####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 81 ( 644), selected 81 , name T0547TS436_1-D1 # Molecule2: number of CA atoms 183 ( 1490), selected 81 , name T0547-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS436_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 58 7 - 342 4.83 6.44 LCS_AVERAGE: 27.47 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 40 - 342 1.40 7.52 LCS_AVERAGE: 8.08 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 42 - 341 0.87 7.32 LCS_AVERAGE: 5.82 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 81 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 7 D 7 3 5 58 3 4 5 10 24 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 8 I 8 4 5 58 3 3 5 6 7 9 16 28 32 47 58 61 64 67 71 73 73 76 76 79 LCS_GDT W 9 W 9 4 16 58 3 5 10 13 17 18 34 39 46 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT G 10 G 10 4 16 58 3 3 5 11 19 31 35 39 46 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT N 11 N 11 12 16 58 4 8 13 17 23 28 34 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 12 E 12 12 16 58 4 5 14 21 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT N 13 N 13 12 16 58 5 15 25 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT F 14 F 14 12 16 58 6 18 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 15 I 15 12 16 58 6 19 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 16 I 16 12 16 58 6 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT K 17 K 17 12 16 58 8 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT N 18 N 18 12 16 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT G 19 G 19 12 16 58 13 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT K 20 K 20 12 16 58 11 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT V 21 V 21 12 16 58 6 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT C 22 C 22 12 16 58 6 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 23 I 23 12 16 58 3 9 12 25 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT N 24 N 24 12 16 58 3 8 12 21 28 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT Y 25 Y 25 5 16 58 3 4 8 13 17 27 33 38 46 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 26 E 26 5 16 58 0 4 6 9 11 15 21 27 39 44 53 58 62 66 67 73 73 76 76 79 LCS_GDT K 27 K 27 5 6 58 3 4 6 9 13 15 18 21 28 34 50 57 62 65 67 69 72 76 76 79 LCS_GDT K 28 K 28 4 6 58 3 3 4 4 13 15 18 21 28 31 47 57 62 65 67 69 72 76 76 79 LCS_GDT P 29 P 29 4 6 58 3 3 7 9 13 15 18 21 28 33 47 57 62 65 65 69 72 76 76 79 LCS_GDT A 30 A 30 4 6 58 3 4 8 11 15 19 25 33 44 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 31 I 31 4 6 58 3 4 5 10 15 20 30 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 32 I 32 4 6 58 3 4 5 6 8 16 25 42 46 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT D 33 D 33 4 6 58 3 4 7 10 14 25 33 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 34 I 34 4 6 58 3 4 5 13 24 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT V 35 V 35 3 5 58 3 4 4 4 4 14 15 20 38 42 46 52 62 68 71 73 73 76 76 79 LCS_GDT K 36 K 36 3 5 58 3 4 4 4 5 23 26 35 39 42 51 56 62 68 71 73 73 76 76 79 LCS_GDT E 37 E 37 3 5 58 3 4 4 4 4 6 12 17 29 38 41 45 47 50 57 65 70 72 76 79 LCS_GDT L 38 L 38 3 5 58 3 3 4 4 6 6 8 10 13 17 27 33 38 47 50 54 55 57 58 69 LCS_GDT R 39 R 39 3 5 58 3 4 4 4 4 6 7 18 23 29 32 41 46 50 57 61 69 72 74 79 LCS_GDT D 40 D 40 3 25 58 2 7 17 23 24 28 35 38 42 44 51 58 64 68 71 73 73 76 76 79 LCS_GDT D 41 D 41 3 25 58 3 3 5 8 13 21 26 38 42 44 51 58 64 68 71 73 73 76 76 79 LCS_GDT G 42 G 42 22 25 58 3 10 21 23 24 26 35 38 42 44 51 58 64 68 71 73 73 76 76 79 LCS_GDT Y 43 Y 43 22 25 58 3 17 21 23 24 31 35 39 42 45 52 61 64 68 71 73 73 76 76 79 LCS_GDT K 44 K 44 22 25 58 3 16 21 23 29 31 35 39 42 47 57 61 64 68 71 73 73 76 76 79 LCS_GDT G 45 G 45 22 25 58 3 4 16 23 24 31 35 39 42 47 52 61 64 68 71 73 73 76 76 79 LCS_GDT P 46 P 46 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 47 L 47 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 48 L 48 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 49 L 49 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT R 50 R 50 22 25 58 13 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT F 51 F 51 22 25 58 15 20 26 28 29 32 35 41 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT A 330 A 330 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT V 331 V 331 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 332 L 332 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 333 I 333 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT A 334 A 334 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT P 335 P 335 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT V 336 V 336 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 337 L 337 22 25 58 13 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 338 E 338 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT L 339 L 339 22 25 58 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT F 340 F 340 22 25 58 14 20 26 28 29 32 35 42 46 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT S 341 S 341 22 25 58 8 18 25 28 29 32 35 42 46 52 58 61 64 68 71 73 73 76 76 79 LCS_GDT Q 342 Q 342 19 25 58 3 4 6 18 24 29 35 39 43 47 55 59 62 67 71 73 73 76 76 79 LCS_GDT T 531 T 531 4 5 39 3 4 4 4 5 7 13 16 23 29 32 36 45 48 53 55 59 66 71 75 LCS_GDT H 532 H 532 4 5 39 3 4 4 6 10 12 16 19 26 27 32 37 45 51 54 61 68 73 75 79 LCS_GDT P 533 P 533 4 5 39 3 4 13 17 21 24 32 38 42 44 47 52 62 68 71 73 73 76 76 79 LCS_GDT T 534 T 534 4 5 39 3 10 12 15 23 28 34 41 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 535 E 535 5 8 39 3 5 8 11 16 22 26 34 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT A 536 A 536 6 8 38 4 5 6 10 16 22 25 32 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 537 I 537 6 8 38 4 5 8 11 16 22 25 34 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 538 I 538 6 8 38 4 5 6 9 14 19 25 34 45 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT S 539 S 539 6 10 36 4 5 8 12 15 19 25 32 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 540 I 540 6 10 36 4 5 6 10 15 20 26 34 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT N 541 N 541 6 10 36 3 5 8 10 14 18 21 25 27 34 47 58 62 68 71 73 73 76 76 79 LCS_GDT E 542 E 542 5 10 26 3 4 6 10 14 19 21 25 33 37 55 59 64 68 71 73 73 76 76 79 LCS_GDT K 543 K 543 5 10 26 3 4 5 11 15 20 25 34 41 50 54 61 64 68 71 73 73 76 76 79 LCS_GDT G 544 G 544 5 10 26 3 4 6 11 15 20 25 34 41 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT Y 545 Y 545 3 10 26 3 4 6 16 24 31 34 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 546 E 546 4 10 26 1 4 6 11 15 27 34 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT V 547 V 547 4 10 23 3 3 6 8 12 16 22 29 38 51 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 548 E 548 4 10 23 3 4 8 11 15 25 31 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT G 549 G 549 5 10 23 3 5 12 13 17 27 33 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 550 I 550 5 10 23 4 5 8 11 16 27 33 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT I 551 I 551 5 10 23 4 5 8 11 16 25 32 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT E 552 E 552 5 10 23 4 5 8 11 15 21 33 42 47 53 58 61 64 68 71 73 73 76 76 79 LCS_GDT A 553 A 553 5 10 23 4 4 8 11 15 19 28 33 43 50 54 61 64 68 71 73 73 76 76 79 LCS_AVERAGE LCS_A: 13.79 ( 5.82 8.08 27.47 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 20 26 28 29 32 35 42 47 53 58 61 64 68 71 73 73 76 76 79 GDT PERCENT_AT 8.20 10.93 14.21 15.30 15.85 17.49 19.13 22.95 25.68 28.96 31.69 33.33 34.97 37.16 38.80 39.89 39.89 41.53 41.53 43.17 GDT RMS_LOCAL 0.35 0.51 0.85 0.97 1.08 1.49 1.79 2.73 3.14 3.33 3.53 3.72 3.89 4.33 4.54 4.66 4.66 4.92 4.92 5.44 GDT RMS_ALL_AT 6.64 6.59 6.42 6.39 6.36 6.24 6.29 6.18 6.22 6.28 6.38 6.23 6.23 6.02 5.98 5.99 5.99 6.01 6.01 5.90 # Checking swapping # possible swapping detected: D 7 D 7 # possible swapping detected: E 12 E 12 # possible swapping detected: E 37 E 37 # possible swapping detected: F 51 F 51 # possible swapping detected: E 542 E 542 # possible swapping detected: Y 545 Y 545 # possible swapping detected: E 548 E 548 # possible swapping detected: E 552 E 552 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 7 D 7 2.616 0 0.274 1.257 4.732 66.071 54.405 LGA I 8 I 8 5.483 0 0.549 0.484 12.748 32.976 17.202 LGA W 9 W 9 4.581 0 0.434 1.205 7.400 32.976 20.646 LGA G 10 G 10 4.602 0 0.660 0.660 4.602 47.619 47.619 LGA N 11 N 11 3.810 0 0.551 1.337 7.469 50.119 36.905 LGA E 12 E 12 2.388 0 0.080 0.332 7.277 69.048 44.550 LGA N 13 N 13 1.377 0 0.207 0.207 3.791 86.071 68.095 LGA F 14 F 14 0.650 0 0.062 1.213 6.282 90.476 63.377 LGA I 15 I 15 0.987 0 0.067 1.089 3.478 85.952 75.595 LGA I 16 I 16 1.160 0 0.037 0.587 1.505 79.286 80.357 LGA K 17 K 17 1.708 0 0.424 1.112 2.734 79.286 74.127 LGA N 18 N 18 3.429 0 0.033 0.861 6.173 51.905 44.405 LGA G 19 G 19 2.233 0 0.145 0.145 2.743 66.905 66.905 LGA K 20 K 20 1.504 0 0.041 0.718 4.140 77.143 64.762 LGA V 21 V 21 1.044 0 0.063 1.110 3.332 81.429 77.007 LGA C 22 C 22 1.278 0 0.161 0.732 3.170 81.429 76.190 LGA I 23 I 23 1.583 0 0.083 0.653 3.476 72.976 64.167 LGA N 24 N 24 2.198 0 0.149 0.868 4.424 56.667 60.060 LGA Y 25 Y 25 4.694 0 0.375 1.558 9.260 27.381 25.397 LGA E 26 E 26 7.596 0 0.169 0.867 9.647 9.048 5.344 LGA K 27 K 27 8.934 0 0.425 1.122 12.177 2.143 1.270 LGA K 28 K 28 9.110 0 0.430 1.363 15.800 1.429 0.635 LGA P 29 P 29 9.242 0 0.491 0.846 11.397 3.214 1.837 LGA A 30 A 30 5.268 0 0.225 0.251 5.863 42.619 39.333 LGA I 31 I 31 3.793 0 0.181 0.330 5.502 46.667 37.857 LGA I 32 I 32 4.219 0 0.172 1.313 6.703 40.238 36.726 LGA D 33 D 33 3.640 0 0.343 0.526 7.934 56.071 35.774 LGA I 34 I 34 3.363 0 0.150 0.939 9.578 42.143 26.190 LGA V 35 V 35 8.496 0 0.564 0.802 12.280 5.595 3.197 LGA K 36 K 36 9.281 0 0.494 1.266 13.117 1.548 11.958 LGA E 37 E 37 13.128 0 0.520 1.090 15.749 0.000 0.000 LGA L 38 L 38 16.304 0 0.545 1.413 21.229 0.000 0.000 LGA R 39 R 39 13.780 0 0.615 1.701 21.827 0.000 0.000 LGA D 40 D 40 9.239 0 0.454 0.750 10.556 0.714 10.714 LGA D 41 D 41 8.569 0 0.658 1.208 9.621 3.214 3.810 LGA G 42 G 42 8.267 0 0.330 0.330 8.267 6.548 6.548 LGA Y 43 Y 43 6.660 0 0.561 0.518 11.095 21.667 10.317 LGA K 44 K 44 5.509 0 0.080 0.903 7.750 18.333 20.053 LGA G 45 G 45 5.660 0 0.057 0.057 5.660 42.619 42.619 LGA P 46 P 46 2.978 0 0.033 0.101 3.352 51.786 53.061 LGA L 47 L 47 3.186 0 0.079 0.873 6.452 55.357 44.643 LGA L 48 L 48 3.006 0 0.031 0.800 3.561 50.119 59.702 LGA L 49 L 49 3.254 0 0.094 0.968 5.780 50.000 39.881 LGA R 50 R 50 3.497 0 0.028 1.463 9.096 46.667 31.948 LGA F 51 F 51 3.755 0 0.033 1.027 9.402 46.667 26.061 LGA A 330 A 330 2.408 0 0.047 0.167 2.465 64.762 64.762 LGA V 331 V 331 1.925 0 0.032 0.346 2.558 68.810 68.367 LGA L 332 L 332 1.859 0 0.046 0.935 3.753 72.857 70.238 LGA I 333 I 333 2.036 0 0.039 0.494 2.893 64.762 63.810 LGA A 334 A 334 2.007 0 0.030 0.044 2.007 70.833 69.619 LGA P 335 P 335 1.718 0 0.069 0.511 3.749 70.833 64.218 LGA V 336 V 336 1.412 0 0.075 0.106 1.909 77.143 80.272 LGA L 337 L 337 1.628 0 0.137 0.647 3.591 75.000 65.298 LGA E 338 E 338 1.467 0 0.039 1.056 7.303 77.143 53.069 LGA L 339 L 339 1.503 0 0.042 0.355 1.745 75.000 79.345 LGA F 340 F 340 2.380 0 0.027 1.110 4.230 61.190 56.277 LGA S 341 S 341 3.756 0 0.263 0.610 4.665 42.024 42.460 LGA Q 342 Q 342 7.241 0 0.246 1.251 12.457 8.690 4.339 LGA T 531 T 531 18.229 0 0.154 1.001 19.768 0.000 0.000 LGA H 532 H 532 15.411 0 0.250 1.048 20.127 0.000 0.000 LGA P 533 P 533 9.404 0 0.492 0.583 13.968 5.357 3.061 LGA T 534 T 534 4.476 0 0.513 0.997 6.117 40.952 38.299 LGA E 535 E 535 5.600 0 0.122 1.097 8.580 25.119 14.127 LGA A 536 A 536 6.049 0 0.101 0.144 6.788 19.286 18.095 LGA I 537 I 537 5.872 0 0.219 1.280 9.158 16.786 13.452 LGA I 538 I 538 6.053 0 0.050 1.128 9.467 20.357 13.631 LGA S 539 S 539 5.970 0 0.086 0.122 7.403 16.429 14.286 LGA I 540 I 540 5.870 0 0.091 0.591 7.900 19.286 17.500 LGA N 541 N 541 7.713 0 0.211 1.116 12.810 10.119 5.476 LGA E 542 E 542 6.977 0 0.585 1.583 8.903 9.048 6.984 LGA K 543 K 543 7.006 0 0.148 0.661 14.208 12.619 5.979 LGA G 544 G 544 5.711 0 0.127 0.127 6.001 44.286 44.286 LGA Y 545 Y 545 2.322 0 0.083 0.981 3.499 57.262 61.151 LGA E 546 E 546 3.577 0 0.284 0.879 5.732 48.452 39.153 LGA V 547 V 547 5.493 0 0.302 0.835 9.812 31.667 19.864 LGA E 548 E 548 4.464 0 0.070 0.995 12.513 49.048 23.810 LGA G 549 G 549 3.842 0 0.524 0.524 3.842 45.000 45.000 LGA I 550 I 550 3.985 0 0.048 1.369 7.374 38.690 34.048 LGA I 551 I 551 4.347 0 0.048 0.621 5.903 35.714 29.167 LGA E 552 E 552 4.044 0 0.028 1.079 4.645 35.833 50.635 LGA A 553 A 553 6.300 0 0.194 0.220 7.337 19.405 17.524 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 81 324 324 100.00 644 644 100.00 183 SUMMARY(RMSD_GDC): 5.869 5.814 6.795 18.087 15.895 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 81 183 4.0 42 2.73 22.268 19.035 1.482 LGA_LOCAL RMSD: 2.735 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.177 Number of assigned atoms: 81 Std_ASGN_ATOMS RMSD: 5.869 Standard rmsd on all 81 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.181723 * X + -0.071160 * Y + 0.980772 * Z + -59.915245 Y_new = 0.859652 * X + 0.495775 * Y + -0.123311 * Z + 73.825867 Z_new = -0.477467 * X + 0.865531 * Y + 0.151267 * Z + -37.637341 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.362471 0.497770 1.397776 [DEG: 78.0639 28.5201 80.0867 ] ZXZ: 1.445724 1.418947 -0.504107 [DEG: 82.8339 81.2997 -28.8832 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS436_1-D1 REMARK 2: T0547-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS436_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 81 183 4.0 42 2.73 19.035 5.87 REMARK ---------------------------------------------------------- MOLECULE T0547TS436_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT 1TWI_A ATOM 1 CA ASP 7 -18.628 73.108 -39.269 1.00 0.57 C ATOM 2 N ASP 7 -19.512 72.025 -39.340 1.00 0.57 N ATOM 5 C ASP 7 -18.375 73.605 -40.711 1.00 0.57 C ATOM 6 O ASP 7 -18.916 74.679 -41.058 1.00 0.57 O ATOM 7 CB ASP 7 -17.325 72.699 -38.501 1.00 0.57 C ATOM 10 CG ASP 7 -16.931 71.212 -38.651 1.00 0.57 C ATOM 11 OD1 ASP 7 -16.560 70.757 -39.765 1.00 0.57 O ATOM 12 OD2 ASP 7 -16.978 70.448 -37.651 1.00 0.57 O ATOM 13 CA ILE 8 -17.585 73.158 -42.910 1.00 0.57 C ATOM 14 N ILE 8 -17.616 72.894 -41.517 1.00 0.57 N ATOM 17 C ILE 8 -19.006 72.994 -43.489 1.00 0.57 C ATOM 18 O ILE 8 -19.401 71.894 -43.923 1.00 0.57 O ATOM 19 CB ILE 8 -16.490 72.298 -43.661 1.00 0.57 C ATOM 21 CG1 ILE 8 -15.066 72.748 -43.155 1.00 0.57 C ATOM 24 CG2 ILE 8 -16.656 72.362 -45.224 1.00 0.57 C ATOM 28 CD1 ILE 8 -13.847 72.261 -43.991 1.00 0.57 C ATOM 32 CA TRP 9 -20.880 74.245 -44.235 1.00 0.57 C ATOM 33 N TRP 9 -19.729 74.064 -43.452 1.00 0.57 N ATOM 36 C TRP 9 -20.504 75.520 -45.017 1.00 0.57 C ATOM 37 O TRP 9 -19.732 75.402 -45.993 1.00 0.57 O ATOM 38 CB TRP 9 -22.125 74.329 -43.297 1.00 0.57 C ATOM 41 CG TRP 9 -22.241 73.179 -42.314 1.00 0.57 C ATOM 42 CD1 TRP 9 -22.412 71.834 -42.642 1.00 0.57 C ATOM 43 CD2 TRP 9 -22.283 73.246 -40.928 1.00 0.57 C ATOM 44 NE1 TRP 9 -22.570 71.121 -41.503 1.00 0.57 N ATOM 45 CE2 TRP 9 -22.505 71.967 -40.458 1.00 0.57 C ATOM 46 CE3 TRP 9 -22.161 74.332 -40.053 1.00 0.57 C ATOM 47 CZ2 TRP 9 -22.641 71.700 -39.094 1.00 0.57 C ATOM 48 CZ3 TRP 9 -22.291 74.085 -38.674 1.00 0.57 C ATOM 49 CH2 TRP 9 -22.538 72.780 -38.198 1.00 0.57 H ATOM 56 CA GLY 10 -20.068 77.811 -44.679 1.00 0.57 C ATOM 57 N GLY 10 -20.901 76.675 -44.558 1.00 0.57 N ATOM 61 C GLY 10 -18.745 77.640 -43.885 1.00 0.57 C ATOM 62 O GLY 10 -18.585 76.596 -43.221 1.00 0.57 O ATOM 63 CA ASN 11 -16.620 78.606 -43.254 1.00 0.57 C ATOM 64 N ASN 11 -17.868 78.613 -43.939 1.00 0.57 N ATOM 67 C ASN 11 -15.734 77.370 -43.616 1.00 0.57 C ATOM 68 O ASN 11 -15.341 76.588 -42.718 1.00 0.57 O ATOM 69 CB ASN 11 -16.758 78.970 -41.724 1.00 0.57 C ATOM 72 CG ASN 11 -17.957 78.356 -40.975 1.00 0.57 C ATOM 73 OD1 ASN 11 -18.006 77.167 -40.796 1.00 0.57 O ATOM 74 ND2 ASN 11 -18.980 79.158 -40.493 1.00 0.57 N ATOM 77 N GLU 12 -15.417 77.225 -44.877 1.00 0.48 N ATOM 78 CA GLU 12 -14.982 75.982 -45.408 1.00 0.22 C ATOM 79 C GLU 12 -13.482 75.717 -45.158 1.00 0.44 C ATOM 80 O GLU 12 -12.752 75.392 -46.116 1.00 1.33 O ATOM 81 CB GLU 12 -15.244 75.997 -46.948 1.00 0.61 C ATOM 82 CG GLU 12 -16.703 76.405 -47.345 1.00 0.64 C ATOM 89 CD GLU 12 -16.885 77.934 -47.464 1.00 0.57 C ATOM 90 OE1 GLU 12 -16.188 78.589 -48.277 1.00 0.57 O ATOM 91 OE2 GLU 12 -17.731 78.532 -46.753 1.00 0.57 O ATOM 92 N ASN 13 -13.057 75.832 -43.936 1.00 0.40 N ATOM 93 CA ASN 13 -11.682 75.759 -43.608 1.00 0.20 C ATOM 94 C ASN 13 -11.560 75.464 -42.081 1.00 0.25 C ATOM 95 O ASN 13 -10.426 75.555 -41.571 1.00 0.32 O ATOM 96 CB ASN 13 -10.913 77.060 -44.032 1.00 0.40 C ATOM 101 CG ASN 13 -10.804 77.239 -45.563 1.00 0.57 C ATOM 102 OD1 ASN 13 -10.217 76.417 -46.227 1.00 0.57 O ATOM 103 ND2 ASN 13 -11.361 78.340 -46.182 1.00 0.57 N ATOM 106 N PHE 14 -12.620 75.108 -41.381 1.00 0.25 N ATOM 107 CA PHE 14 -12.548 74.855 -39.982 1.00 0.25 C ATOM 108 C PHE 14 -13.083 73.467 -39.572 1.00 0.44 C ATOM 109 O PHE 14 -14.214 73.115 -39.957 1.00 1.10 O ATOM 110 CB PHE 14 -13.270 76.012 -39.236 1.00 0.28 C ATOM 115 CG PHE 14 -14.528 75.787 -38.413 1.00 0.57 C ATOM 116 CD1 PHE 14 -15.789 75.884 -39.018 1.00 0.57 C ATOM 117 CD2 PHE 14 -14.439 75.663 -37.015 1.00 0.57 C ATOM 118 CE1 PHE 14 -16.946 75.887 -38.228 1.00 0.57 C ATOM 119 CE2 PHE 14 -15.598 75.644 -36.230 1.00 0.57 C ATOM 120 CZ PHE 14 -16.850 75.768 -36.840 1.00 0.57 C ATOM 126 N ILE 15 -12.301 72.727 -38.835 1.00 0.17 N ATOM 127 CA ILE 15 -12.541 71.341 -38.623 1.00 0.22 C ATOM 128 C ILE 15 -12.325 70.993 -37.123 1.00 0.21 C ATOM 129 O ILE 15 -11.787 71.844 -36.384 1.00 0.16 O ATOM 130 CB ILE 15 -11.623 70.510 -39.611 1.00 0.34 C ATOM 134 CG1 ILE 15 -11.897 70.954 -41.103 1.00 0.57 C ATOM 137 CG2 ILE 15 -11.820 68.964 -39.456 1.00 0.57 C ATOM 141 CD1 ILE 15 -11.098 70.177 -42.194 1.00 0.57 C ATOM 145 N ILE 16 -12.728 69.824 -36.688 1.00 0.27 N ATOM 146 CA ILE 16 -12.421 69.349 -35.384 1.00 0.39 C ATOM 147 C ILE 16 -11.392 68.210 -35.554 1.00 0.46 C ATOM 148 O ILE 16 -11.727 67.206 -36.212 1.00 0.53 O ATOM 149 CB ILE 16 -13.679 68.795 -34.609 1.00 0.42 C ATOM 150 CG1 ILE 16 -15.035 69.501 -34.966 1.00 0.81 C ATOM 151 CG2 ILE 16 -13.406 68.766 -33.067 1.00 0.73 C ATOM 152 CD1 ILE 16 -15.117 70.997 -34.559 1.00 1.21 C ATOM 164 N LYS 17 -10.228 68.334 -34.986 1.00 0.47 N ATOM 165 CA LYS 17 -9.323 67.240 -34.928 1.00 0.46 C ATOM 166 C LYS 17 -9.266 66.815 -33.454 1.00 0.25 C ATOM 167 O LYS 17 -8.849 67.619 -32.593 1.00 0.31 O ATOM 168 CB LYS 17 -7.914 67.608 -35.493 1.00 0.65 C ATOM 169 CG LYS 17 -7.999 67.920 -37.026 1.00 0.67 C ATOM 170 CD LYS 17 -6.632 68.253 -37.715 1.00 0.85 C ATOM 171 CE LYS 17 -5.802 69.354 -36.986 1.00 1.00 C ATOM 172 NZ LYS 17 -4.847 70.054 -37.958 1.00 1.50 N ATOM 186 N ASN 18 -9.705 65.620 -33.170 1.00 0.49 N ATOM 187 CA ASN 18 -9.514 65.041 -31.895 1.00 0.66 C ATOM 188 C ASN 18 -10.157 65.935 -30.809 1.00 0.65 C ATOM 189 O ASN 18 -9.402 66.529 -30.015 1.00 0.67 O ATOM 190 CB ASN 18 -7.986 64.800 -31.627 1.00 0.75 C ATOM 191 CG ASN 18 -7.279 64.009 -32.754 1.00 0.72 C ATOM 196 OD1 ASN 18 -7.248 64.449 -33.880 1.00 0.57 O ATOM 197 ND2 ASN 18 -6.651 62.808 -32.480 1.00 0.57 N ATOM 200 N GLY 19 -11.446 66.125 -30.835 1.00 0.65 N ATOM 201 CA GLY 19 -12.063 66.987 -29.901 1.00 0.60 C ATOM 202 C GLY 19 -11.628 68.481 -29.925 1.00 0.51 C ATOM 203 O GLY 19 -12.307 69.252 -29.213 1.00 1.02 O ATOM 207 N LYS 20 -10.578 68.880 -30.617 1.00 0.19 N ATOM 208 CA LYS 20 -10.130 70.226 -30.601 1.00 0.24 C ATOM 209 C LYS 20 -10.354 70.953 -31.949 1.00 0.36 C ATOM 210 O LYS 20 -10.033 70.398 -33.024 1.00 0.72 O ATOM 211 CB LYS 20 -8.594 70.287 -30.323 1.00 0.30 C ATOM 212 CG LYS 20 -8.216 69.759 -28.907 1.00 0.30 C ATOM 213 CD LYS 20 -6.667 69.784 -28.719 1.00 0.45 C ATOM 222 CE LYS 20 -6.229 69.145 -27.368 1.00 0.57 C ATOM 225 NZ LYS 20 -6.856 69.877 -26.177 1.00 0.57 N ATOM 229 N VAL 21 -10.840 72.157 -31.875 1.00 0.14 N ATOM 230 CA VAL 21 -11.111 72.934 -33.032 1.00 0.22 C ATOM 231 C VAL 21 -9.855 73.506 -33.718 1.00 0.20 C ATOM 232 O VAL 21 -9.041 74.195 -33.068 1.00 0.16 O ATOM 233 CB VAL 21 -12.048 74.132 -32.669 1.00 0.23 C ATOM 237 CG1 VAL 21 -12.347 75.005 -33.936 1.00 0.57 C ATOM 238 CG2 VAL 21 -13.439 73.570 -32.211 1.00 0.57 C ATOM 245 N CYS 22 -9.785 73.321 -34.998 1.00 0.30 N ATOM 246 CA CYS 22 -8.783 73.905 -35.800 1.00 0.16 C ATOM 247 C CYS 22 -9.398 74.829 -36.863 1.00 0.15 C ATOM 248 O CYS 22 -10.299 74.377 -37.602 1.00 0.53 O ATOM 249 CB CYS 22 -7.933 72.764 -36.418 1.00 0.36 C ATOM 254 SG CYS 22 -8.905 71.592 -37.423 1.00 0.57 S ATOM 256 N ILE 23 -8.885 76.030 -36.960 1.00 0.45 N ATOM 257 CA ILE 23 -9.013 76.798 -38.153 1.00 0.27 C ATOM 258 C ILE 23 -7.816 76.207 -38.910 1.00 0.76 C ATOM 259 O ILE 23 -6.672 76.385 -38.434 1.00 0.84 O ATOM 260 CB ILE 23 -9.157 78.342 -37.842 1.00 0.25 C ATOM 261 CG1 ILE 23 -10.463 78.490 -36.985 1.00 0.48 C ATOM 262 CG2 ILE 23 -9.377 79.183 -39.143 1.00 0.38 C ATOM 263 CD1 ILE 23 -10.727 79.895 -36.376 1.00 1.01 C ATOM 275 CA ASN 24 -7.630 74.040 -39.950 1.00 0.57 C ATOM 276 N ASN 24 -8.093 75.391 -39.901 1.00 0.57 N ATOM 279 C ASN 24 -6.100 73.811 -40.155 1.00 0.57 C ATOM 280 O ASN 24 -5.705 73.074 -41.079 1.00 0.57 O ATOM 281 CB ASN 24 -8.523 73.309 -41.021 1.00 0.57 C ATOM 284 CG ASN 24 -8.070 71.896 -41.442 1.00 0.57 C ATOM 285 OD1 ASN 24 -7.989 71.008 -40.628 1.00 0.57 O ATOM 286 ND2 ASN 24 -7.737 71.651 -42.764 1.00 0.57 N ATOM 289 CA TYR 25 -3.924 74.642 -39.707 1.00 0.57 C ATOM 290 N TYR 25 -5.283 74.432 -39.359 1.00 0.57 N ATOM 293 C TYR 25 -3.248 75.534 -38.631 1.00 0.57 C ATOM 294 O TYR 25 -2.022 75.750 -38.757 1.00 0.57 O ATOM 295 CB TYR 25 -3.729 75.240 -41.159 1.00 0.57 C ATOM 298 CG TYR 25 -4.898 76.125 -41.547 1.00 0.57 C ATOM 299 CD1 TYR 25 -5.121 77.314 -40.845 1.00 0.57 C ATOM 300 CD2 TYR 25 -5.856 75.672 -42.471 1.00 0.57 C ATOM 303 CE1 TYR 25 -6.301 77.964 -40.993 1.00 0.57 C ATOM 304 CE2 TYR 25 -7.095 76.279 -42.533 1.00 0.57 C ATOM 307 CZ TYR 25 -7.332 77.416 -41.752 1.00 0.57 C ATOM 308 OH TYR 25 -8.522 77.940 -41.680 1.00 0.57 H ATOM 310 CA GLU 26 -3.682 75.239 -36.371 1.00 0.57 C ATOM 311 N GLU 26 -3.940 75.915 -37.595 1.00 0.57 N ATOM 314 C GLU 26 -4.816 75.484 -35.336 1.00 0.57 C ATOM 315 O GLU 26 -5.988 75.615 -35.772 1.00 0.57 O ATOM 316 CB GLU 26 -2.211 75.408 -35.808 1.00 0.57 C ATOM 319 CG GLU 26 -1.471 74.043 -35.626 1.00 0.57 C ATOM 322 CD GLU 26 -1.092 73.404 -36.973 1.00 0.57 C ATOM 323 OE1 GLU 26 -0.217 73.944 -37.702 1.00 0.57 O ATOM 324 OE2 GLU 26 -1.645 72.336 -37.345 1.00 0.57 O ATOM 325 N LYS 27 -4.527 75.445 -34.053 1.00 0.72 N ATOM 326 CA LYS 27 -5.294 74.658 -33.171 1.00 0.19 C ATOM 327 C LYS 27 -5.874 75.627 -32.149 1.00 0.39 C ATOM 328 O LYS 27 -5.203 75.858 -31.117 1.00 1.26 O ATOM 329 CB LYS 27 -4.357 73.629 -32.459 1.00 0.39 C ATOM 330 CG LYS 27 -5.110 72.481 -31.713 1.00 1.20 C ATOM 337 CD LYS 27 -5.952 71.533 -32.621 1.00 0.57 C ATOM 340 CE LYS 27 -5.144 70.841 -33.760 1.00 0.57 C ATOM 343 NZ LYS 27 -4.864 71.783 -34.935 1.00 0.57 N ATOM 347 N LYS 28 -7.060 76.120 -32.375 1.00 0.09 N ATOM 348 CA LYS 28 -7.427 77.372 -31.833 1.00 0.19 C ATOM 349 C LYS 28 -7.258 77.508 -30.307 1.00 0.23 C ATOM 350 O LYS 28 -7.014 78.634 -29.838 1.00 0.38 O ATOM 351 CB LYS 28 -8.921 77.642 -31.994 1.00 0.30 C ATOM 356 CG LYS 28 -9.434 77.675 -33.454 1.00 0.57 C ATOM 359 CD LYS 28 -10.870 78.283 -33.464 1.00 0.57 C ATOM 362 CE LYS 28 -11.753 77.872 -32.262 1.00 0.57 C ATOM 365 NZ LYS 28 -11.576 78.840 -31.100 1.00 0.57 N ATOM 369 N PRO 29 -7.359 76.454 -29.469 1.00 0.24 N ATOM 370 CA PRO 29 -6.835 76.541 -28.104 1.00 0.35 C ATOM 371 C PRO 29 -5.477 77.225 -28.125 1.00 0.06 C ATOM 372 O PRO 29 -5.462 78.440 -27.814 1.00 0.67 O ATOM 373 CB PRO 29 -6.866 75.110 -27.539 1.00 0.60 C ATOM 377 CG PRO 29 -8.035 74.451 -28.306 1.00 0.57 C ATOM 380 CD PRO 29 -7.902 75.091 -29.711 1.00 0.57 C ATOM 383 N ALA 30 -4.464 76.625 -28.667 1.00 0.28 N ATOM 384 CA ALA 30 -3.346 77.410 -29.006 1.00 0.42 C ATOM 385 C ALA 30 -3.636 78.014 -30.360 1.00 1.22 C ATOM 386 O ALA 30 -3.180 77.438 -31.370 1.00 3.15 O ATOM 387 CB ALA 30 -2.125 76.525 -28.903 1.00 0.94 C ATOM 393 N ILE 31 -4.466 79.031 -30.355 1.00 0.60 N ATOM 394 CA ILE 31 -4.013 80.310 -30.731 1.00 0.23 C ATOM 395 C ILE 31 -4.644 81.334 -29.727 1.00 0.52 C ATOM 396 O ILE 31 -4.239 82.503 -29.796 1.00 0.91 O ATOM 397 CB ILE 31 -4.460 80.608 -32.217 1.00 0.40 C ATOM 398 CG1 ILE 31 -4.279 79.413 -33.236 1.00 0.51 C ATOM 399 CD1 ILE 31 -4.972 79.633 -34.615 1.00 0.88 C ATOM 405 CG2 ILE 31 -3.656 81.821 -32.834 1.00 0.57 C ATOM 412 N ILE 32 -5.480 80.996 -28.830 1.00 0.32 N ATOM 413 CA ILE 32 -5.447 81.709 -27.599 1.00 0.26 C ATOM 414 C ILE 32 -3.999 81.585 -27.083 1.00 0.65 C ATOM 415 O ILE 32 -3.285 82.592 -26.874 1.00 1.29 O ATOM 416 CB ILE 32 -6.428 81.269 -26.409 1.00 0.88 C ATOM 420 CG1 ILE 32 -6.339 79.871 -25.666 1.00 0.57 C ATOM 423 CG2 ILE 32 -7.884 81.543 -26.736 1.00 0.57 C ATOM 427 CD1 ILE 32 -6.749 79.907 -24.158 1.00 0.57 C ATOM 431 N ASP 33 -3.576 80.374 -26.974 1.00 0.52 N ATOM 432 CA ASP 33 -2.275 80.067 -26.573 1.00 1.14 C ATOM 433 C ASP 33 -1.343 80.310 -27.861 1.00 2.09 C ATOM 434 O ASP 33 -1.170 81.528 -28.100 1.00 2.93 O ATOM 435 CB ASP 33 -2.419 78.705 -25.758 1.00 0.55 C ATOM 436 CG ASP 33 -3.175 78.847 -24.414 1.00 0.59 C ATOM 441 OD1 ASP 33 -3.872 77.887 -23.989 1.00 0.57 O ATOM 442 OD2 ASP 33 -3.110 79.911 -23.745 1.00 0.57 O ATOM 443 CA ILE 34 -0.074 79.633 -29.858 1.00 0.57 C ATOM 444 N ILE 34 -0.716 79.360 -28.574 1.00 0.57 N ATOM 447 C ILE 34 -0.558 78.847 -31.154 1.00 0.57 C ATOM 448 O ILE 34 -1.162 79.516 -32.011 1.00 0.57 O ATOM 449 CB ILE 34 1.511 79.512 -29.863 1.00 0.57 C ATOM 451 CG1 ILE 34 2.063 78.268 -29.083 1.00 0.57 C ATOM 454 CG2 ILE 34 2.208 80.813 -29.369 1.00 0.57 C ATOM 458 CD1 ILE 34 3.462 77.791 -29.570 1.00 0.57 C ATOM 462 CA VAL 35 -0.571 76.854 -32.569 1.00 0.57 C ATOM 463 N VAL 35 -0.247 77.575 -31.360 1.00 0.57 N ATOM 466 C VAL 35 -0.454 75.341 -32.201 1.00 0.57 C ATOM 467 O VAL 35 0.571 74.709 -32.530 1.00 0.57 O ATOM 468 CB VAL 35 0.231 77.220 -33.889 1.00 0.57 C ATOM 470 CG1 VAL 35 1.703 77.637 -33.584 1.00 0.57 C ATOM 471 CG2 VAL 35 -0.466 78.293 -34.791 1.00 0.57 C ATOM 478 CA LYS 36 -1.289 73.597 -30.759 1.00 0.57 C ATOM 479 N LYS 36 -1.452 74.797 -31.541 1.00 0.57 N ATOM 482 C LYS 36 -1.269 72.320 -31.633 1.00 0.57 C ATOM 483 O LYS 36 -2.069 71.398 -31.366 1.00 0.57 O ATOM 484 CB LYS 36 -2.216 73.440 -29.458 1.00 0.57 C ATOM 487 CG LYS 36 -2.306 72.061 -28.721 1.00 0.57 C ATOM 490 CD LYS 36 -2.375 72.173 -27.158 1.00 0.57 C ATOM 493 CE LYS 36 -3.583 73.005 -26.631 1.00 0.57 C ATOM 496 NZ LYS 36 -4.898 72.335 -27.023 1.00 0.57 N ATOM 500 CA GLU 37 0.101 70.863 -32.827 1.00 0.57 C ATOM 501 N GLU 37 -0.324 72.149 -32.497 1.00 0.57 N ATOM 504 C GLU 37 0.917 70.331 -31.575 1.00 0.57 C ATOM 505 O GLU 37 2.127 70.080 -31.702 1.00 0.57 O ATOM 506 CB GLU 37 0.868 70.872 -34.161 1.00 0.57 C ATOM 509 CG GLU 37 1.193 69.439 -34.690 1.00 0.57 C ATOM 512 CD GLU 37 1.828 69.505 -36.090 1.00 0.57 C ATOM 513 OE1 GLU 37 1.184 70.001 -37.051 1.00 0.57 O ATOM 514 OE2 GLU 37 2.990 69.056 -36.278 1.00 0.57 O ATOM 515 CA LEU 38 0.904 70.022 -29.187 1.00 0.57 C ATOM 516 N LEU 38 0.263 70.211 -30.443 1.00 0.57 N ATOM 519 C LEU 38 1.885 71.196 -28.891 1.00 0.57 C ATOM 520 O LEU 38 3.099 71.011 -29.111 1.00 0.57 O ATOM 521 CB LEU 38 1.544 68.594 -29.050 1.00 0.57 C ATOM 524 CG LEU 38 0.524 67.391 -29.089 1.00 0.57 C ATOM 525 CD1 LEU 38 -0.547 67.456 -27.950 1.00 0.57 C ATOM 526 CD2 LEU 38 -0.177 67.209 -30.475 1.00 0.57 C ATOM 534 CA ARG 39 2.248 73.494 -28.352 1.00 0.57 C ATOM 535 N ARG 39 1.415 72.337 -28.422 1.00 0.57 N ATOM 538 C ARG 39 1.573 74.662 -27.564 1.00 0.57 C ATOM 539 O ARG 39 0.472 75.092 -27.959 1.00 0.57 O ATOM 540 CB ARG 39 2.655 73.967 -29.805 1.00 0.57 C ATOM 543 CG ARG 39 4.206 73.937 -30.006 1.00 0.57 C ATOM 546 CD ARG 39 4.622 74.144 -31.498 1.00 0.57 C ATOM 549 NE ARG 39 4.190 73.097 -32.343 1.00 0.57 N ATOM 551 CZ ARG 39 4.767 71.824 -32.363 1.00 0.57 C ATOM 552 NH1 ARG 39 4.411 70.981 -33.299 1.00 0.57 H ATOM 553 NH2 ARG 39 5.663 71.442 -31.483 1.00 0.57 H ATOM 558 CA ASP 40 1.586 75.932 -25.507 1.00 0.57 C ATOM 559 N ASP 40 2.218 75.164 -26.532 1.00 0.57 N ATOM 562 C ASP 40 1.111 77.366 -25.926 1.00 0.57 C ATOM 563 O ASP 40 0.322 77.422 -26.891 1.00 0.57 O ATOM 564 CB ASP 40 2.561 75.933 -24.280 1.00 0.57 C ATOM 567 CG ASP 40 1.922 76.482 -22.990 1.00 0.57 C ATOM 568 OD1 ASP 40 0.848 75.990 -22.555 1.00 0.57 O ATOM 569 OD2 ASP 40 2.488 77.412 -22.358 1.00 0.57 O ATOM 570 CA ASP 41 0.733 79.668 -25.299 1.00 0.57 C ATOM 571 N ASP 41 1.483 78.446 -25.251 1.00 0.57 N ATOM 574 C ASP 41 1.518 80.936 -25.756 1.00 0.57 C ATOM 575 O ASP 41 2.757 80.892 -25.722 1.00 0.57 O ATOM 576 CB ASP 41 0.020 79.888 -23.921 1.00 0.57 C ATOM 579 CG ASP 41 0.993 80.309 -22.797 1.00 0.57 C ATOM 580 OD1 ASP 41 1.064 79.631 -21.739 1.00 0.57 O ATOM 581 OD2 ASP 41 1.690 81.350 -22.916 1.00 0.57 O ATOM 582 CA GLY 42 1.553 83.150 -26.636 1.00 0.57 C ATOM 583 N GLY 42 0.865 81.990 -26.208 1.00 0.57 N ATOM 587 C GLY 42 0.649 84.368 -26.978 1.00 0.57 C ATOM 588 O GLY 42 1.026 85.461 -26.527 1.00 0.57 O ATOM 589 N TYR 43 -0.438 84.261 -27.715 1.00 1.20 N ATOM 590 CA TYR 43 -1.150 85.433 -28.122 1.00 0.69 C ATOM 591 C TYR 43 -2.117 85.981 -27.045 1.00 0.67 C ATOM 592 O TYR 43 -2.316 87.209 -27.004 1.00 0.70 O ATOM 593 CB TYR 43 -1.974 85.297 -29.443 1.00 0.64 C ATOM 594 CG TYR 43 -1.140 85.237 -30.708 1.00 0.44 C ATOM 595 CD1 TYR 43 -0.353 86.329 -31.117 1.00 0.56 C ATOM 596 CD2 TYR 43 -1.233 84.109 -31.528 1.00 0.36 C ATOM 597 CE1 TYR 43 0.325 86.290 -32.344 1.00 0.76 C ATOM 598 CE2 TYR 43 -0.601 84.097 -32.771 1.00 0.65 C ATOM 599 CZ TYR 43 0.190 85.174 -33.180 1.00 0.88 C ATOM 608 OH TYR 43 0.779 85.125 -34.357 1.00 0.57 H ATOM 610 N LYS 44 -2.698 85.136 -26.265 1.00 0.60 N ATOM 611 CA LYS 44 -3.718 85.518 -25.363 1.00 0.54 C ATOM 612 C LYS 44 -5.059 85.861 -26.086 1.00 0.39 C ATOM 613 O LYS 44 -5.064 85.947 -27.330 1.00 0.61 O ATOM 616 CB LYS 44 -3.308 86.600 -24.281 1.00 0.57 C ATOM 619 CG LYS 44 -2.058 86.199 -23.419 1.00 0.57 C ATOM 622 CD LYS 44 -0.750 86.845 -23.964 1.00 0.57 C ATOM 625 CE LYS 44 0.513 86.487 -23.130 1.00 0.57 C ATOM 628 NZ LYS 44 1.745 87.139 -23.766 1.00 0.57 N ATOM 632 N GLY 45 -6.140 85.993 -25.351 1.00 0.37 N ATOM 633 CA GLY 45 -7.407 86.353 -25.889 1.00 0.46 C ATOM 634 C GLY 45 -7.926 87.627 -25.203 1.00 0.38 C ATOM 635 O GLY 45 -7.391 87.999 -24.156 1.00 0.41 O ATOM 639 N PRO 46 -8.951 88.330 -25.708 1.00 0.34 N ATOM 640 CA PRO 46 -9.761 87.942 -26.897 1.00 0.28 C ATOM 641 C PRO 46 -9.070 88.205 -28.266 1.00 0.27 C ATOM 642 O PRO 46 -8.473 89.284 -28.455 1.00 0.51 O ATOM 643 CB PRO 46 -11.037 88.830 -26.795 1.00 0.22 C ATOM 644 CG PRO 46 -10.625 90.058 -25.955 1.00 0.44 C ATOM 645 CD PRO 46 -9.541 89.495 -25.010 1.00 0.42 C ATOM 653 N LEU 47 -9.200 87.293 -29.192 1.00 0.30 N ATOM 654 CA LEU 47 -8.459 87.350 -30.410 1.00 0.26 C ATOM 655 C LEU 47 -9.372 87.125 -31.638 1.00 0.17 C ATOM 656 O LEU 47 -10.062 86.085 -31.695 1.00 0.16 O ATOM 657 CB LEU 47 -7.345 86.264 -30.331 1.00 0.36 C ATOM 658 CG LEU 47 -6.760 85.780 -31.699 1.00 0.46 C ATOM 659 CD1 LEU 47 -5.939 86.922 -32.341 1.00 1.27 C ATOM 660 CD2 LEU 47 -5.861 84.522 -31.519 1.00 0.35 C ATOM 672 N LEU 48 -9.341 88.008 -32.592 1.00 0.21 N ATOM 673 CA LEU 48 -9.835 87.719 -33.888 1.00 0.12 C ATOM 674 C LEU 48 -8.882 86.783 -34.657 1.00 0.05 C ATOM 675 O LEU 48 -7.682 87.103 -34.727 1.00 0.14 O ATOM 676 CB LEU 48 -10.086 89.054 -34.651 1.00 0.15 C ATOM 677 CG LEU 48 -11.435 89.702 -34.159 1.00 0.23 C ATOM 678 CD1 LEU 48 -12.555 89.539 -35.228 1.00 0.28 C ATOM 679 CD2 LEU 48 -11.237 91.182 -33.704 1.00 0.56 C ATOM 691 N LEU 49 -9.352 85.707 -35.218 1.00 0.15 N ATOM 692 CA LEU 49 -8.550 84.911 -36.083 1.00 0.12 C ATOM 693 C LEU 49 -9.220 84.918 -37.474 1.00 0.19 C ATOM 694 O LEU 49 -10.350 84.403 -37.569 1.00 0.44 O ATOM 695 CB LEU 49 -8.440 83.491 -35.435 1.00 0.37 C ATOM 696 CG LEU 49 -7.566 82.429 -36.176 1.00 0.55 C ATOM 701 CD1 LEU 49 -8.184 82.028 -37.539 1.00 0.57 C ATOM 702 CD2 LEU 49 -6.074 82.877 -36.316 1.00 0.57 C ATOM 710 N ARG 50 -8.576 85.492 -38.465 1.00 0.19 N ATOM 711 CA ARG 50 -8.995 85.443 -39.824 1.00 0.20 C ATOM 712 C ARG 50 -8.379 84.221 -40.542 1.00 0.39 C ATOM 713 O ARG 50 -7.148 84.047 -40.411 1.00 0.55 O ATOM 714 CB ARG 50 -8.457 86.697 -40.603 1.00 0.34 C ATOM 715 CG ARG 50 -9.043 88.058 -40.137 1.00 0.47 C ATOM 722 CD ARG 50 -8.452 89.349 -40.813 1.00 0.57 C ATOM 725 NE ARG 50 -7.048 89.369 -40.925 1.00 0.57 N ATOM 727 CZ ARG 50 -6.460 89.437 -42.187 1.00 0.57 C ATOM 728 NH1 ARG 50 -6.871 88.675 -43.173 1.00 0.57 H ATOM 729 NH2 ARG 50 -5.472 90.274 -42.392 1.00 0.57 H ATOM 734 N PHE 51 -9.133 83.436 -41.293 1.00 0.37 N ATOM 735 CA PHE 51 -8.522 82.569 -42.246 1.00 0.15 C ATOM 736 C PHE 51 -8.313 83.231 -43.630 1.00 0.12 C ATOM 737 O PHE 51 -9.268 83.316 -44.421 1.00 0.35 O ATOM 738 CB PHE 51 -9.186 81.192 -42.567 1.00 0.52 C ATOM 743 CG PHE 51 -8.161 80.253 -43.284 1.00 0.57 C ATOM 744 CD1 PHE 51 -8.672 79.193 -44.036 1.00 0.57 C ATOM 745 CD2 PHE 51 -6.742 80.350 -43.206 1.00 0.57 C ATOM 746 CE1 PHE 51 -7.823 78.203 -44.563 1.00 0.57 C ATOM 747 CE2 PHE 51 -5.896 79.413 -43.806 1.00 0.57 C ATOM 748 CZ PHE 51 -6.439 78.323 -44.471 1.00 0.57 C ATOM 5187 N ALA 330 -13.434 85.324 -40.331 1.00 0.45 N ATOM 5188 CA ALA 330 -13.050 85.484 -38.979 1.00 0.37 C ATOM 5189 C ALA 330 -13.922 84.836 -37.916 1.00 0.09 C ATOM 5190 O ALA 330 -15.167 84.737 -38.032 1.00 0.29 O ATOM 5193 CB ALA 330 -12.508 86.826 -38.434 1.00 0.57 C ATOM 5197 N VAL 331 -13.219 84.432 -36.919 1.00 0.09 N ATOM 5198 CA VAL 331 -13.732 83.919 -35.738 1.00 0.12 C ATOM 5199 C VAL 331 -13.209 84.768 -34.571 1.00 0.15 C ATOM 5200 O VAL 331 -12.008 85.105 -34.580 1.00 0.08 O ATOM 5201 CB VAL 331 -13.204 82.448 -35.665 1.00 0.15 C ATOM 5205 CG1 VAL 331 -12.897 82.009 -34.194 1.00 0.57 C ATOM 5206 CG2 VAL 331 -14.159 81.444 -36.379 1.00 0.57 C ATOM 5213 N LEU 332 -14.022 85.000 -33.600 1.00 0.24 N ATOM 5214 CA LEU 332 -13.555 85.601 -32.399 1.00 0.12 C ATOM 5215 C LEU 332 -13.359 84.541 -31.303 1.00 0.17 C ATOM 5216 O LEU 332 -14.353 83.923 -30.876 1.00 0.14 O ATOM 5217 CB LEU 332 -14.537 86.710 -31.959 1.00 0.09 C ATOM 5218 CG LEU 332 -14.122 87.618 -30.740 1.00 0.18 C ATOM 5219 CD1 LEU 332 -12.597 87.758 -30.463 1.00 0.53 C ATOM 5220 CD2 LEU 332 -14.710 89.047 -30.960 1.00 0.89 C ATOM 5232 N ILE 333 -12.140 84.341 -30.904 1.00 0.34 N ATOM 5233 CA ILE 333 -11.770 83.480 -29.838 1.00 0.44 C ATOM 5234 C ILE 333 -11.827 84.246 -28.510 1.00 0.40 C ATOM 5235 O ILE 333 -11.172 85.304 -28.413 1.00 0.45 O ATOM 5236 CB ILE 333 -10.303 82.964 -30.123 1.00 0.64 C ATOM 5237 CG1 ILE 333 -10.127 81.787 -31.149 1.00 0.50 C ATOM 5238 CD1 ILE 333 -8.819 81.875 -31.998 1.00 1.04 C ATOM 5244 CG2 ILE 333 -9.341 82.979 -28.927 1.00 0.57 C ATOM 5251 N ALA 334 -12.516 83.719 -27.543 1.00 0.43 N ATOM 5252 CA ALA 334 -12.585 84.322 -26.263 1.00 0.48 C ATOM 5253 C ALA 334 -12.553 83.240 -25.145 1.00 0.40 C ATOM 5254 O ALA 334 -13.369 82.306 -25.157 1.00 0.26 O ATOM 5257 CB ALA 334 -13.883 85.141 -26.223 1.00 0.57 C ATOM 5261 N PRO 335 -11.605 83.314 -24.196 1.00 0.56 N ATOM 5262 CA PRO 335 -11.614 82.577 -22.917 1.00 0.21 C ATOM 5263 C PRO 335 -12.792 82.797 -21.957 1.00 0.27 C ATOM 5264 O PRO 335 -13.213 83.957 -21.780 1.00 0.43 O ATOM 5265 CB PRO 335 -10.280 82.922 -22.221 1.00 0.13 C ATOM 5266 CG PRO 335 -9.295 83.073 -23.405 1.00 2.82 C ATOM 5267 CD PRO 335 -10.195 83.430 -24.619 1.00 4.63 C ATOM 5275 N VAL 336 -13.264 81.724 -21.381 1.00 0.26 N ATOM 5276 CA VAL 336 -14.190 81.723 -20.305 1.00 0.26 C ATOM 5277 C VAL 336 -13.482 82.046 -18.988 1.00 0.29 C ATOM 5278 O VAL 336 -12.501 81.351 -18.654 1.00 0.44 O ATOM 5279 CB VAL 336 -14.891 80.336 -20.157 1.00 0.19 C ATOM 5280 CG1 VAL 336 -15.936 80.323 -18.997 1.00 0.24 C ATOM 5281 CG2 VAL 336 -15.592 79.939 -21.496 1.00 0.27 C ATOM 5291 N LEU 337 -14.008 82.977 -18.253 1.00 0.25 N ATOM 5292 CA LEU 337 -13.528 83.290 -16.967 1.00 0.32 C ATOM 5293 C LEU 337 -14.464 82.647 -15.920 1.00 0.54 C ATOM 5294 O LEU 337 -13.948 81.864 -15.101 1.00 1.09 O ATOM 5295 CB LEU 337 -13.403 84.839 -16.781 1.00 0.49 C ATOM 5296 CG LEU 337 -12.026 85.394 -17.273 1.00 0.37 C ATOM 5297 CD2 LEU 337 -11.990 85.467 -18.826 1.00 0.27 C ATOM 5302 CD1 LEU 337 -11.754 86.770 -16.618 1.00 0.57 C ATOM 5310 N GLU 338 -15.739 82.925 -15.935 1.00 0.20 N ATOM 5311 CA GLU 338 -16.595 82.438 -14.904 1.00 0.26 C ATOM 5312 C GLU 338 -17.845 81.723 -15.463 1.00 0.27 C ATOM 5313 O GLU 338 -18.285 82.042 -16.589 1.00 0.23 O ATOM 5314 CB GLU 338 -17.126 83.573 -13.979 1.00 0.35 C ATOM 5315 CG GLU 338 -16.010 84.429 -13.292 1.00 0.34 C ATOM 5316 OE2 GLU 338 -14.643 86.403 -13.637 1.00 0.83 O ATOM 5323 CD GLU 338 -15.528 85.644 -14.115 1.00 0.57 C ATOM 5324 OE1 GLU 338 -16.011 85.891 -15.250 1.00 0.57 O ATOM 5325 N LEU 339 -18.392 80.829 -14.684 1.00 0.28 N ATOM 5326 CA LEU 339 -19.623 80.182 -14.950 1.00 0.22 C ATOM 5327 C LEU 339 -20.572 80.568 -13.771 1.00 0.23 C ATOM 5328 O LEU 339 -20.178 80.349 -12.607 1.00 0.45 O ATOM 5329 CB LEU 339 -19.461 78.635 -14.873 1.00 0.17 C ATOM 5330 CG LEU 339 -18.506 77.883 -15.855 1.00 0.52 C ATOM 5331 CD1 LEU 339 -18.216 76.472 -15.243 1.00 0.91 C ATOM 5336 CD2 LEU 339 -17.155 78.594 -16.167 1.00 0.57 C ATOM 5344 N PHE 340 -21.733 81.102 -14.037 1.00 0.07 N ATOM 5345 CA PHE 340 -22.584 81.617 -13.015 1.00 0.10 C ATOM 5346 C PHE 340 -24.037 81.130 -13.189 1.00 0.18 C ATOM 5347 O PHE 340 -24.563 81.280 -14.307 1.00 0.38 O ATOM 5348 CB PHE 340 -22.484 83.171 -13.102 1.00 0.26 C ATOM 5349 CG PHE 340 -23.491 83.939 -12.252 1.00 0.34 C ATOM 5354 CD1 PHE 340 -23.586 83.703 -10.870 1.00 0.57 C ATOM 5355 CD2 PHE 340 -24.303 84.928 -12.837 1.00 0.57 C ATOM 5356 CE1 PHE 340 -24.486 84.438 -10.086 1.00 0.57 C ATOM 5357 CE2 PHE 340 -25.185 85.675 -12.049 1.00 0.57 C ATOM 5358 CZ PHE 340 -25.282 85.426 -10.675 1.00 0.57 C ATOM 5364 N SER 341 -24.669 80.621 -12.164 1.00 0.55 N ATOM 5365 CA SER 341 -25.985 80.097 -12.278 1.00 0.56 C ATOM 5366 C SER 341 -27.006 81.041 -11.615 1.00 0.56 C ATOM 5367 O SER 341 -26.819 81.409 -10.441 1.00 0.47 O ATOM 5368 CB SER 341 -26.054 78.689 -11.623 1.00 0.49 C ATOM 5373 OG SER 341 -25.050 77.767 -12.261 1.00 0.57 O ATOM 5375 N GLN 342 -28.042 81.380 -12.325 1.00 0.60 N ATOM 5376 CA GLN 342 -29.146 82.080 -11.780 1.00 0.49 C ATOM 5377 C GLN 342 -30.393 81.180 -11.826 1.00 0.36 C ATOM 5378 O GLN 342 -30.362 80.146 -12.533 1.00 0.38 O ATOM 5379 CB GLN 342 -29.433 83.370 -12.615 1.00 0.48 C ATOM 5384 CG GLN 342 -28.264 84.398 -12.520 1.00 0.57 C ATOM 5387 CD GLN 342 -28.618 85.703 -13.259 1.00 0.57 C ATOM 5388 OE1 GLN 342 -29.568 86.362 -12.906 1.00 0.57 O ATOM 5389 NE2 GLN 342 -27.845 86.132 -14.322 1.00 0.57 N ATOM 6841 CA THR 531 2.621 92.695 -25.352 1.00 0.57 C ATOM 6842 N THR 531 3.870 92.754 -24.718 1.00 0.57 N ATOM 6845 C THR 531 1.817 91.528 -24.736 1.00 0.57 C ATOM 6846 O THR 531 2.343 90.398 -24.703 1.00 0.57 O ATOM 6847 CB THR 531 2.793 92.487 -26.895 1.00 0.57 C ATOM 6849 OG1 THR 531 3.863 93.404 -27.429 1.00 0.57 O ATOM 6851 CG2 THR 531 1.466 92.790 -27.656 1.00 0.57 C ATOM 6855 CA HIS 532 -0.231 90.772 -23.762 1.00 0.57 C ATOM 6856 N HIS 532 0.613 91.777 -24.300 1.00 0.57 N ATOM 6859 C HIS 532 -1.565 90.786 -24.557 1.00 0.57 C ATOM 6860 O HIS 532 -2.523 91.378 -24.051 1.00 0.57 O ATOM 6861 CB HIS 532 -0.481 91.099 -22.254 1.00 0.57 C ATOM 6864 CG HIS 532 0.836 91.057 -21.462 1.00 0.57 C ATOM 6865 ND1 HIS 532 1.672 89.895 -21.288 1.00 0.57 N ATOM 6866 CD2 HIS 532 1.432 92.104 -20.805 1.00 0.57 C ATOM 6867 CE1 HIS 532 2.709 90.259 -20.559 1.00 0.57 C ATOM 6868 NE2 HIS 532 2.679 91.673 -20.174 1.00 0.57 N ATOM 6872 CA PRO 533 -2.755 90.630 -26.746 1.00 0.57 C ATOM 6873 N PRO 533 -1.707 90.208 -25.771 1.00 0.57 N ATOM 6875 C PRO 533 -4.270 90.433 -26.392 1.00 0.57 C ATOM 6876 O PRO 533 -4.971 89.719 -27.135 1.00 0.57 O ATOM 6877 CB PRO 533 -2.361 89.975 -28.107 1.00 0.57 C ATOM 6880 CG PRO 533 -0.877 89.579 -27.996 1.00 0.57 C ATOM 6883 CD PRO 533 -0.607 89.497 -26.475 1.00 0.57 C ATOM 6886 CA THR 534 -6.128 90.965 -24.987 1.00 0.57 C ATOM 6887 N THR 534 -4.767 91.078 -25.361 1.00 0.57 N ATOM 6890 C THR 534 -7.136 91.727 -25.909 1.00 0.57 C ATOM 6891 O THR 534 -7.771 91.010 -26.702 1.00 0.57 O ATOM 6892 CB THR 534 -6.341 91.324 -23.478 1.00 0.57 C ATOM 6894 OG1 THR 534 -5.914 92.738 -23.189 1.00 0.57 O ATOM 6896 CG2 THR 534 -5.575 90.356 -22.524 1.00 0.57 C ATOM 6900 CA GLU 535 -8.530 93.636 -26.361 1.00 0.57 C ATOM 6901 N GLU 535 -7.358 93.038 -25.811 1.00 0.57 N ATOM 6904 C GLU 535 -8.262 94.421 -27.677 1.00 0.57 C ATOM 6905 O GLU 535 -7.362 95.309 -27.700 1.00 0.57 O ATOM 6906 CB GLU 535 -9.241 94.571 -25.318 1.00 0.57 C ATOM 6909 CG GLU 535 -10.719 94.917 -25.729 1.00 0.57 C ATOM 6912 CD GLU 535 -10.822 95.919 -26.899 1.00 0.57 C ATOM 6913 OE1 GLU 535 -10.282 97.053 -26.812 1.00 0.57 O ATOM 6914 OE2 GLU 535 -11.458 95.610 -27.941 1.00 0.57 O ATOM 6915 N ALA 536 -8.982 94.051 -28.735 1.00 0.81 N ATOM 6916 CA ALA 536 -8.514 92.867 -29.344 1.00 0.41 C ATOM 6917 C ALA 536 -7.582 93.026 -30.536 1.00 0.37 C ATOM 6918 O ALA 536 -7.380 94.154 -31.018 1.00 0.87 O ATOM 6919 CB ALA 536 -9.736 91.997 -29.735 1.00 0.47 C ATOM 6925 CA ILE 537 -6.245 91.867 -32.124 1.00 0.57 C ATOM 6926 N ILE 537 -7.018 91.925 -30.945 1.00 0.57 N ATOM 6929 C ILE 537 -6.954 90.993 -33.139 1.00 0.57 C ATOM 6930 O ILE 537 -7.903 90.256 -32.782 1.00 0.57 O ATOM 6931 CB ILE 537 -4.780 91.318 -31.914 1.00 0.57 C ATOM 6933 CG1 ILE 537 -4.618 89.754 -31.927 1.00 0.57 C ATOM 6936 CG2 ILE 537 -4.232 91.885 -30.589 1.00 0.57 C ATOM 6940 CD1 ILE 537 -3.134 89.266 -31.899 1.00 0.57 C ATOM 6944 CA ILE 538 -6.836 90.180 -35.356 1.00 0.57 C ATOM 6945 N ILE 538 -6.461 91.058 -34.333 1.00 0.57 N ATOM 6948 C ILE 538 -5.614 89.439 -35.928 1.00 0.57 C ATOM 6949 O ILE 538 -4.691 90.114 -36.414 1.00 0.57 O ATOM 6950 CB ILE 538 -7.750 90.952 -36.375 1.00 0.57 C ATOM 6952 CG1 ILE 538 -8.396 89.944 -37.356 1.00 0.57 C ATOM 6955 CG2 ILE 538 -7.123 92.113 -37.207 1.00 0.57 C ATOM 6959 CD1 ILE 538 -9.827 90.422 -37.733 1.00 0.57 C ATOM 6963 CA SER 539 -4.587 87.348 -36.447 1.00 0.57 C ATOM 6964 N SER 539 -5.596 88.134 -35.863 1.00 0.57 N ATOM 6967 C SER 539 -5.034 86.798 -37.830 1.00 0.57 C ATOM 6968 O SER 539 -6.243 86.796 -38.161 1.00 0.57 O ATOM 6969 CB SER 539 -4.215 86.160 -35.506 1.00 0.57 C ATOM 6972 OG SER 539 -3.164 85.270 -36.114 1.00 0.57 O ATOM 6974 CA ILE 540 -4.207 85.697 -39.811 1.00 0.57 C ATOM 6975 N ILE 540 -4.065 86.368 -38.580 1.00 0.57 N ATOM 6978 C ILE 540 -3.783 84.259 -39.495 1.00 0.57 C ATOM 6979 O ILE 540 -2.744 84.107 -38.820 1.00 0.57 O ATOM 6980 CB ILE 540 -3.252 86.350 -40.908 1.00 0.57 C ATOM 6982 CG1 ILE 540 -4.140 87.081 -41.967 1.00 0.57 C ATOM 6985 CG2 ILE 540 -2.251 85.343 -41.584 1.00 0.57 C ATOM 6989 CD1 ILE 540 -3.416 87.690 -43.207 1.00 0.57 C ATOM 6993 N ASN 541 -4.506 83.276 -39.949 1.00 0.36 N ATOM 6994 CA ASN 541 -4.103 81.931 -39.748 1.00 0.69 C ATOM 6995 C ASN 541 -3.331 81.306 -40.917 1.00 1.19 C ATOM 6996 O ASN 541 -3.762 81.492 -42.067 1.00 1.27 O ATOM 6997 CB ASN 541 -5.305 81.002 -39.510 1.00 0.51 C ATOM 7002 CG ASN 541 -4.971 79.789 -38.613 1.00 0.57 C ATOM 7003 OD1 ASN 541 -3.828 79.511 -38.338 1.00 0.57 O ATOM 7004 ND2 ASN 541 -5.988 79.023 -38.089 1.00 0.57 N ATOM 7007 CA GLU 542 -1.599 79.645 -41.422 1.00 0.57 C ATOM 7008 N GLU 542 -2.336 80.532 -40.587 1.00 0.57 N ATOM 7011 C GLU 542 -1.484 79.856 -42.953 1.00 0.57 C ATOM 7012 O GLU 542 -2.047 80.816 -43.523 1.00 0.57 O ATOM 7013 CB GLU 542 -1.932 78.150 -41.089 1.00 0.57 C ATOM 7016 CG GLU 542 -0.725 77.150 -41.293 1.00 0.57 C ATOM 7019 CD GLU 542 -0.796 76.246 -42.551 1.00 0.57 C ATOM 7020 OE1 GLU 542 0.100 75.384 -42.745 1.00 0.57 O ATOM 7021 OE2 GLU 542 -1.736 76.363 -43.383 1.00 0.57 O ATOM 7022 N LYS 543 -0.614 79.104 -43.556 1.00 1.72 N ATOM 7023 CA LYS 543 0.262 79.692 -44.479 1.00 1.85 C ATOM 7024 C LYS 543 1.045 80.862 -43.731 1.00 2.56 C ATOM 7025 O LYS 543 2.290 80.836 -43.779 1.00 3.24 O ATOM 7026 CB LYS 543 -0.403 79.902 -45.895 1.00 2.25 C ATOM 7027 CG LYS 543 -1.297 78.665 -46.292 1.00 1.88 C ATOM 7028 CD LYS 543 -1.678 78.616 -47.809 1.00 1.86 C ATOM 7029 CE LYS 543 -2.559 77.371 -48.161 1.00 1.70 C ATOM 7030 NZ LYS 543 -3.972 77.488 -47.580 1.00 1.45 N ATOM 7044 N GLY 544 0.379 81.751 -42.999 1.00 2.88 N ATOM 7045 CA GLY 544 0.929 82.431 -41.852 1.00 3.88 C ATOM 7046 C GLY 544 1.437 81.525 -40.664 1.00 3.13 C ATOM 7047 O GLY 544 2.395 80.787 -41.107 1.00 2.43 O ATOM 7051 N TYR 545 0.856 81.607 -39.313 1.00 0.42 N ATOM 7052 CA TYR 545 0.009 82.675 -38.825 1.00 0.57 C ATOM 7053 C TYR 545 0.632 84.135 -38.688 1.00 0.72 C ATOM 7054 O TYR 545 1.872 84.224 -38.674 1.00 1.27 O ATOM 7055 CB TYR 545 -0.541 82.238 -37.401 1.00 0.62 C ATOM 7060 CG TYR 545 0.491 81.897 -36.317 1.00 0.57 C ATOM 7061 CD1 TYR 545 -0.011 81.509 -35.067 1.00 0.57 C ATOM 7062 CD2 TYR 545 1.891 81.940 -36.491 1.00 0.57 C ATOM 7065 CE1 TYR 545 0.854 81.219 -34.002 1.00 0.57 C ATOM 7066 CE2 TYR 545 2.755 81.622 -35.435 1.00 0.57 C ATOM 7069 CZ TYR 545 2.237 81.269 -34.186 1.00 0.57 C ATOM 7070 OH TYR 545 3.039 80.983 -33.198 1.00 0.57 H ATOM 7072 N GLU 546 -0.157 85.215 -38.581 1.00 0.46 N ATOM 7073 CA GLU 546 0.350 86.585 -38.599 1.00 0.62 C ATOM 7074 C GLU 546 -0.693 87.778 -38.230 1.00 1.05 C ATOM 7075 O GLU 546 -1.759 87.414 -37.715 1.00 0.45 O ATOM 7076 CB GLU 546 0.915 86.979 -40.021 1.00 0.40 C ATOM 7077 CG GLU 546 1.863 86.024 -40.813 1.00 0.32 C ATOM 7084 CD GLU 546 2.236 86.563 -42.212 1.00 0.57 C ATOM 7085 OE1 GLU 546 1.806 87.677 -42.610 1.00 0.57 O ATOM 7086 OE2 GLU 546 2.973 85.873 -42.966 1.00 0.57 O ATOM 7087 N VAL 547 -0.426 89.085 -38.488 1.00 2.25 N ATOM 7088 CA VAL 547 -1.273 90.296 -38.372 1.00 1.42 C ATOM 7089 C VAL 547 -1.391 91.070 -36.977 1.00 2.14 C ATOM 7090 O VAL 547 -0.342 91.223 -36.319 1.00 4.04 O ATOM 7091 CB VAL 547 -2.475 90.559 -39.401 1.00 0.69 C ATOM 7092 CG1 VAL 547 -3.809 89.817 -39.157 1.00 0.83 C ATOM 7093 CG2 VAL 547 -1.966 90.327 -40.862 1.00 0.81 C ATOM 7103 N GLU 548 -2.559 91.645 -36.608 1.00 1.10 N ATOM 7104 CA GLU 548 -2.705 92.888 -35.873 1.00 1.23 C ATOM 7105 C GLU 548 -2.217 92.881 -34.364 1.00 1.09 C ATOM 7106 O GLU 548 -1.855 91.803 -33.864 1.00 1.60 O ATOM 7107 CB GLU 548 -4.225 93.325 -35.974 1.00 1.09 C ATOM 7108 CG GLU 548 -4.722 94.426 -34.982 1.00 1.11 C ATOM 7109 CD GLU 548 -6.146 94.958 -35.217 1.00 1.14 C ATOM 7116 OE1 GLU 548 -6.399 95.662 -36.228 1.00 0.57 O ATOM 7117 OE2 GLU 548 -7.063 94.698 -34.393 1.00 0.57 O ATOM 7118 N GLY 549 -2.216 94.028 -33.691 1.00 0.60 N ATOM 7119 CA GLY 549 -1.929 94.170 -32.297 1.00 0.37 C ATOM 7120 C GLY 549 -3.098 94.780 -31.438 1.00 0.34 C ATOM 7121 O GLY 549 -4.213 94.957 -31.966 1.00 1.00 O ATOM 7125 N ILE 550 -2.850 95.076 -30.177 1.00 0.58 N ATOM 7126 CA ILE 550 -3.862 95.136 -29.160 1.00 0.17 C ATOM 7127 C ILE 550 -3.949 96.558 -28.500 1.00 0.41 C ATOM 7128 O ILE 550 -2.933 97.283 -28.479 1.00 0.68 O ATOM 7129 CB ILE 550 -3.454 94.096 -28.042 1.00 0.73 C ATOM 7133 CG1 ILE 550 -4.501 93.997 -26.871 1.00 0.57 C ATOM 7136 CG2 ILE 550 -1.975 94.363 -27.539 1.00 0.57 C ATOM 7140 CD1 ILE 550 -3.987 94.275 -25.427 1.00 0.57 C ATOM 7144 CA ILE 551 -5.195 98.108 -27.175 1.00 0.57 C ATOM 7145 N ILE 551 -5.086 96.935 -27.968 1.00 0.57 N ATOM 7148 C ILE 551 -4.564 97.845 -25.769 1.00 0.57 C ATOM 7149 O ILE 551 -5.163 97.065 -24.998 1.00 0.57 O ATOM 7150 CB ILE 551 -6.716 98.538 -27.038 1.00 0.57 C ATOM 7152 CG1 ILE 551 -7.328 99.090 -28.383 1.00 0.57 C ATOM 7155 CG2 ILE 551 -6.924 99.644 -25.944 1.00 0.57 C ATOM 7159 CD1 ILE 551 -7.544 98.032 -29.507 1.00 0.57 C ATOM 7163 N GLU 552 -3.426 98.428 -25.459 1.00 0.50 N ATOM 7164 CA GLU 552 -2.947 98.460 -24.113 1.00 0.39 C ATOM 7165 C GLU 552 -3.798 99.385 -23.213 1.00 0.47 C ATOM 7166 O GLU 552 -4.269 100.460 -23.670 1.00 0.14 O ATOM 7167 CB GLU 552 -1.445 98.921 -23.976 1.00 0.50 C ATOM 7172 CG GLU 552 -0.451 98.023 -24.787 1.00 0.57 C ATOM 7175 CD GLU 552 -0.247 96.619 -24.177 1.00 0.57 C ATOM 7176 OE1 GLU 552 -1.190 95.786 -24.163 1.00 0.57 O ATOM 7177 OE2 GLU 552 0.875 96.297 -23.705 1.00 0.57 O ATOM 7178 CA ALA 553 -4.247 99.973 -20.970 1.00 0.57 C ATOM 7179 N ALA 553 -3.913 99.031 -21.968 1.00 0.57 N ATOM 7182 C ALA 553 -3.335 101.232 -21.045 1.00 0.57 C ATOM 7183 O ALA 553 -2.249 101.235 -20.434 1.00 0.57 O ATOM 7184 CB ALA 553 -4.201 99.310 -19.560 1.00 0.57 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.40 51.7 89 24.5 364 ARMSMC SECONDARY STRUCTURE . . 61.11 60.0 40 35.7 112 ARMSMC SURFACE . . . . . . . . 72.63 46.9 49 25.0 196 ARMSMC BURIED . . . . . . . . 69.87 57.5 40 23.8 168 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.59 40.0 40 24.4 164 ARMSSC1 RELIABLE SIDE CHAINS . 85.44 42.1 38 24.8 153 ARMSSC1 SECONDARY STRUCTURE . . 95.77 35.0 20 38.5 52 ARMSSC1 SURFACE . . . . . . . . 79.17 50.0 24 26.4 91 ARMSSC1 BURIED . . . . . . . . 101.08 25.0 16 21.9 73 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.13 51.4 37 26.8 138 ARMSSC2 RELIABLE SIDE CHAINS . 55.40 58.6 29 26.9 108 ARMSSC2 SECONDARY STRUCTURE . . 81.44 47.1 17 39.5 43 ARMSSC2 SURFACE . . . . . . . . 60.35 54.2 24 29.6 81 ARMSSC2 BURIED . . . . . . . . 87.60 46.2 13 22.8 57 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.17 36.4 11 17.2 64 ARMSSC3 RELIABLE SIDE CHAINS . 96.17 36.4 11 19.6 56 ARMSSC3 SECONDARY STRUCTURE . . 106.14 25.0 4 25.0 16 ARMSSC3 SURFACE . . . . . . . . 89.68 40.0 10 22.2 45 ARMSSC3 BURIED . . . . . . . . 145.99 0.0 1 5.3 19 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 121.70 12.5 8 50.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 121.70 12.5 8 50.0 16 ARMSSC4 SECONDARY STRUCTURE . . 108.46 33.3 3 75.0 4 ARMSSC4 SURFACE . . . . . . . . 128.10 14.3 7 53.8 13 ARMSSC4 BURIED . . . . . . . . 60.06 0.0 1 33.3 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.87 (Number of atoms: 81) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.87 81 44.3 183 CRMSCA CRN = ALL/NP . . . . . 0.0725 CRMSCA SECONDARY STRUCTURE . . 5.35 44 78.6 56 CRMSCA SURFACE . . . . . . . . 6.11 46 46.5 99 CRMSCA BURIED . . . . . . . . 5.54 35 41.7 84 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.95 399 44.2 903 CRMSMC SECONDARY STRUCTURE . . 5.52 219 78.8 278 CRMSMC SURFACE . . . . . . . . 6.24 228 46.5 490 CRMSMC BURIED . . . . . . . . 5.54 171 41.4 413 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.68 320 42.2 758 CRMSSC RELIABLE SIDE CHAINS . 7.52 280 42.4 660 CRMSSC SECONDARY STRUCTURE . . 7.18 177 76.0 233 CRMSSC SURFACE . . . . . . . . 7.60 204 47.0 434 CRMSSC BURIED . . . . . . . . 7.83 116 35.8 324 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.81 644 43.2 1490 CRMSALL SECONDARY STRUCTURE . . 6.36 353 77.2 457 CRMSALL SURFACE . . . . . . . . 6.96 388 46.7 830 CRMSALL BURIED . . . . . . . . 6.58 256 38.8 660 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.533 0.789 0.395 81 44.3 183 ERRCA SECONDARY STRUCTURE . . 4.108 0.805 0.402 44 78.6 56 ERRCA SURFACE . . . . . . . . 4.828 0.793 0.396 46 46.5 99 ERRCA BURIED . . . . . . . . 4.145 0.784 0.392 35 41.7 84 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.506 0.762 0.382 399 44.2 903 ERRMC SECONDARY STRUCTURE . . 4.130 0.773 0.387 219 78.8 278 ERRMC SURFACE . . . . . . . . 4.848 0.767 0.383 228 46.5 490 ERRMC BURIED . . . . . . . . 4.049 0.754 0.379 171 41.4 413 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.980 0.782 0.392 320 42.2 758 ERRSC RELIABLE SIDE CHAINS . 5.923 0.786 0.394 280 42.4 660 ERRSC SECONDARY STRUCTURE . . 5.344 0.765 0.383 177 76.0 233 ERRSC SURFACE . . . . . . . . 6.048 0.784 0.393 204 47.0 434 ERRSC BURIED . . . . . . . . 5.858 0.778 0.389 116 35.8 324 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.177 0.768 0.385 644 43.2 1490 ERRALL SECONDARY STRUCTURE . . 4.693 0.766 0.383 353 77.2 457 ERRALL SURFACE . . . . . . . . 5.445 0.775 0.388 388 46.7 830 ERRALL BURIED . . . . . . . . 4.770 0.758 0.381 256 38.8 660 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 14 24 42 76 81 183 DISTCA CA (P) 1.09 7.65 13.11 22.95 41.53 183 DISTCA CA (RMS) 0.97 1.53 2.04 2.97 5.07 DISTCA ALL (N) 7 85 162 314 571 644 1490 DISTALL ALL (P) 0.47 5.70 10.87 21.07 38.32 1490 DISTALL ALL (RMS) 0.80 1.56 2.07 3.13 5.39 DISTALL END of the results output