23.898 1.00 50.00 N ATOM 354 CA TYR 36 -47.881 -17.108 22.655 1.00 50.00 C ATOM 355 C TYR 36 -47.036 -15.928 22.328 1.00 50.00 C ATOM 356 O TYR 36 -46.937 -14.980 23.105 1.00 50.00 O ATOM 357 H TYR 36 -47.625 -17.223 24.671 1.00 50.00 H ATOM 358 CB TYR 36 -49.366 -16.752 22.763 1.00 50.00 C ATOM 359 CG TYR 36 -50.272 -17.950 22.940 1.00 50.00 C ATOM 360 HH TYR 36 -52.820 -21.422 24.249 1.00 50.00 H ATOM 361 OH TYR 36 -52.762 -21.241 23.441 1.00 50.00 O ATOM 362 CZ TYR 36 -51.938 -20.152 23.274 1.00 50.00 C ATOM 363 CD1 TYR 36 -50.539 -18.459 24.203 1.00 50.00 C ATOM 364 CE1 TYR 36 -51.366 -19.553 24.374 1.00 50.00 C ATOM 365 CD2 TYR 36 -50.857 -18.566 21.841 1.00 50.00 C ATOM 366 CE2 TYR 36 -51.686 -19.661 21.993 1.00 50.00 C ATOM 367 N TRP 37 -46.387 -15.970 21.151 1.00 50.00 N ATOM 368 CA TRP 37 -45.559 -14.861 20.796 1.00 50.00 C ATOM 369 C TRP 37 -45.984 -14.457 19.421 1.00 50.00 C ATOM 370 O TRP 37 -46.736 -15.168 18.757 1.00 50.00 O ATOM 371 H TRP 37 -46.464 -16.672 20.593 1.00 50.00 H ATOM 372 CB TRP 37 -44.082 -15.250 20.870 1.00 50.00 C ATOM 373 HB2 TRP 37 -43.470 -14.415 20.890 1.00 50.00 H ATOM 374 HB3 TRP 37 -43.840 -16.124 20.447 1.00 50.00 H ATOM 375 CG TRP 37 -43.633 -15.644 22.244 1.00 50.00 C ATOM 376 CD1 TRP 37 -43.785 -16.863 22.838 1.00 50.00 C ATOM 377 HE1 TRP 37 -43.238 -17.573 24.694 1.00 50.00 H ATOM 378 NE1 TRP 37 -43.247 -16.846 24.102 1.00 50.00 N ATOM 379 CD2 TRP 37 -42.959 -14.814 23.198 1.00 50.00 C ATOM 380 CE2 TRP 37 -42.734 -15.596 24.344 1.00 50.00 C ATOM 381 CH2 TRP 37 -41.679 -13.793 25.445 1.00 50.00 C ATOM 382 CZ2 TRP 37 -42.093 -15.095 25.477 1.00 50.00 C ATOM 383 CE3 TRP 37 -42.524 -13.485 23.193 1.00 50.00 C ATOM 384 CZ3 TRP 37 -41.889 -12.993 24.317 1.00 50.00 C ATOM 385 N VAL 38 -45.504 -13.290 18.960 1.00 50.00 N ATOM 386 CA VAL 38 -45.915 -12.784 17.687 1.00 50.00 C ATOM 387 C VAL 38 -45.550 -13.786 16.638 1.00 50.00 C ATOM 388 O VAL 38 -46.346 -14.069 15.745 1.00 50.00 O ATOM 389 H VAL 38 -44.918 -12.825 19.461 1.00 50.00 H ATOM 390 CB VAL 38 -45.281 -11.411 17.393 1.00 50.00 C ATOM 391 CG1 VAL 38 -45.559 -10.992 15.958 1.00 50.00 C ATOM 392 CG2 VAL 38 -45.798 -10.365 18.368 1.00 50.00 C ATOM 393 N TYR 39 -44.345 -14.379 16.726 1.00 50.00 N ATOM 394 CA TYR 39 -43.946 -15.273 15.681 1.00 50.00 C ATOM 395 C TYR 39 -44.919 -16.408 15.644 1.00 50.00 C ATOM 396 O TYR 39 -45.476 -16.717 14.593 1.00 50.00 O ATOM 397 H TYR 39 -43.794 -14.226 17.421 1.00 50.00 H ATOM 398 CB TYR 39 -42.515 -15.763 15.912 1.00 50.00 C ATOM 399 CG TYR 39 -41.458 -14.715 15.641 1.00 50.00 C ATOM 400 HH TYR 39 -38.139 -11.675 15.617 1.00 50.00 H ATOM 401 OH TYR 39 -38.548 -11.836 14.913 1.00 50.00 O ATOM 402 CZ TYR 39 -39.511 -12.788 15.152 1.00 50.00 C ATOM 403 CD1 TYR 39 -40.627 -14.265 16.658 1.00 50.00 C ATOM 404 CE1 TYR 39 -39.658 -13.308 16.420 1.00 50.00 C ATOM 405 CD2 TYR 39 -41.296 -14.181 14.369 1.00 50.00 C ATOM 406 CE2 TYR 39 -40.333 -13.223 14.112 1.00 50.00 C ATOM 407 N GLN 40 -45.164 -17.041 16.809 1.00 50.00 N ATOM 408 CA GLN 40 -46.056 -18.162 16.891 1.00 50.00 C ATOM 409 C GLN 40 -46.164 -18.512 18.337 1.00 50.00 C ATOM 410 O GLN 40 -45.873 -17.705 19.218 1.00 50.00 O ATOM 411 H GLN 40 -44.749 -16.740 17.549 1.00 50.00 H ATOM 412 CB GLN 40 -45.534 -19.325 16.044 1.00 50.00 C ATOM 413 CD GLN 40 -43.683 -20.989 15.611 1.00 50.00 C ATOM 414 CG GLN 40 -44.200 -19.883 16.511 1.00 50.00 C ATOM 415 OE1 GLN 40 -44.464 -21.745 15.033 1.00 50.00 O ATOM 416 HE21 GLN 40 -42.006 -21.723 14.968 1.00 50.00 H ATOM 417 HE22 GLN 40 -41.830 -20.510 15.930 1.00 50.00 H ATOM 418 NE2 GLN 40 -42.365 -21.084 15.490 1.00 50.00 N ATOM 419 N GLY 41 -46.612 -19.750 18.617 1.00 50.00 N ATOM 420 CA GLY 41 -46.670 -20.183 19.979 1.00 50.00 C ATOM 421 C GLY 41 -45.671 -21.285 20.095 1.00 50.00 C ATOM 422 O GLY 41 -45.724 -22.261 19.350 1.00 50.00 O ATOM 423 H GLY 41 -46.872 -20.304 17.957 1.00 50.00 H ATOM 424 N LYS 42 -44.713 -21.159 21.032 1.00 50.00 N ATOM 425 CA LYS 42 -43.760 -22.221 21.138 1.00 50.00 C ATOM 426 C LYS 42 -43.571 -22.610 22.566 1.00 50.00 C ATOM 427 O LYS 42 -43.905 -21.884 23.502 1.00 50.00 O ATOM 428 H LYS 42 -44.656 -20.447 21.579 1.00 50.00 H ATOM 429 CB LYS 42 -42.426 -21.807 20.516 1.00 50.00 C ATOM 430 CD LYS 42 -40.487 -20.213 20.476 1.00 50.00 C ATOM 431 CE LYS 42 -40.734 -19.774 19.042 1.00 50.00 C ATOM 432 CG LYS 42 -41.785 -20.592 21.169 1.00 50.00 C ATOM 433 HZ1 LYS 42 -39.667 -19.051 17.548 1.00 50.00 H ATOM 434 HZ2 LYS 42 -38.887 -19.957 18.373 1.00 50.00 H ATOM 435 HZ3 LYS 42 -39.158 -18.605 18.834 1.00 50.00 H ATOM 436 NZ LYS 42 -39.486 -19.299 18.383 1.00 50.00 N ATOM 437 N PRO 43 -43.085 -23.814 22.714 1.00 50.00 N ATOM 438 CA PRO 43 -42.833 -24.316 24.034 1.00 50.00 C ATOM 439 C PRO 43 -41.592 -23.764 24.653 1.00 50.00 C ATOM 440 O PRO 43 -40.606 -23.561 23.947 1.00 50.00 O ATOM 441 CB PRO 43 -42.706 -25.828 23.838 1.00 50.00 C ATOM 442 CD PRO 43 -43.144 -24.891 21.679 1.00 50.00 C ATOM 443 CG PRO 43 -43.396 -26.095 22.542 1.00 50.00 C ATOM 444 N VAL 44 -41.615 -23.517 25.978 1.00 50.00 N ATOM 445 CA VAL 44 -40.415 -23.059 26.603 1.00 50.00 C ATOM 446 C VAL 44 -39.936 -24.159 27.495 1.00 50.00 C ATOM 447 O VAL 44 -40.611 -24.566 28.440 1.00 50.00 O ATOM 448 H VAL 44 -42.360 -23.635 26.468 1.00 50.00 H ATOM 449 CB VAL 44 -40.647 -21.748 27.378 1.00 50.00 C ATOM 450 CG1 VAL 44 -39.365 -21.300 28.064 1.00 50.00 C ATOM 451 CG2 VAL 44 -41.165 -20.663 26.446 1.00 50.00 C ATOM 452 N MET 45 -38.735 -24.683 27.197 1.00 50.00 N ATOM 453 CA MET 45 -38.213 -25.776 27.961 1.00 50.00 C ATOM 454 C MET 45 -37.572 -25.248 29.200 1.00 50.00 C ATOM 455 O MET 45 -37.341 -24.049 29.362 1.00 50.00 O ATOM 456 H MET 45 -38.258 -24.344 26.513 1.00 50.00 H ATOM 457 CB MET 45 -37.216 -26.584 27.128 1.00 50.00 C ATOM 458 SD MET 45 -39.120 -28.377 26.212 1.00 50.00 S ATOM 459 CE MET 45 -38.170 -29.750 26.859 1.00 50.00 C ATOM 460 CG MET 45 -37.809 -27.188 25.865 1.00 50.00 C ATOM 461 N PRO 46 -37.320 -26.163 30.095 1.00 50.00 N ATOM 462 CA PRO 46 -36.678 -25.829 31.335 1.00 50.00 C ATOM 463 C PRO 46 -35.251 -25.479 31.068 1.00 50.00 C ATOM 464 O PRO 46 -34.733 -25.841 30.014 1.00 50.00 O ATOM 465 CB PRO 46 -36.819 -27.097 32.179 1.00 50.00 C ATOM 466 CD PRO 46 -37.847 -27.541 30.064 1.00 50.00 C ATOM 467 CG PRO 46 -37.929 -27.855 31.531 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 104.95 33.8 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 103.95 26.5 34 100.0 34 ARMSMC SURFACE . . . . . . . . 110.45 30.4 56 100.0 56 ARMSMC BURIED . . . . . . . . 74.10 50.0 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.64 46.9 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 87.34 44.8 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 78.98 52.9 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 91.10 40.7 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 56.78 80.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 56.71 60.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 51.19 61.9 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 50.27 69.2 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 58.16 59.1 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 44.66 66.7 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.51 62.5 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 72.98 57.1 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 81.25 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 68.51 62.5 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 52.39 83.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 52.39 83.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 90.63 50.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 52.39 83.3 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.75 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.75 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2214 CRMSCA SECONDARY STRUCTURE . . 7.53 17 100.0 17 CRMSCA SURFACE . . . . . . . . 7.66 29 100.0 29 CRMSCA BURIED . . . . . . . . 8.16 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.86 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 7.66 85 100.0 85 CRMSMC SURFACE . . . . . . . . 7.82 143 100.0 143 CRMSMC BURIED . . . . . . . . 8.05 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.18 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 10.15 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 9.44 84 100.0 84 CRMSSC SURFACE . . . . . . . . 10.14 127 100.0 127 CRMSSC BURIED . . . . . . . . 10.32 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.10 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 8.62 152 100.0 152 CRMSALL SURFACE . . . . . . . . 9.06 243 100.0 243 CRMSALL BURIED . . . . . . . . 9.26 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 42.938 0.758 0.788 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 42.947 0.757 0.785 17 100.0 17 ERRCA SURFACE . . . . . . . . 43.050 0.762 0.791 29 100.0 29 ERRCA BURIED . . . . . . . . 42.395 0.741 0.773 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 42.846 0.755 0.786 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 42.843 0.754 0.783 85 100.0 85 ERRMC SURFACE . . . . . . . . 42.892 0.757 0.787 143 100.0 143 ERRMC BURIED . . . . . . . . 42.625 0.749 0.780 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 40.576 0.690 0.735 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 40.643 0.692 0.737 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 40.961 0.697 0.739 84 100.0 84 ERRSC SURFACE . . . . . . . . 40.653 0.692 0.737 127 100.0 127 ERRSC BURIED . . . . . . . . 40.238 0.679 0.726 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.726 0.723 0.761 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 41.898 0.726 0.761 152 100.0 152 ERRALL SURFACE . . . . . . . . 41.788 0.725 0.763 243 100.0 243 ERRALL BURIED . . . . . . . . 41.439 0.714 0.753 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 3 5 10 26 35 35 DISTCA CA (P) 0.00 8.57 14.29 28.57 74.29 35 DISTCA CA (RMS) 0.00 1.74 1.92 3.15 6.22 DISTCA ALL (N) 0 11 28 63 196 296 296 DISTALL ALL (P) 0.00 3.72 9.46 21.28 66.22 296 DISTALL ALL (RMS) 0.00 1.59 2.16 3.35 6.65 DISTALL END of the results output