####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS402_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS402_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 554 - 583 4.80 13.01 LCS_AVERAGE: 50.70 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 565 - 581 1.87 15.78 LONGEST_CONTINUOUS_SEGMENT: 17 586 - 602 1.48 8.61 LCS_AVERAGE: 25.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 567 - 581 0.78 13.79 LCS_AVERAGE: 19.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 11 13 30 4 10 11 11 11 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT S 555 S 555 11 13 30 4 10 11 11 11 14 17 20 21 23 25 31 34 36 40 43 45 46 49 50 LCS_GDT I 556 I 556 11 13 30 6 10 11 11 11 15 17 20 21 23 25 29 34 35 37 38 43 45 49 50 LCS_GDT L 557 L 557 11 13 30 6 10 11 11 11 19 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT D 558 D 558 11 13 30 8 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT T 559 T 559 11 13 30 6 10 11 11 11 15 21 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 560 L 560 11 13 30 6 10 11 11 11 15 17 20 21 28 32 34 36 39 42 43 45 46 49 50 LCS_GDT E 561 E 561 11 13 30 6 10 11 11 11 15 20 22 25 28 32 34 36 39 42 43 45 46 49 50 LCS_GDT D 562 D 562 11 13 30 5 10 11 11 11 15 17 20 21 23 26 31 36 39 42 43 45 46 49 50 LCS_GDT L 563 L 563 11 13 30 5 10 11 11 11 15 17 20 21 23 25 26 30 32 36 41 43 46 49 50 LCS_GDT D 564 D 564 11 13 30 5 10 11 11 11 12 17 20 21 23 25 31 34 38 41 43 45 46 49 50 LCS_GDT Y 565 Y 565 4 17 30 3 4 9 13 16 16 17 20 21 23 27 32 36 39 42 43 45 46 49 50 LCS_GDT D 566 D 566 4 17 30 3 4 4 8 10 15 17 20 21 23 28 32 36 39 42 43 45 46 49 50 LCS_GDT I 567 I 567 15 17 30 8 13 15 15 16 16 17 18 19 21 25 27 30 33 39 41 42 46 49 50 LCS_GDT H 568 H 568 15 17 30 6 13 15 15 16 16 17 18 19 22 25 26 27 29 36 38 40 44 45 47 LCS_GDT A 569 A 569 15 17 30 6 13 15 15 16 16 17 18 20 22 25 26 34 38 39 41 43 46 49 50 LCS_GDT I 570 I 570 15 17 30 6 13 15 15 16 16 17 18 23 26 30 34 36 39 42 43 45 46 49 50 LCS_GDT M 571 M 571 15 17 30 8 13 15 15 16 16 17 19 23 27 30 34 36 39 42 43 45 46 49 50 LCS_GDT D 572 D 572 15 17 30 8 13 15 15 16 16 17 19 23 27 30 34 36 39 42 43 45 46 49 50 LCS_GDT I 573 I 573 15 17 30 6 13 15 15 16 16 17 20 23 28 31 34 36 39 42 43 45 46 49 50 LCS_GDT L 574 L 574 15 17 30 8 13 15 15 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT N 575 N 575 15 17 30 8 13 15 15 16 16 21 23 26 28 32 34 36 39 42 43 45 46 49 50 LCS_GDT E 576 E 576 15 17 30 8 13 15 15 17 20 22 25 26 28 32 34 36 39 42 43 45 46 49 50 LCS_GDT R 577 R 577 15 17 30 8 13 15 15 16 16 17 22 26 29 32 32 35 39 42 43 45 46 49 50 LCS_GDT I 578 I 578 15 17 30 8 13 15 15 16 16 17 21 26 29 30 32 34 36 42 43 45 45 49 50 LCS_GDT S 579 S 579 15 17 30 5 13 15 15 16 16 17 20 26 29 32 32 34 39 42 43 45 46 49 50 LCS_GDT N 580 N 580 15 17 30 5 13 15 15 16 18 19 22 26 29 30 32 34 37 42 43 45 45 49 50 LCS_GDT S 581 S 581 15 17 30 5 13 15 15 16 16 17 21 22 23 25 26 32 33 34 37 38 44 47 47 LCS_GDT K 582 K 582 4 16 30 3 3 4 6 7 8 9 13 14 17 21 22 24 26 28 30 33 35 38 40 LCS_GDT L 583 L 583 4 8 30 3 5 5 6 7 8 8 10 11 14 16 18 18 22 23 27 29 31 36 38 LCS_GDT V 584 V 584 4 8 27 3 5 5 6 7 8 8 14 15 16 17 22 24 26 34 37 42 45 47 50 LCS_GDT N 585 N 585 4 8 27 3 5 5 6 7 8 10 13 19 23 24 31 33 37 42 43 45 46 49 50 LCS_GDT D 586 D 586 8 17 27 3 5 7 11 18 19 20 22 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT K 587 K 587 13 17 27 5 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT Q 588 Q 588 13 17 27 5 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT K 589 K 589 13 17 27 5 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT K 590 K 590 13 17 27 4 7 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT H 591 H 591 13 17 27 4 7 17 17 18 20 22 25 26 29 32 34 36 39 41 43 45 46 49 50 LCS_GDT I 592 I 592 13 17 27 8 11 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 593 L 593 13 17 27 8 11 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT G 594 G 594 13 17 27 8 11 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT E 595 E 595 13 17 27 8 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 596 L 596 13 17 27 8 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT Y 597 Y 597 13 17 27 8 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 598 L 598 13 17 27 8 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT F 599 F 599 13 17 27 7 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 600 L 600 12 17 27 7 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT N 601 N 601 12 17 27 7 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT D 602 D 602 12 17 27 7 12 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT N 603 N 603 4 13 27 3 3 4 5 6 10 12 15 23 28 32 34 36 39 42 43 45 46 49 50 LCS_GDT G 604 G 604 4 9 25 3 3 4 5 7 10 12 15 19 21 30 34 36 39 42 43 45 46 49 50 LCS_GDT Y 605 Y 605 3 5 25 3 3 3 6 14 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT L 606 L 606 3 4 25 3 3 3 15 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT K 607 K 607 3 4 25 3 3 3 5 10 14 22 25 26 29 32 34 36 39 42 43 45 46 49 50 LCS_GDT S 608 S 608 3 4 25 3 3 3 3 4 5 5 6 6 7 8 9 12 12 25 32 35 39 44 47 LCS_GDT I 609 I 609 0 4 25 0 0 3 3 4 5 5 6 6 7 8 9 12 12 23 32 34 39 41 42 LCS_AVERAGE LCS_A: 31.86 ( 19.23 25.64 50.70 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 13 17 17 18 20 22 25 26 29 32 34 36 39 42 43 45 46 49 50 GDT PERCENT_AT 14.29 23.21 30.36 30.36 32.14 35.71 39.29 44.64 46.43 51.79 57.14 60.71 64.29 69.64 75.00 76.79 80.36 82.14 87.50 89.29 GDT RMS_LOCAL 0.28 0.53 1.04 1.04 1.24 1.72 1.91 2.41 2.50 3.25 3.45 3.85 4.29 4.57 5.16 5.16 5.34 5.50 5.88 6.09 GDT RMS_ALL_AT 8.76 13.28 8.52 8.52 8.55 8.47 8.52 8.45 8.45 8.77 8.25 8.12 8.09 7.93 7.58 7.66 7.61 7.80 7.63 7.55 # Checking swapping # possible swapping detected: D 562 D 562 # possible swapping detected: D 564 D 564 # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 586 D 586 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 2.783 0 0.116 0.825 6.351 37.262 38.783 LGA S 555 S 555 6.191 0 0.055 0.784 7.324 29.762 23.175 LGA I 556 I 556 7.471 0 0.031 0.066 13.891 19.405 9.940 LGA L 557 L 557 3.283 0 0.044 1.290 7.396 61.190 41.726 LGA D 558 D 558 1.693 0 0.020 0.084 5.878 65.119 50.536 LGA T 559 T 559 4.368 0 0.035 0.043 7.964 35.357 27.347 LGA L 560 L 560 5.632 0 0.081 0.134 8.245 21.071 19.881 LGA E 561 E 561 6.375 0 0.000 0.816 12.810 13.452 7.989 LGA D 562 D 562 10.716 0 0.181 0.227 13.378 0.714 0.357 LGA L 563 L 563 12.917 0 0.117 1.175 14.656 0.000 0.000 LGA D 564 D 564 12.300 0 0.143 0.851 13.183 0.000 0.000 LGA Y 565 Y 565 12.646 0 0.539 0.380 14.923 0.000 0.000 LGA D 566 D 566 12.365 0 0.055 0.184 12.975 0.000 0.000 LGA I 567 I 567 15.054 0 0.578 0.594 19.514 0.000 0.000 LGA H 568 H 568 16.996 0 0.082 1.276 23.887 0.000 0.000 LGA A 569 A 569 15.347 0 0.050 0.054 17.021 0.000 0.000 LGA I 570 I 570 10.178 0 0.018 0.611 12.796 4.524 3.214 LGA M 571 M 571 8.516 0 0.018 0.748 16.024 7.143 3.571 LGA D 572 D 572 9.138 0 0.061 1.103 14.965 8.571 4.286 LGA I 573 I 573 7.375 0 0.006 1.559 10.293 17.381 9.405 LGA L 574 L 574 2.962 0 0.015 1.372 5.160 48.690 43.333 LGA N 575 N 575 4.306 0 0.062 0.928 8.996 45.119 26.548 LGA E 576 E 576 3.321 0 0.020 0.804 8.211 42.143 25.979 LGA R 577 R 577 6.988 0 0.039 1.257 16.130 13.333 5.498 LGA I 578 I 578 8.527 0 0.063 0.133 11.217 4.762 3.512 LGA S 579 S 579 7.290 0 0.043 0.043 9.354 6.548 10.794 LGA N 580 N 580 9.632 0 0.335 0.345 12.458 1.905 2.560 LGA S 581 S 581 14.603 0 0.013 0.017 16.092 0.000 0.000 LGA K 582 K 582 18.763 0 0.499 1.053 25.343 0.000 0.000 LGA L 583 L 583 18.247 0 0.149 0.807 19.333 0.000 0.000 LGA V 584 V 584 14.875 0 0.036 1.045 15.999 0.000 0.000 LGA N 585 N 585 10.118 0 0.068 1.213 12.046 1.429 1.131 LGA D 586 D 586 5.982 0 0.055 1.279 7.125 22.262 29.762 LGA K 587 K 587 1.793 0 0.364 1.826 8.069 69.286 57.143 LGA Q 588 Q 588 1.258 0 0.034 0.234 1.557 81.429 79.524 LGA K 589 K 589 1.237 0 0.057 0.124 3.764 81.429 68.201 LGA K 590 K 590 2.280 0 0.099 0.957 9.585 66.786 40.635 LGA H 591 H 591 2.378 0 0.024 0.066 3.881 62.857 56.714 LGA I 592 I 592 1.585 0 0.054 0.624 2.998 72.857 73.036 LGA L 593 L 593 1.561 0 0.000 0.290 2.265 72.857 71.845 LGA G 594 G 594 1.459 0 0.021 0.021 1.517 79.286 79.286 LGA E 595 E 595 1.431 0 0.154 0.818 4.514 79.286 63.757 LGA L 596 L 596 1.328 0 0.073 0.118 1.659 81.429 80.357 LGA Y 597 Y 597 1.325 0 0.197 1.100 8.557 77.262 49.762 LGA L 598 L 598 1.105 0 0.021 1.428 4.144 83.690 73.988 LGA F 599 F 599 1.019 0 0.107 1.236 6.226 81.548 58.615 LGA L 600 L 600 2.090 0 0.012 1.153 4.966 64.881 61.667 LGA N 601 N 601 1.959 0 0.150 0.971 5.182 68.810 58.274 LGA D 602 D 602 2.139 0 0.552 1.233 5.477 56.548 46.607 LGA N 603 N 603 6.427 0 0.220 0.867 9.075 22.262 12.619 LGA G 604 G 604 8.765 0 0.081 0.081 8.765 6.190 6.190 LGA Y 605 Y 605 4.132 0 0.601 1.328 5.400 57.024 47.976 LGA L 606 L 606 2.178 0 0.624 1.218 5.336 47.738 45.119 LGA K 607 K 607 4.267 0 0.134 1.202 8.650 27.619 33.228 LGA S 608 S 608 9.838 0 0.656 0.845 11.249 2.619 1.746 LGA I 609 I 609 11.038 0 0.587 1.414 12.735 0.000 1.250 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 7.423 7.309 8.250 33.051 27.801 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 25 2.41 43.750 39.390 0.996 LGA_LOCAL RMSD: 2.410 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.455 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 7.423 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.414623 * X + 0.187341 * Y + -0.890501 * Z + 18.285883 Y_new = 0.083630 * X + 0.966593 * Y + 0.242288 * Z + 92.304703 Z_new = 0.906142 * X + -0.174930 * Y + 0.385104 * Z + -51.368767 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.199030 -1.134073 -0.426375 [DEG: 11.4036 -64.9776 -24.4295 ] ZXZ: -1.836446 1.175475 1.761500 [DEG: -105.2206 67.3498 100.9265 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS402_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS402_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 25 2.41 39.390 7.42 REMARK ---------------------------------------------------------- MOLECULE T0547TS402_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT 1tuf_A 1hkv_A 2p3e_A 2qgh_A 1knw_A ATOM 8887 N GLN 554 -5.294 101.656 -27.035 1.00 0.50 N ATOM 8888 CA GLN 554 -5.927 102.244 -25.861 1.00 0.50 C ATOM 8889 C GLN 554 -5.193 103.500 -25.410 1.00 0.50 C ATOM 8890 O GLN 554 -4.010 103.453 -25.075 1.00 0.50 O ATOM 8891 CB GLN 554 -5.974 101.230 -24.713 1.00 0.50 C ATOM 8892 CG GLN 554 -6.798 99.988 -25.031 1.00 0.50 C ATOM 8893 CD GLN 554 -8.289 100.269 -25.070 1.00 0.50 C ATOM 8894 OE1 GLN 554 -8.821 100.989 -24.219 1.00 0.50 O ATOM 8895 NE2 GLN 554 -8.979 99.699 -26.053 1.00 0.50 N ATOM 8904 N SER 555 -5.902 104.624 -25.407 1.00 0.50 N ATOM 8905 CA SER 555 -5.318 105.897 -24.998 1.00 0.50 C ATOM 8906 C SER 555 -5.324 106.043 -23.482 1.00 0.50 C ATOM 8907 O SER 555 -5.970 105.269 -22.776 1.00 0.50 O ATOM 8908 CB SER 555 -6.080 107.062 -25.634 1.00 0.50 C ATOM 8909 OG SER 555 -5.960 107.022 -27.046 1.00 0.50 O ATOM 8915 N ILE 556 -4.599 107.040 -22.985 1.00 0.50 N ATOM 8916 CA ILE 556 -4.520 107.291 -21.552 1.00 0.50 C ATOM 8917 C ILE 556 -5.899 107.558 -20.962 1.00 0.50 C ATOM 8918 O ILE 556 -6.322 106.888 -20.020 1.00 0.50 O ATOM 8919 CB ILE 556 -3.589 108.487 -21.245 1.00 0.50 C ATOM 8920 CG1 ILE 556 -2.140 108.140 -21.607 1.00 0.50 C ATOM 8921 CG2 ILE 556 -3.697 108.892 -19.773 1.00 0.50 C ATOM 8922 CD1 ILE 556 -1.205 109.340 -21.616 1.00 0.50 C ATOM 8934 N LEU 557 -6.595 108.542 -21.521 1.00 0.50 N ATOM 8935 CA LEU 557 -7.928 108.900 -21.051 1.00 0.50 C ATOM 8936 C LEU 557 -8.945 107.824 -21.408 1.00 0.50 C ATOM 8937 O LEU 557 -9.778 107.446 -20.585 1.00 0.50 O ATOM 8938 CB LEU 557 -8.362 110.241 -21.654 1.00 0.50 C ATOM 8939 CG LEU 557 -7.563 111.470 -21.215 1.00 0.50 C ATOM 8940 CD1 LEU 557 -8.004 112.694 -22.007 1.00 0.50 C ATOM 8941 CD2 LEU 557 -7.745 111.708 -19.722 1.00 0.50 C ATOM 8953 N ASP 558 -8.873 107.335 -22.642 1.00 0.50 N ATOM 8954 CA ASP 558 -9.788 106.301 -23.110 1.00 0.50 C ATOM 8955 C ASP 558 -9.740 105.073 -22.211 1.00 0.50 C ATOM 8956 O ASP 558 -10.777 104.552 -21.798 1.00 0.50 O ATOM 8957 CB ASP 558 -9.455 105.906 -24.552 1.00 0.50 C ATOM 8958 CG ASP 558 -9.747 107.007 -25.553 1.00 0.50 C ATOM 8959 OD1 ASP 558 -10.866 107.563 -25.546 1.00 0.50 O ATOM 8960 OD2 ASP 558 -8.844 107.319 -26.363 1.00 0.50 O ATOM 8965 N THR 559 -8.531 104.613 -21.909 1.00 0.50 N ATOM 8966 CA THR 559 -8.346 103.445 -21.057 1.00 0.50 C ATOM 8967 C THR 559 -8.939 103.672 -19.673 1.00 0.50 C ATOM 8968 O THR 559 -9.676 102.833 -19.157 1.00 0.50 O ATOM 8969 CB THR 559 -6.849 103.088 -20.918 1.00 0.50 C ATOM 8970 OG1 THR 559 -6.329 102.766 -22.213 1.00 0.50 O ATOM 8971 CG2 THR 559 -6.651 101.899 -19.987 1.00 0.50 C ATOM 8979 N LEU 560 -8.611 104.813 -19.075 1.00 0.50 N ATOM 8980 CA LEU 560 -9.112 105.153 -17.748 1.00 0.50 C ATOM 8981 C LEU 560 -10.627 105.301 -17.751 1.00 0.50 C ATOM 8982 O LEU 560 -11.280 105.128 -16.723 1.00 0.50 O ATOM 8983 CB LEU 560 -8.467 106.453 -17.255 1.00 0.50 C ATOM 8984 CG LEU 560 -6.954 106.415 -17.027 1.00 0.50 C ATOM 8985 CD1 LEU 560 -6.369 107.816 -17.143 1.00 0.50 C ATOM 8986 CD2 LEU 560 -6.646 105.822 -15.658 1.00 0.50 C ATOM 8998 N GLU 561 -11.182 105.625 -18.914 1.00 0.50 N ATOM 8999 CA GLU 561 -12.623 105.797 -19.054 1.00 0.50 C ATOM 9000 C GLU 561 -13.382 104.697 -18.323 1.00 0.50 C ATOM 9001 O GLU 561 -14.381 104.959 -17.653 1.00 0.50 O ATOM 9002 CB GLU 561 -13.019 105.806 -20.534 1.00 0.50 C ATOM 9003 CG GLU 561 -14.468 106.207 -20.780 1.00 0.50 C ATOM 9004 CD GLU 561 -15.440 105.047 -20.665 1.00 0.50 C ATOM 9005 OE1 GLU 561 -15.008 103.877 -20.750 1.00 0.50 O ATOM 9006 OE2 GLU 561 -16.654 105.313 -20.499 1.00 0.50 O ATOM 9013 N ASP 562 -12.904 103.465 -18.458 1.00 0.50 N ATOM 9014 CA ASP 562 -13.538 102.322 -17.810 1.00 0.50 C ATOM 9015 C ASP 562 -13.664 102.541 -16.308 1.00 0.50 C ATOM 9016 O ASP 562 -14.757 102.455 -15.748 1.00 0.50 O ATOM 9017 CB ASP 562 -12.743 101.042 -18.088 1.00 0.50 C ATOM 9018 CG ASP 562 -12.879 100.554 -19.518 1.00 0.50 C ATOM 9019 OD1 ASP 562 -13.736 101.074 -20.264 1.00 0.50 O ATOM 9020 OD2 ASP 562 -12.119 99.636 -19.899 1.00 0.50 O ATOM 9025 N LEU 563 -12.540 102.823 -15.659 1.00 0.50 N ATOM 9026 CA LEU 563 -12.523 103.055 -14.220 1.00 0.50 C ATOM 9027 C LEU 563 -13.134 104.406 -13.872 1.00 0.50 C ATOM 9028 O LEU 563 -12.777 105.020 -12.867 1.00 0.50 O ATOM 9029 CB LEU 563 -11.086 102.986 -13.688 1.00 0.50 C ATOM 9030 CG LEU 563 -10.504 101.584 -13.492 1.00 0.50 C ATOM 9031 CD1 LEU 563 -11.447 100.737 -12.647 1.00 0.50 C ATOM 9032 CD2 LEU 563 -10.261 100.923 -14.842 1.00 0.50 C ATOM 9044 N ASP 564 -14.058 104.865 -14.710 1.00 0.50 N ATOM 9045 CA ASP 564 -14.721 106.145 -14.494 1.00 0.50 C ATOM 9046 C ASP 564 -15.682 106.074 -13.313 1.00 0.50 C ATOM 9047 O ASP 564 -16.897 106.172 -13.482 1.00 0.50 O ATOM 9048 CB ASP 564 -15.474 106.577 -15.756 1.00 0.50 C ATOM 9049 CG ASP 564 -14.572 106.723 -16.967 1.00 0.50 C ATOM 9050 OD1 ASP 564 -13.406 107.146 -16.817 1.00 0.50 O ATOM 9051 OD2 ASP 564 -15.038 106.412 -18.087 1.00 0.50 O ATOM 9056 N TYR 565 -15.129 105.903 -12.116 1.00 0.50 N ATOM 9057 CA TYR 565 -15.935 105.819 -10.904 1.00 0.50 C ATOM 9058 C TYR 565 -15.479 106.836 -9.867 1.00 0.50 C ATOM 9059 O TYR 565 -15.456 106.548 -8.670 1.00 0.50 O ATOM 9060 CB TYR 565 -15.861 104.406 -10.310 1.00 0.50 C ATOM 9061 CG TYR 565 -16.381 103.329 -11.239 1.00 0.50 C ATOM 9062 CD1 TYR 565 -15.503 102.490 -11.923 1.00 0.50 C ATOM 9063 CD2 TYR 565 -17.749 103.155 -11.431 1.00 0.50 C ATOM 9064 CE1 TYR 565 -15.977 101.501 -12.779 1.00 0.50 C ATOM 9065 CE2 TYR 565 -18.233 102.170 -12.285 1.00 0.50 C ATOM 9066 CZ TYR 565 -17.340 101.348 -12.954 1.00 0.50 C ATOM 9067 OH TYR 565 -17.817 100.371 -13.798 1.00 0.50 H ATOM 9077 N ASP 566 -15.114 108.026 -10.333 1.00 0.50 N ATOM 9078 CA ASP 566 -14.658 109.089 -9.445 1.00 0.50 C ATOM 9079 C ASP 566 -15.775 109.550 -8.519 1.00 0.50 C ATOM 9080 O ASP 566 -16.492 110.505 -8.822 1.00 0.50 O ATOM 9081 CB ASP 566 -14.130 110.274 -10.260 1.00 0.50 C ATOM 9082 CG ASP 566 -13.501 111.355 -9.400 1.00 0.50 C ATOM 9083 OD1 ASP 566 -13.376 111.166 -8.172 1.00 0.50 O ATOM 9084 OD2 ASP 566 -13.132 112.410 -9.964 1.00 0.50 O ATOM 9089 N ILE 567 -15.919 108.868 -7.388 1.00 0.50 N ATOM 9090 CA ILE 567 -16.950 109.206 -6.414 1.00 0.50 C ATOM 9091 C ILE 567 -16.599 110.486 -5.664 1.00 0.50 C ATOM 9092 O ILE 567 -15.437 110.887 -5.611 1.00 0.50 O ATOM 9093 CB ILE 567 -17.160 108.057 -5.401 1.00 0.50 C ATOM 9094 CG1 ILE 567 -17.750 106.829 -6.105 1.00 0.50 C ATOM 9095 CG2 ILE 567 -18.065 108.508 -4.252 1.00 0.50 C ATOM 9096 CD1 ILE 567 -17.717 105.564 -5.260 1.00 0.50 C ATOM 9108 N HIS 568 -17.612 111.124 -5.088 1.00 0.50 N ATOM 9109 CA HIS 568 -17.413 112.359 -4.339 1.00 0.50 C ATOM 9110 C HIS 568 -16.171 112.277 -3.462 1.00 0.50 C ATOM 9111 O HIS 568 -15.206 113.016 -3.665 1.00 0.50 O ATOM 9112 CB HIS 568 -18.642 112.663 -3.472 1.00 0.50 C ATOM 9113 CG HIS 568 -18.802 111.714 -2.323 1.00 0.50 C ATOM 9114 ND1 HIS 568 -19.228 110.413 -2.482 1.00 0.50 N ATOM 9115 CD2 HIS 568 -18.585 111.890 -0.994 1.00 0.50 C ATOM 9116 CE1 HIS 568 -19.267 109.827 -1.294 1.00 0.50 C ATOM 9117 NE2 HIS 568 -18.882 110.700 -0.377 1.00 0.50 N ATOM 9125 N ALA 569 -16.200 111.378 -2.485 1.00 0.50 N ATOM 9126 CA ALA 569 -15.076 111.199 -1.574 1.00 0.50 C ATOM 9127 C ALA 569 -13.779 110.964 -2.338 1.00 0.50 C ATOM 9128 O ALA 569 -12.742 111.539 -2.010 1.00 0.50 O ATOM 9129 CB ALA 569 -15.344 110.030 -0.629 1.00 0.50 C ATOM 9135 N ILE 570 -13.845 110.116 -3.359 1.00 0.50 N ATOM 9136 CA ILE 570 -12.675 109.804 -4.171 1.00 0.50 C ATOM 9137 C ILE 570 -11.998 111.073 -4.672 1.00 0.50 C ATOM 9138 O ILE 570 -10.777 111.208 -4.596 1.00 0.50 O ATOM 9139 CB ILE 570 -13.054 108.913 -5.378 1.00 0.50 C ATOM 9140 CG1 ILE 570 -13.579 107.557 -4.893 1.00 0.50 C ATOM 9141 CG2 ILE 570 -11.856 108.728 -6.311 1.00 0.50 C ATOM 9142 CD1 ILE 570 -12.556 106.750 -4.106 1.00 0.50 C ATOM 9154 N MET 571 -12.798 112.000 -5.187 1.00 0.50 N ATOM 9155 CA MET 571 -12.277 113.261 -5.702 1.00 0.50 C ATOM 9156 C MET 571 -11.307 113.900 -4.717 1.00 0.50 C ATOM 9157 O MET 571 -10.268 114.431 -5.110 1.00 0.50 O ATOM 9158 CB MET 571 -13.423 114.231 -6.005 1.00 0.50 C ATOM 9159 CG MET 571 -12.954 115.575 -6.544 1.00 0.50 C ATOM 9160 SD MET 571 -14.325 116.726 -6.804 1.00 0.50 S ATOM 9161 CE MET 571 -14.747 117.124 -5.113 1.00 0.50 C ATOM 9171 N ASP 572 -11.652 113.846 -3.435 1.00 0.50 N ATOM 9172 CA ASP 572 -10.811 114.420 -2.391 1.00 0.50 C ATOM 9173 C ASP 572 -9.488 113.675 -2.277 1.00 0.50 C ATOM 9174 O ASP 572 -8.422 114.287 -2.227 1.00 0.50 O ATOM 9175 CB ASP 572 -11.543 114.398 -1.046 1.00 0.50 C ATOM 9176 CG ASP 572 -12.671 115.409 -0.965 1.00 0.50 C ATOM 9177 OD1 ASP 572 -12.758 116.303 -1.833 1.00 0.50 O ATOM 9178 OD2 ASP 572 -13.481 115.309 -0.014 1.00 0.50 O ATOM 9183 N ILE 573 -9.564 112.348 -2.233 1.00 0.50 N ATOM 9184 CA ILE 573 -8.372 111.516 -2.123 1.00 0.50 C ATOM 9185 C ILE 573 -7.329 111.910 -3.161 1.00 0.50 C ATOM 9186 O ILE 573 -6.156 112.100 -2.836 1.00 0.50 O ATOM 9187 CB ILE 573 -8.720 110.018 -2.287 1.00 0.50 C ATOM 9188 CG1 ILE 573 -9.560 109.534 -1.099 1.00 0.50 C ATOM 9189 CG2 ILE 573 -7.448 109.180 -2.427 1.00 0.50 C ATOM 9190 CD1 ILE 573 -10.175 108.158 -1.302 1.00 0.50 C ATOM 9202 N LEU 574 -7.761 112.029 -4.412 1.00 0.50 N ATOM 9203 CA LEU 574 -6.864 112.400 -5.501 1.00 0.50 C ATOM 9204 C LEU 574 -6.309 113.805 -5.303 1.00 0.50 C ATOM 9205 O LEU 574 -5.127 114.054 -5.536 1.00 0.50 O ATOM 9206 CB LEU 574 -7.597 112.320 -6.844 1.00 0.50 C ATOM 9207 CG LEU 574 -6.782 112.697 -8.085 1.00 0.50 C ATOM 9208 CD1 LEU 574 -5.591 111.760 -8.235 1.00 0.50 C ATOM 9209 CD2 LEU 574 -7.662 112.642 -9.326 1.00 0.50 C ATOM 9221 N ASN 575 -7.170 114.721 -4.873 1.00 0.50 N ATOM 9222 CA ASN 575 -6.768 116.103 -4.643 1.00 0.50 C ATOM 9223 C ASN 575 -5.794 116.206 -3.476 1.00 0.50 C ATOM 9224 O ASN 575 -4.687 116.724 -3.624 1.00 0.50 O ATOM 9225 CB ASN 575 -7.998 116.983 -4.386 1.00 0.50 C ATOM 9226 CG ASN 575 -8.815 117.217 -5.642 1.00 0.50 C ATOM 9227 OD1 ASN 575 -8.330 117.016 -6.760 1.00 0.50 O ATOM 9228 ND2 ASN 575 -10.061 117.644 -5.472 1.00 0.50 N ATOM 9235 N GLU 576 -6.213 115.712 -2.317 1.00 0.50 N ATOM 9236 CA GLU 576 -5.378 115.748 -1.122 1.00 0.50 C ATOM 9237 C GLU 576 -3.959 115.286 -1.427 1.00 0.50 C ATOM 9238 O GLU 576 -2.987 115.922 -1.019 1.00 0.50 O ATOM 9239 CB GLU 576 -5.983 114.873 -0.020 1.00 0.50 C ATOM 9240 CG GLU 576 -5.183 114.875 1.275 1.00 0.50 C ATOM 9241 CD GLU 576 -5.814 114.038 2.373 1.00 0.50 C ATOM 9242 OE1 GLU 576 -6.904 113.466 2.156 1.00 0.50 O ATOM 9243 OE2 GLU 576 -5.212 113.960 3.472 1.00 0.50 O ATOM 9250 N ARG 577 -3.847 114.174 -2.145 1.00 0.50 N ATOM 9251 CA ARG 577 -2.546 113.624 -2.506 1.00 0.50 C ATOM 9252 C ARG 577 -1.819 114.529 -3.493 1.00 0.50 C ATOM 9253 O ARG 577 -0.589 114.569 -3.524 1.00 0.50 O ATOM 9254 CB ARG 577 -2.704 112.225 -3.107 1.00 0.50 C ATOM 9255 CG ARG 577 -1.381 111.522 -3.376 1.00 0.50 C ATOM 9256 CD ARG 577 -0.826 110.874 -2.115 1.00 0.50 C ATOM 9257 NE ARG 577 -1.614 109.714 -1.713 1.00 0.50 N ATOM 9258 CZ ARG 577 -1.535 109.112 -0.528 1.00 0.50 C ATOM 9259 NH1 ARG 577 -0.844 109.656 0.470 1.00 0.50 H ATOM 9260 NH2 ARG 577 -2.147 107.944 -0.343 1.00 0.50 H ATOM 9274 N ILE 578 -2.587 115.255 -4.299 1.00 0.50 N ATOM 9275 CA ILE 578 -2.018 116.161 -5.289 1.00 0.50 C ATOM 9276 C ILE 578 -1.152 117.225 -4.626 1.00 0.50 C ATOM 9277 O ILE 578 -0.160 117.675 -5.199 1.00 0.50 O ATOM 9278 CB ILE 578 -3.126 116.845 -6.122 1.00 0.50 C ATOM 9279 CG1 ILE 578 -3.838 115.816 -7.008 1.00 0.50 C ATOM 9280 CG2 ILE 578 -2.544 117.977 -6.970 1.00 0.50 C ATOM 9281 CD1 ILE 578 -5.108 116.341 -7.659 1.00 0.50 C ATOM 9293 N SER 579 -1.534 117.624 -3.419 1.00 0.50 N ATOM 9294 CA SER 579 -0.793 118.637 -2.676 1.00 0.50 C ATOM 9295 C SER 579 0.541 118.093 -2.182 1.00 0.50 C ATOM 9296 O SER 579 1.546 118.804 -2.169 1.00 0.50 O ATOM 9297 CB SER 579 -1.619 119.140 -1.489 1.00 0.50 C ATOM 9298 OG SER 579 -2.789 119.799 -1.943 1.00 0.50 O ATOM 9304 N ASN 580 0.543 116.829 -1.774 1.00 0.50 N ATOM 9305 CA ASN 580 1.754 116.185 -1.278 1.00 0.50 C ATOM 9306 C ASN 580 2.280 115.157 -2.271 1.00 0.50 C ATOM 9307 O ASN 580 2.311 113.961 -1.983 1.00 0.50 O ATOM 9308 CB ASN 580 1.489 115.523 0.079 1.00 0.50 C ATOM 9309 CG ASN 580 1.153 116.531 1.162 1.00 0.50 C ATOM 9310 OD1 ASN 580 1.997 117.345 1.551 1.00 0.50 O ATOM 9311 ND2 ASN 580 -0.076 116.487 1.658 1.00 0.50 N ATOM 9318 N SER 581 2.690 115.631 -3.443 1.00 0.50 N ATOM 9319 CA SER 581 3.215 114.754 -4.482 1.00 0.50 C ATOM 9320 C SER 581 2.240 114.633 -5.646 1.00 0.50 C ATOM 9321 O SER 581 1.031 114.521 -5.446 1.00 0.50 O ATOM 9322 CB SER 581 3.511 113.366 -3.908 1.00 0.50 C ATOM 9323 OG SER 581 3.942 112.486 -4.933 1.00 0.50 O ATOM 9329 N LYS 582 2.773 114.659 -6.863 1.00 0.50 N ATOM 9330 CA LYS 582 1.950 114.553 -8.062 1.00 0.50 C ATOM 9331 C LYS 582 0.859 113.504 -7.890 1.00 0.50 C ATOM 9332 O LYS 582 -0.308 113.837 -7.685 1.00 0.50 O ATOM 9333 CB LYS 582 2.817 114.207 -9.276 1.00 0.50 C ATOM 9334 CG LYS 582 2.061 114.227 -10.595 1.00 0.50 C ATOM 9335 CD LYS 582 2.997 114.006 -11.776 1.00 0.50 C ATOM 9336 CE LYS 582 2.236 113.946 -13.096 1.00 0.50 C ATOM 9337 NZ LYS 582 3.158 113.820 -14.260 1.00 0.50 N ATOM 9351 N LEU 583 1.245 112.236 -7.978 1.00 0.50 N ATOM 9352 CA LEU 583 0.300 111.136 -7.832 1.00 0.50 C ATOM 9353 C LEU 583 0.932 109.960 -7.097 1.00 0.50 C ATOM 9354 O LEU 583 0.527 108.812 -7.278 1.00 0.50 O ATOM 9355 CB LEU 583 -0.197 110.678 -9.208 1.00 0.50 C ATOM 9356 CG LEU 583 -1.654 110.215 -9.282 1.00 0.50 C ATOM 9357 CD1 LEU 583 -1.864 109.333 -10.505 1.00 0.50 C ATOM 9358 CD2 LEU 583 -2.030 109.462 -8.012 1.00 0.50 C ATOM 9370 N VAL 584 1.927 110.255 -6.267 1.00 0.50 N ATOM 9371 CA VAL 584 2.617 109.223 -5.503 1.00 0.50 C ATOM 9372 C VAL 584 2.319 109.347 -4.014 1.00 0.50 C ATOM 9373 O VAL 584 2.096 110.446 -3.507 1.00 0.50 O ATOM 9374 CB VAL 584 4.145 109.285 -5.727 1.00 0.50 C ATOM 9375 CG1 VAL 584 4.860 108.239 -4.879 1.00 0.50 C ATOM 9376 CG2 VAL 584 4.474 109.083 -7.202 1.00 0.50 C ATOM 9386 N ASN 585 2.314 108.214 -3.320 1.00 0.50 N ATOM 9387 CA ASN 585 2.043 108.195 -1.888 1.00 0.50 C ATOM 9388 C ASN 585 3.189 107.553 -1.118 1.00 0.50 C ATOM 9389 O ASN 585 3.941 106.746 -1.665 1.00 0.50 O ATOM 9390 CB ASN 585 0.731 107.454 -1.602 1.00 0.50 C ATOM 9391 CG ASN 585 -0.470 108.140 -2.224 1.00 0.50 C ATOM 9392 OD1 ASN 585 -0.904 109.200 -1.761 1.00 0.50 O ATOM 9393 ND2 ASN 585 -1.020 107.546 -3.275 1.00 0.50 N ATOM 9400 N ASP 586 3.319 107.917 0.153 1.00 0.50 N ATOM 9401 CA ASP 586 4.375 107.377 1.001 1.00 0.50 C ATOM 9402 C ASP 586 3.962 106.047 1.616 1.00 0.50 C ATOM 9403 O ASP 586 4.565 105.010 1.341 1.00 0.50 O ATOM 9404 CB ASP 586 4.736 108.375 2.105 1.00 0.50 C ATOM 9405 CG ASP 586 5.418 109.624 1.580 1.00 0.50 C ATOM 9406 OD1 ASP 586 6.381 109.512 0.792 1.00 0.50 O ATOM 9407 OD2 ASP 586 4.985 110.735 1.965 1.00 0.50 O ATOM 9412 N LYS 587 2.929 106.083 2.453 1.00 0.50 N ATOM 9413 CA LYS 587 2.434 104.879 3.110 1.00 0.50 C ATOM 9414 C LYS 587 1.279 104.263 2.331 1.00 0.50 C ATOM 9415 O LYS 587 1.410 103.957 1.146 1.00 0.50 O ATOM 9416 CB LYS 587 1.984 105.196 4.538 1.00 0.50 C ATOM 9417 CG LYS 587 3.127 105.565 5.474 1.00 0.50 C ATOM 9418 CD LYS 587 2.619 105.886 6.873 1.00 0.50 C ATOM 9419 CE LYS 587 3.761 106.230 7.822 1.00 0.50 C ATOM 9420 NZ LYS 587 3.262 106.588 9.180 1.00 0.50 N ATOM 9434 N GLN 588 0.147 104.082 3.004 1.00 0.50 N ATOM 9435 CA GLN 588 -1.033 103.501 2.377 1.00 0.50 C ATOM 9436 C GLN 588 -1.481 104.325 1.176 1.00 0.50 C ATOM 9437 O GLN 588 -1.919 103.778 0.164 1.00 0.50 O ATOM 9438 CB GLN 588 -2.179 103.391 3.388 1.00 0.50 C ATOM 9439 CG GLN 588 -1.949 102.330 4.457 1.00 0.50 C ATOM 9440 CD GLN 588 -3.040 102.315 5.512 1.00 0.50 C ATOM 9441 OE1 GLN 588 -3.939 103.163 5.506 1.00 0.50 O ATOM 9442 NE2 GLN 588 -2.971 101.357 6.431 1.00 0.50 N ATOM 9451 N LYS 589 -1.370 105.643 1.295 1.00 0.50 N ATOM 9452 CA LYS 589 -1.762 106.546 0.220 1.00 0.50 C ATOM 9453 C LYS 589 -1.371 105.985 -1.140 1.00 0.50 C ATOM 9454 O LYS 589 -2.171 105.985 -2.077 1.00 0.50 O ATOM 9455 CB LYS 589 -1.123 107.922 0.417 1.00 0.50 C ATOM 9456 CG LYS 589 -1.666 108.687 1.613 1.00 0.50 C ATOM 9457 CD LYS 589 -1.013 110.057 1.742 1.00 0.50 C ATOM 9458 CE LYS 589 -1.550 110.826 2.943 1.00 0.50 C ATOM 9459 NZ LYS 589 -0.900 112.161 3.080 1.00 0.50 N ATOM 9473 N LYS 590 -0.134 105.510 -1.245 1.00 0.50 N ATOM 9474 CA LYS 590 0.366 104.945 -2.494 1.00 0.50 C ATOM 9475 C LYS 590 -0.538 103.826 -2.994 1.00 0.50 C ATOM 9476 O LYS 590 -0.636 103.585 -4.197 1.00 0.50 O ATOM 9477 CB LYS 590 1.791 104.415 -2.309 1.00 0.50 C ATOM 9478 CG LYS 590 2.406 103.849 -3.579 1.00 0.50 C ATOM 9479 CD LYS 590 3.849 103.418 -3.355 1.00 0.50 C ATOM 9480 CE LYS 590 4.478 102.868 -4.629 1.00 0.50 C ATOM 9481 NZ LYS 590 5.891 102.447 -4.412 1.00 0.50 N ATOM 9495 N HIS 591 -1.196 103.144 -2.063 1.00 0.50 N ATOM 9496 CA HIS 591 -2.108 102.060 -2.409 1.00 0.50 C ATOM 9497 C HIS 591 -3.407 102.598 -2.995 1.00 0.50 C ATOM 9498 O HIS 591 -3.935 102.053 -3.964 1.00 0.50 O ATOM 9499 CB HIS 591 -2.413 101.202 -1.173 1.00 0.50 C ATOM 9500 CG HIS 591 -3.344 100.064 -1.460 1.00 0.50 C ATOM 9501 ND1 HIS 591 -2.970 98.960 -2.196 1.00 0.50 N ATOM 9502 CD2 HIS 591 -4.637 99.868 -1.098 1.00 0.50 C ATOM 9503 CE1 HIS 591 -4.000 98.130 -2.276 1.00 0.50 C ATOM 9504 NE2 HIS 591 -5.022 98.656 -1.620 1.00 0.50 N ATOM 9512 N ILE 592 -3.918 103.671 -2.402 1.00 0.50 N ATOM 9513 CA ILE 592 -5.128 104.317 -2.896 1.00 0.50 C ATOM 9514 C ILE 592 -4.893 104.962 -4.255 1.00 0.50 C ATOM 9515 O ILE 592 -5.558 104.628 -5.235 1.00 0.50 O ATOM 9516 CB ILE 592 -5.637 105.386 -1.900 1.00 0.50 C ATOM 9517 CG1 ILE 592 -6.101 104.723 -0.598 1.00 0.50 C ATOM 9518 CG2 ILE 592 -6.767 106.209 -2.520 1.00 0.50 C ATOM 9519 CD1 ILE 592 -6.358 105.705 0.534 1.00 0.50 C ATOM 9531 N LEU 593 -3.943 105.890 -4.307 1.00 0.50 N ATOM 9532 CA LEU 593 -3.595 106.562 -5.554 1.00 0.50 C ATOM 9533 C LEU 593 -2.967 105.591 -6.546 1.00 0.50 C ATOM 9534 O LEU 593 -3.346 105.553 -7.716 1.00 0.50 O ATOM 9535 CB LEU 593 -2.629 107.720 -5.281 1.00 0.50 C ATOM 9536 CG LEU 593 -3.210 108.927 -4.540 1.00 0.50 C ATOM 9537 CD1 LEU 593 -2.099 109.903 -4.176 1.00 0.50 C ATOM 9538 CD2 LEU 593 -4.261 109.613 -5.401 1.00 0.50 C ATOM 9550 N GLY 594 -2.002 104.810 -6.071 1.00 0.50 N ATOM 9551 CA GLY 594 -1.335 103.821 -6.910 1.00 0.50 C ATOM 9552 C GLY 594 -2.346 102.931 -7.622 1.00 0.50 C ATOM 9553 O GLY 594 -2.236 102.689 -8.823 1.00 0.50 O ATOM 9557 N GLU 595 -3.330 102.445 -6.873 1.00 0.50 N ATOM 9558 CA GLU 595 -4.331 101.535 -7.418 1.00 0.50 C ATOM 9559 C GLU 595 -5.259 102.256 -8.386 1.00 0.50 C ATOM 9560 O GLU 595 -5.822 101.643 -9.294 1.00 0.50 O ATOM 9561 CB GLU 595 -5.148 100.901 -6.288 1.00 0.50 C ATOM 9562 CG GLU 595 -6.183 99.894 -6.772 1.00 0.50 C ATOM 9563 CD GLU 595 -6.934 99.215 -5.640 1.00 0.50 C ATOM 9564 OE1 GLU 595 -6.684 99.538 -4.459 1.00 0.50 O ATOM 9565 OE2 GLU 595 -7.779 98.337 -5.940 1.00 0.50 O ATOM 9572 N LEU 596 -5.419 103.560 -8.186 1.00 0.50 N ATOM 9573 CA LEU 596 -6.255 104.372 -9.061 1.00 0.50 C ATOM 9574 C LEU 596 -5.694 104.414 -10.477 1.00 0.50 C ATOM 9575 O LEU 596 -6.392 104.097 -11.441 1.00 0.50 O ATOM 9576 CB LEU 596 -6.372 105.798 -8.509 1.00 0.50 C ATOM 9577 CG LEU 596 -7.201 106.780 -9.340 1.00 0.50 C ATOM 9578 CD1 LEU 596 -8.646 106.303 -9.430 1.00 0.50 C ATOM 9579 CD2 LEU 596 -7.138 108.172 -8.724 1.00 0.50 C ATOM 9591 N TYR 597 -4.431 104.807 -10.597 1.00 0.50 N ATOM 9592 CA TYR 597 -3.762 104.852 -11.890 1.00 0.50 C ATOM 9593 C TYR 597 -3.868 103.515 -12.612 1.00 0.50 C ATOM 9594 O TYR 597 -4.511 103.412 -13.657 1.00 0.50 O ATOM 9595 CB TYR 597 -2.284 105.231 -11.716 1.00 0.50 C ATOM 9596 CG TYR 597 -1.533 105.360 -13.023 1.00 0.50 C ATOM 9597 CD1 TYR 597 -2.200 105.682 -14.202 1.00 0.50 C ATOM 9598 CD2 TYR 597 -0.156 105.158 -13.074 1.00 0.50 C ATOM 9599 CE1 TYR 597 -1.513 105.798 -15.407 1.00 0.50 C ATOM 9600 CE2 TYR 597 0.542 105.272 -14.272 1.00 0.50 C ATOM 9601 CZ TYR 597 -0.144 105.593 -15.432 1.00 0.50 C ATOM 9602 OH TYR 597 0.543 105.707 -16.620 1.00 0.50 H ATOM 9612 N LEU 598 -3.231 102.493 -12.051 1.00 0.50 N ATOM 9613 CA LEU 598 -3.250 101.160 -12.642 1.00 0.50 C ATOM 9614 C LEU 598 -4.676 100.647 -12.799 1.00 0.50 C ATOM 9615 O LEU 598 -5.017 100.032 -13.809 1.00 0.50 O ATOM 9616 CB LEU 598 -2.441 100.185 -11.779 1.00 0.50 C ATOM 9617 CG LEU 598 -0.924 100.385 -11.774 1.00 0.50 C ATOM 9618 CD1 LEU 598 -0.279 99.478 -10.733 1.00 0.50 C ATOM 9619 CD2 LEU 598 -0.353 100.099 -13.156 1.00 0.50 C ATOM 9631 N PHE 599 -5.504 100.901 -11.792 1.00 0.50 N ATOM 9632 CA PHE 599 -6.872 100.396 -11.778 1.00 0.50 C ATOM 9633 C PHE 599 -7.616 100.788 -13.049 1.00 0.50 C ATOM 9634 O PHE 599 -8.214 99.943 -13.715 1.00 0.50 O ATOM 9635 CB PHE 599 -7.627 100.923 -10.551 1.00 0.50 C ATOM 9636 CG PHE 599 -9.076 100.504 -10.504 1.00 0.50 C ATOM 9637 CD1 PHE 599 -9.428 99.220 -10.107 1.00 0.50 C ATOM 9638 CD2 PHE 599 -10.080 101.398 -10.859 1.00 0.50 C ATOM 9639 CE1 PHE 599 -10.764 98.829 -10.064 1.00 0.50 C ATOM 9640 CE2 PHE 599 -11.419 101.017 -10.819 1.00 0.50 C ATOM 9641 CZ PHE 599 -11.760 99.731 -10.421 1.00 0.50 C ATOM 9651 N LEU 600 -7.577 102.074 -13.379 1.00 0.50 N ATOM 9652 CA LEU 600 -8.161 102.565 -14.620 1.00 0.50 C ATOM 9653 C LEU 600 -7.459 101.968 -15.833 1.00 0.50 C ATOM 9654 O LEU 600 -8.088 101.702 -16.858 1.00 0.50 O ATOM 9655 CB LEU 600 -8.078 104.095 -14.677 1.00 0.50 C ATOM 9656 CG LEU 600 -8.964 104.859 -13.688 1.00 0.50 C ATOM 9657 CD1 LEU 600 -8.644 106.346 -13.737 1.00 0.50 C ATOM 9658 CD2 LEU 600 -10.433 104.619 -14.011 1.00 0.50 C ATOM 9670 N ASN 601 -6.152 101.761 -15.711 1.00 0.50 N ATOM 9671 CA ASN 601 -5.350 101.258 -16.820 1.00 0.50 C ATOM 9672 C ASN 601 -5.787 99.856 -17.226 1.00 0.50 C ATOM 9673 O ASN 601 -5.399 99.355 -18.281 1.00 0.50 O ATOM 9674 CB ASN 601 -3.863 101.263 -16.449 1.00 0.50 C ATOM 9675 CG ASN 601 -2.964 101.032 -17.649 1.00 0.50 C ATOM 9676 OD1 ASN 601 -2.975 101.811 -18.607 1.00 0.50 O ATOM 9677 ND2 ASN 601 -2.179 99.963 -17.610 1.00 0.50 N ATOM 9684 N ASP 602 -6.595 99.227 -16.380 1.00 0.50 N ATOM 9685 CA ASP 602 -7.196 97.940 -16.710 1.00 0.50 C ATOM 9686 C ASP 602 -6.233 96.794 -16.424 1.00 0.50 C ATOM 9687 O ASP 602 -6.229 95.784 -17.128 1.00 0.50 O ATOM 9688 CB ASP 602 -7.623 97.910 -18.180 1.00 0.50 C ATOM 9689 CG ASP 602 -8.839 98.773 -18.465 1.00 0.50 C ATOM 9690 OD1 ASP 602 -9.503 99.230 -17.511 1.00 0.50 O ATOM 9691 OD2 ASP 602 -9.134 98.993 -19.661 1.00 0.50 O ATOM 9696 N ASN 603 -5.416 96.957 -15.389 1.00 0.50 N ATOM 9697 CA ASN 603 -4.486 95.914 -14.975 1.00 0.50 C ATOM 9698 C ASN 603 -5.214 94.605 -14.698 1.00 0.50 C ATOM 9699 O ASN 603 -5.953 94.490 -13.720 1.00 0.50 O ATOM 9700 CB ASN 603 -3.703 96.358 -13.734 1.00 0.50 C ATOM 9701 CG ASN 603 -2.581 95.399 -13.381 1.00 0.50 C ATOM 9702 OD1 ASN 603 -2.610 94.224 -13.761 1.00 0.50 O ATOM 9703 ND2 ASN 603 -1.584 95.888 -12.654 1.00 0.50 N ATOM 9710 N GLY 604 -5.001 93.620 -15.564 1.00 0.50 N ATOM 9711 CA GLY 604 -5.636 92.316 -15.413 1.00 0.50 C ATOM 9712 C GLY 604 -6.940 92.246 -16.198 1.00 0.50 C ATOM 9713 O GLY 604 -7.570 91.191 -16.279 1.00 0.50 O ATOM 9717 N TYR 605 -7.342 93.375 -16.771 1.00 0.50 N ATOM 9718 CA TYR 605 -8.573 93.443 -17.549 1.00 0.50 C ATOM 9719 C TYR 605 -9.799 93.347 -16.651 1.00 0.50 C ATOM 9720 O TYR 605 -10.773 94.076 -16.834 1.00 0.50 O ATOM 9721 CB TYR 605 -8.609 92.319 -18.594 1.00 0.50 C ATOM 9722 CG TYR 605 -9.865 92.313 -19.438 1.00 0.50 C ATOM 9723 CD1 TYR 605 -10.036 93.231 -20.470 1.00 0.50 C ATOM 9724 CD2 TYR 605 -10.879 91.390 -19.197 1.00 0.50 C ATOM 9725 CE1 TYR 605 -11.191 93.232 -21.247 1.00 0.50 C ATOM 9726 CE2 TYR 605 -12.037 91.381 -19.967 1.00 0.50 C ATOM 9727 CZ TYR 605 -12.185 92.304 -20.988 1.00 0.50 C ATOM 9728 OH TYR 605 -13.331 92.296 -21.752 1.00 0.50 H ATOM 9738 N LEU 606 -9.745 92.442 -15.680 1.00 0.50 N ATOM 9739 CA LEU 606 -10.852 92.248 -14.750 1.00 0.50 C ATOM 9740 C LEU 606 -10.454 92.638 -13.332 1.00 0.50 C ATOM 9741 O LEU 606 -11.241 93.236 -12.599 1.00 0.50 O ATOM 9742 CB LEU 606 -11.317 90.788 -14.773 1.00 0.50 C ATOM 9743 CG LEU 606 -11.861 90.272 -16.108 1.00 0.50 C ATOM 9744 CD1 LEU 606 -12.166 88.782 -16.009 1.00 0.50 C ATOM 9745 CD2 LEU 606 -13.111 91.047 -16.499 1.00 0.50 C ATOM 9757 N LYS 607 -9.230 92.292 -12.950 1.00 0.50 N ATOM 9758 CA LYS 607 -8.742 92.563 -11.604 1.00 0.50 C ATOM 9759 C LYS 607 -8.856 94.043 -11.263 1.00 0.50 C ATOM 9760 O LYS 607 -9.196 94.407 -10.137 1.00 0.50 O ATOM 9761 CB LYS 607 -7.288 92.108 -11.460 1.00 0.50 C ATOM 9762 CG LYS 607 -7.113 90.598 -11.463 1.00 0.50 C ATOM 9763 CD LYS 607 -5.648 90.206 -11.314 1.00 0.50 C ATOM 9764 CE LYS 607 -5.465 88.694 -11.340 1.00 0.50 C ATOM 9765 NZ LYS 607 -4.028 88.310 -11.230 1.00 0.50 N ATOM 9779 N SER 608 -8.569 94.894 -12.242 1.00 0.50 N ATOM 9780 CA SER 608 -8.622 96.337 -12.044 1.00 0.50 C ATOM 9781 C SER 608 -10.036 96.795 -11.706 1.00 0.50 C ATOM 9782 O SER 608 -10.228 97.843 -11.090 1.00 0.50 O ATOM 9783 CB SER 608 -8.128 97.066 -13.297 1.00 0.50 C ATOM 9784 OG SER 608 -9.012 96.843 -14.383 1.00 0.50 O ATOM 9790 N ILE 609 -11.022 96.003 -12.113 1.00 0.50 N ATOM 9791 CA ILE 609 -12.420 96.323 -11.850 1.00 0.50 C ATOM 9792 C ILE 609 -12.981 95.463 -10.726 1.00 0.50 C ATOM 9793 O ILE 609 -14.158 95.568 -10.379 1.00 0.50 O ATOM 9794 CB ILE 609 -13.284 96.137 -13.120 1.00 0.50 C ATOM 9795 CG1 ILE 609 -13.250 94.673 -13.576 1.00 0.50 C ATOM 9796 CG2 ILE 609 -12.804 97.063 -14.240 1.00 0.50 C ATOM 9797 CD1 ILE 609 -14.246 94.352 -14.679 1.00 0.50 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 55.39 74.5 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 24.91 91.4 70 100.0 70 ARMSMC SURFACE . . . . . . . . 58.83 70.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 36.05 95.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.39 45.3 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 75.57 46.2 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 67.93 54.5 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 79.88 41.9 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 59.08 60.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.70 46.8 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 68.16 53.3 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 75.44 51.6 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 81.33 42.1 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 72.41 66.7 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.74 33.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 87.51 30.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 76.40 33.3 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 76.95 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 97.47 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.90 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 83.90 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 60.25 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 91.84 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 8.12 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.42 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.42 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1325 CRMSCA SECONDARY STRUCTURE . . 6.31 35 100.0 35 CRMSCA SURFACE . . . . . . . . 7.64 46 100.0 46 CRMSCA BURIED . . . . . . . . 6.34 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.48 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 6.31 174 100.0 174 CRMSMC SURFACE . . . . . . . . 7.70 228 100.0 228 CRMSMC BURIED . . . . . . . . 6.33 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.07 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 8.86 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 8.47 151 100.0 151 CRMSSC SURFACE . . . . . . . . 9.33 196 100.0 196 CRMSSC BURIED . . . . . . . . 7.59 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.26 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 7.43 291 100.0 291 CRMSALL SURFACE . . . . . . . . 8.51 380 100.0 380 CRMSALL BURIED . . . . . . . . 6.90 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.117 0.822 0.411 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 5.281 0.808 0.404 35 100.0 35 ERRCA SURFACE . . . . . . . . 6.268 0.823 0.412 46 100.0 46 ERRCA BURIED . . . . . . . . 5.420 0.817 0.408 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.139 0.823 0.411 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 5.270 0.809 0.405 174 100.0 174 ERRMC SURFACE . . . . . . . . 6.316 0.825 0.413 228 100.0 228 ERRMC BURIED . . . . . . . . 5.334 0.811 0.406 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.513 0.849 0.424 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 7.327 0.846 0.423 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 7.113 0.845 0.423 151 100.0 151 ERRSC SURFACE . . . . . . . . 7.790 0.856 0.428 196 100.0 196 ERRSC BURIED . . . . . . . . 6.119 0.814 0.407 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.780 0.835 0.417 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 6.154 0.826 0.413 291 100.0 291 ERRALL SURFACE . . . . . . . . 7.012 0.840 0.420 380 100.0 380 ERRALL BURIED . . . . . . . . 5.663 0.811 0.406 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 10 19 46 56 56 DISTCA CA (P) 0.00 1.79 17.86 33.93 82.14 56 DISTCA CA (RMS) 0.00 1.82 2.38 3.49 5.74 DISTCA ALL (N) 0 8 58 138 369 459 459 DISTALL ALL (P) 0.00 1.74 12.64 30.07 80.39 459 DISTALL ALL (RMS) 0.00 1.79 2.37 3.55 6.19 DISTALL END of the results output