####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 483), selected 56 , name T0547TS380_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS380_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 554 - 583 5.00 13.06 LCS_AVERAGE: 46.43 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 565 - 581 1.89 15.85 LCS_AVERAGE: 21.84 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 567 - 581 0.78 13.97 LCS_AVERAGE: 17.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 11 12 30 5 9 11 11 13 14 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT S 555 S 555 11 12 30 4 9 11 11 11 16 17 19 20 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT I 556 I 556 11 12 30 5 9 11 11 11 16 17 19 20 23 25 28 32 35 35 38 41 45 47 49 LCS_GDT L 557 L 557 11 12 30 5 9 11 11 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT D 558 D 558 11 12 30 5 9 11 12 13 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT T 559 T 559 11 12 30 5 9 11 11 12 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT L 560 L 560 11 12 30 5 9 11 11 12 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT E 561 E 561 11 12 30 5 9 11 11 12 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT D 562 D 562 11 12 30 4 8 11 11 12 16 17 19 20 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT L 563 L 563 11 12 30 4 9 11 11 11 15 17 19 20 23 25 27 28 29 32 40 42 44 47 49 LCS_GDT D 564 D 564 11 12 30 4 7 11 11 11 12 13 17 18 23 25 27 28 34 38 41 44 45 47 49 LCS_GDT Y 565 Y 565 4 17 30 3 4 9 12 14 16 17 19 20 23 25 27 32 36 38 41 44 45 47 49 LCS_GDT D 566 D 566 4 17 30 3 4 6 8 12 16 17 19 20 23 25 27 32 36 38 41 44 45 47 49 LCS_GDT I 567 I 567 15 17 30 7 13 15 15 15 16 17 17 18 20 22 25 26 29 32 40 42 44 47 49 LCS_GDT H 568 H 568 15 17 30 7 13 15 15 15 16 17 17 18 21 23 25 26 28 30 32 42 44 44 49 LCS_GDT A 569 A 569 15 17 30 7 13 15 15 15 16 17 17 19 21 24 26 28 34 37 40 42 44 47 49 LCS_GDT I 570 I 570 15 17 30 7 13 15 15 15 16 17 17 19 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT M 571 M 571 15 17 30 7 13 15 15 15 16 17 17 19 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT D 572 D 572 15 17 30 7 13 15 15 15 16 17 17 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT I 573 I 573 15 17 30 6 13 15 15 15 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT L 574 L 574 15 17 30 7 13 15 15 15 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT N 575 N 575 15 17 30 7 13 15 15 15 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT E 576 E 576 15 17 30 7 13 15 15 15 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT R 577 R 577 15 17 30 7 13 15 15 15 16 17 19 20 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT I 578 I 578 15 17 30 7 13 15 15 15 16 17 19 20 23 25 29 32 35 38 41 44 45 47 49 LCS_GDT S 579 S 579 15 17 30 6 13 15 15 15 16 17 19 20 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT N 580 N 580 15 17 30 5 12 15 15 15 16 17 19 20 23 25 29 32 33 38 41 44 45 47 49 LCS_GDT S 581 S 581 15 17 30 5 12 15 15 15 16 17 17 19 21 23 27 28 30 31 35 38 40 44 47 LCS_GDT K 582 K 582 4 16 30 3 4 4 6 7 9 11 13 16 16 17 19 24 25 26 28 30 33 35 40 LCS_GDT L 583 L 583 5 8 30 3 4 5 6 7 8 9 12 13 15 17 17 17 19 24 27 29 30 34 36 LCS_GDT V 584 V 584 5 8 24 3 4 5 6 7 8 9 12 15 16 17 19 24 26 29 31 38 40 45 47 LCS_GDT N 585 N 585 5 8 22 3 4 5 6 7 11 14 15 18 19 22 24 28 33 38 41 44 45 47 49 LCS_GDT D 586 D 586 5 13 22 3 4 7 12 12 15 16 19 20 23 25 29 32 36 38 41 44 45 47 49 LCS_GDT K 587 K 587 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT Q 588 Q 588 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT K 589 K 589 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT K 590 K 590 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT H 591 H 591 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT I 592 I 592 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT L 593 L 593 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT G 594 G 594 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT E 595 E 595 11 13 22 5 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT L 596 L 596 11 13 22 9 10 11 12 13 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT Y 597 Y 597 11 13 22 3 6 11 12 12 15 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT L 598 L 598 4 13 22 3 4 4 5 7 8 9 15 17 21 23 28 32 36 38 41 44 45 47 49 LCS_GDT F 599 F 599 4 5 22 3 4 4 5 7 8 10 13 17 22 25 29 32 36 38 41 44 45 47 49 LCS_GDT L 600 L 600 4 5 22 3 4 4 5 8 14 16 19 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT N 601 N 601 3 5 22 3 3 4 5 5 8 10 16 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT D 602 D 602 3 5 22 3 3 4 4 5 8 10 14 20 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT N 603 N 603 3 5 21 3 3 4 5 5 7 9 10 10 13 16 21 28 30 38 41 44 45 47 49 LCS_GDT G 604 G 604 3 5 21 3 3 4 5 5 8 10 14 18 23 26 29 32 36 38 41 44 45 47 49 LCS_GDT Y 605 Y 605 3 5 21 3 3 4 4 4 5 5 12 16 17 25 29 32 36 38 41 44 45 47 49 LCS_GDT L 606 L 606 3 5 21 3 3 4 4 4 6 9 10 11 21 24 28 32 35 38 41 44 45 47 49 LCS_GDT K 607 K 607 3 5 21 3 3 4 4 4 7 10 16 20 23 25 29 32 35 35 40 43 45 47 49 LCS_GDT S 608 S 608 3 5 17 3 3 3 4 4 5 5 6 7 11 13 14 18 22 33 35 38 40 41 45 LCS_GDT I 609 I 609 3 5 14 3 3 3 4 4 5 5 6 6 9 13 14 16 19 21 29 30 39 40 41 LCS_AVERAGE LCS_A: 28.48 ( 17.16 21.84 46.43 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 15 15 15 16 17 19 20 23 26 29 32 36 38 41 44 45 47 49 GDT PERCENT_AT 16.07 23.21 26.79 26.79 26.79 28.57 30.36 33.93 35.71 41.07 46.43 51.79 57.14 64.29 67.86 73.21 78.57 80.36 83.93 87.50 GDT RMS_LOCAL 0.38 0.51 0.78 0.78 0.78 1.53 1.89 2.51 2.69 3.15 4.14 4.13 4.41 5.18 5.48 5.72 6.11 6.17 6.36 6.62 GDT RMS_ALL_AT 9.63 13.44 13.97 13.97 13.97 15.47 15.85 12.59 12.64 12.57 9.01 9.69 9.73 8.84 8.52 8.52 8.26 8.34 8.27 8.28 # Checking swapping # possible swapping detected: D 564 D 564 # possible swapping detected: D 566 D 566 # possible swapping detected: D 572 D 572 # possible swapping detected: E 595 E 595 # possible swapping detected: Y 597 Y 597 # possible swapping detected: F 599 F 599 # possible swapping detected: D 602 D 602 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 3.407 0 0.037 1.219 6.018 55.476 43.968 LGA S 555 S 555 2.624 0 0.174 0.527 3.535 67.143 60.317 LGA I 556 I 556 2.403 0 0.121 1.301 6.171 60.952 53.214 LGA L 557 L 557 3.502 0 0.059 1.309 6.908 50.238 41.607 LGA D 558 D 558 2.660 0 0.025 0.071 3.966 65.000 55.893 LGA T 559 T 559 1.269 0 0.030 1.111 3.074 79.286 73.333 LGA L 560 L 560 2.161 0 0.110 0.422 3.823 64.881 57.500 LGA E 561 E 561 1.864 0 0.044 0.375 3.678 75.000 62.804 LGA D 562 D 562 1.685 0 0.108 1.215 6.512 65.952 49.643 LGA L 563 L 563 3.611 0 0.038 1.408 7.468 42.857 36.012 LGA D 564 D 564 4.660 0 0.075 0.780 8.964 37.381 22.143 LGA Y 565 Y 565 2.509 0 0.229 0.346 8.174 52.619 35.278 LGA D 566 D 566 2.791 0 0.144 1.117 5.164 44.881 51.190 LGA I 567 I 567 9.183 0 0.624 1.745 15.051 5.595 2.798 LGA H 568 H 568 9.091 0 0.091 1.372 13.952 3.690 1.524 LGA A 569 A 569 7.642 0 0.080 0.103 8.263 10.595 9.429 LGA I 570 I 570 6.113 0 0.259 0.647 9.255 20.833 15.179 LGA M 571 M 571 6.187 0 0.028 0.740 10.181 24.405 14.524 LGA D 572 D 572 5.252 0 0.107 0.133 7.842 32.024 21.964 LGA I 573 I 573 3.000 0 0.045 1.296 4.355 59.524 54.048 LGA L 574 L 574 2.339 0 0.040 1.350 5.179 66.786 58.155 LGA N 575 N 575 3.003 0 0.024 0.984 5.810 61.190 47.976 LGA E 576 E 576 2.085 0 0.056 0.871 3.438 73.095 60.265 LGA R 577 R 577 0.901 0 0.044 1.650 7.237 81.786 60.779 LGA I 578 I 578 2.572 0 0.071 0.638 4.138 61.190 52.381 LGA S 579 S 579 0.981 0 0.056 0.070 3.429 72.024 69.683 LGA N 580 N 580 5.145 0 0.259 0.300 7.341 26.905 21.071 LGA S 581 S 581 6.519 0 0.193 0.751 8.391 12.262 16.984 LGA K 582 K 582 12.599 0 0.483 1.072 18.735 0.000 0.000 LGA L 583 L 583 13.376 0 0.059 1.461 17.449 0.000 0.000 LGA V 584 V 584 11.461 0 0.047 1.032 11.461 0.000 0.068 LGA N 585 N 585 13.748 0 0.146 0.847 15.807 0.000 0.000 LGA D 586 D 586 17.664 0 0.584 1.106 20.791 0.000 0.000 LGA K 587 K 587 22.300 0 0.302 0.677 29.590 0.000 0.000 LGA Q 588 Q 588 21.007 0 0.039 0.346 25.295 0.000 0.000 LGA K 589 K 589 15.297 0 0.000 0.811 17.207 0.000 0.000 LGA K 590 K 590 17.905 0 0.037 1.656 22.873 0.000 0.000 LGA H 591 H 591 21.326 0 0.021 0.115 27.088 0.000 0.000 LGA I 592 I 592 17.872 0 0.061 1.111 20.171 0.000 0.000 LGA L 593 L 593 14.334 0 0.026 0.330 15.554 0.000 0.000 LGA G 594 G 594 18.282 0 0.069 0.069 18.436 0.000 0.000 LGA E 595 E 595 19.281 0 0.224 1.274 24.321 0.000 0.000 LGA L 596 L 596 14.334 0 0.148 0.234 15.752 0.000 0.000 LGA Y 597 Y 597 14.607 0 0.193 1.313 21.052 0.000 0.000 LGA L 598 L 598 12.894 0 0.383 1.450 16.532 0.000 0.000 LGA F 599 F 599 6.939 0 0.050 0.891 8.991 14.881 13.160 LGA L 600 L 600 8.196 0 0.618 1.305 10.336 3.214 2.738 LGA N 601 N 601 14.258 0 0.625 1.350 18.043 0.000 0.000 LGA D 602 D 602 16.163 0 0.243 0.353 18.402 0.000 0.000 LGA N 603 N 603 16.845 0 0.477 0.942 22.365 0.000 0.000 LGA G 604 G 604 12.898 0 0.151 0.151 13.858 0.000 0.000 LGA Y 605 Y 605 11.739 0 0.682 1.251 13.173 0.000 0.040 LGA L 606 L 606 16.836 0 0.521 1.105 20.646 0.000 0.000 LGA K 607 K 607 23.601 0 0.135 1.545 27.286 0.000 0.000 LGA S 608 S 608 26.283 0 0.094 0.133 27.970 0.000 0.000 LGA I 609 I 609 29.999 0 0.326 0.855 32.078 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 8.077 8.011 9.129 24.851 20.815 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 19 2.51 39.286 33.703 0.728 LGA_LOCAL RMSD: 2.508 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.587 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 8.077 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.649754 * X + 0.578962 * Y + 0.492567 * Z + -152.383453 Y_new = 0.324603 * X + -0.797268 * Y + 0.508918 * Z + 90.715775 Z_new = 0.687352 * X + -0.170783 * Y + -0.705961 * Z + -20.006519 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.463310 -0.757837 -2.904237 [DEG: 26.5457 -43.4209 -166.4005 ] ZXZ: 2.372519 2.354575 1.814330 [DEG: 135.9353 134.9072 103.9534 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS380_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS380_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 19 2.51 33.703 8.08 REMARK ---------------------------------------------------------- MOLECULE T0547TS380_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REMARK PARENT 1twi_A 1tuf_A 2j66_A ATOM 8128 N GLN 554 -11.108 98.791 -26.291 1.00 0.00 N ATOM 8129 H GLN 554 -11.841 98.105 -26.229 1.00 0.00 H ATOM 8130 CA GLN 554 -11.018 99.913 -25.390 1.00 0.00 C ATOM 8131 HA GLN 554 -10.677 100.779 -25.954 1.00 0.00 H ATOM 8132 CB GLN 554 -12.397 100.236 -24.834 1.00 0.00 C ATOM 8133 HB1 GLN 554 -12.333 101.006 -24.097 1.00 0.00 H ATOM 8134 HB2 GLN 554 -12.828 99.440 -24.325 1.00 0.00 H ATOM 8135 CG GLN 554 -13.530 100.351 -25.824 1.00 0.00 C ATOM 8136 HG1 GLN 554 -14.469 100.490 -25.329 1.00 0.00 H ATOM 8137 HG2 GLN 554 -13.591 99.466 -26.423 1.00 0.00 H ATOM 8138 CD GLN 554 -13.396 101.373 -26.841 1.00 0.00 C ATOM 8139 OE1 GLN 554 -12.352 101.521 -27.423 1.00 0.00 O ATOM 8140 NE2 GLN 554 -14.481 102.053 -27.068 1.00 0.00 N ATOM 8141 HE21 GLN 554 -15.332 101.921 -26.560 1.00 0.00 H ATOM 8142 HE22 GLN 554 -14.224 102.987 -27.391 1.00 0.00 H ATOM 8143 C GLN 554 -9.924 99.651 -24.359 1.00 0.00 C ATOM 8144 O GLN 554 -9.652 98.503 -23.991 1.00 0.00 O ATOM 8145 N SER 555 -9.319 100.698 -23.833 1.00 0.00 N ATOM 8146 H SER 555 -9.646 101.626 -24.123 1.00 0.00 H ATOM 8147 CA SER 555 -8.246 100.528 -22.839 1.00 0.00 C ATOM 8148 HA SER 555 -8.131 99.501 -22.559 1.00 0.00 H ATOM 8149 CB SER 555 -6.949 101.162 -23.384 1.00 0.00 C ATOM 8150 HB1 SER 555 -7.154 102.162 -23.766 1.00 0.00 H ATOM 8151 HB2 SER 555 -6.589 100.571 -24.206 1.00 0.00 H ATOM 8152 OG SER 555 -5.976 101.304 -22.349 1.00 0.00 O ATOM 8153 HG SER 555 -5.175 101.666 -22.736 1.00 0.00 H ATOM 8154 C SER 555 -8.436 101.173 -21.585 1.00 0.00 C ATOM 8155 O SER 555 -8.666 102.249 -21.805 1.00 0.00 O ATOM 8156 N ILE 556 -8.140 100.834 -20.347 1.00 0.00 N ATOM 8157 H ILE 556 -7.726 99.938 -20.222 1.00 0.00 H ATOM 8158 CA ILE 556 -8.173 101.810 -19.220 1.00 0.00 C ATOM 8159 HA ILE 556 -9.145 101.756 -18.772 1.00 0.00 H ATOM 8160 CB ILE 556 -7.183 101.471 -18.138 1.00 0.00 C ATOM 8161 HB ILE 556 -7.323 100.415 -17.950 1.00 0.00 H ATOM 8162 CG2 ILE 556 -5.761 101.736 -18.655 1.00 0.00 C ATOM 8163 HG21 ILE 556 -5.050 101.415 -17.914 1.00 0.00 H ATOM 8164 HG22 ILE 556 -5.620 101.212 -19.604 1.00 0.00 H ATOM 8165 HG23 ILE 556 -5.584 102.802 -18.792 1.00 0.00 H ATOM 8166 CG1 ILE 556 -7.452 102.264 -16.840 1.00 0.00 C ATOM 8167 HG12 ILE 556 -7.358 103.340 -16.969 1.00 0.00 H ATOM 8168 HG13 ILE 556 -6.690 102.006 -16.119 1.00 0.00 H ATOM 8169 CD1 ILE 556 -8.834 101.957 -16.260 1.00 0.00 C ATOM 8170 HD1 ILE 556 -8.943 102.507 -15.348 1.00 0.00 H ATOM 8171 HD2 ILE 556 -9.645 102.291 -16.901 1.00 0.00 H ATOM 8172 HD3 ILE 556 -8.915 100.894 -16.051 1.00 0.00 H ATOM 8173 C ILE 556 -7.868 103.224 -19.541 1.00 0.00 C ATOM 8174 O ILE 556 -8.515 103.959 -18.865 1.00 0.00 O ATOM 8175 N LEU 557 -6.517 103.288 -20.662 1.00 0.00 N ATOM 8176 CA LEU 557 -6.347 104.670 -20.998 1.00 0.00 C ATOM 8177 CB LEU 557 -4.915 104.964 -21.481 1.00 0.00 C ATOM 8178 CG LEU 557 -4.590 106.457 -21.666 1.00 0.00 C ATOM 8179 CD1 LEU 557 -5.332 107.077 -22.863 1.00 0.00 C ATOM 8180 CD2 LEU 557 -4.820 107.229 -20.357 1.00 0.00 C ATOM 8181 C LEU 557 -7.316 105.046 -22.082 1.00 0.00 C ATOM 8182 O LEU 557 -7.901 106.128 -22.054 1.00 0.00 O ATOM 8183 N ASP 558 -7.531 104.141 -23.059 1.00 0.00 N ATOM 8184 CA ASP 558 -8.339 104.434 -24.210 1.00 0.00 C ATOM 8185 CB ASP 558 -8.461 103.239 -25.171 1.00 0.00 C ATOM 8186 CG ASP 558 -7.118 103.034 -25.857 1.00 0.00 C ATOM 8187 OD1 ASP 558 -6.459 104.058 -26.183 1.00 0.00 O ATOM 8188 OD2 ASP 558 -6.732 101.853 -26.058 1.00 0.00 O ATOM 8189 C ASP 558 -9.733 104.797 -23.796 1.00 0.00 C ATOM 8190 O ASP 558 -10.318 105.724 -24.348 1.00 0.00 O ATOM 8191 N THR 559 -10.304 104.071 -22.818 1.00 0.00 N ATOM 8192 CA THR 559 -11.663 104.281 -22.404 1.00 0.00 C ATOM 8193 CB THR 559 -12.111 103.274 -21.388 1.00 0.00 C ATOM 8194 OG1 THR 559 -11.295 103.356 -20.229 1.00 0.00 O ATOM 8195 CG2 THR 559 -12.026 101.869 -22.007 1.00 0.00 C ATOM 8196 C THR 559 -11.874 105.648 -21.800 1.00 0.00 C ATOM 8197 O THR 559 -12.835 106.336 -22.129 1.00 0.00 O ATOM 8198 N LEU 560 -10.975 106.071 -20.895 1.00 0.00 N ATOM 8199 CA LEU 560 -11.019 107.300 -20.147 1.00 0.00 C ATOM 8200 CB LEU 560 -9.922 107.387 -19.079 1.00 0.00 C ATOM 8201 CG LEU 560 -9.881 106.183 -18.127 1.00 0.00 C ATOM 8202 CD1 LEU 560 -9.038 106.505 -16.889 1.00 0.00 C ATOM 8203 CD2 LEU 560 -11.281 105.644 -17.802 1.00 0.00 C ATOM 8204 C LEU 560 -10.801 108.489 -21.038 1.00 0.00 C ATOM 8205 O LEU 560 -11.135 109.610 -20.667 1.00 0.00 O ATOM 8206 N GLU 561 -10.170 108.300 -22.206 1.00 0.00 N ATOM 8207 CA GLU 561 -9.755 109.396 -23.038 1.00 0.00 C ATOM 8208 CB GLU 561 -9.021 108.944 -24.301 1.00 0.00 C ATOM 8209 CG GLU 561 -8.588 110.125 -25.167 1.00 0.00 C ATOM 8210 CD GLU 561 -7.702 109.563 -26.255 1.00 0.00 C ATOM 8211 OE1 GLU 561 -6.981 108.577 -25.951 1.00 0.00 O ATOM 8212 OE2 GLU 561 -7.729 110.098 -27.395 1.00 0.00 O ATOM 8213 C GLU 561 -10.868 110.303 -23.498 1.00 0.00 C ATOM 8214 O GLU 561 -10.684 111.518 -23.512 1.00 0.00 O ATOM 8215 N ASP 562 -12.037 109.775 -23.912 1.00 0.00 N ATOM 8216 CA ASP 562 -13.084 110.619 -24.446 1.00 0.00 C ATOM 8217 CB ASP 562 -14.278 109.814 -24.995 1.00 0.00 C ATOM 8218 CG ASP 562 -14.874 109.004 -23.853 1.00 0.00 C ATOM 8219 OD1 ASP 562 -14.232 108.002 -23.440 1.00 0.00 O ATOM 8220 OD2 ASP 562 -15.967 109.392 -23.362 1.00 0.00 O ATOM 8221 C ASP 562 -13.617 111.557 -23.398 1.00 0.00 C ATOM 8222 O ASP 562 -13.888 112.731 -23.642 1.00 0.00 O ATOM 8223 N LEU 563 -13.750 110.995 -22.201 1.00 0.00 N ATOM 8224 CA LEU 563 -14.233 111.392 -20.918 1.00 0.00 C ATOM 8225 CB LEU 563 -14.268 110.150 -20.030 1.00 0.00 C ATOM 8226 CG LEU 563 -14.699 110.371 -18.587 1.00 0.00 C ATOM 8227 CD1 LEU 563 -16.165 110.818 -18.498 1.00 0.00 C ATOM 8228 CD2 LEU 563 -14.365 109.110 -17.782 1.00 0.00 C ATOM 8229 C LEU 563 -13.303 112.359 -20.295 1.00 0.00 C ATOM 8230 O LEU 563 -13.568 112.802 -19.183 1.00 0.00 O ATOM 8231 N ASP 564 -12.189 112.652 -20.987 1.00 0.00 N ATOM 8232 CA ASP 564 -11.021 113.384 -20.598 1.00 0.00 C ATOM 8233 CB ASP 564 -9.944 113.436 -21.697 1.00 0.00 C ATOM 8234 CG ASP 564 -8.596 113.747 -21.053 1.00 0.00 C ATOM 8235 OD1 ASP 564 -8.563 114.062 -19.833 1.00 0.00 O ATOM 8236 OD2 ASP 564 -7.573 113.653 -21.784 1.00 0.00 O ATOM 8237 C ASP 564 -11.349 114.789 -20.172 1.00 0.00 C ATOM 8238 O ASP 564 -10.483 115.655 -20.262 1.00 0.00 O ATOM 8239 N TYR 565 -12.623 115.079 -19.806 1.00 0.00 N ATOM 8240 CA TYR 565 -13.013 116.378 -19.374 1.00 0.00 C ATOM 8241 CB TYR 565 -14.531 116.595 -19.322 1.00 0.00 C ATOM 8242 CG TYR 565 -15.027 116.346 -20.701 1.00 0.00 C ATOM 8243 CD1 TYR 565 -14.760 117.244 -21.704 1.00 0.00 C ATOM 8244 CD2 TYR 565 -15.718 115.195 -21.001 1.00 0.00 C ATOM 8245 CE1 TYR 565 -15.206 117.013 -22.983 1.00 0.00 C ATOM 8246 CE2 TYR 565 -16.167 114.960 -22.279 1.00 0.00 C ATOM 8247 CZ TYR 565 -15.914 115.872 -23.272 1.00 0.00 C ATOM 8248 OH TYR 565 -16.374 115.636 -24.584 1.00 0.00 H ATOM 8249 C TYR 565 -12.486 116.616 -18.001 1.00 0.00 C ATOM 8250 O TYR 565 -12.994 116.131 -16.988 1.00 0.00 O ATOM 8251 N ASP 566 -11.390 117.389 -17.973 1.00 0.00 N ATOM 8252 CA ASP 566 -10.749 117.793 -16.770 1.00 0.00 C ATOM 8253 CB ASP 566 -9.226 117.560 -16.788 1.00 0.00 C ATOM 8254 CG ASP 566 -8.663 117.838 -15.402 1.00 0.00 C ATOM 8255 OD1 ASP 566 -9.380 118.476 -14.584 1.00 0.00 O ATOM 8256 OD2 ASP 566 -7.503 117.420 -15.144 1.00 0.00 O ATOM 8257 C ASP 566 -10.985 119.261 -16.675 1.00 0.00 C ATOM 8258 O ASP 566 -10.562 120.025 -17.541 1.00 0.00 O ATOM 8259 N ILE 567 -11.696 119.695 -15.622 1.00 0.00 N ATOM 8260 CA ILE 567 -11.901 121.099 -15.453 1.00 0.00 C ATOM 8261 CB ILE 567 -13.348 121.499 -15.290 1.00 0.00 C ATOM 8262 CG2 ILE 567 -14.061 121.141 -16.604 1.00 0.00 C ATOM 8263 CG1 ILE 567 -14.007 120.875 -14.054 1.00 0.00 C ATOM 8264 CD1 ILE 567 -13.669 121.594 -12.759 1.00 0.00 C ATOM 8265 C ILE 567 -11.071 121.440 -14.263 1.00 0.00 C ATOM 8266 O ILE 567 -10.719 120.558 -13.486 1.00 0.00 O ATOM 8267 N HIS 568 -10.695 122.719 -14.100 1.00 0.00 N ATOM 8268 CA HIS 568 -9.723 123.051 -13.101 1.00 0.00 C ATOM 8269 ND1 HIS 568 -11.237 125.949 -13.877 1.00 0.00 N ATOM 8270 CG HIS 568 -10.361 125.535 -12.901 1.00 0.00 C ATOM 8271 CB HIS 568 -9.275 124.528 -13.119 1.00 0.00 C ATOM 8272 NE2 HIS 568 -11.746 127.093 -12.038 1.00 0.00 N ATOM 8273 CD2 HIS 568 -10.685 126.243 -11.783 1.00 0.00 C ATOM 8274 CE1 HIS 568 -12.044 126.883 -13.308 1.00 0.00 C ATOM 8275 C HIS 568 -10.180 122.675 -11.723 1.00 0.00 C ATOM 8276 O HIS 568 -9.351 122.340 -10.881 1.00 0.00 O ATOM 8277 N ALA 569 -11.488 122.773 -11.429 1.00 0.00 N ATOM 8278 CA ALA 569 -12.025 122.431 -10.136 1.00 0.00 C ATOM 8279 CB ALA 569 -13.506 122.829 -9.994 1.00 0.00 C ATOM 8280 C ALA 569 -11.924 120.958 -9.831 1.00 0.00 C ATOM 8281 O ALA 569 -11.648 120.578 -8.698 1.00 0.00 O ATOM 8282 N ILE 570 -12.224 120.113 -10.835 1.00 0.00 N ATOM 8283 CA ILE 570 -12.292 118.673 -10.909 1.00 0.00 C ATOM 8284 CB ILE 570 -13.214 118.220 -12.014 1.00 0.00 C ATOM 8285 CG2 ILE 570 -13.460 116.697 -11.942 1.00 0.00 C ATOM 8286 CG1 ILE 570 -14.550 118.950 -11.811 1.00 0.00 C ATOM 8287 CD1 ILE 570 -15.218 118.630 -10.474 1.00 0.00 C ATOM 8288 C ILE 570 -10.943 118.015 -10.950 1.00 0.00 C ATOM 8289 O ILE 570 -10.859 116.814 -11.188 1.00 0.00 O ATOM 8290 N MET 571 -9.867 118.802 -11.105 1.00 0.00 N ATOM 8291 CA MET 571 -8.549 118.270 -10.887 1.00 0.00 C ATOM 8292 CB MET 571 -7.449 119.232 -11.367 1.00 0.00 C ATOM 8293 CG MET 571 -6.034 118.659 -11.267 1.00 0.00 C ATOM 8294 SD MET 571 -4.734 119.737 -11.944 1.00 0.00 S ATOM 8295 CE MET 571 -4.840 120.979 -10.623 1.00 0.00 C ATOM 8296 C MET 571 -8.385 118.083 -9.402 1.00 0.00 C ATOM 8297 O MET 571 -7.817 117.095 -8.934 1.00 0.00 O ATOM 8298 N ASP 572 -8.907 119.062 -8.634 1.00 0.00 N ATOM 8299 CA ASP 572 -8.821 119.156 -7.202 1.00 0.00 C ATOM 8300 CB ASP 572 -9.442 120.452 -6.652 1.00 0.00 C ATOM 8301 CG ASP 572 -8.574 121.628 -7.076 1.00 0.00 C ATOM 8302 OD1 ASP 572 -7.440 121.386 -7.564 1.00 0.00 O ATOM 8303 OD2 ASP 572 -9.040 122.788 -6.913 1.00 0.00 O ATOM 8304 C ASP 572 -9.563 118.034 -6.561 1.00 0.00 C ATOM 8305 O ASP 572 -9.131 117.510 -5.535 1.00 0.00 O ATOM 8306 N ILE 573 -10.720 117.657 -7.129 1.00 0.00 N ATOM 8307 CA ILE 573 -11.508 116.601 -6.578 1.00 0.00 C ATOM 8308 CB ILE 573 -12.765 116.364 -7.373 1.00 0.00 C ATOM 8309 CG2 ILE 573 -13.456 115.112 -6.809 1.00 0.00 C ATOM 8310 CG1 ILE 573 -13.658 117.615 -7.361 1.00 0.00 C ATOM 8311 CD1 ILE 573 -14.124 118.017 -5.961 1.00 0.00 C ATOM 8312 C ILE 573 -10.691 115.358 -6.656 1.00 0.00 C ATOM 8313 O ILE 573 -10.598 114.586 -5.704 1.00 0.00 O ATOM 8314 N LEU 574 -10.048 115.149 -7.812 1.00 0.00 N ATOM 8315 CA LEU 574 -9.297 113.955 -8.011 1.00 0.00 C ATOM 8316 CB LEU 574 -8.766 113.827 -9.445 1.00 0.00 C ATOM 8317 CG LEU 574 -8.225 112.422 -9.738 1.00 0.00 C ATOM 8318 CD1 LEU 574 -9.357 111.393 -9.603 1.00 0.00 C ATOM 8319 CD2 LEU 574 -7.518 112.357 -11.101 1.00 0.00 C ATOM 8320 C LEU 574 -8.134 113.940 -7.064 1.00 0.00 C ATOM 8321 O LEU 574 -7.785 112.884 -6.551 1.00 0.00 O ATOM 8322 N ASN 575 -7.478 115.099 -6.850 1.00 0.00 N ATOM 8323 CA ASN 575 -6.322 115.225 -6.004 1.00 0.00 C ATOM 8324 CB ASN 575 -5.572 116.545 -6.227 1.00 0.00 C ATOM 8325 CG ASN 575 -4.901 116.451 -7.589 1.00 0.00 C ATOM 8326 OD1 ASN 575 -4.390 115.397 -7.963 1.00 0.00 O ATOM 8327 ND2 ASN 575 -4.908 117.577 -8.353 1.00 0.00 N ATOM 8328 C ASN 575 -6.635 115.131 -4.540 1.00 0.00 C ATOM 8329 O ASN 575 -5.897 114.489 -3.797 1.00 0.00 O ATOM 8330 N GLU 576 -7.718 115.782 -4.075 1.00 0.00 N ATOM 8331 CA GLU 576 -8.032 115.799 -2.678 1.00 0.00 C ATOM 8332 CB GLU 576 -9.263 116.660 -2.338 1.00 0.00 C ATOM 8333 CG GLU 576 -9.511 116.780 -0.833 1.00 0.00 C ATOM 8334 CD GLU 576 -10.654 117.759 -0.599 1.00 0.00 C ATOM 8335 OE1 GLU 576 -11.509 117.911 -1.510 1.00 0.00 O ATOM 8336 OE2 GLU 576 -10.683 118.368 0.504 1.00 0.00 O ATOM 8337 C GLU 576 -8.320 114.406 -2.222 1.00 0.00 C ATOM 8338 O GLU 576 -7.913 114.005 -1.133 1.00 0.00 O ATOM 8339 N ARG 577 -9.053 113.643 -3.054 1.00 0.00 N ATOM 8340 CA ARG 577 -9.433 112.283 -2.775 1.00 0.00 C ATOM 8341 CB ARG 577 -10.361 111.649 -3.828 1.00 0.00 C ATOM 8342 CG ARG 577 -11.709 112.344 -4.029 1.00 0.00 C ATOM 8343 CD ARG 577 -11.966 113.535 -3.107 1.00 0.00 C ATOM 8344 NE ARG 577 -11.963 113.083 -1.690 1.00 0.00 N ATOM 8345 CZ ARG 577 -12.046 114.035 -0.717 1.00 0.00 C ATOM 8346 NH1 ARG 577 -12.155 115.350 -1.065 1.00 0.00 H ATOM 8347 NH2 ARG 577 -12.018 113.682 0.599 1.00 0.00 H ATOM 8348 C ARG 577 -8.217 111.421 -2.745 1.00 0.00 C ATOM 8349 O ARG 577 -8.103 110.514 -1.923 1.00 0.00 O ATOM 8350 N ILE 578 -7.264 111.707 -3.643 1.00 0.00 N ATOM 8351 CA ILE 578 -6.052 110.959 -3.763 1.00 0.00 C ATOM 8352 CB ILE 578 -5.065 111.589 -4.706 1.00 0.00 C ATOM 8353 CG2 ILE 578 -3.686 111.003 -4.392 1.00 0.00 C ATOM 8354 CG1 ILE 578 -5.494 111.443 -6.175 1.00 0.00 C ATOM 8355 CD1 ILE 578 -5.542 110.000 -6.672 1.00 0.00 C ATOM 8356 C ILE 578 -5.429 111.015 -2.418 1.00 0.00 C ATOM 8357 O ILE 578 -4.711 110.109 -2.001 1.00 0.00 O ATOM 8358 N SER 579 -5.643 112.142 -1.727 1.00 0.00 N ATOM 8359 CA SER 579 -5.111 112.266 -0.416 1.00 0.00 C ATOM 8360 CB SER 579 -5.479 113.605 0.241 1.00 0.00 C ATOM 8361 OG SER 579 -4.922 114.681 -0.502 1.00 0.00 O ATOM 8362 C SER 579 -5.670 111.173 0.451 1.00 0.00 C ATOM 8363 O SER 579 -4.916 110.501 1.151 1.00 0.00 O ATOM 8364 N ASN 580 -7.010 110.995 0.458 1.00 0.00 N ATOM 8365 CA ASN 580 -7.652 110.013 1.296 1.00 0.00 C ATOM 8366 CB ASN 580 -9.157 110.265 1.457 1.00 0.00 C ATOM 8367 CG ASN 580 -9.283 111.459 2.390 1.00 0.00 C ATOM 8368 OD1 ASN 580 -8.371 111.745 3.165 1.00 0.00 O ATOM 8369 ND2 ASN 580 -10.438 112.172 2.322 1.00 0.00 N ATOM 8370 C ASN 580 -7.469 108.579 0.873 1.00 0.00 C ATOM 8371 O ASN 580 -7.014 107.756 1.665 1.00 0.00 O ATOM 8372 N SER 581 -7.806 108.234 -0.384 1.00 0.00 N ATOM 8373 CA SER 581 -7.715 106.873 -0.841 1.00 0.00 C ATOM 8374 CB SER 581 -9.063 106.185 -1.101 1.00 0.00 C ATOM 8375 OG SER 581 -9.791 106.043 0.107 1.00 0.00 O ATOM 8376 C SER 581 -7.045 106.948 -2.156 1.00 0.00 C ATOM 8377 O SER 581 -6.668 108.043 -2.570 1.00 0.00 O ATOM 8378 N LYS 582 -6.831 105.793 -2.829 1.00 0.00 N ATOM 8379 CA LYS 582 -6.146 105.945 -4.073 1.00 0.00 C ATOM 8380 CB LYS 582 -5.960 104.616 -4.817 1.00 0.00 C ATOM 8381 CG LYS 582 -5.278 103.544 -3.972 1.00 0.00 C ATOM 8382 CD LYS 582 -3.923 103.967 -3.401 1.00 0.00 C ATOM 8383 CE LYS 582 -2.807 104.056 -4.443 1.00 0.00 C ATOM 8384 NZ LYS 582 -1.526 104.396 -3.783 1.00 0.00 N ATOM 8385 C LYS 582 -6.987 106.798 -4.963 1.00 0.00 C ATOM 8386 O LYS 582 -6.663 107.947 -5.238 1.00 0.00 O ATOM 8387 N LEU 583 -8.047 106.190 -5.505 1.00 0.00 N ATOM 8388 CA LEU 583 -9.094 106.751 -6.299 1.00 0.00 C ATOM 8389 CB LEU 583 -9.362 105.910 -7.559 1.00 0.00 C ATOM 8390 CG LEU 583 -10.220 106.646 -8.599 1.00 0.00 C ATOM 8391 CD1 LEU 583 -9.455 107.848 -9.178 1.00 0.00 C ATOM 8392 CD2 LEU 583 -10.767 105.683 -9.660 1.00 0.00 C ATOM 8393 C LEU 583 -10.390 106.904 -5.559 1.00 0.00 C ATOM 8394 O LEU 583 -11.368 107.256 -6.200 1.00 0.00 O ATOM 8395 N VAL 584 -10.525 106.487 -4.286 1.00 0.00 N ATOM 8396 CA VAL 584 -11.888 106.396 -3.816 1.00 0.00 C ATOM 8397 CB VAL 584 -12.229 104.957 -3.514 1.00 0.00 C ATOM 8398 CG1 VAL 584 -13.676 104.821 -3.014 1.00 0.00 C ATOM 8399 CG2 VAL 584 -11.915 104.125 -4.770 1.00 0.00 C ATOM 8400 C VAL 584 -12.148 107.228 -2.587 1.00 0.00 C ATOM 8401 O VAL 584 -11.223 107.664 -1.907 1.00 0.00 O ATOM 8402 N ASN 585 -13.447 107.532 -2.307 1.00 0.00 N ATOM 8403 CA ASN 585 -13.783 108.269 -1.120 1.00 0.00 C ATOM 8404 CB ASN 585 -13.470 109.768 -1.255 1.00 0.00 C ATOM 8405 CG ASN 585 -13.584 110.416 0.116 1.00 0.00 C ATOM 8406 OD1 ASN 585 -14.636 110.922 0.498 1.00 0.00 O ATOM 8407 ND2 ASN 585 -12.462 110.399 0.884 1.00 0.00 N ATOM 8408 C ASN 585 -15.248 108.122 -0.833 1.00 0.00 C ATOM 8409 O ASN 585 -16.073 108.250 -1.725 1.00 0.00 O ATOM 8410 N ASP 586 -15.662 107.864 0.419 1.00 0.00 N ATOM 8411 CA ASP 586 -17.085 107.739 0.596 1.00 0.00 C ATOM 8412 CB ASP 586 -17.484 107.018 1.892 1.00 0.00 C ATOM 8413 CG ASP 586 -17.088 105.557 1.748 1.00 0.00 C ATOM 8414 OD1 ASP 586 -17.007 105.078 0.584 1.00 0.00 O ATOM 8415 OD2 ASP 586 -16.863 104.898 2.797 1.00 0.00 O ATOM 8416 C ASP 586 -17.665 109.118 0.638 1.00 0.00 C ATOM 8417 O ASP 586 -16.964 110.054 1.009 1.00 0.00 O ATOM 8418 N LYS 587 -18.941 109.269 0.202 1.00 0.00 N ATOM 8419 CA LYS 587 -19.720 110.484 0.295 1.00 0.00 C ATOM 8420 CB LYS 587 -19.028 111.783 0.758 1.00 0.00 C ATOM 8421 CG LYS 587 -19.962 112.797 1.439 1.00 0.00 C ATOM 8422 CD LYS 587 -21.236 113.201 0.689 1.00 0.00 C ATOM 8423 CE LYS 587 -22.003 114.350 1.339 1.00 0.00 C ATOM 8424 NZ LYS 587 -23.103 114.791 0.454 1.00 0.00 N ATOM 8425 C LYS 587 -20.233 110.839 -1.038 1.00 0.00 C ATOM 8426 O LYS 587 -21.160 110.197 -1.538 1.00 0.00 O ATOM 8427 N GLN 588 -19.805 112.068 -1.426 1.00 0.00 N ATOM 8428 CA GLN 588 -19.862 112.731 -2.697 1.00 0.00 C ATOM 8429 CB GLN 588 -19.846 114.265 -2.598 1.00 0.00 C ATOM 8430 CG GLN 588 -21.112 114.872 -1.996 1.00 0.00 C ATOM 8431 CD GLN 588 -20.978 116.383 -2.104 1.00 0.00 C ATOM 8432 OE1 GLN 588 -20.186 117.007 -1.399 1.00 0.00 O ATOM 8433 NE2 GLN 588 -21.770 116.992 -3.026 1.00 0.00 N ATOM 8434 C GLN 588 -18.682 112.359 -3.544 1.00 0.00 C ATOM 8435 O GLN 588 -18.797 112.192 -4.756 1.00 0.00 O ATOM 8436 N LYS 589 -17.498 112.245 -2.914 1.00 0.00 N ATOM 8437 CA LYS 589 -16.259 112.055 -3.619 1.00 0.00 C ATOM 8438 CB LYS 589 -15.043 112.156 -2.690 1.00 0.00 C ATOM 8439 CG LYS 589 -14.907 113.571 -2.125 1.00 0.00 C ATOM 8440 CD LYS 589 -14.698 114.636 -3.204 1.00 0.00 C ATOM 8441 CE LYS 589 -15.019 116.061 -2.748 1.00 0.00 C ATOM 8442 NZ LYS 589 -14.846 116.185 -1.285 1.00 0.00 N ATOM 8443 C LYS 589 -16.219 110.750 -4.359 1.00 0.00 C ATOM 8444 O LYS 589 -15.654 110.679 -5.449 1.00 0.00 O ATOM 8445 N LYS 590 -16.783 109.671 -3.796 1.00 0.00 N ATOM 8446 CA LYS 590 -16.751 108.425 -4.512 1.00 0.00 C ATOM 8447 CB LYS 590 -17.490 107.265 -3.809 1.00 0.00 C ATOM 8448 CG LYS 590 -17.067 105.858 -4.243 1.00 0.00 C ATOM 8449 CD LYS 590 -17.275 105.549 -5.724 1.00 0.00 C ATOM 8450 CE LYS 590 -16.007 105.704 -6.563 1.00 0.00 C ATOM 8451 NZ LYS 590 -16.271 105.284 -7.958 1.00 0.00 N ATOM 8452 C LYS 590 -17.551 108.630 -5.761 1.00 0.00 C ATOM 8453 O LYS 590 -17.153 108.193 -6.837 1.00 0.00 O ATOM 8454 N HIS 591 -18.705 109.313 -5.612 1.00 0.00 N ATOM 8455 CA HIS 591 -19.717 109.533 -6.610 1.00 0.00 C ATOM 8456 ND1 HIS 591 -22.853 109.577 -7.562 1.00 0.00 N ATOM 8457 CG HIS 591 -22.013 110.531 -7.036 1.00 0.00 C ATOM 8458 CB HIS 591 -20.945 110.255 -6.018 1.00 0.00 C ATOM 8459 NE2 HIS 591 -23.410 111.506 -8.517 1.00 0.00 N ATOM 8460 CD2 HIS 591 -22.367 111.705 -7.630 1.00 0.00 C ATOM 8461 CE1 HIS 591 -23.669 110.215 -8.444 1.00 0.00 C ATOM 8462 C HIS 591 -19.250 110.350 -7.780 1.00 0.00 C ATOM 8463 O HIS 591 -19.487 109.971 -8.927 1.00 0.00 O ATOM 8464 N ILE 592 -18.581 111.492 -7.532 1.00 0.00 N ATOM 8465 CA ILE 592 -18.146 112.383 -8.567 1.00 0.00 C ATOM 8466 CB ILE 592 -17.517 113.642 -8.038 1.00 0.00 C ATOM 8467 CG2 ILE 592 -16.260 113.261 -7.236 1.00 0.00 C ATOM 8468 CG1 ILE 592 -17.262 114.632 -9.186 1.00 0.00 C ATOM 8469 CD1 ILE 592 -18.545 115.173 -9.816 1.00 0.00 C ATOM 8470 C ILE 592 -17.146 111.684 -9.427 1.00 0.00 C ATOM 8471 O ILE 592 -17.087 111.886 -10.639 1.00 0.00 O ATOM 8472 N LEU 593 -16.280 110.892 -8.779 1.00 0.00 N ATOM 8473 CA LEU 593 -15.256 110.100 -9.391 1.00 0.00 C ATOM 8474 CB LEU 593 -14.403 109.434 -8.300 1.00 0.00 C ATOM 8475 CG LEU 593 -13.460 110.402 -7.559 1.00 0.00 C ATOM 8476 CD1 LEU 593 -12.639 109.674 -6.485 1.00 0.00 C ATOM 8477 CD2 LEU 593 -12.564 111.172 -8.547 1.00 0.00 C ATOM 8478 C LEU 593 -15.876 109.025 -10.233 1.00 0.00 C ATOM 8479 O LEU 593 -15.525 108.833 -11.398 1.00 0.00 O ATOM 8480 N GLY 594 -16.854 108.304 -9.661 1.00 0.00 N ATOM 8481 CA GLY 594 -17.460 107.238 -10.391 1.00 0.00 C ATOM 8482 C GLY 594 -18.096 107.883 -11.559 1.00 0.00 C ATOM 8483 O GLY 594 -18.057 107.363 -12.666 1.00 0.00 O ATOM 8484 N GLU 595 -18.697 109.053 -11.313 1.00 0.00 N ATOM 8485 CA GLU 595 -19.384 109.823 -12.293 1.00 0.00 C ATOM 8486 CB GLU 595 -20.218 110.975 -11.720 1.00 0.00 C ATOM 8487 CG GLU 595 -21.071 111.640 -12.799 1.00 0.00 C ATOM 8488 CD GLU 595 -21.563 112.976 -12.269 1.00 0.00 C ATOM 8489 OE1 GLU 595 -21.351 113.252 -11.059 1.00 0.00 O ATOM 8490 OE2 GLU 595 -22.153 113.746 -13.070 1.00 0.00 O ATOM 8491 C GLU 595 -18.430 110.442 -13.265 1.00 0.00 C ATOM 8492 O GLU 595 -18.868 110.944 -14.280 1.00 0.00 O ATOM 8493 N LEU 596 -17.127 110.531 -12.976 1.00 0.00 N ATOM 8494 CA LEU 596 -16.221 111.276 -13.811 1.00 0.00 C ATOM 8495 CB LEU 596 -14.922 111.680 -13.099 1.00 0.00 C ATOM 8496 CG LEU 596 -14.166 112.774 -13.868 1.00 0.00 C ATOM 8497 CD1 LEU 596 -15.058 114.008 -14.096 1.00 0.00 C ATOM 8498 CD2 LEU 596 -12.866 113.155 -13.157 1.00 0.00 C ATOM 8499 C LEU 596 -15.913 110.736 -15.185 1.00 0.00 C ATOM 8500 O LEU 596 -15.368 111.506 -15.970 1.00 0.00 O ATOM 8501 N TYR 597 -16.046 109.444 -15.567 1.00 0.00 N ATOM 8502 CA TYR 597 -16.350 108.222 -14.917 1.00 0.00 C ATOM 8503 CB TYR 597 -17.115 107.232 -15.802 1.00 0.00 C ATOM 8504 CG TYR 597 -18.484 107.845 -15.744 1.00 0.00 C ATOM 8505 CD1 TYR 597 -18.758 109.022 -16.399 1.00 0.00 C ATOM 8506 CD2 TYR 597 -19.483 107.284 -14.984 1.00 0.00 C ATOM 8507 CE1 TYR 597 -20.009 109.594 -16.318 1.00 0.00 C ATOM 8508 CE2 TYR 597 -20.731 107.854 -14.892 1.00 0.00 C ATOM 8509 CZ TYR 597 -20.996 109.018 -15.567 1.00 0.00 C ATOM 8510 OH TYR 597 -22.267 109.621 -15.487 1.00 0.00 H ATOM 8511 C TYR 597 -15.120 107.756 -14.211 1.00 0.00 C ATOM 8512 O TYR 597 -15.047 106.635 -13.723 1.00 0.00 O ATOM 8513 N LEU 598 -14.050 108.557 -14.356 1.00 0.00 N ATOM 8514 CA LEU 598 -12.745 108.369 -13.792 1.00 0.00 C ATOM 8515 CB LEU 598 -12.654 107.969 -12.321 1.00 0.00 C ATOM 8516 CG LEU 598 -12.784 109.100 -11.306 1.00 0.00 C ATOM 8517 CD1 LEU 598 -12.180 108.606 -9.990 1.00 0.00 C ATOM 8518 CD2 LEU 598 -12.136 110.405 -11.789 1.00 0.00 C ATOM 8519 C LEU 598 -12.086 107.249 -14.485 1.00 0.00 C ATOM 8520 O LEU 598 -11.868 107.284 -15.692 1.00 0.00 O ATOM 8521 N PHE 599 -11.789 106.203 -13.704 1.00 0.00 N ATOM 8522 CA PHE 599 -11.158 105.014 -14.175 1.00 0.00 C ATOM 8523 CB PHE 599 -10.653 104.122 -13.032 1.00 0.00 C ATOM 8524 CG PHE 599 -9.377 104.752 -12.588 1.00 0.00 C ATOM 8525 CD1 PHE 599 -9.347 106.073 -12.211 1.00 0.00 C ATOM 8526 CD2 PHE 599 -8.219 104.015 -12.525 1.00 0.00 C ATOM 8527 CE1 PHE 599 -8.175 106.660 -11.796 1.00 0.00 C ATOM 8528 CE2 PHE 599 -7.042 104.597 -12.111 1.00 0.00 C ATOM 8529 CZ PHE 599 -7.017 105.922 -11.751 1.00 0.00 C ATOM 8530 C PHE 599 -12.129 104.273 -15.009 1.00 0.00 C ATOM 8531 O PHE 599 -11.717 103.580 -15.936 1.00 0.00 O ATOM 8532 N LEU 600 -13.421 104.347 -14.613 1.00 0.00 N ATOM 8533 CA LEU 600 -14.567 103.796 -15.286 1.00 0.00 C ATOM 8534 CB LEU 600 -14.289 102.746 -16.381 1.00 0.00 C ATOM 8535 CG LEU 600 -13.784 103.328 -17.710 1.00 0.00 C ATOM 8536 CD1 LEU 600 -13.531 102.216 -18.740 1.00 0.00 C ATOM 8537 CD2 LEU 600 -14.733 104.419 -18.233 1.00 0.00 C ATOM 8538 C LEU 600 -15.499 103.196 -14.282 1.00 0.00 C ATOM 8539 O LEU 600 -15.142 103.011 -13.120 1.00 0.00 O ATOM 8540 N ASN 601 -16.733 102.876 -14.739 1.00 0.00 N ATOM 8541 CA ASN 601 -17.768 102.277 -13.936 1.00 0.00 C ATOM 8542 CB ASN 601 -18.063 103.082 -12.656 1.00 0.00 C ATOM 8543 CG ASN 601 -18.364 104.531 -13.011 1.00 0.00 C ATOM 8544 OD1 ASN 601 -17.708 105.144 -13.853 1.00 0.00 O ATOM 8545 ND2 ASN 601 -19.411 105.094 -12.355 1.00 0.00 N ATOM 8546 C ASN 601 -18.984 102.189 -14.812 1.00 0.00 C ATOM 8547 O ASN 601 -18.935 101.402 -15.766 1.00 0.00 O ATOM 8548 N ASP 602 -20.117 102.906 -14.483 1.00 0.00 N ATOM 8549 CA ASP 602 -21.148 102.838 -15.470 1.00 0.00 C ATOM 8550 CB ASP 602 -21.893 101.494 -15.480 1.00 0.00 C ATOM 8551 CG ASP 602 -22.535 101.376 -16.854 1.00 0.00 C ATOM 8552 OD1 ASP 602 -22.167 102.196 -17.737 1.00 0.00 O ATOM 8553 OD2 ASP 602 -23.390 100.471 -17.047 1.00 0.00 O ATOM 8554 C ASP 602 -22.203 103.908 -15.533 1.00 0.00 C ATOM 8555 O ASP 602 -23.095 103.991 -14.684 1.00 0.00 O ATOM 8556 N ASN 603 -22.105 104.750 -16.590 1.00 0.00 N ATOM 8557 CA ASN 603 -23.186 105.588 -17.022 1.00 0.00 C ATOM 8558 CB ASN 603 -23.054 107.068 -16.636 1.00 0.00 C ATOM 8559 CG ASN 603 -24.444 107.679 -16.780 1.00 0.00 C ATOM 8560 OD1 ASN 603 -25.445 106.967 -16.802 1.00 0.00 O ATOM 8561 ND2 ASN 603 -24.510 109.033 -16.882 1.00 0.00 N ATOM 8562 C ASN 603 -23.128 105.502 -18.523 1.00 0.00 C ATOM 8563 O ASN 603 -23.149 106.519 -19.213 1.00 0.00 O ATOM 8564 N GLY 604 -23.099 104.260 -19.062 1.00 0.00 N ATOM 8565 CA GLY 604 -22.951 104.021 -20.476 1.00 0.00 C ATOM 8566 C GLY 604 -21.512 103.659 -20.720 1.00 0.00 C ATOM 8567 O GLY 604 -21.148 103.109 -21.759 1.00 0.00 O ATOM 8568 N TYR 605 -20.673 103.958 -19.714 1.00 0.00 N ATOM 8569 CA TYR 605 -19.273 103.657 -19.604 1.00 0.00 C ATOM 8570 CB TYR 605 -18.919 102.262 -20.167 1.00 0.00 C ATOM 8571 CG TYR 605 -19.805 101.203 -19.587 1.00 0.00 C ATOM 8572 CD1 TYR 605 -19.544 100.604 -18.375 1.00 0.00 C ATOM 8573 CD2 TYR 605 -20.918 100.806 -20.289 1.00 0.00 C ATOM 8574 CE1 TYR 605 -20.387 99.628 -17.885 1.00 0.00 C ATOM 8575 CE2 TYR 605 -21.762 99.837 -19.811 1.00 0.00 C ATOM 8576 CZ TYR 605 -21.495 99.245 -18.607 1.00 0.00 C ATOM 8577 OH TYR 605 -22.371 98.253 -18.128 1.00 0.00 H ATOM 8578 C TYR 605 -18.399 104.646 -20.347 1.00 0.00 C ATOM 8579 O TYR 605 -17.210 104.710 -20.034 1.00 0.00 O ATOM 8580 N LEU 606 -18.847 105.267 -21.469 1.00 0.00 N ATOM 8581 CA LEU 606 -18.159 106.395 -22.073 1.00 0.00 C ATOM 8582 CB LEU 606 -17.950 106.148 -23.582 1.00 0.00 C ATOM 8583 CG LEU 606 -17.307 107.260 -24.446 1.00 0.00 C ATOM 8584 CD1 LEU 606 -16.883 106.667 -25.796 1.00 0.00 C ATOM 8585 CD2 LEU 606 -18.222 108.472 -24.720 1.00 0.00 C ATOM 8586 C LEU 606 -18.833 107.716 -21.974 1.00 0.00 C ATOM 8587 O LEU 606 -18.342 108.598 -21.257 1.00 0.00 O ATOM 8588 N LYS 607 -20.035 107.752 -22.678 1.00 0.00 N ATOM 8589 CA LYS 607 -20.782 108.914 -23.113 1.00 0.00 C ATOM 8590 CB LYS 607 -22.221 108.583 -23.548 1.00 0.00 C ATOM 8591 CG LYS 607 -22.971 109.770 -24.158 1.00 0.00 C ATOM 8592 CD LYS 607 -23.146 110.947 -23.195 1.00 0.00 C ATOM 8593 CE LYS 607 -23.843 112.158 -23.821 1.00 0.00 C ATOM 8594 NZ LYS 607 -25.305 111.938 -23.877 1.00 0.00 N ATOM 8595 C LYS 607 -20.830 109.683 -21.882 1.00 0.00 C ATOM 8596 O LYS 607 -20.164 110.707 -21.745 1.00 0.00 O ATOM 8597 N SER 608 -21.563 109.143 -20.914 1.00 0.00 N ATOM 8598 CA SER 608 -21.342 109.686 -19.629 1.00 0.00 C ATOM 8599 CB SER 608 -19.862 109.635 -19.238 1.00 0.00 C ATOM 8600 OG SER 608 -19.480 108.293 -18.984 1.00 0.00 O ATOM 8601 C SER 608 -21.790 111.089 -19.502 1.00 0.00 C ATOM 8602 O SER 608 -22.469 111.657 -20.354 1.00 0.00 O ATOM 8603 N ILE 609 -21.371 111.650 -18.357 1.00 0.00 N ATOM 8604 CA ILE 609 -21.707 112.950 -17.890 1.00 0.00 C ATOM 8605 CB ILE 609 -21.996 112.959 -16.415 1.00 0.00 C ATOM 8606 CG2 ILE 609 -22.024 114.416 -15.932 1.00 0.00 C ATOM 8607 CG1 ILE 609 -23.269 112.153 -16.106 1.00 0.00 C ATOM 8608 CD1 ILE 609 -23.513 111.948 -14.613 1.00 0.00 C ATOM 8609 C ILE 609 -20.581 113.899 -18.124 1.00 0.00 C ATOM 8610 O ILE 609 -19.410 113.590 -17.898 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.47 69.1 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 49.15 84.3 70 100.0 70 ARMSMC SURFACE . . . . . . . . 59.86 68.9 90 100.0 90 ARMSMC BURIED . . . . . . . . 63.14 70.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.77 47.2 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 76.03 48.1 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 73.69 54.5 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 79.72 44.2 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 62.54 60.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.34 38.3 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 91.70 40.0 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 90.58 41.9 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 91.30 39.5 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 96.59 33.3 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.44 25.0 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 99.05 20.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 87.18 33.3 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 93.99 20.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 96.63 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.55 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 91.55 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 94.53 50.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 76.55 60.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 144.87 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.08 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.08 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1442 CRMSCA SECONDARY STRUCTURE . . 6.83 35 100.0 35 CRMSCA SURFACE . . . . . . . . 8.34 46 100.0 46 CRMSCA BURIED . . . . . . . . 6.73 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.19 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 6.85 174 100.0 174 CRMSMC SURFACE . . . . . . . . 8.46 228 100.0 228 CRMSMC BURIED . . . . . . . . 6.80 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.09 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 9.91 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 9.44 151 100.0 151 CRMSSC SURFACE . . . . . . . . 10.43 196 100.0 196 CRMSSC BURIED . . . . . . . . 8.14 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.14 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 8.21 291 100.0 291 CRMSALL SURFACE . . . . . . . . 9.45 380 100.0 380 CRMSALL BURIED . . . . . . . . 7.42 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.493 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 6.440 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 7.715 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 6.474 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.551 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 6.450 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 7.780 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 6.504 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.326 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 9.181 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 8.748 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 9.676 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 7.566 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.385 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 7.559 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 8.679 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 6.968 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 7 47 56 56 DISTCA CA (P) 0.00 1.79 3.57 12.50 83.93 56 DISTCA CA (RMS) 0.00 1.87 1.98 3.81 6.63 DISTCA ALL (N) 0 1 10 63 340 459 459 DISTALL ALL (P) 0.00 0.22 2.18 13.73 74.07 459 DISTALL ALL (RMS) 0.00 1.87 2.45 4.07 6.91 DISTALL END of the results output