####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 114 ( 456), selected 114 , name T0547TS328_1_2-D1 # Molecule2: number of CA atoms 183 ( 1490), selected 114 , name T0547-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS328_1_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 502 - 535 4.96 19.53 LCS_AVERAGE: 14.40 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 458 - 468 1.84 23.04 LCS_AVERAGE: 3.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 518 - 524 0.95 34.65 LCS_AVERAGE: 2.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 114 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Y 440 Y 440 4 5 18 4 4 5 5 7 9 10 12 13 14 16 17 20 23 26 27 29 35 36 40 LCS_GDT L 441 L 441 4 5 19 4 4 5 5 7 9 10 12 13 14 16 18 21 26 31 34 36 39 42 49 LCS_GDT V 442 V 442 4 5 26 4 4 4 5 8 10 10 12 15 20 24 27 30 30 31 36 40 45 47 51 LCS_GDT N 443 N 443 4 5 26 4 4 4 5 8 10 11 16 21 22 26 27 30 30 33 36 40 45 47 51 LCS_GDT F 444 F 444 3 5 26 1 3 4 5 6 9 11 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT S 445 S 445 4 6 26 4 4 5 5 8 10 11 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT L 446 L 446 4 6 26 4 4 4 5 7 9 10 12 15 20 24 27 30 30 31 36 40 45 47 51 LCS_GDT F 447 F 447 4 6 26 4 4 5 5 7 9 11 12 18 21 27 27 30 30 33 36 40 45 47 51 LCS_GDT Q 448 Q 448 4 6 26 4 4 6 7 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT S 449 S 449 4 6 26 3 4 4 6 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT M 450 M 450 5 7 26 4 4 6 7 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT P 451 P 451 5 7 26 4 4 5 6 8 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT D 452 D 452 5 7 26 4 4 5 6 8 9 12 16 21 23 27 27 30 30 32 36 40 45 47 51 LCS_GDT F 453 F 453 5 8 26 4 4 5 7 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT W 454 W 454 5 8 26 4 4 6 7 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT G 455 G 455 4 8 26 4 4 6 7 9 10 13 16 19 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT L 456 L 456 4 8 26 4 4 6 7 9 10 13 16 19 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT E 457 E 457 4 9 26 3 3 6 7 9 10 13 16 21 23 27 27 30 30 33 36 40 45 47 51 LCS_GDT Q 458 Q 458 6 11 26 4 5 6 8 9 11 13 15 21 23 27 27 29 30 33 36 40 45 47 51 LCS_GDT N 459 N 459 6 11 26 4 5 6 8 9 11 13 16 21 23 27 27 29 30 33 36 40 45 47 51 LCS_GDT F 460 F 460 6 11 26 4 5 6 8 10 11 13 15 17 23 27 27 29 29 33 36 40 45 47 51 LCS_GDT P 461 P 461 6 11 26 4 5 6 8 10 11 13 16 21 23 27 27 29 29 32 36 40 45 47 51 LCS_GDT I 462 I 462 6 11 26 3 5 6 8 10 11 13 16 21 23 27 27 29 33 35 39 44 47 51 52 LCS_GDT M 463 M 463 6 11 26 3 5 6 8 10 11 13 16 21 23 29 34 36 40 43 47 49 55 60 61 LCS_GDT P 464 P 464 5 11 26 3 4 6 8 10 11 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT L 465 L 465 5 11 26 3 4 6 8 10 11 13 16 21 24 31 35 38 40 43 47 52 55 60 61 LCS_GDT D 466 D 466 5 11 26 3 4 6 8 10 11 13 16 21 23 28 31 35 40 43 47 52 55 60 61 LCS_GDT R 467 R 467 5 11 26 4 4 6 8 10 11 13 15 17 22 25 29 35 38 43 47 52 55 60 61 LCS_GDT L 468 L 468 5 11 26 4 4 6 8 10 12 15 17 22 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT D 469 D 469 5 5 22 4 4 5 5 7 10 14 17 19 24 31 35 38 40 43 47 52 55 60 61 LCS_GDT E 470 E 470 5 5 22 4 4 5 6 8 10 13 17 18 23 28 31 37 40 43 47 52 55 60 61 LCS_GDT E 471 E 471 5 5 22 3 4 5 5 7 10 11 16 22 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT P 472 P 472 4 4 22 3 3 4 4 7 9 11 14 18 24 31 35 38 40 43 47 52 55 60 61 LCS_GDT T 473 T 473 4 4 22 3 3 4 4 7 9 11 18 23 25 29 34 38 40 43 47 52 55 60 61 LCS_GDT R 474 R 474 3 4 22 3 3 5 5 5 7 8 11 21 25 29 34 36 40 43 45 52 55 60 61 LCS_GDT S 475 S 475 3 4 19 3 3 3 4 6 7 11 13 15 25 29 34 36 40 43 47 52 55 60 61 LCS_GDT A 476 A 476 3 3 19 3 3 4 5 8 10 10 12 14 17 18 23 26 30 32 40 45 51 53 61 LCS_GDT S 477 S 477 3 3 19 3 3 3 4 4 10 10 12 14 17 18 23 26 28 31 36 40 45 47 51 LCS_GDT I 478 I 478 3 3 21 3 3 4 5 6 10 11 12 15 19 24 27 30 30 33 36 40 45 47 51 LCS_GDT W 479 W 479 3 4 21 0 3 3 4 8 9 11 14 18 20 24 27 30 30 33 36 40 45 47 51 LCS_GDT D 480 D 480 3 4 21 3 3 3 4 5 6 7 11 14 16 23 27 30 30 33 36 40 45 47 51 LCS_GDT I 481 I 481 3 4 21 3 3 3 4 8 9 11 14 18 20 27 27 30 30 33 36 40 45 47 51 LCS_GDT T 482 T 482 4 4 21 3 3 4 4 6 8 10 12 18 20 24 27 30 30 31 36 37 40 47 51 LCS_GDT C 483 C 483 4 4 21 3 3 4 4 5 8 9 12 18 20 24 27 30 30 31 32 34 36 41 41 LCS_GDT D 484 D 484 4 4 21 3 3 4 4 8 9 11 14 18 20 24 27 30 30 31 36 40 45 47 51 LCS_GDT S 485 S 485 4 5 21 3 3 5 5 7 9 11 12 15 20 24 27 30 30 33 36 40 45 47 51 LCS_GDT D 486 D 486 3 6 21 3 3 5 5 8 9 11 14 18 20 24 27 30 30 33 36 40 45 47 51 LCS_GDT G 487 G 487 4 8 21 3 4 5 6 8 9 11 14 18 20 24 27 30 30 33 36 40 45 47 51 LCS_GDT E 488 E 488 4 8 21 3 4 5 6 8 9 11 12 15 18 21 26 30 30 33 36 40 45 47 51 LCS_GDT I 489 I 489 4 8 21 3 4 5 6 8 9 11 12 15 16 22 27 30 30 33 36 40 45 47 51 LCS_GDT S 490 S 490 4 8 21 3 4 5 6 8 9 11 14 18 20 24 27 30 30 31 36 39 45 47 51 LCS_GDT Y 491 Y 491 4 8 21 3 4 5 6 8 9 11 12 15 19 23 27 30 30 31 36 40 47 49 52 LCS_GDT S 492 S 492 4 8 21 3 3 5 6 8 9 11 12 15 16 23 26 26 30 31 36 37 44 47 51 LCS_GDT K 493 K 493 4 8 21 3 4 5 6 8 9 11 12 15 16 21 23 26 27 31 36 39 45 47 51 LCS_GDT D 494 D 494 4 8 21 3 4 4 6 8 8 10 10 11 12 18 22 25 27 28 34 36 40 46 49 LCS_GDT K 495 K 495 4 6 21 3 3 4 4 7 9 10 12 15 19 21 25 34 38 41 47 52 55 60 61 LCS_GDT P 496 P 496 4 6 25 3 3 5 5 7 9 11 12 14 19 20 24 28 34 39 42 50 55 60 61 LCS_GDT L 497 L 497 3 5 31 3 3 5 6 8 10 12 14 17 19 21 25 32 39 42 47 52 55 60 61 LCS_GDT F 498 F 498 3 3 31 1 3 4 6 8 10 12 15 19 22 26 35 38 40 43 47 52 55 60 61 LCS_GDT L 499 L 499 3 3 32 1 3 4 6 8 10 15 18 21 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT H 500 H 500 3 3 32 3 3 4 5 9 10 12 16 20 23 27 32 38 40 43 47 52 55 60 61 LCS_GDT D 501 D 501 4 5 32 3 3 4 6 9 12 15 18 22 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT V 502 V 502 4 5 34 3 4 4 5 7 12 15 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT D 503 D 503 4 5 34 3 4 4 5 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT V 504 V 504 4 5 34 3 4 4 5 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT E 505 E 505 4 5 34 3 4 4 5 6 10 14 17 22 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT K 506 K 506 3 5 34 3 3 4 4 5 7 8 9 10 11 13 17 27 33 40 43 49 52 57 59 LCS_GDT E 507 E 507 3 5 34 3 3 4 5 6 7 8 9 14 19 24 27 33 39 43 47 52 55 60 61 LCS_GDT N 508 N 508 4 5 34 3 4 4 6 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT Y 509 Y 509 4 5 34 3 4 4 6 7 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT F 510 F 510 4 5 34 3 4 4 6 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT L 511 L 511 4 5 34 3 4 4 6 8 11 15 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT G 512 G 512 3 5 34 3 3 4 6 8 11 15 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT F 513 F 513 3 5 34 3 3 3 4 7 9 12 15 17 20 26 32 36 39 43 47 52 55 60 61 LCS_GDT F 514 F 514 3 6 34 3 3 3 6 7 9 11 15 17 20 26 30 35 39 41 45 48 52 57 61 LCS_GDT L 515 L 515 3 6 34 3 3 5 6 7 9 12 15 17 22 28 34 36 40 43 47 49 52 57 61 LCS_GDT V 516 V 516 4 6 34 4 4 4 6 7 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT G 517 G 517 4 8 34 4 4 4 8 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT A 518 A 518 7 8 34 4 4 7 8 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT Y 519 Y 519 7 8 34 4 5 7 8 8 12 16 18 23 26 31 34 38 40 43 47 51 55 60 61 LCS_GDT Q 520 Q 520 7 8 34 4 5 7 8 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT E 521 E 521 7 8 34 4 5 7 8 8 10 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT V 522 V 522 7 8 34 4 5 7 8 8 8 11 17 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT L 523 L 523 7 8 34 4 5 7 8 8 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT G 524 G 524 7 8 34 3 5 7 8 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT M 525 M 525 3 8 34 3 3 3 4 4 7 11 18 23 26 29 34 38 40 43 47 52 55 60 61 LCS_GDT K 526 K 526 4 7 34 3 4 4 4 5 7 10 17 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT H 527 H 527 4 7 34 3 4 4 6 6 7 9 18 22 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT N 528 N 528 4 7 34 3 4 4 6 6 7 8 13 17 22 28 34 38 40 43 47 50 54 58 60 LCS_GDT L 529 L 529 4 7 34 3 4 4 6 6 7 10 14 18 25 29 34 38 40 43 47 51 55 60 61 LCS_GDT F 530 F 530 3 7 34 0 3 4 6 6 7 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT T 531 T 531 4 7 34 3 3 5 6 6 9 10 13 17 21 26 32 38 40 43 47 52 55 60 61 LCS_GDT H 532 H 532 4 7 34 3 3 5 8 10 10 11 13 17 24 29 34 38 40 43 47 52 55 60 61 LCS_GDT P 533 P 533 4 7 34 3 3 5 8 9 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT T 534 T 534 4 7 34 3 4 5 8 8 10 10 12 17 21 29 35 38 40 43 47 52 55 60 61 LCS_GDT E 535 E 535 4 7 34 3 4 5 8 8 11 13 18 23 26 31 35 38 40 43 47 52 55 60 61 LCS_GDT A 536 A 536 4 7 30 4 4 5 8 8 10 12 15 18 24 29 35 38 40 43 47 52 55 60 61 LCS_GDT I 537 I 537 4 9 30 4 4 5 8 8 10 11 15 18 24 29 35 38 40 43 47 52 55 60 61 LCS_GDT I 538 I 538 4 9 24 4 4 5 8 8 10 11 14 15 23 28 35 38 40 43 47 52 55 60 61 LCS_GDT S 539 S 539 4 9 24 4 4 4 8 8 10 10 12 15 17 21 31 35 38 43 47 52 55 60 61 LCS_GDT I 540 I 540 5 9 18 4 5 5 7 7 8 10 12 15 16 16 17 21 23 27 38 43 47 57 59 LCS_GDT N 541 N 541 5 9 18 4 5 5 7 7 8 10 12 15 16 16 17 18 20 21 26 29 32 36 51 LCS_GDT E 542 E 542 5 9 18 4 5 5 7 7 8 10 12 15 16 16 17 18 20 23 29 31 46 48 51 LCS_GDT K 543 K 543 6 9 18 4 5 6 7 7 10 10 12 15 16 16 20 23 29 34 39 42 44 49 53 LCS_GDT G 544 G 544 6 9 18 4 5 6 7 7 10 11 14 15 20 23 25 30 34 38 42 44 49 54 59 LCS_GDT Y 545 Y 545 6 9 18 4 5 6 8 8 10 11 14 15 20 23 26 30 34 38 43 47 54 58 61 LCS_GDT E 546 E 546 6 7 18 4 5 6 6 8 10 12 14 17 20 23 28 33 38 42 47 52 55 60 61 LCS_GDT V 547 V 547 6 7 18 3 5 6 6 7 7 9 12 15 19 22 27 33 38 42 47 52 55 60 61 LCS_GDT E 548 E 548 6 7 18 3 3 6 6 7 7 12 14 17 19 22 27 33 38 42 47 52 55 60 61 LCS_GDT G 549 G 549 4 6 18 3 4 5 6 8 10 12 14 17 21 24 28 33 38 42 47 52 55 60 61 LCS_GDT I 550 I 550 4 6 18 3 4 5 6 8 10 12 14 17 19 24 28 33 38 42 47 52 55 60 61 LCS_GDT I 551 I 551 4 6 18 3 4 5 6 7 7 10 13 15 16 21 26 33 38 42 46 52 55 60 61 LCS_GDT E 552 E 552 4 6 18 3 4 5 6 7 7 10 12 15 16 16 17 19 27 34 41 44 48 57 61 LCS_GDT A 553 A 553 3 5 18 3 3 3 3 5 6 10 12 15 16 16 16 16 17 19 19 24 26 30 37 LCS_AVERAGE LCS_A: 6.81 ( 2.37 3.67 14.40 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 8 10 12 16 18 23 26 31 35 38 40 43 47 52 55 60 61 GDT PERCENT_AT 2.19 2.73 3.83 4.37 5.46 6.56 8.74 9.84 12.57 14.21 16.94 19.13 20.77 21.86 23.50 25.68 28.42 30.05 32.79 33.33 GDT RMS_LOCAL 0.11 0.38 0.95 1.44 1.79 2.31 2.78 2.89 3.35 3.60 3.99 4.48 4.64 4.78 5.04 5.40 6.19 6.27 6.73 6.84 GDT RMS_ALL_AT 33.24 33.72 34.65 31.59 23.40 20.20 19.51 19.62 19.40 19.94 19.98 20.12 20.11 19.27 19.37 19.61 20.11 19.87 19.67 19.73 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Y 440 Y 440 26.033 8 0.092 0.092 28.330 0.000 0.000 LGA L 441 L 441 30.564 4 0.052 0.052 30.564 0.000 0.000 LGA V 442 V 442 28.287 3 0.146 0.146 30.815 0.000 0.000 LGA N 443 N 443 32.342 4 0.285 0.285 32.363 0.000 0.000 LGA F 444 F 444 34.058 7 0.678 0.678 35.122 0.000 0.000 LGA S 445 S 445 37.972 2 0.644 0.644 37.972 0.000 0.000 LGA L 446 L 446 34.119 4 0.264 0.264 35.426 0.000 0.000 LGA F 447 F 447 36.797 7 0.072 0.072 38.399 0.000 0.000 LGA Q 448 Q 448 39.486 5 0.227 0.227 39.486 0.000 0.000 LGA S 449 S 449 33.438 2 0.137 0.137 35.321 0.000 0.000 LGA M 450 M 450 31.880 4 0.511 0.511 34.117 0.000 0.000 LGA P 451 P 451 38.923 3 0.089 0.089 39.933 0.000 0.000 LGA D 452 D 452 38.920 4 0.076 0.076 38.920 0.000 0.000 LGA F 453 F 453 35.160 7 0.164 0.164 37.411 0.000 0.000 LGA W 454 W 454 41.447 10 0.037 0.037 43.797 0.000 0.000 LGA G 455 G 455 43.206 0 0.034 0.034 44.348 0.000 0.000 LGA L 456 L 456 39.862 4 0.648 0.648 40.400 0.000 0.000 LGA E 457 E 457 39.266 5 0.175 0.175 39.875 0.000 0.000 LGA Q 458 Q 458 34.311 5 0.597 0.597 36.360 0.000 0.000 LGA N 459 N 459 27.846 4 0.112 0.112 30.379 0.000 0.000 LGA F 460 F 460 23.047 7 0.042 0.042 24.619 0.000 0.000 LGA P 461 P 461 17.954 3 0.023 0.023 20.195 0.000 0.000 LGA I 462 I 462 12.243 4 0.132 0.132 14.187 0.357 0.179 LGA M 463 M 463 7.726 4 0.102 0.102 9.440 14.048 7.024 LGA P 464 P 464 3.596 3 0.287 0.287 5.844 32.024 18.299 LGA L 465 L 465 8.529 4 0.152 0.152 11.478 5.119 2.560 LGA D 466 D 466 11.109 4 0.598 0.598 11.109 0.357 0.179 LGA R 467 R 467 10.012 7 0.458 0.458 10.251 2.976 1.082 LGA L 468 L 468 5.894 4 0.080 0.080 6.924 15.357 7.679 LGA D 469 D 469 10.510 4 0.126 0.126 12.088 0.714 0.357 LGA E 470 E 470 10.201 5 0.078 0.078 10.201 2.024 0.899 LGA E 471 E 471 8.695 5 0.121 0.121 9.384 7.143 3.175 LGA P 472 P 472 8.370 3 0.627 0.627 8.748 10.476 5.986 LGA T 473 T 473 4.993 3 0.460 0.460 6.087 27.857 15.918 LGA R 474 R 474 6.382 7 0.586 0.586 7.528 15.952 5.801 LGA S 475 S 475 6.860 2 0.593 0.593 9.145 10.238 6.825 LGA A 476 A 476 11.586 1 0.563 0.563 15.360 0.119 0.095 LGA S 477 S 477 17.612 2 0.619 0.619 19.053 0.000 0.000 LGA I 478 I 478 17.819 4 0.574 0.574 19.922 0.000 0.000 LGA W 479 W 479 18.272 10 0.607 0.607 19.088 0.000 0.000 LGA D 480 D 480 22.053 4 0.579 0.579 24.080 0.000 0.000 LGA I 481 I 481 26.564 4 0.548 0.548 28.539 0.000 0.000 LGA T 482 T 482 28.373 3 0.615 0.615 28.373 0.000 0.000 LGA C 483 C 483 28.400 2 0.034 0.034 29.756 0.000 0.000 LGA D 484 D 484 33.002 4 0.596 0.596 33.002 0.000 0.000 LGA S 485 S 485 33.388 2 0.059 0.059 33.388 0.000 0.000 LGA D 486 D 486 32.585 4 0.036 0.036 32.740 0.000 0.000 LGA G 487 G 487 27.336 0 0.387 0.387 29.297 0.000 0.000 LGA E 488 E 488 21.615 5 0.147 0.147 24.073 0.000 0.000 LGA I 489 I 489 16.999 4 0.269 0.269 18.157 0.000 0.000 LGA S 490 S 490 16.270 2 0.185 0.185 16.708 0.000 0.000 LGA Y 491 Y 491 12.375 8 0.014 0.014 14.990 0.000 0.000 LGA S 492 S 492 12.666 2 0.686 0.686 12.666 0.000 0.000 LGA K 493 K 493 13.834 5 0.600 0.600 15.477 0.000 0.000 LGA D 494 D 494 16.263 4 0.184 0.184 16.408 0.000 0.000 LGA K 495 K 495 11.751 5 0.348 0.348 12.645 0.000 0.000 LGA P 496 P 496 11.972 3 0.567 0.567 12.873 0.000 0.000 LGA L 497 L 497 11.958 4 0.658 0.658 11.958 0.000 0.000 LGA F 498 F 498 9.936 7 0.635 0.635 10.642 0.476 0.173 LGA L 499 L 499 6.796 4 0.666 0.666 7.901 9.405 4.702 LGA H 500 H 500 9.628 6 0.573 0.573 9.628 2.738 1.095 LGA D 501 D 501 7.195 4 0.464 0.464 8.187 11.310 5.655 LGA V 502 V 502 3.948 3 0.635 0.635 4.465 46.905 26.803 LGA D 503 D 503 2.345 4 0.487 0.487 3.214 67.262 33.631 LGA V 504 V 504 2.072 3 0.615 0.615 2.480 73.214 41.837 LGA E 505 E 505 4.149 5 0.681 0.681 7.243 28.571 12.698 LGA K 506 K 506 9.858 5 0.047 0.047 10.820 2.024 0.899 LGA E 507 E 507 7.875 5 0.651 0.651 8.192 11.667 5.185 LGA N 508 N 508 2.244 4 0.550 0.550 3.962 59.405 29.702 LGA Y 509 Y 509 2.784 8 0.133 0.133 3.583 53.690 17.897 LGA F 510 F 510 2.533 7 0.601 0.601 5.176 49.524 18.009 LGA L 511 L 511 3.098 4 0.602 0.602 3.098 55.476 27.738 LGA G 512 G 512 4.713 0 0.607 0.607 7.146 30.000 30.000 LGA F 513 F 513 7.888 7 0.637 0.637 8.239 9.524 3.463 LGA F 514 F 514 8.724 7 0.214 0.214 8.724 4.286 1.558 LGA L 515 L 515 7.586 4 0.397 0.397 7.891 10.357 5.179 LGA V 516 V 516 2.837 3 0.681 0.681 4.233 50.595 28.912 LGA G 517 G 517 1.293 0 0.062 0.062 2.402 77.262 77.262 LGA A 518 A 518 1.615 1 0.079 0.079 3.644 65.595 52.476 LGA Y 519 Y 519 3.022 8 0.195 0.195 3.161 59.405 19.802 LGA Q 520 Q 520 2.314 5 0.026 0.026 2.314 72.976 32.434 LGA E 521 E 521 4.131 5 0.049 0.049 5.020 39.405 17.513 LGA V 522 V 522 5.172 3 0.086 0.086 6.335 29.524 16.871 LGA L 523 L 523 3.283 4 0.368 0.368 3.283 57.500 28.750 LGA G 524 G 524 3.019 0 0.549 0.549 4.183 54.643 54.643 LGA M 525 M 525 5.088 4 0.099 0.099 5.793 30.952 15.476 LGA K 526 K 526 4.755 5 0.450 0.450 5.297 31.548 14.021 LGA H 527 H 527 5.216 6 0.279 0.279 5.216 33.095 13.238 LGA N 528 N 528 6.323 4 0.446 0.446 6.323 20.357 10.179 LGA L 529 L 529 6.484 4 0.336 0.336 6.593 17.262 8.631 LGA F 530 F 530 3.848 7 0.308 0.308 4.503 37.262 13.550 LGA T 531 T 531 7.496 3 0.684 0.684 7.496 14.405 8.231 LGA H 532 H 532 6.709 6 0.504 0.504 7.022 24.405 9.762 LGA P 533 P 533 2.191 3 0.620 0.620 3.099 61.071 34.898 LGA T 534 T 534 6.125 3 0.595 0.595 6.364 23.214 13.265 LGA E 535 E 535 4.433 5 0.017 0.017 6.427 27.976 12.434 LGA A 536 A 536 6.716 1 0.383 0.383 6.716 22.262 17.810 LGA I 537 I 537 7.886 4 0.065 0.065 10.929 3.690 1.845 LGA I 538 I 538 8.497 4 0.092 0.092 9.061 6.548 3.274 LGA S 539 S 539 12.503 2 0.637 0.637 13.908 0.000 0.000 LGA I 540 I 540 15.845 4 0.104 0.104 18.337 0.000 0.000 LGA N 541 N 541 21.723 4 0.123 0.123 21.723 0.000 0.000 LGA E 542 E 542 23.884 5 0.171 0.171 24.265 0.000 0.000 LGA K 543 K 543 26.322 5 0.100 0.100 26.322 0.000 0.000 LGA G 544 G 544 20.859 0 0.252 0.252 22.703 0.000 0.000 LGA Y 545 Y 545 18.555 8 0.089 0.089 19.320 0.000 0.000 LGA E 546 E 546 19.276 5 0.242 0.242 19.276 0.000 0.000 LGA V 547 V 547 17.044 3 0.652 0.652 18.168 0.000 0.000 LGA E 548 E 548 18.337 5 0.580 0.580 18.337 0.000 0.000 LGA G 549 G 549 16.589 0 0.430 0.430 17.663 0.000 0.000 LGA I 550 I 550 14.446 4 0.044 0.044 16.136 0.000 0.000 LGA I 551 I 551 14.276 4 0.284 0.284 14.485 0.000 0.000 LGA E 552 E 552 16.790 5 0.092 0.092 18.159 0.000 0.000 LGA A 553 A 553 20.494 1 0.650 0.650 23.337 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 114 456 456 100.00 929 456 49.09 183 SUMMARY(RMSD_GDC): 16.646 16.531 16.531 8.369 4.631 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 114 183 4.0 18 2.89 10.656 9.033 0.602 LGA_LOCAL RMSD: 2.891 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.616 Number of assigned atoms: 114 Std_ASGN_ATOMS RMSD: 16.646 Standard rmsd on all 114 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.155075 * X + -0.429808 * Y + 0.889503 * Z + -33.584511 Y_new = 0.712707 * X + -0.574834 * Y + -0.402013 * Z + 89.199646 Z_new = 0.684105 * X + 0.696298 * Y + 0.217185 * Z + -11.513158 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.356549 -0.753376 1.268445 [DEG: 77.7246 -43.1653 72.6766 ] ZXZ: 1.146320 1.351867 0.776566 [DEG: 65.6793 77.4563 44.4939 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS328_1_2-D1 REMARK 2: T0547-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS328_1_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 114 183 4.0 18 2.89 9.033 16.65 REMARK ---------------------------------------------------------- MOLECULE T0547TS328_1_2-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 2 REMARK PFRMAT TS REMARK TARGET T0547 REMARK PARENT 2on3_A ATOM 1697 N TYR 440 -27.345 55.258 -22.338 1.00 3.00 N ATOM 1698 CA TYR 440 -25.985 55.385 -22.841 1.00 3.00 C ATOM 1699 C TYR 440 -24.948 54.729 -21.913 1.00 3.00 C ATOM 1700 O TYR 440 -25.104 54.689 -20.671 1.00 3.00 O ATOM 1701 N LEU 441 -23.893 54.213 -22.536 1.00 3.00 N ATOM 1702 CA LEU 441 -22.672 53.926 -21.821 1.00 3.00 C ATOM 1703 C LEU 441 -21.560 54.855 -22.333 1.00 3.00 C ATOM 1704 O LEU 441 -21.095 54.768 -23.478 1.00 3.00 O ATOM 1705 N VAL 442 -21.155 55.754 -21.458 1.00 3.00 N ATOM 1706 CA VAL 442 -20.206 56.755 -21.800 1.00 3.00 C ATOM 1707 C VAL 442 -18.882 56.380 -21.175 1.00 3.00 C ATOM 1708 O VAL 442 -18.726 56.448 -19.955 1.00 3.00 O ATOM 1709 N ASN 443 -17.940 55.964 -22.016 1.00 3.00 N ATOM 1710 CA ASN 443 -16.603 55.574 -21.554 1.00 3.00 C ATOM 1711 C ASN 443 -15.204 56.278 -21.507 1.00 3.00 C ATOM 1712 O ASN 443 -14.945 57.305 -22.193 1.00 3.00 O ATOM 1713 N PHE 444 -14.345 55.754 -20.660 1.00 3.00 N ATOM 1714 CA PHE 444 -12.985 56.257 -20.480 1.00 3.00 C ATOM 1715 C PHE 444 -12.097 56.162 -21.731 1.00 3.00 C ATOM 1716 O PHE 444 -11.127 56.930 -21.855 1.00 3.00 O ATOM 1717 N SER 445 -12.435 55.296 -22.686 1.00 3.00 N ATOM 1718 CA SER 445 -11.642 55.123 -23.893 1.00 3.00 C ATOM 1719 C SER 445 -11.557 56.383 -24.774 1.00 3.00 C ATOM 1720 O SER 445 -10.567 56.582 -25.477 1.00 3.00 O ATOM 1721 N LEU 446 -12.609 57.204 -24.738 1.00 3.00 N ATOM 1722 CA LEU 446 -12.671 58.414 -25.579 1.00 3.00 C ATOM 1723 C LEU 446 -11.481 59.366 -25.335 1.00 3.00 C ATOM 1724 O LEU 446 -10.891 59.874 -26.286 1.00 3.00 O ATOM 1725 N PHE 447 -11.152 59.616 -24.071 1.00 3.00 N ATOM 1726 CA PHE 447 -10.022 60.488 -23.765 1.00 3.00 C ATOM 1727 C PHE 447 -8.675 59.993 -24.310 1.00 3.00 C ATOM 1728 O PHE 447 -7.734 60.767 -24.427 1.00 3.00 O ATOM 1729 N GLN 448 -8.562 58.690 -24.591 1.00 3.00 N ATOM 1730 CA GLN 448 -7.344 58.112 -25.142 1.00 3.00 C ATOM 1731 C GLN 448 -7.204 59.187 -26.251 1.00 3.00 C ATOM 1732 O GLN 448 -6.108 59.368 -26.827 1.00 3.00 O ATOM 1733 N SER 449 -8.333 59.874 -26.522 1.00 3.00 N ATOM 1734 CA SER 449 -8.462 60.873 -27.609 1.00 3.00 C ATOM 1735 C SER 449 -7.607 62.114 -27.365 1.00 3.00 C ATOM 1736 O SER 449 -6.951 62.625 -28.284 1.00 3.00 O ATOM 1737 N MET 450 -7.617 62.588 -26.115 1.00 3.00 N ATOM 1738 CA MET 450 -6.805 63.727 -25.744 1.00 3.00 C ATOM 1739 C MET 450 -5.338 63.433 -25.916 1.00 3.00 C ATOM 1740 O MET 450 -4.599 64.210 -26.487 1.00 3.00 O ATOM 1741 N PRO 451 -4.934 62.302 -25.368 1.00 3.00 N ATOM 1742 CA PRO 451 -3.575 61.791 -25.462 1.00 3.00 C ATOM 1743 C PRO 451 -3.173 61.734 -26.939 1.00 3.00 C ATOM 1744 O PRO 451 -2.168 62.322 -27.337 1.00 3.00 O ATOM 1745 N ASP 452 -3.996 61.049 -27.741 1.00 3.00 N ATOM 1746 CA ASP 452 -3.763 60.906 -29.165 1.00 3.00 C ATOM 1747 C ASP 452 -3.280 62.288 -29.574 1.00 3.00 C ATOM 1748 O ASP 452 -2.803 62.505 -30.697 1.00 3.00 O ATOM 1749 N PHE 453 -3.393 63.230 -28.647 1.00 3.00 N ATOM 1750 CA PHE 453 -2.981 64.594 -28.903 1.00 3.00 C ATOM 1751 C PHE 453 -1.538 64.726 -29.414 1.00 3.00 C ATOM 1752 O PHE 453 -1.167 65.758 -29.949 1.00 3.00 O ATOM 1753 N TRP 454 -0.738 63.671 -29.247 1.00 3.00 N ATOM 1754 CA TRP 454 0.653 63.720 -29.690 1.00 3.00 C ATOM 1755 C TRP 454 0.790 63.992 -31.187 1.00 3.00 C ATOM 1756 O TRP 454 1.736 64.653 -31.623 1.00 3.00 O ATOM 1757 N GLY 455 -0.151 63.498 -31.974 1.00 3.00 N ATOM 1758 CA GLY 455 -0.107 63.660 -33.414 1.00 3.00 C ATOM 1759 C GLY 455 0.255 65.069 -33.892 1.00 3.00 C ATOM 1760 O GLY 455 1.155 65.240 -34.716 1.00 3.00 O ATOM 1761 N LEU 456 -0.443 66.074 -33.372 1.00 3.00 N ATOM 1762 CA LEU 456 -0.185 67.447 -33.799 1.00 3.00 C ATOM 1763 C LEU 456 0.401 68.395 -32.755 1.00 3.00 C ATOM 1764 O LEU 456 0.242 69.611 -32.866 1.00 3.00 O ATOM 1765 N GLU 457 1.047 67.844 -31.736 1.00 3.00 N ATOM 1766 CA GLU 457 1.681 68.687 -30.724 1.00 3.00 C ATOM 1767 C GLU 457 1.839 70.188 -30.470 1.00 3.00 C ATOM 1768 O GLU 457 1.994 70.597 -29.328 1.00 3.00 O ATOM 1769 N GLN 458 1.744 70.971 -31.543 1.00 3.00 N ATOM 1770 CA GLN 458 1.724 72.439 -31.500 1.00 3.00 C ATOM 1771 C GLN 458 0.367 73.032 -31.069 1.00 3.00 C ATOM 1772 O GLN 458 0.306 74.178 -30.632 1.00 3.00 O ATOM 1773 N ASN 459 -0.711 72.257 -31.210 1.00 3.00 N ATOM 1774 CA ASN 459 -2.081 72.781 -31.239 1.00 3.00 C ATOM 1775 C ASN 459 -2.824 72.451 -29.951 1.00 3.00 C ATOM 1776 O ASN 459 -3.152 71.295 -29.707 1.00 3.00 O ATOM 1777 N PHE 460 -3.089 73.473 -29.135 1.00 3.00 N ATOM 1778 CA PHE 460 -3.890 73.328 -27.911 1.00 3.00 C ATOM 1779 C PHE 460 -5.356 73.094 -28.262 1.00 3.00 C ATOM 1780 O PHE 460 -5.940 73.863 -29.027 1.00 3.00 O ATOM 1781 N PRO 461 -5.977 72.045 -27.695 1.00 3.00 N ATOM 1782 CA PRO 461 -7.359 71.777 -28.084 1.00 3.00 C ATOM 1783 C PRO 461 -8.333 72.507 -27.148 1.00 3.00 C ATOM 1784 O PRO 461 -8.136 72.504 -25.940 1.00 3.00 O ATOM 1785 N ILE 462 -9.332 73.171 -27.708 1.00 3.00 N ATOM 1786 CA ILE 462 -10.337 73.888 -26.915 1.00 3.00 C ATOM 1787 C ILE 462 -11.687 73.246 -27.231 1.00 3.00 C ATOM 1788 O ILE 462 -12.314 73.584 -28.236 1.00 3.00 O ATOM 1789 N MET 463 -12.120 72.317 -26.378 1.00 3.00 N ATOM 1790 CA MET 463 -13.298 71.475 -26.621 1.00 3.00 C ATOM 1791 C MET 463 -14.567 72.259 -26.896 1.00 3.00 C ATOM 1792 O MET 463 -14.934 73.106 -26.108 1.00 3.00 O ATOM 1793 N PRO 464 -15.243 71.973 -28.002 1.00 3.00 N ATOM 1794 CA PRO 464 -16.477 72.673 -28.339 1.00 3.00 C ATOM 1795 C PRO 464 -17.605 72.172 -27.482 1.00 3.00 C ATOM 1796 O PRO 464 -18.288 71.228 -27.831 1.00 3.00 O ATOM 1797 N LEU 465 -17.791 72.827 -26.346 1.00 3.00 N ATOM 1798 CA LEU 465 -18.801 72.425 -25.377 1.00 3.00 C ATOM 1799 C LEU 465 -20.120 72.106 -26.050 1.00 3.00 C ATOM 1800 O LEU 465 -20.698 71.073 -25.772 1.00 3.00 O ATOM 1801 N ASP 466 -20.572 72.981 -26.948 1.00 3.00 N ATOM 1802 CA ASP 466 -21.847 72.802 -27.697 1.00 3.00 C ATOM 1803 C ASP 466 -22.138 71.362 -28.102 1.00 3.00 C ATOM 1804 O ASP 466 -23.276 70.934 -28.059 1.00 3.00 O ATOM 1805 N ARG 467 -21.079 70.643 -28.478 1.00 3.00 N ATOM 1806 CA ARG 467 -21.121 69.303 -29.032 1.00 3.00 C ATOM 1807 C ARG 467 -20.842 68.398 -27.842 1.00 3.00 C ATOM 1808 O ARG 467 -21.702 67.644 -27.389 1.00 3.00 O ATOM 1809 N LEU 468 -19.621 68.488 -27.317 1.00 3.00 N ATOM 1810 CA LEU 468 -19.198 67.504 -26.302 1.00 3.00 C ATOM 1811 C LEU 468 -19.770 67.737 -24.918 1.00 3.00 C ATOM 1812 O LEU 468 -19.540 66.892 -24.068 1.00 3.00 O ATOM 1813 N ASP 469 -20.511 68.837 -24.713 1.00 3.00 N ATOM 1814 CA ASP 469 -21.218 69.016 -23.446 1.00 3.00 C ATOM 1815 C ASP 469 -22.728 68.828 -23.615 1.00 3.00 C ATOM 1816 O ASP 469 -23.475 69.128 -22.675 1.00 3.00 O ATOM 1817 N GLU 470 -23.162 68.403 -24.794 1.00 9.00 N ATOM 1818 CA GLU 470 -24.595 68.189 -25.017 1.00 9.00 C ATOM 1819 C GLU 470 -25.108 67.006 -24.227 1.00 9.00 C ATOM 1820 O GLU 470 -24.479 65.937 -24.196 1.00 9.00 O ATOM 1821 N GLU 471 -26.281 67.131 -23.654 1.00 9.00 N ATOM 1822 CA GLU 471 -26.965 66.275 -22.726 1.00 9.00 C ATOM 1823 C GLU 471 -26.474 66.490 -21.302 1.00 9.00 C ATOM 1824 O GLU 471 -25.303 66.837 -21.069 1.00 9.00 O ATOM 1825 N PRO 472 -27.372 66.217 -20.342 1.00 9.00 N ATOM 1826 CA PRO 472 -27.000 66.290 -18.929 1.00 9.00 C ATOM 1827 C PRO 472 -25.866 65.341 -18.586 1.00 9.00 C ATOM 1828 O PRO 472 -25.016 65.698 -17.773 1.00 9.00 O ATOM 1829 N THR 473 -25.803 64.166 -19.219 1.00 9.00 N ATOM 1830 CA THR 473 -24.706 63.238 -18.941 1.00 9.00 C ATOM 1831 C THR 473 -23.368 63.871 -19.287 1.00 9.00 C ATOM 1832 O THR 473 -22.423 63.821 -18.482 1.00 9.00 O ATOM 1833 N ARG 474 -23.229 64.450 -20.482 1.00 9.00 N ATOM 1834 CA ARG 474 -21.930 64.968 -20.897 1.00 9.00 C ATOM 1835 C ARG 474 -21.579 66.217 -20.095 1.00 9.00 C ATOM 1836 O ARG 474 -20.444 66.380 -19.627 1.00 9.00 O ATOM 1837 N SER 475 -22.570 67.079 -19.861 1.00 3.00 N ATOM 1838 CA SER 475 -22.328 68.281 -19.049 1.00 3.00 C ATOM 1839 C SER 475 -21.863 67.893 -17.642 1.00 3.00 C ATOM 1840 O SER 475 -20.902 68.455 -17.117 1.00 3.00 O ATOM 1841 N ALA 476 -22.512 66.923 -17.017 1.00 3.00 N ATOM 1842 CA ALA 476 -22.115 66.451 -15.683 1.00 3.00 C ATOM 1843 C ALA 476 -20.695 65.894 -15.698 1.00 3.00 C ATOM 1844 O ALA 476 -19.927 66.132 -14.757 1.00 3.00 O ATOM 1845 N SER 477 -20.325 65.148 -16.750 1.00 3.00 N ATOM 1846 CA SER 477 -18.970 64.590 -16.786 1.00 3.00 C ATOM 1847 C SER 477 -17.896 64.807 -17.848 1.00 3.00 C ATOM 1848 O SER 477 -16.703 64.757 -17.540 1.00 3.00 O ATOM 1849 N ILE 478 -18.327 65.064 -19.083 1.00 3.00 N ATOM 1850 CA ILE 478 -17.416 65.262 -20.207 1.00 3.00 C ATOM 1851 C ILE 478 -16.562 66.502 -19.992 1.00 3.00 C ATOM 1852 O ILE 478 -15.337 66.469 -20.175 1.00 3.00 O ATOM 1853 N TRP 479 -17.211 67.589 -19.596 1.00 3.00 N ATOM 1854 CA TRP 479 -16.503 68.836 -19.317 1.00 3.00 C ATOM 1855 C TRP 479 -15.576 68.734 -18.097 1.00 3.00 C ATOM 1856 O TRP 479 -14.445 69.229 -18.152 1.00 3.00 O ATOM 1857 N ASP 480 -16.037 68.093 -17.016 1.00 3.00 N ATOM 1858 CA ASP 480 -15.170 67.849 -15.839 1.00 3.00 C ATOM 1859 C ASP 480 -13.952 66.961 -16.102 1.00 3.00 C ATOM 1860 O ASP 480 -12.856 67.279 -15.632 1.00 3.00 O ATOM 1861 N ILE 481 -14.156 65.868 -16.839 1.00 3.00 N ATOM 1862 CA ILE 481 -13.068 65.023 -17.288 1.00 3.00 C ATOM 1863 C ILE 481 -12.094 65.862 -18.094 1.00 3.00 C ATOM 1864 O ILE 481 -10.929 65.991 -17.727 1.00 3.00 O ATOM 1865 N THR 482 -12.572 66.462 -19.181 1.00 3.00 N ATOM 1866 CA THR 482 -11.733 67.338 -20.015 1.00 3.00 C ATOM 1867 C THR 482 -11.028 68.451 -19.255 1.00 3.00 C ATOM 1868 O THR 482 -9.854 68.695 -19.486 1.00 3.00 O ATOM 1869 N CYS 483 -11.741 69.109 -18.351 1.00 3.00 N ATOM 1870 CA CYS 483 -11.163 70.173 -17.526 1.00 3.00 C ATOM 1871 C CYS 483 -9.952 69.671 -16.780 1.00 3.00 C ATOM 1872 O CYS 483 -8.874 70.270 -16.842 1.00 3.00 O ATOM 1873 N ASP 484 -10.144 68.562 -16.073 1.00 3.00 N ATOM 1874 CA ASP 484 -9.074 67.933 -15.345 1.00 3.00 C ATOM 1875 C ASP 484 -7.854 67.705 -16.253 1.00 3.00 C ATOM 1876 O ASP 484 -6.731 67.922 -15.831 1.00 3.00 O ATOM 1877 N SER 485 -8.074 67.304 -17.503 1.00 3.00 N ATOM 1878 CA SER 485 -6.979 67.055 -18.445 1.00 3.00 C ATOM 1879 C SER 485 -6.179 68.299 -18.842 1.00 3.00 C ATOM 1880 O SER 485 -5.007 68.205 -19.195 1.00 3.00 O ATOM 1881 N ASP 486 -6.802 69.466 -18.800 1.00 3.00 N ATOM 1882 CA ASP 486 -6.101 70.699 -19.153 1.00 3.00 C ATOM 1883 C ASP 486 -6.435 71.224 -20.541 1.00 3.00 C ATOM 1884 O ASP 486 -5.742 72.128 -21.037 1.00 3.00 O ATOM 1885 N GLY 487 -7.487 70.680 -21.170 1.00 3.00 N ATOM 1886 CA GLY 487 -8.021 71.302 -22.367 1.00 3.00 C ATOM 1887 C GLY 487 -8.575 72.708 -22.097 1.00 3.00 C ATOM 1888 O GLY 487 -8.969 73.061 -20.981 1.00 3.00 O ATOM 1889 N GLU 488 -8.601 73.510 -23.152 1.00 3.00 N ATOM 1890 CA GLU 488 -9.386 74.727 -23.175 1.00 3.00 C ATOM 1891 C GLU 488 -10.780 74.356 -23.624 1.00 3.00 C ATOM 1892 O GLU 488 -11.044 73.202 -23.924 1.00 3.00 O ATOM 1893 N ILE 489 -11.670 75.339 -23.665 1.00 3.00 N ATOM 1894 CA ILE 489 -13.078 75.115 -23.945 1.00 3.00 C ATOM 1895 C ILE 489 -13.553 76.175 -24.861 1.00 3.00 C ATOM 1896 O ILE 489 -13.171 77.328 -24.722 1.00 3.00 O ATOM 1897 N SER 490 -14.377 75.759 -25.811 1.00 3.00 N ATOM 1898 CA SER 490 -15.075 76.636 -26.744 1.00 3.00 C ATOM 1899 C SER 490 -16.544 76.790 -26.293 1.00 3.00 C ATOM 1900 O SER 490 -17.371 75.841 -26.431 1.00 3.00 O ATOM 1901 N TYR 491 -16.865 77.981 -25.765 1.00 3.00 N ATOM 1902 CA TYR 491 -18.252 78.306 -25.384 1.00 3.00 C ATOM 1903 C TYR 491 -18.888 79.286 -26.349 1.00 3.00 C ATOM 1904 O TYR 491 -18.206 80.150 -26.897 1.00 3.00 O ATOM 1905 N SER 492 -20.185 79.126 -26.579 1.00 3.00 N ATOM 1906 CA SER 492 -20.907 79.968 -27.529 1.00 3.00 C ATOM 1907 C SER 492 -22.075 80.704 -26.887 1.00 3.00 C ATOM 1908 O SER 492 -22.717 81.547 -27.538 1.00 3.00 O ATOM 1909 N LYS 493 -22.349 80.407 -25.619 1.00 3.00 N ATOM 1910 CA LYS 493 -23.372 81.128 -24.899 1.00 3.00 C ATOM 1911 C LYS 493 -22.978 81.349 -23.470 1.00 3.00 C ATOM 1912 O LYS 493 -22.186 80.609 -22.921 1.00 3.00 O ATOM 1913 N ASP 494 -23.551 82.380 -22.869 1.00 3.00 N ATOM 1914 CA ASP 494 -23.469 82.605 -21.448 1.00 3.00 C ATOM 1915 C ASP 494 -23.613 81.279 -20.701 1.00 3.00 C ATOM 1916 O ASP 494 -22.794 80.946 -19.876 1.00 3.00 O ATOM 1917 N LYS 495 -24.630 80.498 -21.011 1.00 3.00 N ATOM 1918 CA LYS 495 -24.845 79.273 -20.264 1.00 3.00 C ATOM 1919 C LYS 495 -23.445 78.710 -20.438 1.00 3.00 C ATOM 1920 O LYS 495 -23.072 77.707 -19.811 1.00 3.00 O ATOM 1921 N PRO 496 -22.600 79.404 -21.207 1.00 3.00 N ATOM 1922 CA PRO 496 -21.183 79.048 -21.266 1.00 3.00 C ATOM 1923 C PRO 496 -20.575 79.160 -19.880 1.00 3.00 C ATOM 1924 O PRO 496 -19.769 78.323 -19.467 1.00 3.00 O ATOM 1925 N LEU 497 -20.992 80.163 -19.088 1.00 3.00 N ATOM 1926 CA LEU 497 -20.449 80.367 -17.750 1.00 3.00 C ATOM 1927 C LEU 497 -20.765 79.251 -16.762 1.00 3.00 C ATOM 1928 O LEU 497 -20.005 79.130 -15.783 1.00 3.00 O ATOM 1929 N PHE 498 -21.691 78.343 -17.038 1.00 3.00 N ATOM 1930 CA PHE 498 -21.985 77.204 -16.174 1.00 3.00 C ATOM 1931 C PHE 498 -20.841 76.203 -16.124 1.00 3.00 C ATOM 1932 O PHE 498 -20.810 75.337 -15.249 1.00 3.00 O ATOM 1933 N LEU 499 -19.855 76.312 -17.005 1.00 3.00 N ATOM 1934 CA LEU 499 -18.620 75.571 -16.952 1.00 3.00 C ATOM 1935 C LEU 499 -17.547 76.235 -16.100 1.00 3.00 C ATOM 1936 O LEU 499 -16.418 75.723 -16.073 1.00 3.00 O ATOM 1937 N HIS 500 -17.797 77.389 -15.488 1.00 3.00 N ATOM 1938 CA HIS 500 -16.731 78.121 -14.810 1.00 3.00 C ATOM 1939 C HIS 500 -17.205 77.469 -13.530 1.00 3.00 C ATOM 1940 O HIS 500 -16.469 77.427 -12.558 1.00 3.00 O ATOM 1941 N ASP 501 -18.422 76.958 -13.517 1.00 3.00 N ATOM 1942 CA ASP 501 -18.926 76.244 -12.375 1.00 3.00 C ATOM 1943 C ASP 501 -18.186 74.936 -12.183 1.00 3.00 C ATOM 1944 O ASP 501 -18.568 74.167 -11.312 1.00 3.00 O ATOM 1945 N VAL 502 -17.182 74.639 -13.012 1.00 3.00 N ATOM 1946 CA VAL 502 -16.331 73.465 -12.769 1.00 3.00 C ATOM 1947 C VAL 502 -14.940 73.936 -12.429 1.00 3.00 C ATOM 1948 O VAL 502 -13.986 73.160 -12.430 1.00 3.00 O ATOM 1949 N ASP 503 -14.840 75.226 -12.140 1.00 3.00 N ATOM 1950 CA ASP 503 -13.604 75.816 -11.676 1.00 3.00 C ATOM 1951 C ASP 503 -12.522 76.044 -12.718 1.00 3.00 C ATOM 1952 O ASP 503 -11.386 76.386 -12.363 1.00 3.00 O ATOM 1953 N VAL 504 -12.846 75.843 -13.992 1.00 3.00 N ATOM 1954 CA VAL 504 -11.955 76.236 -15.090 1.00 3.00 C ATOM 1955 C VAL 504 -11.766 77.767 -15.056 1.00 3.00 C ATOM 1956 O VAL 504 -12.728 78.521 -15.028 1.00 3.00 O ATOM 1957 N GLU 505 -10.530 78.238 -14.981 1.00 3.00 N ATOM 1958 CA GLU 505 -10.338 79.674 -15.098 1.00 3.00 C ATOM 1959 C GLU 505 -10.651 80.205 -16.502 1.00 3.00 C ATOM 1960 O GLU 505 -10.513 79.452 -17.482 1.00 3.00 O ATOM 1961 N LYS 506 -11.052 81.492 -16.610 1.00 3.00 N ATOM 1962 CA LYS 506 -11.401 82.138 -17.875 1.00 3.00 C ATOM 1963 C LYS 506 -10.317 82.122 -18.971 1.00 3.00 C ATOM 1964 O LYS 506 -10.645 82.049 -20.163 1.00 3.00 O ATOM 1965 N GLU 507 -9.049 82.189 -18.593 1.00 3.00 N ATOM 1966 CA GLU 507 -7.960 82.103 -19.574 1.00 3.00 C ATOM 1967 C GLU 507 -8.076 80.852 -20.457 1.00 3.00 C ATOM 1968 O GLU 507 -7.519 80.802 -21.549 1.00 3.00 O ATOM 1969 N ASN 508 -8.821 79.856 -19.984 1.00 3.00 N ATOM 1970 CA ASN 508 -8.996 78.588 -20.707 1.00 3.00 C ATOM 1971 C ASN 508 -10.319 78.484 -21.471 1.00 3.00 C ATOM 1972 O ASN 508 -10.780 77.388 -21.783 1.00 3.00 O ATOM 1973 N TYR 509 -10.918 79.633 -21.775 1.00 3.00 N ATOM 1974 CA TYR 509 -12.212 79.694 -22.450 1.00 3.00 C ATOM 1975 C TYR 509 -12.054 80.588 -23.659 1.00 3.00 C ATOM 1976 O TYR 509 -11.416 81.624 -23.562 1.00 3.00 O ATOM 1977 N PHE 510 -12.600 80.200 -24.799 1.00 3.00 N ATOM 1978 CA PHE 510 -12.784 81.165 -25.912 1.00 3.00 C ATOM 1979 C PHE 510 -13.550 81.872 -27.010 1.00 3.00 C ATOM 1980 O PHE 510 -13.271 83.067 -27.306 1.00 3.00 O ATOM 1981 N LEU 511 -14.502 81.200 -27.636 1.00 3.00 N ATOM 1982 CA LEU 511 -15.292 81.783 -28.707 1.00 3.00 C ATOM 1983 C LEU 511 -16.018 83.018 -28.235 1.00 3.00 C ATOM 1984 O LEU 511 -16.150 84.055 -28.898 1.00 3.00 O ATOM 1985 N GLY 512 -16.538 82.954 -26.976 1.00 3.00 N ATOM 1986 CA GLY 512 -17.246 84.072 -26.382 1.00 3.00 C ATOM 1987 C GLY 512 -16.287 85.218 -26.006 1.00 3.00 C ATOM 1988 O GLY 512 -16.605 86.416 -26.263 1.00 3.00 O ATOM 1989 N PHE 513 -15.109 84.907 -25.474 1.00 3.00 N ATOM 1990 CA PHE 513 -14.130 85.968 -25.197 1.00 3.00 C ATOM 1991 C PHE 513 -13.648 86.611 -26.468 1.00 3.00 C ATOM 1992 O PHE 513 -13.331 87.840 -26.479 1.00 3.00 O ATOM 1993 N PHE 514 -13.507 85.882 -27.552 1.00 3.00 N ATOM 1994 CA PHE 514 -12.868 86.233 -28.790 1.00 3.00 C ATOM 1995 C PHE 514 -13.901 86.390 -29.873 1.00 3.00 C ATOM 1996 O PHE 514 -14.896 87.104 -29.717 1.00 3.00 O ATOM 1997 N LEU 515 -13.677 85.780 -31.050 1.00 3.00 N ATOM 1998 CA LEU 515 -14.584 85.906 -32.181 1.00 3.00 C ATOM 1999 C LEU 515 -15.554 86.899 -32.827 1.00 3.00 C ATOM 2000 O LEU 515 -16.501 87.339 -32.165 1.00 3.00 O ATOM 2001 N VAL 516 -15.307 87.285 -34.079 1.00 3.00 N ATOM 2002 CA VAL 516 -16.208 88.177 -34.810 1.00 3.00 C ATOM 2003 C VAL 516 -16.013 87.991 -36.299 1.00 3.00 C ATOM 2004 O VAL 516 -15.053 87.342 -36.735 1.00 3.00 O ATOM 2005 N GLY 517 -16.926 88.555 -37.082 1.00 3.00 N ATOM 2006 CA GLY 517 -16.772 88.603 -38.530 1.00 3.00 C ATOM 2007 C GLY 517 -17.742 89.605 -39.184 1.00 3.00 C ATOM 2008 O GLY 517 -17.963 89.567 -40.392 1.00 3.00 O ATOM 2009 N ALA 518 -18.329 90.488 -38.388 1.00 3.00 N ATOM 2010 CA ALA 518 -19.071 91.627 -38.941 1.00 3.00 C ATOM 2011 C ALA 518 -18.641 92.979 -38.361 1.00 3.00 C ATOM 2012 O ALA 518 -18.164 93.064 -37.225 1.00 3.00 O ATOM 2013 N TYR 519 -18.813 94.038 -39.142 1.00 3.00 N ATOM 2014 CA TYR 519 -18.536 95.365 -38.624 1.00 3.00 C ATOM 2015 C TYR 519 -19.458 95.667 -37.442 1.00 3.00 C ATOM 2016 O TYR 519 -18.998 96.183 -36.423 1.00 3.00 O ATOM 2017 N GLN 520 -20.736 95.305 -37.558 1.00 3.00 N ATOM 2018 CA GLN 520 -21.695 95.440 -36.451 1.00 3.00 C ATOM 2019 C GLN 520 -21.205 94.746 -35.166 1.00 3.00 C ATOM 2020 O GLN 520 -21.257 95.310 -34.073 1.00 3.00 O ATOM 2021 N GLU 521 -20.710 93.524 -35.319 1.00 3.00 N ATOM 2022 CA GLU 521 -20.136 92.790 -34.216 1.00 3.00 C ATOM 2023 C GLU 521 -19.148 93.642 -33.505 1.00 3.00 C ATOM 2024 O GLU 521 -19.204 93.740 -32.280 1.00 3.00 O ATOM 2025 N VAL 522 -18.249 94.258 -34.270 1.00 3.00 N ATOM 2026 CA VAL 522 -17.234 95.147 -33.709 1.00 3.00 C ATOM 2027 C VAL 522 -17.836 96.305 -32.927 1.00 3.00 C ATOM 2028 O VAL 522 -17.363 96.626 -31.831 1.00 3.00 O ATOM 2029 N LEU 523 -18.878 96.922 -33.482 1.00 3.00 N ATOM 2030 CA LEU 523 -19.515 98.015 -32.800 1.00 3.00 C ATOM 2031 C LEU 523 -20.811 98.158 -31.974 1.00 3.00 C ATOM 2032 O LEU 523 -20.779 98.718 -30.900 1.00 3.00 O ATOM 2033 N GLY 524 -21.948 97.744 -32.513 1.00 3.00 N ATOM 2034 CA GLY 524 -23.202 97.809 -31.768 1.00 3.00 C ATOM 2035 C GLY 524 -22.956 97.028 -30.461 1.00 3.00 C ATOM 2036 O GLY 524 -23.098 97.562 -29.354 1.00 3.00 O ATOM 2037 N MET 525 -22.554 95.776 -30.595 1.00 3.00 N ATOM 2038 CA MET 525 -22.244 94.984 -29.415 1.00 3.00 C ATOM 2039 C MET 525 -20.945 95.566 -28.795 1.00 3.00 C ATOM 2040 O MET 525 -20.942 95.938 -27.625 1.00 3.00 O ATOM 2041 N LYS 526 -19.893 95.733 -29.604 1.00 9.00 N ATOM 2042 CA LYS 526 -18.616 96.237 -29.099 1.00 9.00 C ATOM 2043 C LYS 526 -18.700 97.562 -28.341 1.00 9.00 C ATOM 2044 O LYS 526 -17.954 97.781 -27.384 1.00 9.00 O ATOM 2045 N HIS 527 -19.615 98.419 -28.742 1.00 3.00 N ATOM 2046 CA HIS 527 -19.831 99.708 -28.062 1.00 3.00 C ATOM 2047 C HIS 527 -20.701 99.417 -26.844 1.00 3.00 C ATOM 2048 O HIS 527 -20.426 99.898 -25.747 1.00 3.00 O ATOM 2049 N ASN 528 -21.711 98.588 -27.038 1.00 3.00 N ATOM 2050 CA ASN 528 -22.596 98.215 -25.946 1.00 3.00 C ATOM 2051 C ASN 528 -21.767 97.538 -24.837 1.00 3.00 C ATOM 2052 O ASN 528 -21.948 97.800 -23.652 1.00 3.00 O ATOM 2053 N LEU 529 -20.757 96.783 -25.252 1.00 3.00 N ATOM 2054 CA LEU 529 -19.877 96.065 -24.335 1.00 3.00 C ATOM 2055 C LEU 529 -18.644 95.417 -23.716 1.00 3.00 C ATOM 2056 O LEU 529 -18.723 94.925 -22.584 1.00 3.00 O ATOM 2057 N PHE 530 -17.511 95.424 -24.428 1.00 3.00 N ATOM 2058 CA PHE 530 -16.335 94.680 -23.986 1.00 3.00 C ATOM 2059 C PHE 530 -15.191 94.417 -23.026 1.00 3.00 C ATOM 2060 O PHE 530 -14.504 95.337 -22.616 1.00 3.00 O ATOM 2061 N THR 531 -14.965 93.144 -22.702 1.00 3.00 N ATOM 2062 CA THR 531 -13.888 92.803 -21.776 1.00 3.00 C ATOM 2063 C THR 531 -12.531 92.579 -22.430 1.00 3.00 C ATOM 2064 O THR 531 -11.514 92.456 -21.740 1.00 3.00 O ATOM 2065 N HIS 532 -12.510 92.558 -23.764 1.00 3.00 N ATOM 2066 CA HIS 532 -11.265 92.315 -24.484 1.00 3.00 C ATOM 2067 C HIS 532 -10.830 93.446 -25.415 1.00 3.00 C ATOM 2068 O HIS 532 -10.230 93.194 -26.450 1.00 3.00 O ATOM 2069 N PRO 533 -11.134 94.678 -25.048 1.00 9.00 N ATOM 2070 CA PRO 533 -10.725 95.796 -25.871 1.00 9.00 C ATOM 2071 C PRO 533 -11.499 95.992 -27.157 1.00 9.00 C ATOM 2072 O PRO 533 -10.982 96.584 -28.103 1.00 9.00 O ATOM 2073 N THR 534 -12.722 95.470 -27.188 1.00 3.00 N ATOM 2074 CA THR 534 -13.615 95.596 -28.346 1.00 3.00 C ATOM 2075 C THR 534 -13.191 94.920 -29.661 1.00 3.00 C ATOM 2076 O THR 534 -13.729 95.240 -30.720 1.00 3.00 O ATOM 2077 N GLU 535 -12.263 93.965 -29.567 1.00 3.00 N ATOM 2078 CA GLU 535 -11.790 93.212 -30.733 1.00 3.00 C ATOM 2079 C GLU 535 -11.234 91.865 -30.277 1.00 3.00 C ATOM 2080 O GLU 535 -10.796 91.720 -29.125 1.00 3.00 O ATOM 2081 N ALA 536 -11.297 90.864 -31.150 1.00 3.00 N ATOM 2082 CA ALA 536 -10.773 89.544 -30.858 1.00 3.00 C ATOM 2083 C ALA 536 -10.043 88.630 -31.798 1.00 3.00 C ATOM 2084 O ALA 536 -8.944 88.901 -32.224 1.00 3.00 O ATOM 2085 N ILE 537 -10.671 87.521 -32.120 1.00 3.00 N ATOM 2086 CA ILE 537 -10.196 86.665 -33.176 1.00 3.00 C ATOM 2087 C ILE 537 -11.105 86.841 -34.387 1.00 3.00 C ATOM 2088 O ILE 537 -12.319 86.713 -34.284 1.00 3.00 O ATOM 2089 N ILE 538 -10.530 87.172 -35.528 1.00 3.00 N ATOM 2090 CA ILE 538 -11.325 87.386 -36.727 1.00 3.00 C ATOM 2091 C ILE 538 -11.556 86.043 -37.374 1.00 3.00 C ATOM 2092 O ILE 538 -10.617 85.301 -37.602 1.00 3.00 O ATOM 2093 N SER 539 -12.802 85.727 -37.674 1.00 3.00 N ATOM 2094 CA SER 539 -13.157 84.428 -38.275 1.00 3.00 C ATOM 2095 C SER 539 -13.853 83.161 -37.766 1.00 3.00 C ATOM 2096 O SER 539 -13.721 82.084 -38.367 1.00 3.00 O ATOM 2097 N ILE 540 -14.589 83.290 -36.674 1.00 3.00 N ATOM 2098 CA ILE 540 -15.332 82.156 -36.124 1.00 3.00 C ATOM 2099 C ILE 540 -16.690 82.077 -36.808 1.00 3.00 C ATOM 2100 O ILE 540 -17.153 83.036 -37.418 1.00 3.00 O ATOM 2101 N ASN 541 -17.355 80.927 -36.663 1.00 3.00 N ATOM 2102 CA ASN 541 -18.651 80.749 -37.287 1.00 3.00 C ATOM 2103 C ASN 541 -18.519 80.144 -38.672 1.00 3.00 C ATOM 2104 O ASN 541 -17.467 80.249 -39.301 1.00 3.00 O ATOM 2105 N GLU 542 -19.590 79.531 -39.188 1.00 3.00 N ATOM 2106 CA GLU 542 -19.584 78.896 -40.517 1.00 3.00 C ATOM 2107 C GLU 542 -19.290 79.762 -41.745 1.00 3.00 C ATOM 2108 O GLU 542 -18.323 79.495 -42.465 1.00 3.00 O ATOM 2109 N LYS 543 -20.088 80.812 -42.011 1.00 3.00 N ATOM 2110 CA LYS 543 -19.807 81.622 -43.198 1.00 3.00 C ATOM 2111 C LYS 543 -18.436 82.324 -43.272 1.00 3.00 C ATOM 2112 O LYS 543 -17.774 82.271 -44.299 1.00 3.00 O ATOM 2113 N GLY 544 -18.008 82.957 -42.176 1.00 3.00 N ATOM 2114 CA GLY 544 -16.718 83.647 -42.192 1.00 3.00 C ATOM 2115 C GLY 544 -16.510 84.880 -43.059 1.00 3.00 C ATOM 2116 O GLY 544 -17.048 84.990 -44.158 1.00 3.00 O ATOM 2117 N TYR 545 -15.716 85.822 -42.569 1.00 3.00 N ATOM 2118 CA TYR 545 -15.387 86.993 -43.378 1.00 3.00 C ATOM 2119 C TYR 545 -14.429 86.591 -44.495 1.00 3.00 C ATOM 2120 O TYR 545 -13.490 85.822 -44.263 1.00 3.00 O ATOM 2121 N GLU 546 -14.674 87.105 -45.700 1.00 3.00 N ATOM 2122 CA GLU 546 -13.750 86.918 -46.814 1.00 3.00 C ATOM 2123 C GLU 546 -12.519 87.796 -46.639 1.00 3.00 C ATOM 2124 O GLU 546 -12.437 88.569 -45.698 1.00 3.00 O ATOM 2125 N VAL 547 -11.550 87.668 -47.529 1.00 3.00 N ATOM 2126 CA VAL 547 -10.356 88.461 -47.402 1.00 3.00 C ATOM 2127 C VAL 547 -10.612 89.977 -47.623 1.00 3.00 C ATOM 2128 O VAL 547 -9.993 90.817 -46.952 1.00 3.00 O ATOM 2129 N GLU 548 -11.533 90.323 -48.530 1.00 3.00 N ATOM 2130 CA GLU 548 -11.893 91.733 -48.748 1.00 3.00 C ATOM 2131 C GLU 548 -12.522 92.319 -47.495 1.00 3.00 C ATOM 2132 O GLU 548 -12.195 93.429 -47.096 1.00 3.00 O ATOM 2133 N GLY 549 -13.428 91.576 -46.874 1.00 3.00 N ATOM 2134 CA GLY 549 -14.026 92.037 -45.626 1.00 3.00 C ATOM 2135 C GLY 549 -13.242 92.834 -44.549 1.00 3.00 C ATOM 2136 O GLY 549 -13.833 93.683 -43.839 1.00 3.00 O ATOM 2137 N ILE 550 -11.943 92.570 -44.385 1.00 3.00 N ATOM 2138 CA ILE 550 -11.174 93.404 -43.459 1.00 3.00 C ATOM 2139 C ILE 550 -10.956 94.776 -44.126 1.00 3.00 C ATOM 2140 O ILE 550 -10.916 94.891 -45.363 1.00 3.00 O ATOM 2141 N ILE 551 -10.816 95.831 -43.324 1.00 3.00 N ATOM 2142 CA ILE 551 -10.563 97.167 -43.880 1.00 3.00 C ATOM 2143 C ILE 551 -9.221 97.695 -43.423 1.00 3.00 C ATOM 2144 O ILE 551 -8.542 97.023 -42.645 1.00 3.00 O ATOM 2145 N GLU 552 -8.860 98.892 -43.884 1.00 9.00 N ATOM 2146 CA GLU 552 -7.561 99.464 -43.558 1.00 9.00 C ATOM 2147 C GLU 552 -6.623 99.118 -44.701 1.00 9.00 C ATOM 2148 O GLU 552 -6.923 98.290 -45.567 1.00 9.00 O ATOM 2149 N ALA 553 -5.406 99.681 -44.694 1.00 9.00 N ATOM 2150 CA ALA 553 -4.408 99.438 -45.745 1.00 9.00 C ATOM 2151 C ALA 553 -4.017 97.993 -45.967 1.00 9.00 C ATOM 2152 O ALA 553 -3.659 97.602 -47.085 1.00 9.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 456 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 364 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 112 ARMSMC SURFACE . . . . . . . . 0.00 0.0 0 0.0 196 ARMSMC BURIED . . . . . . . . 0.00 0.0 0 0.0 168 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 164 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 153 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 91 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 73 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 138 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 108 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 43 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 81 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 57 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 64 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 56 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 45 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 16 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 4 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 16.65 (Number of atoms: 114) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 16.65 114 62.3 183 CRMSCA CRN = ALL/NP . . . . . 0.1460 CRMSCA SECONDARY STRUCTURE . . 11.61 24 42.9 56 CRMSCA SURFACE . . . . . . . . 17.54 63 63.6 99 CRMSCA BURIED . . . . . . . . 15.48 51 60.7 84 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 16.53 456 50.5 903 CRMSMC SECONDARY STRUCTURE . . 11.73 96 34.5 278 CRMSMC SURFACE . . . . . . . . 17.40 252 51.4 490 CRMSMC BURIED . . . . . . . . 15.40 204 49.4 413 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 758 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 660 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 233 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 434 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 324 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 16.53 456 30.6 1490 CRMSALL SECONDARY STRUCTURE . . 11.73 96 21.0 457 CRMSALL SURFACE . . . . . . . . 17.40 252 30.4 830 CRMSALL BURIED . . . . . . . . 15.40 204 30.9 660 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.786 0.592 0.307 114 62.3 183 ERRCA SECONDARY STRUCTURE . . 7.875 0.533 0.266 24 42.9 56 ERRCA SURFACE . . . . . . . . 12.622 0.611 0.323 63 63.6 99 ERRCA BURIED . . . . . . . . 10.755 0.569 0.287 51 60.7 84 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.684 0.590 0.306 456 50.5 903 ERRMC SECONDARY STRUCTURE . . 8.004 0.538 0.269 96 34.5 278 ERRMC SURFACE . . . . . . . . 12.522 0.610 0.321 252 51.4 490 ERRMC BURIED . . . . . . . . 10.650 0.565 0.288 204 49.4 413 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 758 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 660 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 233 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 434 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 324 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.684 0.590 0.306 456 30.6 1490 ERRALL SECONDARY STRUCTURE . . 8.004 0.538 0.269 96 21.0 457 ERRALL SURFACE . . . . . . . . 12.522 0.610 0.321 252 30.4 830 ERRALL BURIED . . . . . . . . 10.650 0.565 0.288 204 30.9 660 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 3 5 40 114 183 DISTCA CA (P) 0.00 0.55 1.64 2.73 21.86 183 DISTCA CA (RMS) 0.00 1.72 2.35 3.37 7.61 DISTCA ALL (N) 1 6 11 23 155 456 1490 DISTALL ALL (P) 0.07 0.40 0.74 1.54 10.40 1490 DISTALL ALL (RMS) 0.63 1.51 2.13 3.47 7.44 DISTALL END of the results output