####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS278_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS278_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 558 - 586 4.92 31.33 LONGEST_CONTINUOUS_SEGMENT: 29 559 - 587 4.87 30.61 LONGEST_CONTINUOUS_SEGMENT: 29 560 - 588 4.84 29.90 LCS_AVERAGE: 46.97 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 564 - 580 1.99 30.38 LONGEST_CONTINUOUS_SEGMENT: 17 565 - 581 1.62 30.57 LONGEST_CONTINUOUS_SEGMENT: 17 566 - 582 1.38 30.84 LCS_AVERAGE: 24.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 566 - 581 0.71 30.45 LCS_AVERAGE: 19.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 3 11 17 3 3 3 4 7 9 11 11 12 12 12 14 16 17 18 20 22 24 26 28 LCS_GDT S 555 S 555 9 11 17 3 5 9 10 10 10 11 11 12 12 12 14 15 16 18 18 19 21 24 24 LCS_GDT I 556 I 556 9 11 17 3 5 9 10 10 10 11 11 12 12 12 14 16 17 18 20 21 24 26 28 LCS_GDT L 557 L 557 9 11 26 3 8 9 10 10 10 11 11 12 12 12 14 15 17 18 18 21 22 26 28 LCS_GDT D 558 D 558 9 11 29 5 8 9 10 10 10 11 11 12 12 14 14 18 23 24 24 25 28 29 29 LCS_GDT T 559 T 559 9 11 29 6 8 9 10 10 10 11 11 12 19 21 23 24 24 26 27 27 28 29 29 LCS_GDT L 560 L 560 9 11 29 6 8 9 10 10 10 11 11 12 19 22 23 24 26 26 27 27 28 29 29 LCS_GDT E 561 E 561 9 11 29 6 8 9 10 10 10 15 20 21 21 24 24 25 26 26 27 27 28 29 29 LCS_GDT D 562 D 562 9 11 29 6 8 9 10 10 11 15 20 21 21 24 24 25 26 26 27 27 28 29 29 LCS_GDT L 563 L 563 9 11 29 6 8 9 10 15 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT D 564 D 564 9 17 29 6 8 9 10 10 14 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT Y 565 Y 565 3 17 29 3 3 3 4 7 13 18 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT D 566 D 566 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT I 567 I 567 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT H 568 H 568 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT A 569 A 569 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT I 570 I 570 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT M 571 M 571 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT D 572 D 572 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT I 573 I 573 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT L 574 L 574 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT N 575 N 575 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT E 576 E 576 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT R 577 R 577 16 17 29 10 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT I 578 I 578 16 17 29 8 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT S 579 S 579 16 17 29 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT N 580 N 580 16 17 29 5 13 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT S 581 S 581 16 17 29 5 13 16 16 16 18 18 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT K 582 K 582 4 17 29 3 4 4 5 8 11 14 18 19 21 23 23 25 26 26 27 27 28 29 29 LCS_GDT L 583 L 583 4 5 29 3 4 4 5 6 6 6 8 11 16 19 20 22 24 26 26 27 28 29 29 LCS_GDT V 584 V 584 4 16 29 3 4 4 6 12 16 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT N 585 N 585 15 16 29 9 14 15 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT D 586 D 586 15 16 29 9 14 15 15 15 15 19 22 22 22 24 24 25 26 26 27 27 28 29 29 LCS_GDT K 587 K 587 15 16 29 9 14 15 15 15 15 15 16 19 20 22 23 24 25 26 26 26 27 29 29 LCS_GDT Q 588 Q 588 15 16 29 11 14 15 15 15 15 15 16 19 20 21 23 24 25 26 26 26 27 29 29 LCS_GDT K 589 K 589 15 16 28 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 25 26 26 27 28 LCS_GDT K 590 K 590 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 26 26 27 28 LCS_GDT H 591 H 591 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 27 LCS_GDT I 592 I 592 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT L 593 L 593 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT G 594 G 594 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT E 595 E 595 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT L 596 L 596 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT Y 597 Y 597 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT L 598 L 598 15 16 25 11 14 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT F 599 F 599 15 16 25 4 13 15 15 15 15 15 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT L 600 L 600 3 16 25 3 3 3 4 5 6 6 9 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT N 601 N 601 4 6 25 3 3 5 5 5 6 6 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT D 602 D 602 4 6 25 3 3 5 5 5 6 12 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT N 603 N 603 4 6 25 3 3 5 5 5 6 7 16 19 20 21 21 22 23 24 24 25 25 26 26 LCS_GDT G 604 G 604 4 6 25 3 3 5 5 5 6 7 8 8 20 21 21 22 22 24 24 25 25 26 26 LCS_GDT Y 605 Y 605 4 6 25 3 4 5 5 5 6 7 8 16 20 21 21 22 22 23 24 25 25 26 26 LCS_GDT L 606 L 606 4 6 25 3 4 5 5 5 6 7 8 8 9 9 14 22 22 22 23 23 24 26 26 LCS_GDT K 607 K 607 4 6 24 3 4 5 5 5 6 7 8 8 9 9 9 10 10 10 10 15 21 23 24 LCS_GDT S 608 S 608 4 6 10 3 4 5 5 5 6 7 8 8 9 9 9 10 10 10 10 15 18 23 24 LCS_GDT I 609 I 609 3 6 10 0 3 3 5 5 6 7 8 8 9 9 9 10 10 10 10 10 10 12 12 LCS_AVERAGE LCS_A: 30.44 ( 19.99 24.36 46.97 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 14 16 16 16 18 19 22 22 22 24 24 25 26 26 27 27 28 29 29 GDT PERCENT_AT 21.43 25.00 28.57 28.57 28.57 32.14 33.93 39.29 39.29 39.29 42.86 42.86 44.64 46.43 46.43 48.21 48.21 50.00 51.79 51.79 GDT RMS_LOCAL 0.37 0.48 0.71 0.71 0.71 1.55 2.12 2.54 2.54 2.54 3.14 3.14 3.39 3.71 3.72 4.18 4.01 4.43 4.84 4.84 GDT RMS_ALL_AT 29.55 29.93 30.45 30.45 30.45 30.34 29.25 29.72 29.72 29.72 30.28 30.28 30.57 30.90 30.32 31.01 30.69 30.75 29.90 29.90 # Checking swapping # possible swapping detected: D 558 D 558 # possible swapping detected: E 561 E 561 # possible swapping detected: D 564 D 564 # possible swapping detected: E 576 E 576 # possible swapping detected: Y 605 Y 605 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 22.101 0 0.671 0.945 22.962 0.000 0.000 LGA S 555 S 555 22.092 0 0.631 0.634 23.359 0.000 0.000 LGA I 556 I 556 19.000 0 0.380 0.469 24.286 0.000 0.000 LGA L 557 L 557 17.555 0 0.069 1.303 22.425 0.000 0.000 LGA D 558 D 558 15.956 0 0.075 0.967 20.741 0.000 0.000 LGA T 559 T 559 13.460 0 0.052 0.110 17.139 0.357 0.204 LGA L 560 L 560 9.838 0 0.054 0.132 14.993 5.595 2.798 LGA E 561 E 561 7.379 0 0.084 0.656 11.507 14.048 7.249 LGA D 562 D 562 8.061 0 0.100 0.888 13.588 9.762 4.881 LGA L 563 L 563 3.423 0 0.227 0.273 5.388 42.143 40.655 LGA D 564 D 564 3.883 0 0.366 0.792 6.834 40.952 29.643 LGA Y 565 Y 565 4.333 0 0.636 0.551 16.503 48.810 17.500 LGA D 566 D 566 2.581 0 0.605 1.146 8.595 65.119 40.893 LGA I 567 I 567 3.102 0 0.058 1.199 6.340 53.571 49.583 LGA H 568 H 568 2.552 0 0.099 0.932 8.147 65.000 39.905 LGA A 569 A 569 1.246 0 0.085 0.085 1.701 79.286 81.524 LGA I 570 I 570 1.641 0 0.053 0.216 2.446 77.143 70.952 LGA M 571 M 571 1.693 0 0.060 0.799 5.074 77.143 64.286 LGA D 572 D 572 1.182 0 0.105 0.789 2.018 85.952 80.536 LGA I 573 I 573 0.808 0 0.042 1.625 4.040 90.476 75.536 LGA L 574 L 574 0.667 0 0.059 0.195 1.192 90.476 89.345 LGA N 575 N 575 0.769 0 0.046 1.166 4.945 90.476 77.619 LGA E 576 E 576 0.422 0 0.096 0.876 2.725 95.238 83.069 LGA R 577 R 577 1.123 0 0.054 0.770 6.964 81.548 58.442 LGA I 578 I 578 1.787 0 0.056 0.339 2.803 72.976 70.952 LGA S 579 S 579 1.105 0 0.041 0.637 2.050 81.429 80.159 LGA N 580 N 580 1.819 0 0.163 0.600 3.383 69.048 63.155 LGA S 581 S 581 3.317 0 0.549 0.833 4.275 50.476 49.365 LGA K 582 K 582 7.865 0 0.428 1.100 15.230 8.571 3.810 LGA L 583 L 583 9.098 0 0.183 0.267 14.603 4.286 2.143 LGA V 584 V 584 5.054 0 0.641 1.411 6.860 38.095 29.184 LGA N 585 N 585 0.877 0 0.575 1.353 4.889 60.952 56.667 LGA D 586 D 586 4.079 0 0.071 1.002 8.701 29.524 34.107 LGA K 587 K 587 10.055 0 0.066 1.320 20.076 2.500 1.111 LGA Q 588 Q 588 10.795 0 0.044 1.150 14.170 0.119 8.095 LGA K 589 K 589 12.484 0 0.075 0.782 16.973 0.000 0.000 LGA K 590 K 590 16.341 0 0.068 0.928 20.912 0.000 0.000 LGA H 591 H 591 20.331 0 0.040 1.042 24.593 0.000 0.000 LGA I 592 I 592 21.212 0 0.042 0.654 25.597 0.000 0.000 LGA L 593 L 593 24.622 0 0.056 0.212 29.129 0.000 0.000 LGA G 594 G 594 28.738 0 0.054 0.054 33.166 0.000 0.000 LGA E 595 E 595 31.687 0 0.090 0.832 35.327 0.000 0.000 LGA L 596 L 596 32.852 0 0.052 1.385 37.159 0.000 0.000 LGA Y 597 Y 597 36.617 0 0.050 0.661 41.195 0.000 0.000 LGA L 598 L 598 40.972 0 0.548 1.314 43.175 0.000 0.000 LGA F 599 F 599 43.310 0 0.540 1.194 47.774 0.000 0.000 LGA L 600 L 600 47.263 0 0.505 1.312 50.083 0.000 0.000 LGA N 601 N 601 51.575 0 0.556 1.199 55.329 0.000 0.000 LGA D 602 D 602 55.397 0 0.059 0.854 58.179 0.000 0.000 LGA N 603 N 603 59.604 0 0.273 1.393 60.726 0.000 0.000 LGA G 604 G 604 60.936 0 0.582 0.582 61.631 0.000 0.000 LGA Y 605 Y 605 64.519 0 0.292 0.267 66.945 0.000 0.000 LGA L 606 L 606 63.993 0 0.288 1.269 65.673 0.000 0.000 LGA K 607 K 607 66.053 0 0.550 1.489 69.502 0.000 0.000 LGA S 608 S 608 67.525 0 0.225 0.816 67.935 0.000 0.000 LGA I 609 I 609 67.532 0 0.473 0.927 69.224 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 21.992 21.843 22.211 27.341 23.453 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 22 2.54 35.268 32.626 0.834 LGA_LOCAL RMSD: 2.538 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 29.721 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 21.992 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.705253 * X + 0.663449 * Y + -0.249907 * Z + -57.816368 Y_new = -0.707659 * X + -0.637461 * Y + 0.304733 * Z + 166.787491 Z_new = 0.042869 * X + 0.391763 * Y + 0.919067 * Z + -39.236610 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.354492 -0.042882 0.402939 [DEG: -134.9024 -2.4570 23.0867 ] ZXZ: -2.454724 0.405090 0.108992 [DEG: -140.6453 23.2099 6.2448 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS278_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS278_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 22 2.54 32.626 21.99 REMARK ---------------------------------------------------------- MOLECULE T0547TS278_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REMARK PARENT 1twi_A 1wrl_A ATOM 4430 N GLN 554 -14.712 116.746 -39.023 1.00 0.00 N ATOM 4431 CA GLN 554 -14.653 117.375 -37.665 1.00 0.00 C ATOM 4432 C GLN 554 -15.328 116.512 -36.525 1.00 0.00 C ATOM 4433 O GLN 554 -14.969 116.680 -35.358 1.00 0.00 O ATOM 4434 CB GLN 554 -15.234 118.815 -37.761 1.00 0.00 C ATOM 4435 CG GLN 554 -15.141 119.643 -36.442 1.00 0.00 C ATOM 4436 CD GLN 554 -15.582 121.107 -36.488 1.00 0.00 C ATOM 4437 OE1 GLN 554 -16.088 121.625 -37.475 1.00 0.00 O ATOM 4438 NE2 GLN 554 -15.438 121.829 -35.410 1.00 0.00 N ATOM 4439 N SER 555 -16.292 115.614 -36.828 1.00 0.00 N ATOM 4440 CA SER 555 -16.966 114.760 -35.811 1.00 0.00 C ATOM 4441 C SER 555 -16.086 113.844 -34.905 1.00 0.00 C ATOM 4442 O SER 555 -16.254 113.842 -33.683 1.00 0.00 O ATOM 4443 CB SER 555 -18.144 113.998 -36.475 1.00 0.00 C ATOM 4444 OG SER 555 -17.716 112.850 -37.206 1.00 0.00 O ATOM 4445 N ILE 556 -15.132 113.119 -35.501 1.00 0.00 N ATOM 4446 CA ILE 556 -14.160 112.251 -34.751 1.00 0.00 C ATOM 4447 C ILE 556 -12.874 113.057 -34.285 1.00 0.00 C ATOM 4448 O ILE 556 -11.783 112.511 -34.130 1.00 0.00 O ATOM 4449 CB ILE 556 -13.959 110.981 -35.667 1.00 0.00 C ATOM 4450 CG1 ILE 556 -15.283 110.162 -35.875 1.00 0.00 C ATOM 4451 CG2 ILE 556 -12.856 109.983 -35.246 1.00 0.00 C ATOM 4452 CD1 ILE 556 -15.756 110.156 -37.335 1.00 0.00 C ATOM 4453 N LEU 557 -13.008 114.365 -34.002 1.00 0.00 N ATOM 4454 CA LEU 557 -11.907 115.265 -33.568 1.00 0.00 C ATOM 4455 C LEU 557 -12.433 116.252 -32.470 1.00 0.00 C ATOM 4456 O LEU 557 -11.976 116.178 -31.328 1.00 0.00 O ATOM 4457 CB LEU 557 -11.275 116.003 -34.790 1.00 0.00 C ATOM 4458 CG LEU 557 -10.595 115.173 -35.911 1.00 0.00 C ATOM 4459 CD1 LEU 557 -10.196 116.092 -37.072 1.00 0.00 C ATOM 4460 CD2 LEU 557 -9.334 114.440 -35.435 1.00 0.00 C ATOM 4461 N ASP 558 -13.411 117.133 -32.778 1.00 0.00 N ATOM 4462 CA ASP 558 -13.941 118.160 -31.831 1.00 0.00 C ATOM 4463 C ASP 558 -14.696 117.620 -30.561 1.00 0.00 C ATOM 4464 O ASP 558 -14.336 117.966 -29.432 1.00 0.00 O ATOM 4465 CB ASP 558 -14.777 119.159 -32.677 1.00 0.00 C ATOM 4466 CG ASP 558 -14.687 120.584 -32.173 1.00 0.00 C ATOM 4467 OD1 ASP 558 -15.318 120.934 -31.158 1.00 0.00 O ATOM 4468 OD2 ASP 558 -13.967 121.381 -32.808 1.00 0.00 O ATOM 4469 N THR 559 -15.733 116.772 -30.721 1.00 0.00 N ATOM 4470 CA THR 559 -16.421 116.111 -29.557 1.00 0.00 C ATOM 4471 C THR 559 -15.531 115.069 -28.795 1.00 0.00 C ATOM 4472 O THR 559 -15.637 114.974 -27.567 1.00 0.00 O ATOM 4473 CB THR 559 -17.837 115.618 -29.977 1.00 0.00 C ATOM 4474 OG1 THR 559 -18.623 116.745 -30.349 1.00 0.00 O ATOM 4475 CG2 THR 559 -18.656 114.928 -28.874 1.00 0.00 C ATOM 4476 N LEU 560 -14.647 114.322 -29.489 1.00 0.00 N ATOM 4477 CA LEU 560 -13.628 113.469 -28.818 1.00 0.00 C ATOM 4478 C LEU 560 -12.606 114.291 -27.948 1.00 0.00 C ATOM 4479 O LEU 560 -12.343 113.865 -26.821 1.00 0.00 O ATOM 4480 CB LEU 560 -12.941 112.512 -29.834 1.00 0.00 C ATOM 4481 CG LEU 560 -13.805 111.399 -30.491 1.00 0.00 C ATOM 4482 CD1 LEU 560 -12.914 110.503 -31.366 1.00 0.00 C ATOM 4483 CD2 LEU 560 -14.522 110.490 -29.475 1.00 0.00 C ATOM 4484 N GLU 561 -12.065 115.452 -28.391 1.00 0.00 N ATOM 4485 CA GLU 561 -11.196 116.309 -27.521 1.00 0.00 C ATOM 4486 C GLU 561 -11.877 116.851 -26.203 1.00 0.00 C ATOM 4487 O GLU 561 -11.194 116.914 -25.177 1.00 0.00 O ATOM 4488 CB GLU 561 -10.325 117.305 -28.344 1.00 0.00 C ATOM 4489 CG GLU 561 -10.992 118.454 -29.144 1.00 0.00 C ATOM 4490 CD GLU 561 -10.079 119.193 -30.115 1.00 0.00 C ATOM 4491 OE1 GLU 561 -9.325 120.077 -29.664 1.00 0.00 O ATOM 4492 OE2 GLU 561 -10.107 118.928 -31.330 1.00 0.00 O ATOM 4493 N ASP 562 -13.190 117.178 -26.167 1.00 0.00 N ATOM 4494 CA ASP 562 -13.913 117.472 -24.885 1.00 0.00 C ATOM 4495 C ASP 562 -14.111 116.219 -23.944 1.00 0.00 C ATOM 4496 O ASP 562 -14.002 116.360 -22.719 1.00 0.00 O ATOM 4497 CB ASP 562 -15.183 118.306 -25.160 1.00 0.00 C ATOM 4498 CG ASP 562 -15.863 118.752 -23.870 1.00 0.00 C ATOM 4499 OD1 ASP 562 -17.002 118.316 -23.603 1.00 0.00 O ATOM 4500 OD2 ASP 562 -15.248 119.487 -23.071 1.00 0.00 O ATOM 4501 N LEU 563 -14.415 115.018 -24.472 1.00 0.00 N ATOM 4502 CA LEU 563 -14.370 113.755 -23.663 1.00 0.00 C ATOM 4503 C LEU 563 -12.947 113.451 -23.047 1.00 0.00 C ATOM 4504 O LEU 563 -12.856 112.983 -21.908 1.00 0.00 O ATOM 4505 CB LEU 563 -14.928 112.581 -24.518 1.00 0.00 C ATOM 4506 CG LEU 563 -16.463 112.564 -24.736 1.00 0.00 C ATOM 4507 CD1 LEU 563 -16.834 111.578 -25.853 1.00 0.00 C ATOM 4508 CD2 LEU 563 -17.221 112.182 -23.452 1.00 0.00 C ATOM 4509 N ASP 564 -11.858 113.752 -23.779 1.00 0.00 N ATOM 4510 CA ASP 564 -10.462 113.712 -23.259 1.00 0.00 C ATOM 4511 C ASP 564 -10.143 114.813 -22.168 1.00 0.00 C ATOM 4512 O ASP 564 -9.348 114.564 -21.258 1.00 0.00 O ATOM 4513 CB ASP 564 -9.497 113.823 -24.466 1.00 0.00 C ATOM 4514 CG ASP 564 -9.480 112.703 -25.499 1.00 0.00 C ATOM 4515 OD1 ASP 564 -8.794 112.886 -26.521 1.00 0.00 O ATOM 4516 OD2 ASP 564 -10.070 111.622 -25.311 1.00 0.00 O ATOM 4517 N TYR 565 -10.709 116.040 -22.256 1.00 0.00 N ATOM 4518 CA TYR 565 -10.559 117.104 -21.214 1.00 0.00 C ATOM 4519 C TYR 565 -11.169 116.730 -19.813 1.00 0.00 C ATOM 4520 O TYR 565 -10.492 116.933 -18.800 1.00 0.00 O ATOM 4521 CB TYR 565 -11.139 118.456 -21.734 1.00 0.00 C ATOM 4522 CG TYR 565 -10.252 119.337 -22.638 1.00 0.00 C ATOM 4523 CD1 TYR 565 -9.071 119.911 -22.145 1.00 0.00 C ATOM 4524 CD2 TYR 565 -10.696 119.704 -23.912 1.00 0.00 C ATOM 4525 CE1 TYR 565 -8.361 120.836 -22.912 1.00 0.00 C ATOM 4526 CE2 TYR 565 -9.985 120.617 -24.679 1.00 0.00 C ATOM 4527 CZ TYR 565 -8.830 121.198 -24.173 1.00 0.00 C ATOM 4528 OH TYR 565 -8.208 122.174 -24.902 1.00 0.00 H ATOM 4529 N ASP 566 -12.424 116.233 -19.716 1.00 0.00 N ATOM 4530 CA ASP 566 -13.006 115.793 -18.410 1.00 0.00 C ATOM 4531 C ASP 566 -12.271 114.572 -17.752 1.00 0.00 C ATOM 4532 O ASP 566 -12.030 114.636 -16.549 1.00 0.00 O ATOM 4533 CB ASP 566 -14.545 115.626 -18.527 1.00 0.00 C ATOM 4534 CG ASP 566 -15.300 115.480 -17.198 1.00 0.00 C ATOM 4535 OD1 ASP 566 -16.207 114.632 -17.121 1.00 0.00 O ATOM 4536 OD2 ASP 566 -15.047 116.254 -16.252 1.00 0.00 O ATOM 4537 N ILE 567 -11.864 113.508 -18.481 1.00 0.00 N ATOM 4538 CA ILE 567 -11.091 112.357 -17.886 1.00 0.00 C ATOM 4539 C ILE 567 -9.753 112.745 -17.162 1.00 0.00 C ATOM 4540 O ILE 567 -9.492 112.235 -16.071 1.00 0.00 O ATOM 4541 CB ILE 567 -10.929 111.130 -18.848 1.00 0.00 C ATOM 4542 CG1 ILE 567 -10.118 111.418 -20.142 1.00 0.00 C ATOM 4543 CG2 ILE 567 -12.304 110.500 -19.177 1.00 0.00 C ATOM 4544 CD1 ILE 567 -9.659 110.178 -20.933 1.00 0.00 C ATOM 4545 N HIS 568 -8.932 113.657 -17.719 1.00 0.00 N ATOM 4546 CA HIS 568 -7.733 114.201 -17.006 1.00 0.00 C ATOM 4547 C HIS 568 -8.086 115.101 -15.760 1.00 0.00 C ATOM 4548 O HIS 568 -7.343 115.083 -14.773 1.00 0.00 O ATOM 4549 CB HIS 568 -6.777 114.874 -18.027 1.00 0.00 C ATOM 4550 CG HIS 568 -6.004 113.894 -18.914 1.00 0.00 C ATOM 4551 ND1 HIS 568 -5.021 113.037 -18.431 1.00 0.00 N ATOM 4552 CD2 HIS 568 -6.183 113.714 -20.296 1.00 0.00 C ATOM 4553 CE1 HIS 568 -4.690 112.399 -19.602 1.00 0.00 C ATOM 4554 NE2 HIS 568 -5.337 112.725 -20.762 1.00 0.00 N ATOM 4555 N ALA 569 -9.181 115.890 -15.787 1.00 0.00 N ATOM 4556 CA ALA 569 -9.717 116.586 -14.580 1.00 0.00 C ATOM 4557 C ALA 569 -10.351 115.612 -13.513 1.00 0.00 C ATOM 4558 O ALA 569 -10.131 115.807 -12.317 1.00 0.00 O ATOM 4559 CB ALA 569 -10.680 117.674 -15.076 1.00 0.00 C ATOM 4560 N ILE 570 -11.112 114.566 -13.919 1.00 0.00 N ATOM 4561 CA ILE 570 -11.545 113.437 -13.021 1.00 0.00 C ATOM 4562 C ILE 570 -10.293 112.750 -12.356 1.00 0.00 C ATOM 4563 O ILE 570 -10.283 112.591 -11.136 1.00 0.00 O ATOM 4564 CB ILE 570 -12.476 112.411 -13.776 1.00 0.00 C ATOM 4565 CG1 ILE 570 -13.810 113.016 -14.306 1.00 0.00 C ATOM 4566 CG2 ILE 570 -12.840 111.170 -12.908 1.00 0.00 C ATOM 4567 CD1 ILE 570 -14.434 112.257 -15.490 1.00 0.00 C ATOM 4568 N MET 571 -9.242 112.379 -13.120 1.00 0.00 N ATOM 4569 CA MET 571 -7.950 111.880 -12.561 1.00 0.00 C ATOM 4570 C MET 571 -7.275 112.850 -11.526 1.00 0.00 C ATOM 4571 O MET 571 -6.778 112.360 -10.514 1.00 0.00 O ATOM 4572 CB MET 571 -7.003 111.494 -13.732 1.00 0.00 C ATOM 4573 CG MET 571 -7.402 110.206 -14.484 1.00 0.00 C ATOM 4574 SD MET 571 -6.465 110.075 -16.016 1.00 0.00 S ATOM 4575 CE MET 571 -7.253 108.607 -16.697 1.00 0.00 C ATOM 4576 N ASP 572 -7.263 114.185 -11.728 1.00 0.00 N ATOM 4577 CA ASP 572 -6.820 115.159 -10.682 1.00 0.00 C ATOM 4578 C ASP 572 -7.732 115.187 -9.394 1.00 0.00 C ATOM 4579 O ASP 572 -7.210 115.184 -8.276 1.00 0.00 O ATOM 4580 CB ASP 572 -6.613 116.534 -11.359 1.00 0.00 C ATOM 4581 CG ASP 572 -5.826 117.535 -10.524 1.00 0.00 C ATOM 4582 OD1 ASP 572 -6.189 118.726 -10.538 1.00 0.00 O ATOM 4583 OD2 ASP 572 -4.796 117.174 -9.923 1.00 0.00 O ATOM 4584 N ILE 573 -9.075 115.162 -9.532 1.00 0.00 N ATOM 4585 CA ILE 573 -10.034 114.987 -8.382 1.00 0.00 C ATOM 4586 C ILE 573 -9.782 113.620 -7.622 1.00 0.00 C ATOM 4587 O ILE 573 -9.709 113.605 -6.392 1.00 0.00 O ATOM 4588 CB ILE 573 -11.515 115.210 -8.875 1.00 0.00 C ATOM 4589 CG1 ILE 573 -11.780 116.649 -9.420 1.00 0.00 C ATOM 4590 CG2 ILE 573 -12.569 114.914 -7.773 1.00 0.00 C ATOM 4591 CD1 ILE 573 -12.996 116.779 -10.358 1.00 0.00 C ATOM 4592 N LEU 574 -9.629 112.484 -8.338 1.00 0.00 N ATOM 4593 CA LEU 574 -9.194 111.179 -7.747 1.00 0.00 C ATOM 4594 C LEU 574 -7.760 111.217 -7.089 1.00 0.00 C ATOM 4595 O LEU 574 -7.561 110.592 -6.044 1.00 0.00 O ATOM 4596 CB LEU 574 -9.307 110.057 -8.820 1.00 0.00 C ATOM 4597 CG LEU 574 -10.709 109.759 -9.420 1.00 0.00 C ATOM 4598 CD1 LEU 574 -10.575 108.789 -10.602 1.00 0.00 C ATOM 4599 CD2 LEU 574 -11.696 109.191 -8.389 1.00 0.00 C ATOM 4600 N ASN 575 -6.783 111.944 -7.674 1.00 0.00 N ATOM 4601 CA ASN 575 -5.449 112.215 -7.061 1.00 0.00 C ATOM 4602 C ASN 575 -5.541 113.036 -5.727 1.00 0.00 C ATOM 4603 O ASN 575 -4.900 112.618 -4.759 1.00 0.00 O ATOM 4604 CB ASN 575 -4.517 112.909 -8.095 1.00 0.00 C ATOM 4605 CG ASN 575 -3.641 111.988 -8.937 1.00 0.00 C ATOM 4606 OD1 ASN 575 -2.475 111.755 -8.640 1.00 0.00 O ATOM 4607 ND2 ASN 575 -4.139 111.447 -10.014 1.00 0.00 N ATOM 4608 N GLU 576 -6.289 114.164 -5.639 1.00 0.00 N ATOM 4609 CA GLU 576 -6.524 114.848 -4.328 1.00 0.00 C ATOM 4610 C GLU 576 -7.379 114.008 -3.305 1.00 0.00 C ATOM 4611 O GLU 576 -7.133 114.061 -2.102 1.00 0.00 O ATOM 4612 CB GLU 576 -6.903 116.348 -4.440 1.00 0.00 C ATOM 4613 CG GLU 576 -8.393 116.729 -4.652 1.00 0.00 C ATOM 4614 CD GLU 576 -8.701 118.153 -4.245 1.00 0.00 C ATOM 4615 OE1 GLU 576 -9.090 118.383 -3.081 1.00 0.00 O ATOM 4616 OE2 GLU 576 -8.551 119.061 -5.077 1.00 0.00 O ATOM 4617 N ARG 577 -8.367 113.209 -3.753 1.00 0.00 N ATOM 4618 CA ARG 577 -9.054 112.184 -2.900 1.00 0.00 C ATOM 4619 C ARG 577 -8.057 111.110 -2.301 1.00 0.00 C ATOM 4620 O ARG 577 -8.141 110.761 -1.118 1.00 0.00 O ATOM 4621 CB ARG 577 -10.214 111.647 -3.779 1.00 0.00 C ATOM 4622 CG ARG 577 -11.251 110.715 -3.110 1.00 0.00 C ATOM 4623 CD ARG 577 -12.321 110.307 -4.138 1.00 0.00 C ATOM 4624 NE ARG 577 -13.328 109.388 -3.540 1.00 0.00 N ATOM 4625 CZ ARG 577 -14.414 108.951 -4.150 1.00 0.00 C ATOM 4626 NH1 ARG 577 -14.770 109.300 -5.349 1.00 0.00 H ATOM 4627 NH2 ARG 577 -15.171 108.136 -3.504 1.00 0.00 H ATOM 4628 N ILE 578 -7.069 110.651 -3.099 1.00 0.00 N ATOM 4629 CA ILE 578 -5.893 109.862 -2.613 1.00 0.00 C ATOM 4630 C ILE 578 -5.022 110.694 -1.594 1.00 0.00 C ATOM 4631 O ILE 578 -4.691 110.142 -0.546 1.00 0.00 O ATOM 4632 CB ILE 578 -5.151 109.227 -3.849 1.00 0.00 C ATOM 4633 CG1 ILE 578 -5.861 107.922 -4.317 1.00 0.00 C ATOM 4634 CG2 ILE 578 -3.650 108.914 -3.627 1.00 0.00 C ATOM 4635 CD1 ILE 578 -5.679 107.587 -5.805 1.00 0.00 C ATOM 4636 N SER 579 -4.670 111.978 -1.842 1.00 0.00 N ATOM 4637 CA SER 579 -3.997 112.848 -0.825 1.00 0.00 C ATOM 4638 C SER 579 -4.813 113.082 0.503 1.00 0.00 C ATOM 4639 O SER 579 -4.237 113.009 1.589 1.00 0.00 O ATOM 4640 CB SER 579 -3.433 114.132 -1.468 1.00 0.00 C ATOM 4641 OG SER 579 -4.454 115.068 -1.797 1.00 0.00 O ATOM 4642 N ASN 580 -6.144 113.289 0.437 1.00 0.00 N ATOM 4643 CA ASN 580 -7.045 113.324 1.635 1.00 0.00 C ATOM 4644 C ASN 580 -7.044 112.003 2.498 1.00 0.00 C ATOM 4645 O ASN 580 -7.184 112.075 3.721 1.00 0.00 O ATOM 4646 CB ASN 580 -8.486 113.693 1.182 1.00 0.00 C ATOM 4647 CG ASN 580 -8.733 115.176 0.904 1.00 0.00 C ATOM 4648 OD1 ASN 580 -8.969 115.974 1.807 1.00 0.00 O ATOM 4649 ND2 ASN 580 -8.721 115.595 -0.333 1.00 0.00 N ATOM 4650 N SER 581 -6.935 110.809 1.887 1.00 0.00 N ATOM 4651 CA SER 581 -6.707 109.524 2.615 1.00 0.00 C ATOM 4652 C SER 581 -5.225 109.405 3.142 1.00 0.00 C ATOM 4653 O SER 581 -5.023 109.335 4.353 1.00 0.00 O ATOM 4654 CB SER 581 -7.238 108.349 1.753 1.00 0.00 C ATOM 4655 OG SER 581 -6.702 108.313 0.425 1.00 0.00 O ATOM 4656 N LYS 582 -4.215 109.459 2.251 1.00 0.00 N ATOM 4657 CA LYS 582 -2.744 109.533 2.572 1.00 0.00 C ATOM 4658 C LYS 582 -2.322 110.462 3.777 1.00 0.00 C ATOM 4659 O LYS 582 -1.702 109.990 4.733 1.00 0.00 O ATOM 4660 CB LYS 582 -2.151 109.994 1.202 1.00 0.00 C ATOM 4661 CG LYS 582 -0.640 110.289 1.004 1.00 0.00 C ATOM 4662 CD LYS 582 -0.463 111.243 -0.208 1.00 0.00 C ATOM 4663 CE LYS 582 0.977 111.438 -0.710 1.00 0.00 C ATOM 4664 NZ LYS 582 1.075 112.736 -1.420 1.00 0.00 N ATOM 4665 N LEU 583 -2.682 111.762 3.741 1.00 0.00 N ATOM 4666 CA LEU 583 -2.425 112.725 4.858 1.00 0.00 C ATOM 4667 C LEU 583 -3.198 112.402 6.187 1.00 0.00 C ATOM 4668 O LEU 583 -2.635 112.571 7.272 1.00 0.00 O ATOM 4669 CB LEU 583 -2.749 114.166 4.371 1.00 0.00 C ATOM 4670 CG LEU 583 -1.890 114.770 3.229 1.00 0.00 C ATOM 4671 CD1 LEU 583 -2.553 116.046 2.687 1.00 0.00 C ATOM 4672 CD2 LEU 583 -0.463 115.104 3.693 1.00 0.00 C ATOM 4673 N VAL 584 -4.471 111.954 6.123 1.00 0.00 N ATOM 4674 CA VAL 584 -5.221 111.457 7.324 1.00 0.00 C ATOM 4675 C VAL 584 -4.573 110.156 7.931 1.00 0.00 C ATOM 4676 O VAL 584 -4.521 110.068 9.156 1.00 0.00 O ATOM 4677 CB VAL 584 -6.763 111.372 7.047 1.00 0.00 C ATOM 4678 CG1 VAL 584 -7.597 110.751 8.195 1.00 0.00 C ATOM 4679 CG2 VAL 584 -7.395 112.760 6.787 1.00 0.00 C ATOM 4680 N ASN 585 -4.057 109.188 7.141 1.00 0.00 N ATOM 4681 CA ASN 585 -3.282 108.018 7.667 1.00 0.00 C ATOM 4682 C ASN 585 -1.984 108.420 8.468 1.00 0.00 C ATOM 4683 O ASN 585 -1.764 107.890 9.561 1.00 0.00 O ATOM 4684 CB ASN 585 -2.955 107.022 6.517 1.00 0.00 C ATOM 4685 CG ASN 585 -4.123 106.391 5.752 1.00 0.00 C ATOM 4686 OD1 ASN 585 -4.282 106.576 4.553 1.00 0.00 O ATOM 4687 ND2 ASN 585 -4.951 105.591 6.370 1.00 0.00 N ATOM 4688 N ASP 586 -1.147 109.358 7.967 1.00 0.00 N ATOM 4689 CA ASP 586 0.017 109.903 8.736 1.00 0.00 C ATOM 4690 C ASP 586 -0.406 110.771 9.988 1.00 0.00 C ATOM 4691 O ASP 586 0.148 110.584 11.075 1.00 0.00 O ATOM 4692 CB ASP 586 0.964 110.622 7.742 1.00 0.00 C ATOM 4693 CG ASP 586 2.404 110.681 8.229 1.00 0.00 C ATOM 4694 OD1 ASP 586 2.730 111.504 9.108 1.00 0.00 O ATOM 4695 OD2 ASP 586 3.241 109.908 7.725 1.00 0.00 O ATOM 4696 N LYS 587 -1.406 111.678 9.868 1.00 0.00 N ATOM 4697 CA LYS 587 -2.026 112.393 11.033 1.00 0.00 C ATOM 4698 C LYS 587 -2.631 111.415 12.123 1.00 0.00 C ATOM 4699 O LYS 587 -2.468 111.648 13.321 1.00 0.00 O ATOM 4700 CB LYS 587 -3.054 113.407 10.448 1.00 0.00 C ATOM 4701 CG LYS 587 -3.630 114.453 11.437 1.00 0.00 C ATOM 4702 CD LYS 587 -4.746 115.314 10.799 1.00 0.00 C ATOM 4703 CE LYS 587 -5.277 116.435 11.723 1.00 0.00 C ATOM 4704 NZ LYS 587 -6.358 117.154 11.002 1.00 0.00 N ATOM 4705 N GLN 588 -3.302 110.321 11.704 1.00 0.00 N ATOM 4706 CA GLN 588 -3.743 109.194 12.579 1.00 0.00 C ATOM 4707 C GLN 588 -2.545 108.486 13.307 1.00 0.00 C ATOM 4708 O GLN 588 -2.601 108.348 14.532 1.00 0.00 O ATOM 4709 CB GLN 588 -4.587 108.267 11.661 1.00 0.00 C ATOM 4710 CG GLN 588 -5.174 106.973 12.279 1.00 0.00 C ATOM 4711 CD GLN 588 -6.017 106.185 11.274 1.00 0.00 C ATOM 4712 OE1 GLN 588 -7.161 106.521 10.989 1.00 0.00 O ATOM 4713 NE2 GLN 588 -5.497 105.150 10.675 1.00 0.00 N ATOM 4714 N LYS 589 -1.466 108.072 12.600 1.00 0.00 N ATOM 4715 CA LYS 589 -0.211 107.586 13.252 1.00 0.00 C ATOM 4716 C LYS 589 0.402 108.623 14.263 1.00 0.00 C ATOM 4717 O LYS 589 0.719 108.238 15.391 1.00 0.00 O ATOM 4718 CB LYS 589 0.810 107.124 12.173 1.00 0.00 C ATOM 4719 CG LYS 589 2.060 106.418 12.767 1.00 0.00 C ATOM 4720 CD LYS 589 3.113 106.030 11.714 1.00 0.00 C ATOM 4721 CE LYS 589 4.350 105.368 12.359 1.00 0.00 C ATOM 4722 NZ LYS 589 5.288 104.962 11.284 1.00 0.00 N ATOM 4723 N LYS 590 0.541 109.914 13.890 1.00 0.00 N ATOM 4724 CA LYS 590 0.983 110.984 14.823 1.00 0.00 C ATOM 4725 C LYS 590 0.067 111.161 16.092 1.00 0.00 C ATOM 4726 O LYS 590 0.599 111.225 17.200 1.00 0.00 O ATOM 4727 CB LYS 590 1.189 112.298 14.022 1.00 0.00 C ATOM 4728 CG LYS 590 2.023 113.316 14.828 1.00 0.00 C ATOM 4729 CD LYS 590 2.215 114.686 14.165 1.00 0.00 C ATOM 4730 CE LYS 590 3.074 115.566 15.087 1.00 0.00 C ATOM 4731 NZ LYS 590 3.268 116.907 14.484 1.00 0.00 N ATOM 4732 N HIS 591 -1.273 111.219 15.956 1.00 0.00 N ATOM 4733 CA HIS 591 -2.211 111.235 17.122 1.00 0.00 C ATOM 4734 C HIS 591 -2.103 109.977 18.051 1.00 0.00 C ATOM 4735 O HIS 591 -2.012 110.134 19.271 1.00 0.00 O ATOM 4736 CB HIS 591 -3.665 111.438 16.624 1.00 0.00 C ATOM 4737 CG HIS 591 -4.048 112.852 16.219 1.00 0.00 C ATOM 4738 ND1 HIS 591 -4.057 113.904 17.120 1.00 0.00 N ATOM 4739 CD2 HIS 591 -4.743 113.190 15.051 1.00 0.00 C ATOM 4740 CE1 HIS 591 -4.793 114.801 16.399 1.00 0.00 C ATOM 4741 NE2 HIS 591 -5.210 114.489 15.133 1.00 0.00 N ATOM 4742 N ILE 592 -2.090 108.750 17.485 1.00 0.00 N ATOM 4743 CA ILE 592 -1.815 107.481 18.243 1.00 0.00 C ATOM 4744 C ILE 592 -0.428 107.544 18.993 1.00 0.00 C ATOM 4745 O ILE 592 -0.373 107.265 20.191 1.00 0.00 O ATOM 4746 CB ILE 592 -2.011 106.243 17.291 1.00 0.00 C ATOM 4747 CG1 ILE 592 -3.470 106.104 16.753 1.00 0.00 C ATOM 4748 CG2 ILE 592 -1.619 104.901 17.966 1.00 0.00 C ATOM 4749 CD1 ILE 592 -3.614 105.273 15.468 1.00 0.00 C ATOM 4750 N LEU 593 0.669 107.955 18.328 1.00 0.00 N ATOM 4751 CA LEU 593 1.977 108.224 18.995 1.00 0.00 C ATOM 4752 C LEU 593 1.937 109.336 20.099 1.00 0.00 C ATOM 4753 O LEU 593 2.530 109.138 21.154 1.00 0.00 O ATOM 4754 CB LEU 593 3.030 108.547 17.905 1.00 0.00 C ATOM 4755 CG LEU 593 3.512 107.343 17.063 1.00 0.00 C ATOM 4756 CD1 LEU 593 4.273 107.852 15.839 1.00 0.00 C ATOM 4757 CD2 LEU 593 4.430 106.412 17.871 1.00 0.00 C ATOM 4758 N GLY 594 1.244 110.475 19.892 1.00 0.00 N ATOM 4759 CA GLY 594 1.048 111.521 20.943 1.00 0.00 C ATOM 4760 C GLY 594 0.428 111.043 22.285 1.00 0.00 C ATOM 4761 O GLY 594 0.973 111.349 23.349 1.00 0.00 O ATOM 4762 N GLU 595 -0.694 110.305 22.231 1.00 0.00 N ATOM 4763 CA GLU 595 -1.262 109.604 23.426 1.00 0.00 C ATOM 4764 C GLU 595 -0.312 108.494 24.013 1.00 0.00 C ATOM 4765 O GLU 595 -0.116 108.450 25.231 1.00 0.00 O ATOM 4766 CB GLU 595 -2.729 109.161 23.153 1.00 0.00 C ATOM 4767 CG GLU 595 -3.027 108.218 21.950 1.00 0.00 C ATOM 4768 CD GLU 595 -4.407 108.351 21.343 1.00 0.00 C ATOM 4769 OE1 GLU 595 -4.678 109.374 20.679 1.00 0.00 O ATOM 4770 OE2 GLU 595 -5.258 107.459 21.519 1.00 0.00 O ATOM 4771 N LEU 596 0.325 107.641 23.182 1.00 0.00 N ATOM 4772 CA LEU 596 1.389 106.690 23.637 1.00 0.00 C ATOM 4773 C LEU 596 2.641 107.364 24.315 1.00 0.00 C ATOM 4774 O LEU 596 3.194 106.804 25.260 1.00 0.00 O ATOM 4775 CB LEU 596 1.821 105.787 22.446 1.00 0.00 C ATOM 4776 CG LEU 596 0.784 104.776 21.897 1.00 0.00 C ATOM 4777 CD1 LEU 596 1.314 104.110 20.615 1.00 0.00 C ATOM 4778 CD2 LEU 596 0.451 103.692 22.927 1.00 0.00 C ATOM 4779 N TYR 597 3.111 108.535 23.855 1.00 0.00 N ATOM 4780 CA TYR 597 4.182 109.329 24.531 1.00 0.00 C ATOM 4781 C TYR 597 3.812 109.875 25.961 1.00 0.00 C ATOM 4782 O TYR 597 4.691 109.954 26.825 1.00 0.00 O ATOM 4783 CB TYR 597 4.549 110.534 23.612 1.00 0.00 C ATOM 4784 CG TYR 597 5.197 110.324 22.225 1.00 0.00 C ATOM 4785 CD1 TYR 597 5.893 109.164 21.858 1.00 0.00 C ATOM 4786 CD2 TYR 597 5.057 111.356 21.291 1.00 0.00 C ATOM 4787 CE1 TYR 597 6.395 109.025 20.564 1.00 0.00 C ATOM 4788 CE2 TYR 597 5.558 111.214 20.002 1.00 0.00 C ATOM 4789 CZ TYR 597 6.216 110.045 19.635 1.00 0.00 C ATOM 4790 OH TYR 597 6.637 109.889 18.340 1.00 0.00 H ATOM 4791 N LEU 598 2.548 110.285 26.187 0.10 0.00 N ATOM 4792 CA LEU 598 2.078 110.844 27.480 0.10 0.00 C ATOM 4793 C LEU 598 1.044 109.878 28.159 0.10 0.00 C ATOM 4794 O LEU 598 -0.175 110.053 28.020 0.10 0.00 O ATOM 4795 CB LEU 598 1.489 112.273 27.241 0.10 0.00 C ATOM 4796 CG LEU 598 2.303 113.342 26.457 0.10 0.00 C ATOM 4797 CD1 LEU 598 1.558 114.687 26.480 0.10 0.00 C ATOM 4798 CD2 LEU 598 3.738 113.553 26.958 0.10 0.00 C ATOM 4799 N PHE 599 1.516 108.869 28.918 0.10 0.00 N ATOM 4800 CA PHE 599 0.615 107.927 29.653 0.10 0.00 C ATOM 4801 C PHE 599 0.090 108.567 30.982 0.10 0.00 C ATOM 4802 O PHE 599 0.674 108.405 32.058 0.10 0.00 O ATOM 4803 CB PHE 599 1.336 106.562 29.885 0.10 0.00 C ATOM 4804 CG PHE 599 1.132 105.527 28.770 0.10 0.00 C ATOM 4805 CD1 PHE 599 2.115 105.313 27.802 0.10 0.00 C ATOM 4806 CD2 PHE 599 -0.053 104.784 28.721 0.10 0.00 C ATOM 4807 CE1 PHE 599 1.908 104.383 26.784 0.10 0.00 C ATOM 4808 CE2 PHE 599 -0.262 103.862 27.699 0.10 0.00 C ATOM 4809 CZ PHE 599 0.717 103.666 26.728 0.10 0.00 C ATOM 4810 N LEU 600 -1.032 109.298 30.897 0.10 0.00 N ATOM 4811 CA LEU 600 -1.637 109.990 32.069 0.10 0.00 C ATOM 4812 C LEU 600 -2.630 109.047 32.835 0.10 0.00 C ATOM 4813 O LEU 600 -3.854 109.204 32.785 0.10 0.00 O ATOM 4814 CB LEU 600 -2.259 111.326 31.554 0.10 0.00 C ATOM 4815 CG LEU 600 -1.321 112.378 30.894 0.10 0.00 C ATOM 4816 CD1 LEU 600 -2.130 113.586 30.398 0.10 0.00 C ATOM 4817 CD2 LEU 600 -0.234 112.876 31.856 0.10 0.00 C ATOM 4818 N ASN 601 -2.082 108.065 33.572 0.10 0.00 N ATOM 4819 CA ASN 601 -2.886 107.043 34.299 0.10 0.00 C ATOM 4820 C ASN 601 -3.370 107.505 35.709 0.10 0.00 C ATOM 4821 O ASN 601 -2.664 108.192 36.454 0.10 0.00 O ATOM 4822 CB ASN 601 -2.048 105.736 34.404 0.10 0.00 C ATOM 4823 CG ASN 601 -1.954 104.927 33.110 0.10 0.00 C ATOM 4824 OD1 ASN 601 -1.012 105.040 32.333 0.10 0.00 O ATOM 4825 ND2 ASN 601 -2.912 104.080 32.844 0.10 0.00 N ATOM 4826 N ASP 602 -4.592 107.103 36.076 0.10 0.00 N ATOM 4827 CA ASP 602 -5.185 107.393 37.406 0.10 0.00 C ATOM 4828 C ASP 602 -6.227 106.282 37.777 0.10 0.00 C ATOM 4829 O ASP 602 -6.951 105.765 36.919 0.10 0.00 O ATOM 4830 CB ASP 602 -5.803 108.821 37.405 0.10 0.00 C ATOM 4831 CG ASP 602 -5.754 109.501 38.763 0.10 0.00 C ATOM 4832 OD1 ASP 602 -6.458 109.065 39.694 0.10 0.00 O ATOM 4833 OD2 ASP 602 -5.013 110.490 38.917 0.10 0.00 O ATOM 4834 N ASN 603 -6.287 105.885 39.053 0.10 0.00 N ATOM 4835 CA ASN 603 -7.286 104.895 39.544 0.10 0.00 C ATOM 4836 C ASN 603 -7.867 105.398 40.899 0.10 0.00 C ATOM 4837 O ASN 603 -7.254 105.228 41.959 0.10 0.00 O ATOM 4838 CB ASN 603 -6.673 103.473 39.664 0.10 0.00 C ATOM 4839 CG ASN 603 -6.394 102.762 38.342 0.10 0.00 C ATOM 4840 OD1 ASN 603 -5.286 102.786 37.821 0.10 0.00 O ATOM 4841 ND2 ASN 603 -7.350 102.073 37.777 0.10 0.00 N ATOM 4842 N GLY 604 -9.050 106.030 40.861 0.10 0.00 N ATOM 4843 CA GLY 604 -9.742 106.497 42.090 0.10 0.00 C ATOM 4844 C GLY 604 -10.483 105.369 42.839 0.10 0.00 C ATOM 4845 O GLY 604 -11.259 104.620 42.237 0.10 0.00 O ATOM 4846 N TYR 605 -10.221 105.251 44.144 0.10 0.00 N ATOM 4847 CA TYR 605 -10.859 104.216 45.010 0.10 0.00 C ATOM 4848 C TYR 605 -11.721 104.938 46.091 0.10 0.00 C ATOM 4849 O TYR 605 -11.250 105.244 47.192 0.10 0.00 O ATOM 4850 CB TYR 605 -9.774 103.266 45.595 0.10 0.00 C ATOM 4851 CG TYR 605 -9.088 102.343 44.573 0.10 0.00 C ATOM 4852 CD1 TYR 605 -9.694 101.147 44.173 0.10 0.00 C ATOM 4853 CD2 TYR 605 -7.871 102.718 44.000 0.10 0.00 C ATOM 4854 CE1 TYR 605 -9.089 100.342 43.210 0.10 0.00 C ATOM 4855 CE2 TYR 605 -7.272 101.919 43.029 0.10 0.00 C ATOM 4856 CZ TYR 605 -7.882 100.732 42.636 0.10 0.00 C ATOM 4857 OH TYR 605 -7.289 99.947 41.688 0.10 0.00 H ATOM 4858 N LEU 606 -12.986 105.232 45.760 0.10 0.00 N ATOM 4859 CA LEU 606 -13.903 105.998 46.646 0.10 0.00 C ATOM 4860 C LEU 606 -14.881 105.052 47.413 0.10 0.00 C ATOM 4861 O LEU 606 -15.956 104.677 46.930 0.10 0.00 O ATOM 4862 CB LEU 606 -14.610 107.099 45.803 0.10 0.00 C ATOM 4863 CG LEU 606 -13.725 108.112 45.022 0.10 0.00 C ATOM 4864 CD1 LEU 606 -14.615 109.166 44.355 0.10 0.00 C ATOM 4865 CD2 LEU 606 -12.678 108.814 45.900 0.10 0.00 C ATOM 4866 N LYS 607 -14.480 104.679 48.635 0.10 0.00 N ATOM 4867 CA LYS 607 -15.255 103.781 49.525 0.10 0.00 C ATOM 4868 C LYS 607 -15.935 104.592 50.683 0.10 0.00 C ATOM 4869 O LYS 607 -15.306 104.914 51.697 0.10 0.00 O ATOM 4870 CB LYS 607 -14.239 102.714 50.014 0.10 0.00 C ATOM 4871 CG LYS 607 -14.854 101.516 50.765 0.10 0.00 C ATOM 4872 CD LYS 607 -13.773 100.642 51.432 0.10 0.00 C ATOM 4873 CE LYS 607 -14.385 99.388 52.078 0.10 0.00 C ATOM 4874 NZ LYS 607 -13.386 98.762 52.983 0.10 0.00 N ATOM 4875 N SER 608 -17.227 104.923 50.528 0.10 0.00 N ATOM 4876 CA SER 608 -18.020 105.640 51.571 0.10 0.00 C ATOM 4877 C SER 608 -18.595 104.610 52.596 0.10 0.00 C ATOM 4878 O SER 608 -19.466 103.796 52.268 0.10 0.00 O ATOM 4879 CB SER 608 -19.111 106.504 50.894 0.10 0.00 C ATOM 4880 OG SER 608 -19.990 105.747 50.050 0.10 0.00 O ATOM 4881 N ILE 609 -18.077 104.616 53.830 0.10 0.00 N ATOM 4882 CA ILE 609 -18.414 103.584 54.863 0.10 0.00 C ATOM 4883 C ILE 609 -19.577 104.087 55.785 0.10 0.00 C ATOM 4884 O ILE 609 -19.353 104.684 56.842 0.10 0.00 O ATOM 4885 CB ILE 609 -17.088 103.159 55.597 0.10 0.00 C ATOM 4886 CG1 ILE 609 -15.973 102.610 54.645 0.10 0.00 C ATOM 4887 CG2 ILE 609 -17.315 102.100 56.706 0.10 0.00 C ATOM 4888 CD1 ILE 609 -14.560 103.058 55.043 0.10 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 59.00 64.5 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 30.29 90.0 70 100.0 70 ARMSMC SURFACE . . . . . . . . 61.19 61.1 90 100.0 90 ARMSMC BURIED . . . . . . . . 47.89 80.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.24 41.5 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 78.42 42.3 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 81.92 33.3 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 81.76 39.5 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 67.35 50.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.93 38.3 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 68.17 36.7 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 79.43 35.5 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 81.46 34.2 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 73.13 55.6 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.72 33.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 78.43 40.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 61.66 44.4 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 72.94 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 77.49 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.43 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 93.43 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 58.44 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 102.31 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 6.05 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 21.99 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 21.99 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.3927 CRMSCA SECONDARY STRUCTURE . . 18.11 35 100.0 35 CRMSCA SURFACE . . . . . . . . 22.06 46 100.0 46 CRMSCA BURIED . . . . . . . . 21.70 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 21.91 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 18.16 174 100.0 174 CRMSMC SURFACE . . . . . . . . 21.99 228 100.0 228 CRMSMC BURIED . . . . . . . . 21.54 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 22.56 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 22.61 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 19.23 151 100.0 151 CRMSSC SURFACE . . . . . . . . 22.81 196 100.0 196 CRMSSC BURIED . . . . . . . . 21.21 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 22.21 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 18.64 291 100.0 291 CRMSALL SURFACE . . . . . . . . 22.40 380 100.0 380 CRMSALL BURIED . . . . . . . . 21.29 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 19.361 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 15.870 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 19.496 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 18.738 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 19.307 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 15.936 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 19.449 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 18.658 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 20.172 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 20.159 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 17.149 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 20.429 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 18.878 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 19.716 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 16.505 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 19.930 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 18.688 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 12 56 56 DISTCA CA (P) 0.00 0.00 0.00 0.00 21.43 56 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.64 DISTCA ALL (N) 0 0 0 0 80 459 459 DISTALL ALL (P) 0.00 0.00 0.00 0.00 17.43 459 DISTALL ALL (RMS) 0.00 0.00 0.00 0.00 8.60 DISTALL END of the results output