####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS429_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS429_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 576 - 606 4.86 9.89 LONGEST_CONTINUOUS_SEGMENT: 31 577 - 607 4.83 10.24 LCS_AVERAGE: 52.52 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 567 - 580 1.47 14.76 LONGEST_CONTINUOUS_SEGMENT: 14 584 - 597 1.97 13.07 LCS_AVERAGE: 20.41 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 585 - 595 0.93 15.54 LCS_AVERAGE: 14.00 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 9 11 28 6 8 8 9 9 10 13 15 18 20 22 22 26 28 33 38 39 41 47 48 LCS_GDT S 555 S 555 9 11 28 6 8 8 9 9 10 13 15 18 20 22 22 26 27 28 30 38 40 47 48 LCS_GDT I 556 I 556 9 11 28 6 8 8 9 9 10 13 15 18 20 22 22 26 27 28 33 34 38 40 44 LCS_GDT L 557 L 557 9 11 28 6 8 8 9 9 10 11 15 18 20 22 23 28 32 35 38 39 41 47 48 LCS_GDT D 558 D 558 9 11 28 6 8 8 9 9 10 13 15 18 20 22 25 28 32 35 38 39 41 47 48 LCS_GDT T 559 T 559 9 11 28 6 8 8 9 9 10 13 15 18 20 22 22 26 27 28 33 38 40 45 48 LCS_GDT L 560 L 560 9 11 28 6 8 8 9 9 10 13 15 18 20 22 22 26 27 31 38 39 41 47 48 LCS_GDT E 561 E 561 9 11 28 4 8 8 9 9 10 13 15 18 20 22 22 27 32 35 38 39 41 47 48 LCS_GDT D 562 D 562 9 11 28 4 4 8 9 9 10 13 15 18 20 22 22 26 27 28 35 38 41 47 48 LCS_GDT L 563 L 563 4 11 28 4 4 6 8 9 11 13 15 16 17 20 21 26 27 28 30 32 40 47 48 LCS_GDT D 564 D 564 3 11 28 3 3 5 8 9 11 13 15 16 20 22 22 26 27 28 30 30 35 47 48 LCS_GDT Y 565 Y 565 3 8 28 3 4 5 6 9 11 13 15 18 20 22 22 26 27 28 30 32 40 47 48 LCS_GDT D 566 D 566 3 8 28 3 3 5 6 8 11 13 15 18 20 22 22 26 31 35 37 38 41 47 48 LCS_GDT I 567 I 567 10 14 28 4 7 10 12 14 14 14 15 17 18 21 23 25 32 35 37 38 40 41 45 LCS_GDT H 568 H 568 10 14 28 4 7 10 12 14 14 14 15 17 17 20 22 24 28 31 33 36 39 41 42 LCS_GDT A 569 A 569 10 14 28 4 8 10 12 14 14 14 15 17 17 20 21 25 28 31 33 37 40 41 45 LCS_GDT I 570 I 570 10 14 28 4 8 10 12 14 14 14 15 17 17 22 23 26 32 35 37 38 41 47 48 LCS_GDT M 571 M 571 10 14 28 4 8 10 12 14 14 14 15 17 18 22 23 26 32 35 37 38 41 47 48 LCS_GDT D 572 D 572 10 14 28 4 8 10 12 14 14 14 15 17 20 22 23 26 32 35 37 38 41 47 48 LCS_GDT I 573 I 573 10 14 28 4 8 10 12 14 14 14 15 18 20 22 23 26 32 35 37 38 41 47 48 LCS_GDT L 574 L 574 10 14 30 4 8 10 12 14 14 14 15 18 20 22 25 30 32 35 38 39 41 47 48 LCS_GDT N 575 N 575 10 14 30 3 8 10 12 14 14 14 15 18 20 22 23 27 32 35 37 39 41 47 48 LCS_GDT E 576 E 576 10 14 31 3 8 10 12 14 14 14 15 18 20 22 25 30 32 35 38 39 41 47 48 LCS_GDT R 577 R 577 9 14 31 3 6 10 12 14 14 14 15 18 21 24 28 30 32 35 38 39 41 47 48 LCS_GDT I 578 I 578 9 14 31 3 5 9 11 14 14 14 14 16 20 24 28 30 32 35 38 39 41 47 48 LCS_GDT S 579 S 579 9 14 31 3 6 10 12 14 14 14 15 18 20 22 25 30 32 35 38 39 41 47 48 LCS_GDT N 580 N 580 7 14 31 3 5 6 11 14 14 14 17 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT S 581 S 581 5 8 31 4 5 5 7 8 10 13 15 18 21 24 28 30 32 35 38 39 41 47 48 LCS_GDT K 582 K 582 5 8 31 4 5 5 7 9 10 16 17 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 583 L 583 5 8 31 4 5 5 7 9 10 16 17 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT V 584 V 584 5 14 31 4 6 6 8 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT N 585 N 585 11 14 31 4 7 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT D 586 D 586 11 14 31 5 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT K 587 K 587 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT Q 588 Q 588 11 14 31 6 9 11 12 13 15 18 19 20 21 24 28 30 32 35 38 39 41 44 48 LCS_GDT K 589 K 589 11 14 31 5 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT K 590 K 590 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT H 591 H 591 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT I 592 I 592 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 593 L 593 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT G 594 G 594 11 14 31 6 9 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT E 595 E 595 11 14 31 5 7 11 12 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 596 L 596 6 14 31 5 6 7 11 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT Y 597 Y 597 6 14 31 3 6 7 8 13 15 17 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 598 L 598 6 8 31 4 6 7 7 9 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT F 599 F 599 6 8 31 4 6 7 7 9 13 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 600 L 600 6 8 31 4 6 9 12 13 15 18 19 20 22 24 28 29 32 35 38 39 41 47 48 LCS_GDT N 601 N 601 6 8 31 4 6 7 11 13 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT D 602 D 602 3 7 31 3 4 5 11 12 14 17 18 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT N 603 N 603 3 7 31 3 3 5 11 11 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT G 604 G 604 3 7 31 3 3 3 4 6 9 11 12 15 20 22 23 27 32 35 38 39 41 47 48 LCS_GDT Y 605 Y 605 5 7 31 3 4 5 5 6 7 12 14 18 22 24 28 30 32 35 38 39 41 47 48 LCS_GDT L 606 L 606 5 7 31 3 4 5 5 6 9 12 14 17 17 24 28 30 32 35 38 39 41 47 48 LCS_GDT K 607 K 607 5 7 31 3 3 5 5 6 7 7 8 11 13 17 23 28 30 33 38 39 41 44 46 LCS_GDT S 608 S 608 5 7 25 3 4 5 5 6 7 7 8 8 8 9 10 10 11 12 23 26 32 33 38 LCS_GDT I 609 I 609 5 6 10 3 4 5 5 5 6 6 8 8 8 9 10 10 11 12 13 14 17 22 25 LCS_AVERAGE LCS_A: 28.98 ( 14.00 20.41 52.52 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 11 12 14 15 18 19 20 22 24 28 30 32 35 38 39 41 47 48 GDT PERCENT_AT 10.71 16.07 19.64 21.43 25.00 26.79 32.14 33.93 35.71 39.29 42.86 50.00 53.57 57.14 62.50 67.86 69.64 73.21 83.93 85.71 GDT RMS_LOCAL 0.21 0.44 0.93 1.15 1.47 1.99 2.52 2.64 2.80 3.49 3.75 4.33 4.82 4.99 5.38 5.79 5.93 6.28 7.30 7.35 GDT RMS_ALL_AT 18.11 16.07 15.54 15.05 14.76 13.28 12.74 12.45 12.39 11.06 10.96 10.33 9.69 10.20 9.73 9.82 9.65 9.32 8.71 8.71 # Checking swapping # possible swapping detected: D 558 D 558 # possible swapping detected: D 562 D 562 # possible swapping detected: Y 565 Y 565 # possible swapping detected: E 595 E 595 # possible swapping detected: Y 597 Y 597 # possible swapping detected: Y 605 Y 605 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 14.662 0 0.033 0.592 16.478 0.000 0.000 LGA S 555 S 555 15.350 0 0.085 0.132 15.350 0.000 0.000 LGA I 556 I 556 15.753 0 0.052 0.070 19.493 0.000 0.000 LGA L 557 L 557 12.184 0 0.041 1.280 13.517 0.000 0.000 LGA D 558 D 558 11.219 0 0.047 1.059 11.775 0.000 0.000 LGA T 559 T 559 14.030 0 0.056 1.042 17.108 0.000 0.000 LGA L 560 L 560 13.168 0 0.300 1.417 14.671 0.000 0.000 LGA E 561 E 561 10.990 0 0.413 0.444 11.611 0.000 0.159 LGA D 562 D 562 14.201 0 0.524 0.515 17.833 0.000 0.000 LGA L 563 L 563 16.372 0 0.485 0.697 19.400 0.000 0.000 LGA D 564 D 564 19.683 0 0.637 1.320 21.894 0.000 0.000 LGA Y 565 Y 565 20.059 0 0.627 1.382 23.656 0.000 0.000 LGA D 566 D 566 20.564 0 0.056 0.272 21.415 0.000 0.000 LGA I 567 I 567 23.197 0 0.101 0.648 25.910 0.000 0.000 LGA H 568 H 568 26.101 0 0.120 1.296 32.678 0.000 0.000 LGA A 569 A 569 25.212 0 0.043 0.044 26.812 0.000 0.000 LGA I 570 I 570 19.768 0 0.177 0.709 22.741 0.000 0.000 LGA M 571 M 571 18.426 0 0.247 1.136 23.437 0.000 0.000 LGA D 572 D 572 20.735 0 0.349 1.084 26.021 0.000 0.000 LGA I 573 I 573 18.328 0 0.480 1.073 22.502 0.000 0.000 LGA L 574 L 574 13.108 0 0.676 1.233 15.294 0.000 0.060 LGA N 575 N 575 14.158 0 0.333 0.918 18.341 0.000 0.000 LGA E 576 E 576 14.342 0 0.124 0.859 19.030 0.000 0.000 LGA R 577 R 577 10.513 0 0.072 1.548 14.428 1.905 0.693 LGA I 578 I 578 8.048 0 0.061 1.294 11.094 4.881 2.619 LGA S 579 S 579 9.809 0 0.527 0.871 13.582 1.310 0.873 LGA N 580 N 580 8.369 0 0.477 0.866 12.145 2.381 1.250 LGA S 581 S 581 9.854 0 0.252 0.734 10.174 4.167 3.571 LGA K 582 K 582 8.515 0 0.285 0.993 15.856 2.143 0.952 LGA L 583 L 583 8.879 0 0.258 0.924 15.098 7.262 3.631 LGA V 584 V 584 2.717 0 0.669 1.310 5.484 54.643 51.361 LGA N 585 N 585 1.600 0 0.057 1.170 7.482 71.071 46.012 LGA D 586 D 586 0.947 0 0.084 0.847 2.398 88.214 82.738 LGA K 587 K 587 2.347 0 0.000 1.294 6.135 66.786 46.455 LGA Q 588 Q 588 2.981 0 0.064 1.330 7.094 57.143 37.513 LGA K 589 K 589 2.421 0 0.099 0.405 6.192 68.810 49.365 LGA K 590 K 590 1.200 0 0.048 1.174 9.684 83.690 51.693 LGA H 591 H 591 1.733 0 0.033 1.186 4.700 79.286 58.762 LGA I 592 I 592 1.787 0 0.084 1.465 6.941 79.286 62.560 LGA L 593 L 593 1.988 0 0.110 0.370 2.610 68.929 65.893 LGA G 594 G 594 1.855 0 0.110 0.110 1.990 75.000 75.000 LGA E 595 E 595 1.936 0 0.127 0.885 5.023 66.905 58.942 LGA L 596 L 596 2.800 0 0.597 1.487 8.573 57.262 36.964 LGA Y 597 Y 597 3.912 0 0.458 0.899 13.421 39.048 15.556 LGA L 598 L 598 3.545 0 0.272 1.200 8.606 51.905 34.583 LGA F 599 F 599 4.085 0 0.107 1.149 7.935 45.357 24.632 LGA L 600 L 600 3.072 0 0.590 0.691 7.844 53.810 35.893 LGA N 601 N 601 2.730 0 0.704 0.735 5.528 49.286 55.238 LGA D 602 D 602 5.439 0 0.676 1.229 11.403 44.524 23.155 LGA N 603 N 603 3.585 0 0.664 1.206 9.003 40.238 24.226 LGA G 604 G 604 7.537 0 0.451 0.451 8.080 10.833 10.833 LGA Y 605 Y 605 6.778 0 0.144 1.574 12.694 12.500 7.619 LGA L 606 L 606 8.412 0 0.184 1.195 13.072 4.286 2.143 LGA K 607 K 607 10.027 0 0.499 1.505 14.345 0.714 0.476 LGA S 608 S 608 15.743 0 0.061 0.791 17.209 0.000 0.000 LGA I 609 I 609 18.340 0 0.382 0.532 20.818 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 8.609 8.533 9.543 23.099 17.347 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 19 2.64 34.821 30.776 0.694 LGA_LOCAL RMSD: 2.636 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.454 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 8.609 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.395184 * X + 0.912257 * Y + -0.107782 * Z + -29.566248 Y_new = -0.240596 * X + 0.010447 * Y + 0.970569 * Z + 39.664749 Z_new = 0.886534 * X + 0.409485 * Y + 0.215357 * Z + -140.457993 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.594712 -1.089800 1.086627 [DEG: -148.6661 -62.4409 62.2591 ] ZXZ: -3.030995 1.353739 1.138095 [DEG: -173.6632 77.5635 65.2080 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS429_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS429_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 19 2.64 30.776 8.61 REMARK ---------------------------------------------------------- MOLECULE T0547TS429_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT 1TWI_A ATOM 4430 N GLN 554 0.237 111.548 -18.302 1.00 0.00 N ATOM 4431 CA GLN 554 -0.802 111.660 -17.284 1.00 0.00 C ATOM 4432 C GLN 554 -0.148 112.061 -15.942 1.00 0.00 C ATOM 4433 O GLN 554 0.972 111.664 -15.654 1.00 0.00 O ATOM 4434 CB GLN 554 -1.560 110.318 -17.228 1.00 0.00 C ATOM 4435 CG GLN 554 -2.923 110.293 -16.467 1.00 0.00 C ATOM 4436 CD GLN 554 -3.481 108.887 -16.330 1.00 0.00 C ATOM 4437 OE1 GLN 554 -2.997 107.932 -16.929 1.00 0.00 O ATOM 4438 NE2 GLN 554 -4.207 108.610 -15.267 1.00 0.00 N ATOM 4439 N SER 555 -0.699 113.015 -15.184 1.00 0.00 N ATOM 4440 CA SER 555 -0.134 113.570 -13.950 1.00 0.00 C ATOM 4441 C SER 555 -0.679 112.872 -12.674 1.00 0.00 C ATOM 4442 O SER 555 -1.605 112.062 -12.731 1.00 0.00 O ATOM 4443 CB SER 555 -0.405 115.081 -13.892 1.00 0.00 C ATOM 4444 OG SER 555 -1.776 115.380 -13.643 1.00 0.00 O ATOM 4445 N ILE 556 -0.065 113.134 -11.500 1.00 0.00 N ATOM 4446 CA ILE 556 -0.518 112.604 -10.220 1.00 0.00 C ATOM 4447 C ILE 556 -2.010 112.895 -10.026 1.00 0.00 C ATOM 4448 O ILE 556 -2.719 112.044 -9.516 1.00 0.00 O ATOM 4449 CB ILE 556 0.296 113.262 -9.080 1.00 0.00 C ATOM 4450 CG1 ILE 556 1.754 112.812 -9.163 1.00 0.00 C ATOM 4451 CG2 ILE 556 -0.252 112.897 -7.684 1.00 0.00 C ATOM 4452 CD1 ILE 556 2.696 113.601 -8.250 1.00 0.00 C ATOM 4453 N LEU 557 -2.519 114.067 -10.400 1.00 0.00 N ATOM 4454 CA LEU 557 -3.974 114.253 -10.328 1.00 0.00 C ATOM 4455 C LEU 557 -4.714 113.213 -11.183 1.00 0.00 C ATOM 4456 O LEU 557 -5.502 112.467 -10.623 1.00 0.00 O ATOM 4457 CB LEU 557 -4.354 115.653 -10.798 1.00 0.00 C ATOM 4458 CG LEU 557 -3.792 116.767 -9.917 1.00 0.00 C ATOM 4459 CD1 LEU 557 -4.023 118.146 -10.511 1.00 0.00 C ATOM 4460 CD2 LEU 557 -4.426 116.725 -8.538 1.00 0.00 C ATOM 4461 N ASP 558 -4.332 113.102 -12.471 1.00 0.00 N ATOM 4462 CA ASP 558 -4.884 112.241 -13.499 1.00 0.00 C ATOM 4463 C ASP 558 -4.844 110.798 -13.028 1.00 0.00 C ATOM 4464 O ASP 558 -5.723 110.020 -13.357 1.00 0.00 O ATOM 4465 CB ASP 558 -3.954 112.353 -14.718 1.00 0.00 C ATOM 4466 CG ASP 558 -4.009 113.550 -15.634 1.00 0.00 C ATOM 4467 OD1 ASP 558 -5.005 113.676 -16.357 1.00 0.00 O ATOM 4468 OD2 ASP 558 -2.984 114.264 -15.677 1.00 0.00 O ATOM 4469 N THR 559 -3.789 110.385 -12.303 1.00 0.00 N ATOM 4470 CA THR 559 -3.732 109.041 -11.743 1.00 0.00 C ATOM 4471 C THR 559 -4.890 108.797 -10.752 1.00 0.00 C ATOM 4472 O THR 559 -5.559 107.791 -10.918 1.00 0.00 O ATOM 4473 CB THR 559 -2.329 108.722 -11.182 1.00 0.00 C ATOM 4474 OG1 THR 559 -1.806 109.646 -10.228 1.00 0.00 O ATOM 4475 CG2 THR 559 -1.343 108.699 -12.345 1.00 0.00 C ATOM 4476 N LEU 560 -5.227 109.761 -9.869 1.00 0.00 N ATOM 4477 CA LEU 560 -6.390 109.714 -8.989 1.00 0.00 C ATOM 4478 C LEU 560 -7.660 110.262 -9.705 1.00 0.00 C ATOM 4479 O LEU 560 -8.656 110.666 -9.095 1.00 0.00 O ATOM 4480 CB LEU 560 -5.976 110.533 -7.752 1.00 0.00 C ATOM 4481 CG LEU 560 -7.074 110.783 -6.735 1.00 0.00 C ATOM 4482 CD1 LEU 560 -7.283 109.586 -5.829 1.00 0.00 C ATOM 4483 CD2 LEU 560 -6.710 111.990 -5.884 1.00 0.00 C ATOM 4484 N GLU 561 -7.645 110.224 -11.051 1.00 0.00 N ATOM 4485 CA GLU 561 -8.694 110.793 -11.862 1.00 0.00 C ATOM 4486 C GLU 561 -9.587 109.726 -12.531 1.00 0.00 C ATOM 4487 O GLU 561 -9.948 109.792 -13.696 1.00 0.00 O ATOM 4488 CB GLU 561 -8.021 111.749 -12.863 1.00 0.00 C ATOM 4489 CG GLU 561 -8.995 112.564 -13.712 1.00 0.00 C ATOM 4490 CD GLU 561 -8.397 113.788 -14.395 1.00 0.00 C ATOM 4491 OE1 GLU 561 -7.731 114.563 -13.666 1.00 0.00 O ATOM 4492 OE2 GLU 561 -8.756 114.061 -15.560 1.00 0.00 O ATOM 4493 N ASP 562 -10.020 108.809 -11.680 1.00 0.00 N ATOM 4494 CA ASP 562 -11.083 107.831 -11.687 1.00 0.00 C ATOM 4495 C ASP 562 -11.267 107.719 -10.178 1.00 0.00 C ATOM 4496 O ASP 562 -10.749 106.842 -9.495 1.00 0.00 O ATOM 4497 CB ASP 562 -10.702 106.522 -12.398 1.00 0.00 C ATOM 4498 CG ASP 562 -11.343 106.355 -13.772 1.00 0.00 C ATOM 4499 OD1 ASP 562 -11.520 107.357 -14.501 1.00 0.00 O ATOM 4500 OD2 ASP 562 -11.861 105.219 -13.934 1.00 0.00 O ATOM 4501 N LEU 563 -11.817 108.841 -9.663 1.00 0.00 N ATOM 4502 CA LEU 563 -11.915 109.118 -8.247 1.00 0.00 C ATOM 4503 C LEU 563 -13.004 108.336 -7.479 1.00 0.00 C ATOM 4504 O LEU 563 -14.220 108.466 -7.679 1.00 0.00 O ATOM 4505 CB LEU 563 -12.142 110.625 -8.090 1.00 0.00 C ATOM 4506 CG LEU 563 -11.799 111.165 -6.697 1.00 0.00 C ATOM 4507 CD1 LEU 563 -11.767 112.682 -6.724 1.00 0.00 C ATOM 4508 CD2 LEU 563 -12.772 110.749 -5.601 1.00 0.00 C ATOM 4509 N ASP 564 -12.532 107.563 -6.497 1.00 0.00 N ATOM 4510 CA ASP 564 -13.341 106.716 -5.634 1.00 0.00 C ATOM 4511 C ASP 564 -12.831 106.781 -4.179 1.00 0.00 C ATOM 4512 O ASP 564 -12.350 107.840 -3.812 1.00 0.00 O ATOM 4513 CB ASP 564 -13.354 105.260 -6.138 1.00 0.00 C ATOM 4514 CG ASP 564 -13.758 104.951 -7.577 1.00 0.00 C ATOM 4515 OD1 ASP 564 -14.601 104.047 -7.744 1.00 0.00 O ATOM 4516 OD2 ASP 564 -13.145 105.496 -8.505 1.00 0.00 O ATOM 4517 N TYR 565 -12.981 105.748 -3.319 1.00 0.00 N ATOM 4518 CA TYR 565 -12.528 105.775 -1.931 1.00 0.00 C ATOM 4519 C TYR 565 -13.220 106.799 -1.017 1.00 0.00 C ATOM 4520 O TYR 565 -12.667 107.182 0.009 1.00 0.00 O ATOM 4521 CB TYR 565 -11.013 106.075 -1.986 1.00 0.00 C ATOM 4522 CG TYR 565 -10.188 106.340 -0.759 1.00 0.00 C ATOM 4523 CD1 TYR 565 -9.571 105.294 -0.032 1.00 0.00 C ATOM 4524 CD2 TYR 565 -9.785 107.680 -0.567 1.00 0.00 C ATOM 4525 CE1 TYR 565 -8.681 105.650 1.014 1.00 0.00 C ATOM 4526 CE2 TYR 565 -8.865 108.013 0.441 1.00 0.00 C ATOM 4527 CZ TYR 565 -8.312 107.007 1.263 1.00 0.00 C ATOM 4528 OH TYR 565 -7.687 107.333 2.432 1.00 0.00 H ATOM 4529 N ASP 566 -14.474 107.177 -1.221 1.00 0.00 N ATOM 4530 CA ASP 566 -15.020 108.199 -0.347 1.00 0.00 C ATOM 4531 C ASP 566 -16.174 107.594 0.444 1.00 0.00 C ATOM 4532 O ASP 566 -17.250 107.452 -0.148 1.00 0.00 O ATOM 4533 CB ASP 566 -15.512 109.323 -1.269 1.00 0.00 C ATOM 4534 CG ASP 566 -16.026 110.563 -0.556 1.00 0.00 C ATOM 4535 OD1 ASP 566 -15.659 110.740 0.618 1.00 0.00 O ATOM 4536 OD2 ASP 566 -16.612 111.403 -1.292 1.00 0.00 O ATOM 4537 N ILE 567 -16.011 107.176 1.721 1.00 0.00 N ATOM 4538 CA ILE 567 -17.218 106.671 2.391 1.00 0.00 C ATOM 4539 C ILE 567 -17.770 107.557 3.530 1.00 0.00 C ATOM 4540 O ILE 567 -18.837 108.139 3.387 1.00 0.00 O ATOM 4541 CB ILE 567 -17.002 105.230 2.918 1.00 0.00 C ATOM 4542 CG1 ILE 567 -16.785 104.244 1.773 1.00 0.00 C ATOM 4543 CG2 ILE 567 -18.162 104.693 3.784 1.00 0.00 C ATOM 4544 CD1 ILE 567 -17.936 104.131 0.779 1.00 0.00 C ATOM 4545 N HIS 568 -17.204 107.497 4.725 1.00 0.00 N ATOM 4546 CA HIS 568 -17.469 108.306 5.912 1.00 0.00 C ATOM 4547 C HIS 568 -16.357 107.921 6.846 1.00 0.00 C ATOM 4548 O HIS 568 -16.012 108.651 7.717 1.00 0.00 O ATOM 4549 CB HIS 568 -18.841 108.086 6.597 1.00 0.00 C ATOM 4550 CG HIS 568 -19.138 106.765 7.290 1.00 0.00 C ATOM 4551 ND1 HIS 568 -19.614 105.652 6.612 1.00 0.00 N ATOM 4552 CD2 HIS 568 -19.066 106.362 8.605 1.00 0.00 C ATOM 4553 CE1 HIS 568 -19.976 104.724 7.515 1.00 0.00 C ATOM 4554 NE2 HIS 568 -19.636 105.097 8.741 1.00 0.00 N ATOM 4555 N ALA 569 -15.977 106.646 6.825 1.00 0.00 N ATOM 4556 CA ALA 569 -14.904 106.127 7.641 1.00 0.00 C ATOM 4557 C ALA 569 -13.599 106.240 6.898 1.00 0.00 C ATOM 4558 O ALA 569 -12.681 106.740 7.495 1.00 0.00 O ATOM 4559 CB ALA 569 -15.182 104.671 8.030 1.00 0.00 C ATOM 4560 N ILE 570 -13.427 105.802 5.634 1.00 0.00 N ATOM 4561 CA ILE 570 -12.215 106.297 5.022 1.00 0.00 C ATOM 4562 C ILE 570 -12.522 107.804 4.925 1.00 0.00 C ATOM 4563 O ILE 570 -11.793 108.490 5.580 1.00 0.00 O ATOM 4564 CB ILE 570 -11.692 105.594 3.748 1.00 0.00 C ATOM 4565 CG1 ILE 570 -11.347 104.087 3.946 1.00 0.00 C ATOM 4566 CG2 ILE 570 -10.455 106.353 3.302 1.00 0.00 C ATOM 4567 CD1 ILE 570 -10.884 103.663 5.345 1.00 0.00 C ATOM 4568 N MET 571 -13.700 108.340 4.542 1.00 0.00 N ATOM 4569 CA MET 571 -14.035 109.766 4.665 1.00 0.00 C ATOM 4570 C MET 571 -13.923 110.399 6.070 1.00 0.00 C ATOM 4571 O MET 571 -14.255 111.560 6.198 1.00 0.00 O ATOM 4572 CB MET 571 -15.486 109.920 4.229 1.00 0.00 C ATOM 4573 CG MET 571 -15.864 111.194 3.434 1.00 0.00 C ATOM 4574 SD MET 571 -17.692 111.136 3.024 1.00 0.00 S ATOM 4575 CE MET 571 -17.872 112.900 2.945 1.00 0.00 C ATOM 4576 N ASP 572 -13.686 109.647 7.144 1.00 0.00 N ATOM 4577 CA ASP 572 -13.357 110.142 8.508 1.00 0.00 C ATOM 4578 C ASP 572 -12.055 109.484 9.085 1.00 0.00 C ATOM 4579 O ASP 572 -11.732 109.621 10.265 1.00 0.00 O ATOM 4580 CB ASP 572 -14.454 109.941 9.587 1.00 0.00 C ATOM 4581 CG ASP 572 -15.658 110.885 9.598 1.00 0.00 C ATOM 4582 OD1 ASP 572 -15.826 111.702 8.662 1.00 0.00 O ATOM 4583 OD2 ASP 572 -16.427 110.794 10.587 1.00 0.00 O ATOM 4584 N ILE 573 -11.306 108.654 8.335 1.00 0.00 N ATOM 4585 CA ILE 573 -9.921 108.189 8.530 1.00 0.00 C ATOM 4586 C ILE 573 -9.385 108.181 7.059 1.00 0.00 C ATOM 4587 O ILE 573 -8.952 107.217 6.437 1.00 0.00 O ATOM 4588 CB ILE 573 -9.729 106.867 9.329 1.00 0.00 C ATOM 4589 CG1 ILE 573 -10.498 105.669 8.778 1.00 0.00 C ATOM 4590 CG2 ILE 573 -10.080 107.066 10.802 1.00 0.00 C ATOM 4591 CD1 ILE 573 -10.079 104.302 9.318 1.00 0.00 C ATOM 4592 N LEU 574 -9.475 109.411 6.562 1.00 0.00 N ATOM 4593 CA LEU 574 -9.621 110.275 5.370 1.00 0.00 C ATOM 4594 C LEU 574 -10.599 111.283 5.954 1.00 0.00 C ATOM 4595 O LEU 574 -11.283 110.946 6.884 1.00 0.00 O ATOM 4596 CB LEU 574 -10.187 109.762 4.023 1.00 0.00 C ATOM 4597 CG LEU 574 -10.127 110.731 2.832 1.00 0.00 C ATOM 4598 CD1 LEU 574 -8.707 110.820 2.299 1.00 0.00 C ATOM 4599 CD2 LEU 574 -11.048 110.264 1.719 1.00 0.00 C ATOM 4600 N ASN 575 -10.662 112.541 5.576 1.00 0.00 N ATOM 4601 CA ASN 575 -11.405 113.489 6.423 1.00 0.00 C ATOM 4602 C ASN 575 -11.328 113.315 7.973 1.00 0.00 C ATOM 4603 O ASN 575 -12.163 113.757 8.736 1.00 0.00 O ATOM 4604 CB ASN 575 -12.832 113.652 5.936 1.00 0.00 C ATOM 4605 CG ASN 575 -13.439 115.022 6.189 1.00 0.00 C ATOM 4606 OD1 ASN 575 -12.940 115.820 6.975 1.00 0.00 O ATOM 4607 ND2 ASN 575 -14.418 115.419 5.361 1.00 0.00 N ATOM 4608 N GLU 576 -10.223 112.743 8.404 1.00 0.00 N ATOM 4609 CA GLU 576 -9.567 112.671 9.686 1.00 0.00 C ATOM 4610 C GLU 576 -8.194 112.298 9.151 1.00 0.00 C ATOM 4611 O GLU 576 -7.192 112.779 9.571 1.00 0.00 O ATOM 4612 CB GLU 576 -10.037 111.661 10.753 1.00 0.00 C ATOM 4613 CG GLU 576 -9.162 111.800 12.023 1.00 0.00 C ATOM 4614 CD GLU 576 -9.567 111.104 13.311 1.00 0.00 C ATOM 4615 OE1 GLU 576 -10.757 111.149 13.663 1.00 0.00 O ATOM 4616 OE2 GLU 576 -8.653 110.609 14.007 1.00 0.00 O ATOM 4617 N ARG 577 -8.045 111.418 8.165 1.00 0.00 N ATOM 4618 CA ARG 577 -6.817 111.523 7.413 1.00 0.00 C ATOM 4619 C ARG 577 -6.750 112.917 6.758 1.00 0.00 C ATOM 4620 O ARG 577 -5.696 113.543 6.825 1.00 0.00 O ATOM 4621 CB ARG 577 -6.762 110.499 6.307 1.00 0.00 C ATOM 4622 CG ARG 577 -6.075 109.170 6.536 1.00 0.00 C ATOM 4623 CD ARG 577 -6.060 108.428 5.192 1.00 0.00 C ATOM 4624 NE ARG 577 -4.959 108.851 4.333 1.00 0.00 N ATOM 4625 CZ ARG 577 -5.069 109.629 3.263 1.00 0.00 C ATOM 4626 NH1 ARG 577 -4.347 110.724 3.309 1.00 0.00 H ATOM 4627 NH2 ARG 577 -5.869 109.328 2.242 1.00 0.00 H ATOM 4628 N ILE 578 -7.840 113.379 6.060 1.00 0.00 N ATOM 4629 CA ILE 578 -7.860 114.672 5.369 1.00 0.00 C ATOM 4630 C ILE 578 -7.481 115.692 6.445 1.00 0.00 C ATOM 4631 O ILE 578 -6.578 116.500 6.247 1.00 0.00 O ATOM 4632 CB ILE 578 -9.123 115.210 4.621 1.00 0.00 C ATOM 4633 CG1 ILE 578 -8.677 116.366 3.755 1.00 0.00 C ATOM 4634 CG2 ILE 578 -10.237 115.829 5.445 1.00 0.00 C ATOM 4635 CD1 ILE 578 -7.579 116.025 2.747 1.00 0.00 C ATOM 4636 N SER 579 -8.151 115.686 7.607 1.00 0.00 N ATOM 4637 CA SER 579 -7.594 116.445 8.717 1.00 0.00 C ATOM 4638 C SER 579 -7.003 115.467 9.731 1.00 0.00 C ATOM 4639 O SER 579 -7.521 115.160 10.795 1.00 0.00 O ATOM 4640 CB SER 579 -8.665 117.355 9.291 1.00 0.00 C ATOM 4641 OG SER 579 -9.824 116.605 9.613 1.00 0.00 O ATOM 4642 N ASN 580 -5.783 115.078 9.340 1.00 0.00 N ATOM 4643 CA ASN 580 -4.922 113.999 9.815 1.00 0.00 C ATOM 4644 C ASN 580 -5.015 113.310 11.220 1.00 0.00 C ATOM 4645 O ASN 580 -4.605 113.873 12.244 1.00 0.00 O ATOM 4646 CB ASN 580 -3.549 114.686 9.657 1.00 0.00 C ATOM 4647 CG ASN 580 -2.309 113.824 9.545 1.00 0.00 C ATOM 4648 OD1 ASN 580 -2.284 112.694 9.991 1.00 0.00 O ATOM 4649 ND2 ASN 580 -1.231 114.310 8.927 1.00 0.00 N ATOM 4650 N SER 581 -5.308 111.995 11.171 1.00 0.00 N ATOM 4651 CA SER 581 -5.162 110.944 12.136 1.00 0.00 C ATOM 4652 C SER 581 -4.095 110.065 11.474 1.00 0.00 C ATOM 4653 O SER 581 -4.365 109.048 10.840 1.00 0.00 O ATOM 4654 CB SER 581 -6.474 110.212 12.331 1.00 0.00 C ATOM 4655 OG SER 581 -7.053 109.787 11.090 1.00 0.00 O ATOM 4656 N LYS 582 -2.853 110.553 11.563 1.00 0.00 N ATOM 4657 CA LYS 582 -1.651 110.154 10.843 1.00 0.00 C ATOM 4658 C LYS 582 -1.529 108.682 10.380 1.00 0.00 C ATOM 4659 O LYS 582 -0.837 108.376 9.407 1.00 0.00 O ATOM 4660 CB LYS 582 -0.391 110.398 11.725 1.00 0.00 C ATOM 4661 CG LYS 582 0.050 111.817 12.122 1.00 0.00 C ATOM 4662 CD LYS 582 1.054 111.706 13.258 1.00 0.00 C ATOM 4663 CE LYS 582 1.611 112.963 13.944 1.00 0.00 C ATOM 4664 NZ LYS 582 2.383 112.567 15.156 1.00 0.00 N ATOM 4665 N LEU 583 -2.056 107.751 11.200 1.00 0.00 N ATOM 4666 CA LEU 583 -1.938 106.335 10.952 1.00 0.00 C ATOM 4667 C LEU 583 -2.462 105.996 9.533 1.00 0.00 C ATOM 4668 O LEU 583 -1.741 105.381 8.761 1.00 0.00 O ATOM 4669 CB LEU 583 -2.749 105.579 12.000 1.00 0.00 C ATOM 4670 CG LEU 583 -2.259 105.584 13.461 1.00 0.00 C ATOM 4671 CD1 LEU 583 -0.903 104.888 13.615 1.00 0.00 C ATOM 4672 CD2 LEU 583 -2.196 106.989 14.058 1.00 0.00 C ATOM 4673 N VAL 584 -3.708 106.352 9.142 1.00 0.00 N ATOM 4674 CA VAL 584 -4.160 106.020 7.778 1.00 0.00 C ATOM 4675 C VAL 584 -3.514 107.016 6.763 1.00 0.00 C ATOM 4676 O VAL 584 -3.322 106.650 5.586 1.00 0.00 O ATOM 4677 CB VAL 584 -5.709 106.022 7.707 1.00 0.00 C ATOM 4678 CG1 VAL 584 -6.310 105.579 6.370 1.00 0.00 C ATOM 4679 CG2 VAL 584 -6.327 105.136 8.792 1.00 0.00 C ATOM 4680 N ASN 585 -3.134 108.258 7.189 1.00 0.00 N ATOM 4681 CA ASN 585 -2.408 109.169 6.271 1.00 0.00 C ATOM 4682 C ASN 585 -1.041 108.673 5.895 1.00 0.00 C ATOM 4683 O ASN 585 -0.465 107.840 6.597 1.00 0.00 O ATOM 4684 CB ASN 585 -2.217 110.545 6.903 1.00 0.00 C ATOM 4685 CG ASN 585 -3.456 111.402 6.844 1.00 0.00 C ATOM 4686 OD1 ASN 585 -3.955 111.640 5.761 1.00 0.00 O ATOM 4687 ND2 ASN 585 -4.000 111.810 7.968 1.00 0.00 N ATOM 4688 N ASP 586 -0.587 109.173 4.741 1.00 0.00 N ATOM 4689 CA ASP 586 0.662 108.802 4.095 1.00 0.00 C ATOM 4690 C ASP 586 0.622 107.331 3.649 1.00 0.00 C ATOM 4691 O ASP 586 1.170 107.011 2.603 1.00 0.00 O ATOM 4692 CB ASP 586 1.873 109.138 4.984 1.00 0.00 C ATOM 4693 CG ASP 586 2.062 110.643 5.206 1.00 0.00 C ATOM 4694 OD1 ASP 586 1.456 111.434 4.425 1.00 0.00 O ATOM 4695 OD2 ASP 586 2.859 110.979 6.110 1.00 0.00 O ATOM 4696 N LYS 587 -0.253 106.531 4.267 1.00 0.00 N ATOM 4697 CA LYS 587 -0.573 105.144 3.968 1.00 0.00 C ATOM 4698 C LYS 587 -1.547 105.085 2.783 1.00 0.00 C ATOM 4699 O LYS 587 -1.310 104.304 1.856 1.00 0.00 O ATOM 4700 CB LYS 587 -1.131 104.496 5.263 1.00 0.00 C ATOM 4701 CG LYS 587 -1.411 102.995 5.207 1.00 0.00 C ATOM 4702 CD LYS 587 -1.910 102.438 6.535 1.00 0.00 C ATOM 4703 CE LYS 587 -1.661 100.971 6.800 1.00 0.00 C ATOM 4704 NZ LYS 587 -0.225 100.589 6.799 1.00 0.00 N ATOM 4705 N GLN 588 -2.574 105.951 2.736 1.00 0.00 N ATOM 4706 CA GLN 588 -3.377 105.886 1.542 1.00 0.00 C ATOM 4707 C GLN 588 -2.858 106.657 0.317 1.00 0.00 C ATOM 4708 O GLN 588 -3.044 106.112 -0.759 1.00 0.00 O ATOM 4709 CB GLN 588 -4.825 106.238 1.777 1.00 0.00 C ATOM 4710 CG GLN 588 -5.671 105.626 0.644 1.00 0.00 C ATOM 4711 CD GLN 588 -5.677 104.104 0.657 1.00 0.00 C ATOM 4712 OE1 GLN 588 -5.743 103.516 -0.407 1.00 0.00 O ATOM 4713 NE2 GLN 588 -5.584 103.464 1.832 1.00 0.00 N ATOM 4714 N LYS 589 -2.115 107.792 0.436 1.00 0.00 N ATOM 4715 CA LYS 589 -1.458 108.384 -0.772 1.00 0.00 C ATOM 4716 C LYS 589 -0.629 107.255 -1.443 1.00 0.00 C ATOM 4717 O LYS 589 -0.763 106.989 -2.641 1.00 0.00 O ATOM 4718 CB LYS 589 -0.496 109.564 -0.521 1.00 0.00 C ATOM 4719 CG LYS 589 -0.961 110.891 0.091 1.00 0.00 C ATOM 4720 CD LYS 589 0.248 111.761 0.486 1.00 0.00 C ATOM 4721 CE LYS 589 0.092 112.496 1.827 1.00 0.00 C ATOM 4722 NZ LYS 589 1.357 112.993 2.383 1.00 0.00 N ATOM 4723 N LYS 590 0.147 106.526 -0.586 1.00 0.00 N ATOM 4724 CA LYS 590 0.898 105.378 -1.084 1.00 0.00 C ATOM 4725 C LYS 590 -0.007 104.259 -1.656 1.00 0.00 C ATOM 4726 O LYS 590 0.272 103.775 -2.744 1.00 0.00 O ATOM 4727 CB LYS 590 1.819 104.799 -0.008 1.00 0.00 C ATOM 4728 CG LYS 590 2.682 103.702 -0.627 1.00 0.00 C ATOM 4729 CD LYS 590 3.686 103.072 0.331 1.00 0.00 C ATOM 4730 CE LYS 590 4.577 102.066 -0.397 1.00 0.00 C ATOM 4731 NZ LYS 590 3.832 100.942 -1.040 1.00 0.00 N ATOM 4732 N HIS 591 -1.021 103.799 -0.907 1.00 0.00 N ATOM 4733 CA HIS 591 -1.892 102.737 -1.430 1.00 0.00 C ATOM 4734 C HIS 591 -2.556 103.090 -2.784 1.00 0.00 C ATOM 4735 O HIS 591 -2.426 102.320 -3.739 1.00 0.00 O ATOM 4736 CB HIS 591 -2.976 102.338 -0.389 1.00 0.00 C ATOM 4737 CG HIS 591 -2.610 101.537 0.848 1.00 0.00 C ATOM 4738 ND1 HIS 591 -2.718 100.160 0.865 1.00 0.00 N ATOM 4739 CD2 HIS 591 -2.369 101.864 2.156 1.00 0.00 C ATOM 4740 CE1 HIS 591 -2.622 99.732 2.143 1.00 0.00 C ATOM 4741 NE2 HIS 591 -2.335 100.733 2.976 1.00 0.00 N ATOM 4742 N ILE 592 -3.189 104.274 -2.868 1.00 0.00 N ATOM 4743 CA ILE 592 -3.914 104.674 -4.098 1.00 0.00 C ATOM 4744 C ILE 592 -2.936 104.601 -5.284 1.00 0.00 C ATOM 4745 O ILE 592 -3.126 103.813 -6.192 1.00 0.00 O ATOM 4746 CB ILE 592 -4.578 106.075 -4.025 1.00 0.00 C ATOM 4747 CG1 ILE 592 -3.537 107.212 -3.909 1.00 0.00 C ATOM 4748 CG2 ILE 592 -5.542 106.148 -2.826 1.00 0.00 C ATOM 4749 CD1 ILE 592 -4.054 108.638 -4.060 1.00 0.00 C ATOM 4750 N LEU 593 -1.758 105.252 -5.218 1.00 0.00 N ATOM 4751 CA LEU 593 -0.773 105.193 -6.300 1.00 0.00 C ATOM 4752 C LEU 593 -0.330 103.757 -6.650 1.00 0.00 C ATOM 4753 O LEU 593 0.064 103.499 -7.779 1.00 0.00 O ATOM 4754 CB LEU 593 0.448 105.974 -5.828 1.00 0.00 C ATOM 4755 CG LEU 593 0.174 107.451 -5.593 1.00 0.00 C ATOM 4756 CD1 LEU 593 1.421 108.107 -5.010 1.00 0.00 C ATOM 4757 CD2 LEU 593 -0.205 108.149 -6.898 1.00 0.00 C ATOM 4758 N GLY 594 -0.203 102.853 -5.675 1.00 0.00 N ATOM 4759 CA GLY 594 0.245 101.510 -6.071 1.00 0.00 C ATOM 4760 C GLY 594 -0.907 100.618 -6.577 1.00 0.00 C ATOM 4761 O GLY 594 -0.923 100.260 -7.744 1.00 0.00 O ATOM 4762 N GLU 595 -1.931 100.309 -5.753 1.00 0.00 N ATOM 4763 CA GLU 595 -2.929 99.314 -6.179 1.00 0.00 C ATOM 4764 C GLU 595 -4.140 99.918 -6.932 1.00 0.00 C ATOM 4765 O GLU 595 -4.654 99.294 -7.852 1.00 0.00 O ATOM 4766 CB GLU 595 -3.625 98.543 -5.042 1.00 0.00 C ATOM 4767 CG GLU 595 -3.093 97.767 -3.841 1.00 0.00 C ATOM 4768 CD GLU 595 -2.411 96.425 -3.894 1.00 0.00 C ATOM 4769 OE1 GLU 595 -3.080 95.410 -4.124 1.00 0.00 O ATOM 4770 OE2 GLU 595 -1.270 96.479 -3.397 1.00 0.00 O ATOM 4771 N LEU 596 -4.768 101.035 -6.494 1.00 0.00 N ATOM 4772 CA LEU 596 -6.041 101.397 -7.129 1.00 0.00 C ATOM 4773 C LEU 596 -6.030 102.766 -7.820 1.00 0.00 C ATOM 4774 O LEU 596 -5.475 103.728 -7.312 1.00 0.00 O ATOM 4775 CB LEU 596 -7.117 101.332 -6.037 1.00 0.00 C ATOM 4776 CG LEU 596 -7.216 99.935 -5.391 1.00 0.00 C ATOM 4777 CD1 LEU 596 -8.275 99.844 -4.302 1.00 0.00 C ATOM 4778 CD2 LEU 596 -7.527 98.833 -6.400 1.00 0.00 C ATOM 4779 N TYR 597 -6.578 102.841 -9.035 1.00 0.00 N ATOM 4780 CA TYR 597 -6.422 103.956 -9.965 1.00 0.00 C ATOM 4781 C TYR 597 -5.087 104.644 -9.849 1.00 0.00 C ATOM 4782 O TYR 597 -4.858 105.740 -9.353 1.00 0.00 O ATOM 4783 CB TYR 597 -7.616 104.885 -10.000 1.00 0.00 C ATOM 4784 CG TYR 597 -8.839 104.115 -10.448 1.00 0.00 C ATOM 4785 CD1 TYR 597 -8.834 103.520 -11.729 1.00 0.00 C ATOM 4786 CD2 TYR 597 -10.022 104.150 -9.681 1.00 0.00 C ATOM 4787 CE1 TYR 597 -10.027 102.936 -12.219 1.00 0.00 C ATOM 4788 CE2 TYR 597 -11.210 103.615 -10.202 1.00 0.00 C ATOM 4789 CZ TYR 597 -11.211 102.937 -11.437 1.00 0.00 C ATOM 4790 OH TYR 597 -12.395 102.671 -12.037 1.00 0.00 H ATOM 4791 N LEU 598 -4.165 103.816 -10.304 1.00 0.00 N ATOM 4792 CA LEU 598 -2.893 104.209 -10.795 1.00 0.00 C ATOM 4793 C LEU 598 -2.666 103.122 -11.846 1.00 0.00 C ATOM 4794 O LEU 598 -2.993 103.391 -12.990 1.00 0.00 O ATOM 4795 CB LEU 598 -1.847 104.285 -9.686 1.00 0.00 C ATOM 4796 CG LEU 598 -0.457 104.634 -10.202 1.00 0.00 C ATOM 4797 CD1 LEU 598 0.157 103.441 -10.897 1.00 0.00 C ATOM 4798 CD2 LEU 598 -0.414 105.822 -11.162 1.00 0.00 C ATOM 4799 N PHE 599 -2.345 101.848 -11.496 1.00 0.00 N ATOM 4800 CA PHE 599 -2.070 100.795 -12.470 1.00 0.00 C ATOM 4801 C PHE 599 -3.230 100.686 -13.445 1.00 0.00 C ATOM 4802 O PHE 599 -2.998 100.676 -14.659 1.00 0.00 O ATOM 4803 CB PHE 599 -1.797 99.469 -11.759 1.00 0.00 C ATOM 4804 CG PHE 599 -1.605 98.272 -12.674 1.00 0.00 C ATOM 4805 CD1 PHE 599 -0.306 97.822 -12.979 1.00 0.00 C ATOM 4806 CD2 PHE 599 -2.707 97.454 -12.993 1.00 0.00 C ATOM 4807 CE1 PHE 599 -0.107 96.516 -13.461 1.00 0.00 C ATOM 4808 CE2 PHE 599 -2.511 96.139 -13.450 1.00 0.00 C ATOM 4809 CZ PHE 599 -1.205 95.664 -13.663 1.00 0.00 C ATOM 4810 N LEU 600 -4.467 100.652 -12.925 1.00 0.00 N ATOM 4811 CA LEU 600 -5.601 100.825 -13.799 1.00 0.00 C ATOM 4812 C LEU 600 -5.844 102.282 -14.085 1.00 0.00 C ATOM 4813 O LEU 600 -6.223 103.087 -13.241 1.00 0.00 O ATOM 4814 CB LEU 600 -6.880 100.215 -13.223 1.00 0.00 C ATOM 4815 CG LEU 600 -8.087 100.359 -14.163 1.00 0.00 C ATOM 4816 CD1 LEU 600 -7.993 99.513 -15.432 1.00 0.00 C ATOM 4817 CD2 LEU 600 -9.369 100.001 -13.442 1.00 0.00 C ATOM 4818 N ASN 601 -5.449 102.623 -15.303 1.00 0.00 N ATOM 4819 CA ASN 601 -5.954 103.832 -15.922 1.00 0.00 C ATOM 4820 C ASN 601 -7.353 103.470 -16.413 1.00 0.00 C ATOM 4821 O ASN 601 -7.955 102.518 -15.927 1.00 0.00 O ATOM 4822 CB ASN 601 -5.015 104.166 -17.084 1.00 0.00 C ATOM 4823 CG ASN 601 -3.618 104.572 -16.683 1.00 0.00 C ATOM 4824 OD1 ASN 601 -3.447 105.182 -15.627 1.00 0.00 O ATOM 4825 ND2 ASN 601 -2.614 104.218 -17.510 1.00 0.00 N ATOM 4826 N ASP 602 -7.836 104.066 -17.505 1.00 0.00 N ATOM 4827 CA ASP 602 -8.885 103.324 -18.169 1.00 0.00 C ATOM 4828 C ASP 602 -8.251 102.107 -18.911 1.00 0.00 C ATOM 4829 O ASP 602 -8.997 101.317 -19.476 1.00 0.00 O ATOM 4830 CB ASP 602 -9.644 104.171 -19.187 1.00 0.00 C ATOM 4831 CG ASP 602 -10.728 105.153 -18.789 1.00 0.00 C ATOM 4832 OD1 ASP 602 -11.200 105.100 -17.646 1.00 0.00 O ATOM 4833 OD2 ASP 602 -11.139 105.894 -19.709 1.00 0.00 O ATOM 4834 N ASN 603 -6.906 101.905 -18.899 1.00 0.00 N ATOM 4835 CA ASN 603 -6.326 100.897 -19.762 1.00 0.00 C ATOM 4836 C ASN 603 -5.768 99.615 -19.156 1.00 0.00 C ATOM 4837 O ASN 603 -5.865 98.572 -19.799 1.00 0.00 O ATOM 4838 CB ASN 603 -5.192 101.560 -20.576 1.00 0.00 C ATOM 4839 CG ASN 603 -5.669 102.675 -21.504 1.00 0.00 C ATOM 4840 OD1 ASN 603 -6.805 102.645 -21.960 1.00 0.00 O ATOM 4841 ND2 ASN 603 -4.823 103.679 -21.786 1.00 0.00 N ATOM 4842 N GLY 604 -5.102 99.662 -18.000 1.00 0.00 N ATOM 4843 CA GLY 604 -4.405 98.458 -17.548 1.00 0.00 C ATOM 4844 C GLY 604 -5.324 97.272 -17.314 1.00 0.00 C ATOM 4845 O GLY 604 -5.515 96.423 -18.171 1.00 0.00 O ATOM 4846 N TYR 605 -5.858 97.221 -16.096 1.00 0.00 N ATOM 4847 CA TYR 605 -6.945 96.455 -15.561 1.00 0.00 C ATOM 4848 C TYR 605 -6.654 96.448 -14.070 1.00 0.00 C ATOM 4849 O TYR 605 -5.639 95.932 -13.632 1.00 0.00 O ATOM 4850 CB TYR 605 -7.089 95.031 -16.103 1.00 0.00 C ATOM 4851 CG TYR 605 -8.116 94.229 -15.319 1.00 0.00 C ATOM 4852 CD1 TYR 605 -9.492 94.336 -15.633 1.00 0.00 C ATOM 4853 CD2 TYR 605 -7.738 93.741 -14.041 1.00 0.00 C ATOM 4854 CE1 TYR 605 -10.454 93.896 -14.683 1.00 0.00 C ATOM 4855 CE2 TYR 605 -8.694 93.318 -13.104 1.00 0.00 C ATOM 4856 CZ TYR 605 -10.071 93.382 -13.415 1.00 0.00 C ATOM 4857 OH TYR 605 -10.989 92.732 -12.659 1.00 0.00 H ATOM 4858 N LEU 606 -7.487 97.128 -13.300 1.00 0.00 N ATOM 4859 CA LEU 606 -7.468 97.068 -11.867 1.00 0.00 C ATOM 4860 C LEU 606 -8.856 97.486 -11.386 1.00 0.00 C ATOM 4861 O LEU 606 -9.843 97.387 -12.111 1.00 0.00 O ATOM 4862 CB LEU 606 -6.370 97.905 -11.179 1.00 0.00 C ATOM 4863 CG LEU 606 -4.981 97.278 -11.213 1.00 0.00 C ATOM 4864 CD1 LEU 606 -4.060 98.135 -10.367 1.00 0.00 C ATOM 4865 CD2 LEU 606 -5.000 95.856 -10.633 1.00 0.00 C ATOM 4866 N LYS 607 -8.955 97.806 -10.089 1.00 0.00 N ATOM 4867 CA LYS 607 -10.130 98.304 -9.406 1.00 0.00 C ATOM 4868 C LYS 607 -9.921 99.766 -8.933 1.00 0.00 C ATOM 4869 O LYS 607 -8.810 100.251 -8.792 1.00 0.00 O ATOM 4870 CB LYS 607 -10.431 97.385 -8.176 1.00 0.00 C ATOM 4871 CG LYS 607 -11.828 97.670 -7.643 1.00 0.00 C ATOM 4872 CD LYS 607 -12.378 96.874 -6.493 1.00 0.00 C ATOM 4873 CE LYS 607 -12.267 97.731 -5.228 1.00 0.00 C ATOM 4874 NZ LYS 607 -13.081 98.983 -5.177 1.00 0.00 N ATOM 4875 N SER 608 -11.052 100.422 -8.669 1.00 0.00 N ATOM 4876 CA SER 608 -11.258 101.699 -8.031 1.00 0.00 C ATOM 4877 C SER 608 -10.794 101.603 -6.600 1.00 0.00 C ATOM 4878 O SER 608 -10.811 100.498 -6.055 1.00 0.00 O ATOM 4879 CB SER 608 -12.754 101.899 -8.092 1.00 0.00 C ATOM 4880 OG SER 608 -13.433 100.835 -7.407 1.00 0.00 O ATOM 4881 N ILE 609 -10.399 102.767 -6.049 1.00 0.00 N ATOM 4882 CA ILE 609 -9.970 102.808 -4.673 1.00 0.00 C ATOM 4883 C ILE 609 -11.106 102.334 -3.763 1.00 0.00 C ATOM 4884 O ILE 609 -12.160 102.953 -3.715 1.00 0.00 O ATOM 4885 CB ILE 609 -9.566 104.230 -4.267 1.00 0.00 C ATOM 4886 CG1 ILE 609 -8.650 104.996 -5.232 1.00 0.00 C ATOM 4887 CG2 ILE 609 -8.882 104.116 -2.880 1.00 0.00 C ATOM 4888 CD1 ILE 609 -7.212 104.528 -5.236 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 74.90 45.5 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 63.31 55.7 70 100.0 70 ARMSMC SURFACE . . . . . . . . 78.41 40.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 56.48 70.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.67 37.7 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 79.13 38.5 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 76.34 39.4 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 82.99 37.2 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 63.42 40.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.82 36.2 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 74.50 43.3 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 93.37 29.0 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 83.09 34.2 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 96.54 44.4 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.58 33.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 92.02 40.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 74.81 44.4 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 85.99 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 105.70 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.82 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 72.82 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 71.78 50.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 79.69 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 8.10 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.61 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.61 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1537 CRMSCA SECONDARY STRUCTURE . . 8.25 35 100.0 35 CRMSCA SURFACE . . . . . . . . 8.58 46 100.0 46 CRMSCA BURIED . . . . . . . . 8.75 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.73 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 8.29 174 100.0 174 CRMSMC SURFACE . . . . . . . . 8.73 228 100.0 228 CRMSMC BURIED . . . . . . . . 8.72 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.43 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 10.39 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 10.30 151 100.0 151 CRMSSC SURFACE . . . . . . . . 10.41 196 100.0 196 CRMSSC BURIED . . . . . . . . 10.53 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.55 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 9.29 291 100.0 291 CRMSALL SURFACE . . . . . . . . 9.56 380 100.0 380 CRMSALL BURIED . . . . . . . . 9.55 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.072 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 7.902 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 7.953 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 8.618 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.141 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 7.905 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 8.065 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 8.489 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.757 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 9.771 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 9.641 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 9.657 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 10.257 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.886 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 8.717 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 8.811 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 9.248 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 1 6 45 56 56 DISTCA CA (P) 0.00 1.79 1.79 10.71 80.36 56 DISTCA CA (RMS) 0.00 1.82 1.82 3.53 7.18 DISTCA ALL (N) 0 4 10 44 306 459 459 DISTALL ALL (P) 0.00 0.87 2.18 9.59 66.67 459 DISTALL ALL (RMS) 0.00 1.66 2.30 3.88 7.13 DISTALL END of the results output