####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS253_1_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS253_1_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 47 559 - 605 4.90 7.55 LONGEST_CONTINUOUS_SEGMENT: 47 560 - 606 4.77 7.54 LONGEST_CONTINUOUS_SEGMENT: 47 561 - 607 4.97 7.53 LCS_AVERAGE: 81.38 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 566 - 597 1.96 8.57 LCS_AVERAGE: 42.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 566 - 581 0.91 10.37 LCS_AVERAGE: 19.80 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 3 14 28 0 3 8 9 13 16 18 18 19 20 21 24 26 29 29 32 36 38 40 43 LCS_GDT S 555 S 555 11 14 28 9 10 11 12 14 16 18 18 19 21 23 24 27 29 31 33 37 40 42 44 LCS_GDT I 556 I 556 11 14 45 9 10 11 12 14 16 18 18 19 21 27 27 28 35 36 40 43 46 47 50 LCS_GDT L 557 L 557 11 14 45 9 10 11 12 14 16 18 18 19 27 36 38 40 42 43 45 46 47 48 50 LCS_GDT D 558 D 558 11 14 45 9 10 11 12 14 16 18 18 19 21 27 27 31 35 39 42 43 46 47 50 LCS_GDT T 559 T 559 11 14 47 9 10 11 12 14 16 18 18 19 21 27 27 28 35 36 40 43 47 48 50 LCS_GDT L 560 L 560 11 14 47 9 10 11 12 14 16 18 18 20 31 36 38 40 42 43 45 46 47 48 50 LCS_GDT E 561 E 561 11 14 47 9 10 11 12 14 16 18 18 20 28 36 38 40 42 43 45 46 47 48 50 LCS_GDT D 562 D 562 11 14 47 9 10 11 12 14 16 18 18 19 24 27 32 33 40 43 45 46 47 48 50 LCS_GDT L 563 L 563 11 14 47 9 10 11 12 14 16 18 18 19 28 36 38 40 42 43 45 46 47 48 50 LCS_GDT D 564 D 564 11 16 47 4 10 11 12 14 16 18 19 30 35 36 38 40 42 43 45 46 47 48 50 LCS_GDT Y 565 Y 565 11 23 47 4 8 11 12 17 30 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT D 566 D 566 16 32 47 9 13 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 49 LCS_GDT I 567 I 567 16 32 47 9 13 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT H 568 H 568 16 32 47 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT A 569 A 569 16 32 47 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT I 570 I 570 16 32 47 9 13 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT M 571 M 571 16 32 47 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT D 572 D 572 16 32 47 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT I 573 I 573 16 32 47 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 574 L 574 16 32 47 9 13 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT N 575 N 575 16 32 47 4 13 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT E 576 E 576 16 32 47 4 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT R 577 R 577 16 32 47 6 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT I 578 I 578 16 32 47 4 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT S 579 S 579 16 32 47 4 12 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT N 580 N 580 16 32 47 4 12 17 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT S 581 S 581 16 32 47 4 11 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT K 582 K 582 15 32 47 6 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 583 L 583 15 32 47 5 12 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 49 LCS_GDT V 584 V 584 11 32 47 7 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT N 585 N 585 11 32 47 6 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT D 586 D 586 11 32 47 6 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT K 587 K 587 11 32 47 5 10 15 19 26 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT Q 588 Q 588 11 32 47 5 10 16 19 27 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT K 589 K 589 11 32 47 8 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT K 590 K 590 11 32 47 8 10 16 19 27 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT H 591 H 591 10 32 47 8 10 16 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT I 592 I 592 10 32 47 8 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 593 L 593 10 32 47 8 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT G 594 G 594 10 32 47 8 10 16 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT E 595 E 595 10 32 47 8 10 14 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 596 L 596 10 32 47 8 10 13 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT Y 597 Y 597 10 32 47 5 10 12 19 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 598 L 598 3 28 47 3 9 14 18 22 26 30 33 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT F 599 F 599 3 26 47 3 3 12 19 22 25 30 32 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 600 L 600 3 4 47 3 3 4 4 5 20 24 32 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT N 601 N 601 3 4 47 3 3 4 4 5 9 21 24 30 33 37 39 40 42 43 45 46 47 48 50 LCS_GDT D 602 D 602 7 8 47 0 6 7 7 8 8 8 11 12 25 27 28 35 38 39 41 43 46 47 50 LCS_GDT N 603 N 603 7 8 47 3 6 7 7 8 8 24 26 31 34 37 39 40 41 43 45 46 47 48 50 LCS_GDT G 604 G 604 7 8 47 5 10 15 19 22 26 30 32 34 37 38 39 40 42 43 45 46 47 48 50 LCS_GDT Y 605 Y 605 7 8 47 5 6 7 14 21 23 30 31 33 36 38 39 40 42 43 45 46 47 48 50 LCS_GDT L 606 L 606 7 8 47 5 6 7 7 8 8 8 11 12 27 32 36 39 40 42 45 46 47 48 50 LCS_GDT K 607 K 607 7 8 47 5 6 7 7 8 8 8 11 12 14 19 22 31 35 37 40 43 44 46 50 LCS_GDT S 608 S 608 7 8 46 5 6 7 7 8 8 8 8 8 9 13 14 19 20 21 36 38 40 43 47 LCS_GDT I 609 I 609 3 8 12 1 4 4 7 8 8 8 8 8 8 8 10 13 14 17 20 20 28 33 36 LCS_AVERAGE LCS_A: 47.85 ( 19.80 42.38 81.38 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 17 20 28 31 33 33 34 37 38 39 40 42 43 45 46 47 48 50 GDT PERCENT_AT 16.07 23.21 30.36 35.71 50.00 55.36 58.93 58.93 60.71 66.07 67.86 69.64 71.43 75.00 76.79 80.36 82.14 83.93 85.71 89.29 GDT RMS_LOCAL 0.28 0.59 0.94 1.49 1.80 1.91 2.05 2.05 2.22 2.70 2.83 3.07 3.25 3.72 3.85 4.26 4.43 4.69 4.97 5.80 GDT RMS_ALL_AT 15.95 10.07 10.48 8.45 8.64 8.61 8.48 8.48 8.31 8.03 8.02 7.97 7.95 7.71 7.71 7.63 7.59 7.52 7.48 7.34 # Checking swapping # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 572 D 572 # possible swapping detected: E 576 E 576 # possible swapping detected: E 595 E 595 # possible swapping detected: Y 597 Y 597 # possible swapping detected: Y 605 Y 605 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 19.805 0 0.637 0.961 21.382 0.000 0.000 LGA S 555 S 555 19.055 0 0.622 0.735 21.058 0.000 0.000 LGA I 556 I 556 14.194 0 0.055 1.259 15.682 0.000 0.000 LGA L 557 L 557 10.568 0 0.032 0.423 11.854 0.000 2.321 LGA D 558 D 558 15.356 0 0.010 0.080 19.564 0.000 0.000 LGA T 559 T 559 15.578 0 0.058 0.067 18.349 0.000 0.000 LGA L 560 L 560 9.511 0 0.032 0.136 11.590 1.667 3.929 LGA E 561 E 561 10.838 0 0.011 0.815 16.840 0.000 0.000 LGA D 562 D 562 14.650 0 0.082 1.080 20.128 0.000 0.000 LGA L 563 L 563 10.894 0 0.034 0.178 14.193 2.500 1.250 LGA D 564 D 564 7.780 0 0.096 0.868 11.225 15.714 8.750 LGA Y 565 Y 565 3.835 0 0.092 0.935 8.156 37.976 23.849 LGA D 566 D 566 2.736 0 0.251 1.021 4.736 60.952 50.714 LGA I 567 I 567 2.456 0 0.040 0.123 2.864 64.881 61.964 LGA H 568 H 568 1.653 0 0.014 1.285 6.449 75.000 54.333 LGA A 569 A 569 1.801 0 0.044 0.048 1.954 72.857 72.857 LGA I 570 I 570 2.342 0 0.052 0.090 3.398 64.762 59.167 LGA M 571 M 571 1.928 0 0.043 1.111 5.906 72.857 62.560 LGA D 572 D 572 0.952 0 0.067 0.065 1.297 85.952 89.405 LGA I 573 I 573 1.223 0 0.033 1.254 3.119 81.429 73.274 LGA L 574 L 574 2.304 0 0.036 0.114 3.680 66.786 58.452 LGA N 575 N 575 2.433 0 0.085 1.021 5.630 64.762 54.762 LGA E 576 E 576 1.596 0 0.012 1.143 5.314 75.000 60.794 LGA R 577 R 577 0.892 0 0.033 1.238 5.866 83.690 66.190 LGA I 578 I 578 1.622 0 0.045 0.124 2.667 75.000 68.929 LGA S 579 S 579 2.767 0 0.032 0.030 3.690 57.262 53.730 LGA N 580 N 580 2.537 0 0.250 0.242 3.769 64.881 57.500 LGA S 581 S 581 1.821 0 0.264 0.299 2.357 70.952 68.889 LGA K 582 K 582 1.214 0 0.140 0.912 4.560 75.476 57.354 LGA L 583 L 583 0.874 0 0.030 0.122 2.167 90.476 80.714 LGA V 584 V 584 1.136 0 0.057 1.047 2.840 85.952 78.095 LGA N 585 N 585 1.632 0 0.026 1.242 2.369 75.000 75.179 LGA D 586 D 586 1.708 0 0.095 0.808 2.104 68.810 74.107 LGA K 587 K 587 3.144 0 0.000 1.653 3.506 51.786 57.725 LGA Q 588 Q 588 2.571 0 0.026 0.290 2.825 57.143 62.381 LGA K 589 K 589 2.122 0 0.104 0.879 2.261 64.762 70.317 LGA K 590 K 590 2.630 0 0.080 0.896 3.002 62.857 59.735 LGA H 591 H 591 2.212 0 0.055 0.113 3.195 68.810 61.857 LGA I 592 I 592 1.204 0 0.019 0.153 1.577 81.429 80.357 LGA L 593 L 593 1.805 0 0.085 1.310 5.294 72.857 64.048 LGA G 594 G 594 1.894 0 0.050 0.050 1.894 77.143 77.143 LGA E 595 E 595 1.310 0 0.104 1.152 6.552 85.952 61.958 LGA L 596 L 596 1.193 0 0.522 0.459 3.224 88.214 73.750 LGA Y 597 Y 597 2.112 0 0.308 1.174 13.683 60.952 28.294 LGA L 598 L 598 5.742 0 0.601 1.304 7.400 23.333 20.000 LGA F 599 F 599 6.830 0 0.632 1.148 11.658 17.262 7.143 LGA L 600 L 600 7.267 0 0.553 1.335 9.495 7.738 5.893 LGA N 601 N 601 10.637 0 0.658 0.733 13.576 0.357 0.357 LGA D 602 D 602 14.908 0 0.679 1.265 19.359 0.000 0.000 LGA N 603 N 603 12.015 0 0.670 1.056 15.397 0.000 0.000 LGA G 604 G 604 8.007 0 0.077 0.077 9.272 8.333 8.333 LGA Y 605 Y 605 8.148 0 0.060 1.348 9.862 3.214 8.532 LGA L 606 L 606 9.689 0 0.118 1.186 10.878 0.833 3.095 LGA K 607 K 607 13.459 0 0.550 1.167 16.235 0.000 0.000 LGA S 608 S 608 15.811 0 0.202 0.768 17.543 0.000 0.000 LGA I 609 I 609 21.774 0 0.157 1.282 24.546 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 7.263 7.096 7.833 43.278 38.750 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 33 2.05 49.554 50.750 1.537 LGA_LOCAL RMSD: 2.047 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.482 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 7.263 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.811333 * X + 0.161613 * Y + 0.561801 * Z + -46.214085 Y_new = -0.576620 * X + 0.063144 * Y + 0.814569 * Z + 75.563301 Z_new = 0.096171 * X + -0.984832 * Y + 0.144420 * Z + -22.868439 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.617876 -0.096320 -1.425190 [DEG: -35.4017 -5.5187 -81.6574 ] ZXZ: 2.537819 1.425870 3.044250 [DEG: 145.4063 81.6963 174.4227 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS253_1_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS253_1_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 33 2.05 50.750 7.26 REMARK ---------------------------------------------------------- MOLECULE T0547TS253_1_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 1 REMARK PFRMAT TS REMARK TARGET T0547 REMARK PARENT 1tuf_A 1hkv_A 2j66_A 1knw_A 2qgh_A ATOM 8887 N GLN 554 -12.256 102.922 -4.720 1.00 0.50 N ATOM 8888 CA GLN 554 -13.502 102.869 -5.477 1.00 0.50 C ATOM 8889 C GLN 554 -14.322 104.136 -5.277 1.00 0.50 C ATOM 8890 O GLN 554 -15.105 104.524 -6.145 1.00 0.50 O ATOM 8891 CB GLN 554 -14.328 101.646 -5.065 1.00 0.50 C ATOM 8892 CG GLN 554 -13.630 100.320 -5.340 1.00 0.50 C ATOM 8893 CD GLN 554 -13.233 100.158 -6.796 1.00 0.50 C ATOM 8894 OE1 GLN 554 -14.038 100.388 -7.704 1.00 0.50 O ATOM 8895 NE2 GLN 554 -11.988 99.757 -7.034 1.00 0.50 N ATOM 8904 N SER 555 -14.140 104.779 -4.128 1.00 0.50 N ATOM 8905 CA SER 555 -14.866 106.002 -3.811 1.00 0.50 C ATOM 8906 C SER 555 -14.360 107.174 -4.643 1.00 0.50 C ATOM 8907 O SER 555 -15.147 107.972 -5.152 1.00 0.50 O ATOM 8908 CB SER 555 -14.735 106.329 -2.322 1.00 0.50 C ATOM 8909 OG SER 555 -15.435 107.523 -2.012 1.00 0.50 O ATOM 8915 N ILE 556 -13.042 107.274 -4.775 1.00 0.50 N ATOM 8916 CA ILE 556 -12.429 108.343 -5.554 1.00 0.50 C ATOM 8917 C ILE 556 -12.570 108.086 -7.049 1.00 0.50 C ATOM 8918 O ILE 556 -13.158 108.888 -7.774 1.00 0.50 O ATOM 8919 CB ILE 556 -10.931 108.504 -5.199 1.00 0.50 C ATOM 8920 CG1 ILE 556 -10.361 109.763 -5.863 1.00 0.50 C ATOM 8921 CG2 ILE 556 -10.140 107.264 -5.620 1.00 0.50 C ATOM 8922 CD1 ILE 556 -10.993 111.056 -5.371 1.00 0.50 C ATOM 8934 N LEU 557 -12.026 106.962 -7.506 1.00 0.50 N ATOM 8935 CA LEU 557 -12.096 106.594 -8.915 1.00 0.50 C ATOM 8936 C LEU 557 -13.512 106.751 -9.455 1.00 0.50 C ATOM 8937 O LEU 557 -13.745 107.498 -10.404 1.00 0.50 O ATOM 8938 CB LEU 557 -11.627 105.148 -9.109 1.00 0.50 C ATOM 8939 CG LEU 557 -11.683 104.604 -10.539 1.00 0.50 C ATOM 8940 CD1 LEU 557 -10.746 105.398 -11.440 1.00 0.50 C ATOM 8941 CD2 LEU 557 -11.310 103.128 -10.553 1.00 0.50 C ATOM 8953 N ASP 558 -14.455 106.041 -8.844 1.00 0.50 N ATOM 8954 CA ASP 558 -15.853 106.115 -9.249 1.00 0.50 C ATOM 8955 C ASP 558 -16.320 107.561 -9.353 1.00 0.50 C ATOM 8956 O ASP 558 -16.969 107.946 -10.326 1.00 0.50 O ATOM 8957 CB ASP 558 -16.737 105.348 -8.260 1.00 0.50 C ATOM 8958 CG ASP 558 -16.516 103.848 -8.302 1.00 0.50 C ATOM 8959 OD1 ASP 558 -16.548 103.255 -9.400 1.00 0.50 O ATOM 8960 OD2 ASP 558 -16.311 103.254 -7.219 1.00 0.50 O ATOM 8965 N THR 559 -15.989 108.359 -8.343 1.00 0.50 N ATOM 8966 CA THR 559 -16.356 109.770 -8.328 1.00 0.50 C ATOM 8967 C THR 559 -16.015 110.441 -9.653 1.00 0.50 C ATOM 8968 O THR 559 -16.867 111.074 -10.276 1.00 0.50 O ATOM 8969 CB THR 559 -15.643 110.519 -7.180 1.00 0.50 C ATOM 8970 OG1 THR 559 -16.033 109.930 -5.933 1.00 0.50 O ATOM 8971 CG2 THR 559 -16.013 111.995 -7.174 1.00 0.50 C ATOM 8979 N LEU 560 -14.763 110.302 -10.076 1.00 0.50 N ATOM 8980 CA LEU 560 -14.309 110.893 -11.329 1.00 0.50 C ATOM 8981 C LEU 560 -15.012 110.261 -12.524 1.00 0.50 C ATOM 8982 O LEU 560 -15.301 110.934 -13.512 1.00 0.50 O ATOM 8983 CB LEU 560 -12.792 110.725 -11.476 1.00 0.50 C ATOM 8984 CG LEU 560 -11.927 111.456 -10.444 1.00 0.50 C ATOM 8985 CD1 LEU 560 -10.579 110.764 -10.305 1.00 0.50 C ATOM 8986 CD2 LEU 560 -11.740 112.911 -10.856 1.00 0.50 C ATOM 8998 N GLU 561 -15.282 108.964 -12.426 1.00 0.50 N ATOM 8999 CA GLU 561 -16.073 108.268 -13.434 1.00 0.50 C ATOM 9000 C GLU 561 -17.416 108.955 -13.649 1.00 0.50 C ATOM 9001 O GLU 561 -17.865 109.119 -14.784 1.00 0.50 O ATOM 9002 CB GLU 561 -16.295 106.808 -13.026 1.00 0.50 C ATOM 9003 CG GLU 561 -16.914 105.951 -14.123 1.00 0.50 C ATOM 9004 CD GLU 561 -18.430 106.030 -14.162 1.00 0.50 C ATOM 9005 OE1 GLU 561 -19.047 106.444 -13.158 1.00 0.50 O ATOM 9006 OE2 GLU 561 -19.009 105.662 -15.213 1.00 0.50 O ATOM 9013 N ASP 562 -18.055 109.352 -12.554 1.00 0.50 N ATOM 9014 CA ASP 562 -19.333 110.051 -12.623 1.00 0.50 C ATOM 9015 C ASP 562 -19.181 111.411 -13.291 1.00 0.50 C ATOM 9016 O ASP 562 -20.070 111.861 -14.014 1.00 0.50 O ATOM 9017 CB ASP 562 -19.926 110.218 -11.221 1.00 0.50 C ATOM 9018 CG ASP 562 -20.461 108.923 -10.641 1.00 0.50 C ATOM 9019 OD1 ASP 562 -20.610 107.933 -11.387 1.00 0.50 O ATOM 9020 OD2 ASP 562 -20.740 108.897 -9.421 1.00 0.50 O ATOM 9025 N LEU 563 -18.051 112.065 -13.043 1.00 0.50 N ATOM 9026 CA LEU 563 -17.774 113.368 -13.633 1.00 0.50 C ATOM 9027 C LEU 563 -17.131 113.227 -15.007 1.00 0.50 C ATOM 9028 O LEU 563 -16.798 114.222 -15.652 1.00 0.50 O ATOM 9029 CB LEU 563 -16.856 114.183 -12.714 1.00 0.50 C ATOM 9030 CG LEU 563 -17.412 114.521 -11.329 1.00 0.50 C ATOM 9031 CD1 LEU 563 -16.355 115.239 -10.500 1.00 0.50 C ATOM 9032 CD2 LEU 563 -18.661 115.382 -11.461 1.00 0.50 C ATOM 9044 N ASP 564 -16.956 111.987 -15.448 1.00 0.50 N ATOM 9045 CA ASP 564 -16.352 111.712 -16.746 1.00 0.50 C ATOM 9046 C ASP 564 -15.253 112.719 -17.065 1.00 0.50 C ATOM 9047 O ASP 564 -15.306 113.406 -18.085 1.00 0.50 O ATOM 9048 CB ASP 564 -17.416 111.734 -17.846 1.00 0.50 C ATOM 9049 CG ASP 564 -18.456 110.639 -17.690 1.00 0.50 C ATOM 9050 OD1 ASP 564 -18.083 109.458 -17.527 1.00 0.50 O ATOM 9051 OD2 ASP 564 -19.664 110.966 -17.736 1.00 0.50 O ATOM 9056 N TYR 565 -14.261 112.803 -16.186 1.00 0.50 N ATOM 9057 CA TYR 565 -13.149 113.727 -16.372 1.00 0.50 C ATOM 9058 C TYR 565 -12.014 113.072 -17.149 1.00 0.50 C ATOM 9059 O TYR 565 -12.062 111.879 -17.451 1.00 0.50 O ATOM 9060 CB TYR 565 -12.630 114.221 -15.015 1.00 0.50 C ATOM 9061 CG TYR 565 -13.657 114.996 -14.219 1.00 0.50 C ATOM 9062 CD1 TYR 565 -14.745 115.595 -14.847 1.00 0.50 C ATOM 9063 CD2 TYR 565 -13.533 115.129 -12.837 1.00 0.50 C ATOM 9064 CE1 TYR 565 -15.691 116.311 -14.119 1.00 0.50 C ATOM 9065 CE2 TYR 565 -14.471 115.843 -12.100 1.00 0.50 C ATOM 9066 CZ TYR 565 -15.545 116.429 -12.747 1.00 0.50 C ATOM 9067 OH TYR 565 -16.477 117.136 -12.019 1.00 0.50 H ATOM 9077 N ASP 566 -10.992 113.858 -17.472 1.00 0.50 N ATOM 9078 CA ASP 566 -9.843 113.357 -18.215 1.00 0.50 C ATOM 9079 C ASP 566 -8.827 112.706 -17.285 1.00 0.50 C ATOM 9080 O ASP 566 -8.765 113.025 -16.097 1.00 0.50 O ATOM 9081 CB ASP 566 -9.180 114.492 -19.003 1.00 0.50 C ATOM 9082 CG ASP 566 -10.001 114.948 -20.195 1.00 0.50 C ATOM 9083 OD1 ASP 566 -10.986 114.271 -20.557 1.00 0.50 O ATOM 9084 OD2 ASP 566 -9.653 115.999 -20.779 1.00 0.50 O ATOM 9089 N ILE 567 -8.032 111.792 -17.832 1.00 0.50 N ATOM 9090 CA ILE 567 -7.018 111.094 -17.051 1.00 0.50 C ATOM 9091 C ILE 567 -6.244 112.060 -16.164 1.00 0.50 C ATOM 9092 O ILE 567 -6.163 111.875 -14.950 1.00 0.50 O ATOM 9093 CB ILE 567 -6.031 110.335 -17.969 1.00 0.50 C ATOM 9094 CG1 ILE 567 -6.752 109.197 -18.700 1.00 0.50 C ATOM 9095 CG2 ILE 567 -4.847 109.797 -17.163 1.00 0.50 C ATOM 9096 CD1 ILE 567 -5.940 108.580 -19.828 1.00 0.50 C ATOM 9108 N HIS 568 -5.672 113.091 -16.778 1.00 0.50 N ATOM 9109 CA HIS 568 -4.902 114.089 -16.046 1.00 0.50 C ATOM 9110 C HIS 568 -5.660 114.576 -14.817 1.00 0.50 C ATOM 9111 O HIS 568 -5.105 114.643 -13.720 1.00 0.50 O ATOM 9112 CB HIS 568 -4.569 115.280 -16.956 1.00 0.50 C ATOM 9113 CG HIS 568 -5.767 116.111 -17.301 1.00 0.50 C ATOM 9114 ND1 HIS 568 -6.734 115.694 -18.190 1.00 0.50 N ATOM 9115 CD2 HIS 568 -6.146 117.339 -16.864 1.00 0.50 C ATOM 9116 CE1 HIS 568 -7.661 116.637 -18.287 1.00 0.50 C ATOM 9117 NE2 HIS 568 -7.328 117.644 -17.493 1.00 0.50 N ATOM 9125 N ALA 569 -6.930 114.915 -15.007 1.00 0.50 N ATOM 9126 CA ALA 569 -7.766 115.396 -13.914 1.00 0.50 C ATOM 9127 C ALA 569 -7.940 114.327 -12.842 1.00 0.50 C ATOM 9128 O ALA 569 -7.831 114.609 -11.649 1.00 0.50 O ATOM 9129 CB ALA 569 -9.130 115.831 -14.445 1.00 0.50 C ATOM 9135 N ILE 570 -8.213 113.101 -13.275 1.00 0.50 N ATOM 9136 CA ILE 570 -8.401 111.988 -12.353 1.00 0.50 C ATOM 9137 C ILE 570 -7.270 111.916 -11.336 1.00 0.50 C ATOM 9138 O ILE 570 -7.471 111.492 -10.198 1.00 0.50 O ATOM 9139 CB ILE 570 -8.495 110.644 -13.112 1.00 0.50 C ATOM 9140 CG1 ILE 570 -9.790 110.584 -13.932 1.00 0.50 C ATOM 9141 CG2 ILE 570 -8.417 109.466 -12.139 1.00 0.50 C ATOM 9142 CD1 ILE 570 -9.840 109.426 -14.916 1.00 0.50 C ATOM 9154 N MET 571 -6.079 112.332 -11.754 1.00 0.50 N ATOM 9155 CA MET 571 -4.911 112.314 -10.881 1.00 0.50 C ATOM 9156 C MET 571 -4.998 113.405 -9.821 1.00 0.50 C ATOM 9157 O MET 571 -4.830 113.143 -8.630 1.00 0.50 O ATOM 9158 CB MET 571 -3.628 112.485 -11.699 1.00 0.50 C ATOM 9159 CG MET 571 -3.310 111.290 -12.588 1.00 0.50 C ATOM 9160 SD MET 571 -2.968 109.795 -11.627 1.00 0.50 S ATOM 9161 CE MET 571 -1.399 110.228 -10.888 1.00 0.50 C ATOM 9171 N ASP 572 -5.260 114.631 -10.263 1.00 0.50 N ATOM 9172 CA ASP 572 -5.371 115.765 -9.353 1.00 0.50 C ATOM 9173 C ASP 572 -6.388 115.492 -8.253 1.00 0.50 C ATOM 9174 O ASP 572 -6.127 115.743 -7.076 1.00 0.50 O ATOM 9175 CB ASP 572 -5.760 117.031 -10.124 1.00 0.50 C ATOM 9176 CG ASP 572 -4.631 117.582 -10.973 1.00 0.50 C ATOM 9177 OD1 ASP 572 -3.471 117.149 -10.809 1.00 0.50 O ATOM 9178 OD2 ASP 572 -4.909 118.464 -11.817 1.00 0.50 O ATOM 9183 N ILE 573 -7.549 114.978 -8.643 1.00 0.50 N ATOM 9184 CA ILE 573 -8.609 114.668 -7.691 1.00 0.50 C ATOM 9185 C ILE 573 -8.153 113.623 -6.680 1.00 0.50 C ATOM 9186 O ILE 573 -8.460 113.719 -5.492 1.00 0.50 O ATOM 9187 CB ILE 573 -9.880 114.164 -8.414 1.00 0.50 C ATOM 9188 CG1 ILE 573 -10.443 115.261 -9.326 1.00 0.50 C ATOM 9189 CG2 ILE 573 -10.933 113.709 -7.402 1.00 0.50 C ATOM 9190 CD1 ILE 573 -10.859 116.522 -8.584 1.00 0.50 C ATOM 9202 N LEU 574 -7.421 112.624 -7.161 1.00 0.50 N ATOM 9203 CA LEU 574 -6.923 111.556 -6.301 1.00 0.50 C ATOM 9204 C LEU 574 -6.041 112.109 -5.190 1.00 0.50 C ATOM 9205 O LEU 574 -6.068 111.621 -4.060 1.00 0.50 O ATOM 9206 CB LEU 574 -6.135 110.534 -7.126 1.00 0.50 C ATOM 9207 CG LEU 574 -6.949 109.672 -8.095 1.00 0.50 C ATOM 9208 CD1 LEU 574 -6.019 108.841 -8.968 1.00 0.50 C ATOM 9209 CD2 LEU 574 -7.900 108.769 -7.320 1.00 0.50 C ATOM 9221 N ASN 575 -5.255 113.130 -5.518 1.00 0.50 N ATOM 9222 CA ASN 575 -4.363 113.753 -4.548 1.00 0.50 C ATOM 9223 C ASN 575 -5.143 114.575 -3.529 1.00 0.50 C ATOM 9224 O ASN 575 -5.097 114.299 -2.330 1.00 0.50 O ATOM 9225 CB ASN 575 -3.330 114.634 -5.262 1.00 0.50 C ATOM 9226 CG ASN 575 -2.282 115.183 -4.313 1.00 0.50 C ATOM 9227 OD1 ASN 575 -2.488 115.224 -3.097 1.00 0.50 O ATOM 9228 ND2 ASN 575 -1.151 115.612 -4.858 1.00 0.50 N ATOM 9235 N GLU 576 -5.859 115.585 -4.013 1.00 0.50 N ATOM 9236 CA GLU 576 -6.651 116.448 -3.146 1.00 0.50 C ATOM 9237 C GLU 576 -7.650 115.639 -2.328 1.00 0.50 C ATOM 9238 O GLU 576 -7.684 115.733 -1.102 1.00 0.50 O ATOM 9239 CB GLU 576 -7.391 117.504 -3.973 1.00 0.50 C ATOM 9240 CG GLU 576 -6.660 118.838 -4.059 1.00 0.50 C ATOM 9241 CD GLU 576 -7.160 119.724 -5.186 1.00 0.50 C ATOM 9242 OE1 GLU 576 -8.390 119.892 -5.332 1.00 0.50 O ATOM 9243 OE2 GLU 576 -6.307 120.251 -5.939 1.00 0.50 O ATOM 9250 N ARG 577 -8.464 114.844 -3.016 1.00 0.50 N ATOM 9251 CA ARG 577 -9.466 114.017 -2.354 1.00 0.50 C ATOM 9252 C ARG 577 -8.853 113.213 -1.216 1.00 0.50 C ATOM 9253 O ARG 577 -9.456 113.065 -0.152 1.00 0.50 O ATOM 9254 CB ARG 577 -10.128 113.071 -3.359 1.00 0.50 C ATOM 9255 CG ARG 577 -11.192 112.173 -2.744 1.00 0.50 C ATOM 9256 CD ARG 577 -11.856 111.294 -3.793 1.00 0.50 C ATOM 9257 NE ARG 577 -12.870 110.422 -3.204 1.00 0.50 N ATOM 9258 CZ ARG 577 -14.129 110.777 -2.953 1.00 0.50 C ATOM 9259 NH1 ARG 577 -14.615 111.930 -3.407 1.00 0.50 H ATOM 9260 NH2 ARG 577 -14.906 109.975 -2.231 1.00 0.50 H ATOM 9274 N ILE 578 -7.652 112.694 -1.444 1.00 0.50 N ATOM 9275 CA ILE 578 -7.016 111.787 -0.496 1.00 0.50 C ATOM 9276 C ILE 578 -6.698 112.494 0.815 1.00 0.50 C ATOM 9277 O ILE 578 -6.815 111.909 1.891 1.00 0.50 O ATOM 9278 CB ILE 578 -5.717 111.185 -1.084 1.00 0.50 C ATOM 9279 CG1 ILE 578 -6.046 110.251 -2.255 1.00 0.50 C ATOM 9280 CG2 ILE 578 -4.929 110.442 -0.003 1.00 0.50 C ATOM 9281 CD1 ILE 578 -4.828 109.825 -3.059 1.00 0.50 C ATOM 9293 N SER 579 -6.293 113.755 0.718 1.00 0.50 N ATOM 9294 CA SER 579 -6.043 114.574 1.898 1.00 0.50 C ATOM 9295 C SER 579 -7.316 114.776 2.708 1.00 0.50 C ATOM 9296 O SER 579 -7.296 114.727 3.938 1.00 0.50 O ATOM 9297 CB SER 579 -5.465 115.932 1.492 1.00 0.50 C ATOM 9298 OG SER 579 -4.176 115.775 0.922 1.00 0.50 O ATOM 9304 N ASN 580 -8.425 115.006 2.012 1.00 0.50 N ATOM 9305 CA ASN 580 -9.685 115.339 2.665 1.00 0.50 C ATOM 9306 C ASN 580 -10.116 114.240 3.626 1.00 0.50 C ATOM 9307 O ASN 580 -10.406 114.500 4.794 1.00 0.50 O ATOM 9308 CB ASN 580 -10.779 115.589 1.620 1.00 0.50 C ATOM 9309 CG ASN 580 -10.578 116.891 0.869 1.00 0.50 C ATOM 9310 OD1 ASN 580 -9.823 117.765 1.308 1.00 0.50 O ATOM 9311 ND2 ASN 580 -11.249 117.035 -0.267 1.00 0.50 N ATOM 9318 N SER 581 -10.159 113.009 3.127 1.00 0.50 N ATOM 9319 CA SER 581 -10.556 111.866 3.940 1.00 0.50 C ATOM 9320 C SER 581 -9.375 111.313 4.726 1.00 0.50 C ATOM 9321 O SER 581 -8.736 110.347 4.308 1.00 0.50 O ATOM 9322 CB SER 581 -11.153 110.765 3.058 1.00 0.50 C ATOM 9323 OG SER 581 -11.605 109.683 3.854 1.00 0.50 O ATOM 9329 N LYS 582 -9.087 111.931 5.867 1.00 0.50 N ATOM 9330 CA LYS 582 -7.857 111.655 6.599 1.00 0.50 C ATOM 9331 C LYS 582 -7.890 110.269 7.231 1.00 0.50 C ATOM 9332 O LYS 582 -6.956 109.870 7.926 1.00 0.50 O ATOM 9333 CB LYS 582 -7.632 112.713 7.682 1.00 0.50 C ATOM 9334 CG LYS 582 -7.380 114.110 7.134 1.00 0.50 C ATOM 9335 CD LYS 582 -7.163 115.117 8.255 1.00 0.50 C ATOM 9336 CE LYS 582 -6.950 116.526 7.714 1.00 0.50 C ATOM 9337 NZ LYS 582 -6.761 117.517 8.811 1.00 0.50 N ATOM 9351 N LEU 583 -8.974 109.540 6.987 1.00 0.50 N ATOM 9352 CA LEU 583 -9.085 108.158 7.439 1.00 0.50 C ATOM 9353 C LEU 583 -7.994 107.289 6.825 1.00 0.50 C ATOM 9354 O LEU 583 -7.819 106.133 7.210 1.00 0.50 O ATOM 9355 CB LEU 583 -10.462 107.591 7.078 1.00 0.50 C ATOM 9356 CG LEU 583 -11.663 108.231 7.780 1.00 0.50 C ATOM 9357 CD1 LEU 583 -12.961 107.649 7.235 1.00 0.50 C ATOM 9358 CD2 LEU 583 -11.570 108.009 9.284 1.00 0.50 C ATOM 9370 N VAL 584 -7.265 107.852 5.868 1.00 0.50 N ATOM 9371 CA VAL 584 -6.272 107.095 5.115 1.00 0.50 C ATOM 9372 C VAL 584 -4.863 107.605 5.393 1.00 0.50 C ATOM 9373 O VAL 584 -4.648 108.807 5.548 1.00 0.50 O ATOM 9374 CB VAL 584 -6.550 107.160 3.596 1.00 0.50 C ATOM 9375 CG1 VAL 584 -5.472 106.412 2.817 1.00 0.50 C ATOM 9376 CG2 VAL 584 -7.924 106.580 3.283 1.00 0.50 C ATOM 9386 N ASN 585 -3.907 106.684 5.457 1.00 0.50 N ATOM 9387 CA ASN 585 -2.502 107.047 5.597 1.00 0.50 C ATOM 9388 C ASN 585 -1.920 107.514 4.269 1.00 0.50 C ATOM 9389 O ASN 585 -2.530 107.336 3.215 1.00 0.50 O ATOM 9390 CB ASN 585 -1.697 105.863 6.142 1.00 0.50 C ATOM 9391 CG ASN 585 -2.080 105.506 7.567 1.00 0.50 C ATOM 9392 OD1 ASN 585 -1.942 106.325 8.482 1.00 0.50 O ATOM 9393 ND2 ASN 585 -2.563 104.288 7.768 1.00 0.50 N ATOM 9400 N ASP 586 -0.735 108.115 4.326 1.00 0.50 N ATOM 9401 CA ASP 586 -0.035 108.545 3.122 1.00 0.50 C ATOM 9402 C ASP 586 0.060 107.414 2.107 1.00 0.50 C ATOM 9403 O ASP 586 0.002 107.644 0.899 1.00 0.50 O ATOM 9404 CB ASP 586 1.366 109.053 3.473 1.00 0.50 C ATOM 9405 CG ASP 586 1.354 110.402 4.168 1.00 0.50 C ATOM 9406 OD1 ASP 586 0.303 111.076 4.183 1.00 0.50 O ATOM 9407 OD2 ASP 586 2.416 110.795 4.704 1.00 0.50 O ATOM 9412 N LYS 587 0.209 106.190 2.603 1.00 0.50 N ATOM 9413 CA LYS 587 0.306 105.019 1.740 1.00 0.50 C ATOM 9414 C LYS 587 -1.037 104.694 1.100 1.00 0.50 C ATOM 9415 O LYS 587 -1.118 104.441 -0.103 1.00 0.50 O ATOM 9416 CB LYS 587 0.809 103.810 2.533 1.00 0.50 C ATOM 9417 CG LYS 587 2.257 103.931 2.984 1.00 0.50 C ATOM 9418 CD LYS 587 2.705 102.694 3.752 1.00 0.50 C ATOM 9419 CE LYS 587 4.137 102.832 4.256 1.00 0.50 C ATOM 9420 NZ LYS 587 4.572 101.628 5.020 1.00 0.50 N ATOM 9434 N GLN 588 -2.090 104.701 1.910 1.00 0.50 N ATOM 9435 CA GLN 588 -3.424 104.354 1.436 1.00 0.50 C ATOM 9436 C GLN 588 -3.945 105.392 0.449 1.00 0.50 C ATOM 9437 O GLN 588 -4.403 105.052 -0.642 1.00 0.50 O ATOM 9438 CB GLN 588 -4.395 104.223 2.613 1.00 0.50 C ATOM 9439 CG GLN 588 -4.137 102.999 3.483 1.00 0.50 C ATOM 9440 CD GLN 588 -4.964 103.000 4.756 1.00 0.50 C ATOM 9441 OE1 GLN 588 -5.818 103.870 4.957 1.00 0.50 O ATOM 9442 NE2 GLN 588 -4.717 102.029 5.629 1.00 0.50 N ATOM 9451 N LYS 589 -3.873 106.659 0.840 1.00 0.50 N ATOM 9452 CA LYS 589 -4.279 107.755 -0.034 1.00 0.50 C ATOM 9453 C LYS 589 -3.321 107.906 -1.209 1.00 0.50 C ATOM 9454 O LYS 589 -3.734 107.869 -2.367 1.00 0.50 O ATOM 9455 CB LYS 589 -4.349 109.067 0.751 1.00 0.50 C ATOM 9456 CG LYS 589 -5.383 109.061 1.867 1.00 0.50 C ATOM 9457 CD LYS 589 -5.506 110.431 2.519 1.00 0.50 C ATOM 9458 CE LYS 589 -4.242 110.807 3.285 1.00 0.50 C ATOM 9459 NZ LYS 589 -3.981 109.867 4.412 1.00 0.50 N ATOM 9473 N LYS 590 -2.039 108.079 -0.902 1.00 0.50 N ATOM 9474 CA LYS 590 -1.023 108.258 -1.932 1.00 0.50 C ATOM 9475 C LYS 590 -0.778 106.963 -2.696 1.00 0.50 C ATOM 9476 O LYS 590 -1.020 106.887 -3.901 1.00 0.50 O ATOM 9477 CB LYS 590 0.287 108.750 -1.311 1.00 0.50 C ATOM 9478 CG LYS 590 1.389 109.009 -2.327 1.00 0.50 C ATOM 9479 CD LYS 590 2.645 109.553 -1.659 1.00 0.50 C ATOM 9480 CE LYS 590 3.753 109.814 -2.672 1.00 0.50 C ATOM 9481 NZ LYS 590 4.986 110.341 -2.019 1.00 0.50 N ATOM 9495 N HIS 591 -0.298 105.946 -1.989 1.00 0.50 N ATOM 9496 CA HIS 591 -0.026 104.650 -2.598 1.00 0.50 C ATOM 9497 C HIS 591 -1.203 104.180 -3.442 1.00 0.50 C ATOM 9498 O HIS 591 -1.020 103.553 -4.486 1.00 0.50 O ATOM 9499 CB HIS 591 0.285 103.606 -1.516 1.00 0.50 C ATOM 9500 CG HIS 591 0.536 102.238 -2.071 1.00 0.50 C ATOM 9501 ND1 HIS 591 1.711 101.891 -2.704 1.00 0.50 N ATOM 9502 CD2 HIS 591 -0.249 101.130 -2.079 1.00 0.50 C ATOM 9503 CE1 HIS 591 1.636 100.623 -3.080 1.00 0.50 C ATOM 9504 NE2 HIS 591 0.460 100.139 -2.713 1.00 0.50 N ATOM 9512 N ILE 592 -2.413 104.485 -2.985 1.00 0.50 N ATOM 9513 CA ILE 592 -3.621 104.129 -3.718 1.00 0.50 C ATOM 9514 C ILE 592 -3.619 104.738 -5.114 1.00 0.50 C ATOM 9515 O ILE 592 -3.907 104.058 -6.099 1.00 0.50 O ATOM 9516 CB ILE 592 -4.889 104.588 -2.959 1.00 0.50 C ATOM 9517 CG1 ILE 592 -5.003 103.852 -1.620 1.00 0.50 C ATOM 9518 CG2 ILE 592 -6.140 104.358 -3.810 1.00 0.50 C ATOM 9519 CD1 ILE 592 -5.143 102.343 -1.758 1.00 0.50 C ATOM 9531 N LEU 593 -3.293 106.024 -5.193 1.00 0.50 N ATOM 9532 CA LEU 593 -3.247 106.725 -6.470 1.00 0.50 C ATOM 9533 C LEU 593 -2.250 106.076 -7.420 1.00 0.50 C ATOM 9534 O LEU 593 -2.422 106.115 -8.639 1.00 0.50 O ATOM 9535 CB LEU 593 -2.872 108.196 -6.254 1.00 0.50 C ATOM 9536 CG LEU 593 -2.801 109.068 -7.511 1.00 0.50 C ATOM 9537 CD1 LEU 593 -4.161 109.115 -8.195 1.00 0.50 C ATOM 9538 CD2 LEU 593 -2.338 110.473 -7.148 1.00 0.50 C ATOM 9550 N GLY 594 -1.204 105.481 -6.856 1.00 0.50 N ATOM 9551 CA GLY 594 -0.178 104.820 -7.653 1.00 0.50 C ATOM 9552 C GLY 594 -0.645 103.449 -8.127 1.00 0.50 C ATOM 9553 O GLY 594 -0.300 103.011 -9.224 1.00 0.50 O ATOM 9557 N GLU 595 -1.431 102.777 -7.293 1.00 0.50 N ATOM 9558 CA GLU 595 -1.945 101.453 -7.625 1.00 0.50 C ATOM 9559 C GLU 595 -3.182 101.548 -8.509 1.00 0.50 C ATOM 9560 O GLU 595 -3.377 100.732 -9.409 1.00 0.50 O ATOM 9561 CB GLU 595 -2.277 100.674 -6.349 1.00 0.50 C ATOM 9562 CG GLU 595 -1.065 100.383 -5.474 1.00 0.50 C ATOM 9563 CD GLU 595 -0.020 99.524 -6.163 1.00 0.50 C ATOM 9564 OE1 GLU 595 -0.376 98.475 -6.743 1.00 0.50 O ATOM 9565 OE2 GLU 595 1.175 99.901 -6.113 1.00 0.50 O ATOM 9572 N LEU 596 -4.015 102.549 -8.246 1.00 0.50 N ATOM 9573 CA LEU 596 -5.240 102.748 -9.012 1.00 0.50 C ATOM 9574 C LEU 596 -4.976 103.568 -10.268 1.00 0.50 C ATOM 9575 O LEU 596 -5.354 104.737 -10.349 1.00 0.50 O ATOM 9576 CB LEU 596 -6.297 103.447 -8.150 1.00 0.50 C ATOM 9577 CG LEU 596 -7.646 103.719 -8.821 1.00 0.50 C ATOM 9578 CD1 LEU 596 -8.369 102.408 -9.099 1.00 0.50 C ATOM 9579 CD2 LEU 596 -8.499 104.621 -7.938 1.00 0.50 C ATOM 9591 N TYR 597 -4.326 102.949 -11.247 1.00 0.50 N ATOM 9592 CA TYR 597 -4.010 103.621 -12.503 1.00 0.50 C ATOM 9593 C TYR 597 -5.044 103.300 -13.573 1.00 0.50 C ATOM 9594 O TYR 597 -4.716 103.197 -14.756 1.00 0.50 O ATOM 9595 CB TYR 597 -2.614 103.212 -12.992 1.00 0.50 C ATOM 9596 CG TYR 597 -2.444 101.719 -13.164 1.00 0.50 C ATOM 9597 CD1 TYR 597 -2.754 101.097 -14.372 1.00 0.50 C ATOM 9598 CD2 TYR 597 -1.974 100.931 -12.116 1.00 0.50 C ATOM 9599 CE1 TYR 597 -2.603 99.723 -14.532 1.00 0.50 C ATOM 9600 CE2 TYR 597 -1.819 99.557 -12.265 1.00 0.50 C ATOM 9601 CZ TYR 597 -2.134 98.963 -13.476 1.00 0.50 C ATOM 9602 OH TYR 597 -1.980 97.603 -13.627 1.00 0.50 H ATOM 9612 N LEU 598 -6.294 103.139 -13.153 1.00 0.50 N ATOM 9613 CA LEU 598 -7.379 102.829 -14.076 1.00 0.50 C ATOM 9614 C LEU 598 -8.343 104.001 -14.207 1.00 0.50 C ATOM 9615 O LEU 598 -8.773 104.577 -13.208 1.00 0.50 O ATOM 9616 CB LEU 598 -8.139 101.585 -13.602 1.00 0.50 C ATOM 9617 CG LEU 598 -7.496 100.234 -13.928 1.00 0.50 C ATOM 9618 CD1 LEU 598 -6.233 100.040 -13.098 1.00 0.50 C ATOM 9619 CD2 LEU 598 -8.485 99.106 -13.664 1.00 0.50 C ATOM 9631 N PHE 599 -8.679 104.350 -15.444 1.00 0.50 N ATOM 9632 CA PHE 599 -9.559 105.481 -15.710 1.00 0.50 C ATOM 9633 C PHE 599 -10.708 105.082 -16.628 1.00 0.50 C ATOM 9634 O PHE 599 -10.491 104.522 -17.701 1.00 0.50 O ATOM 9635 CB PHE 599 -8.771 106.638 -16.339 1.00 0.50 C ATOM 9636 CG PHE 599 -7.651 107.153 -15.469 1.00 0.50 C ATOM 9637 CD1 PHE 599 -6.364 106.643 -15.595 1.00 0.50 C ATOM 9638 CD2 PHE 599 -7.892 108.146 -14.525 1.00 0.50 C ATOM 9639 CE1 PHE 599 -5.329 107.116 -14.792 1.00 0.50 C ATOM 9640 CE2 PHE 599 -6.864 108.624 -13.718 1.00 0.50 C ATOM 9641 CZ PHE 599 -5.581 108.107 -13.853 1.00 0.50 C ATOM 9651 N LEU 600 -11.930 105.374 -16.196 1.00 0.50 N ATOM 9652 CA LEU 600 -13.117 105.041 -16.976 1.00 0.50 C ATOM 9653 C LEU 600 -13.410 106.111 -18.019 1.00 0.50 C ATOM 9654 O LEU 600 -14.176 107.042 -17.770 1.00 0.50 O ATOM 9655 CB LEU 600 -14.330 104.874 -16.052 1.00 0.50 C ATOM 9656 CG LEU 600 -14.236 103.760 -15.007 1.00 0.50 C ATOM 9657 CD1 LEU 600 -15.491 103.744 -14.144 1.00 0.50 C ATOM 9658 CD2 LEU 600 -14.044 102.414 -15.692 1.00 0.50 C ATOM 9670 N ASN 601 -12.794 105.974 -19.189 1.00 0.50 N ATOM 9671 CA ASN 601 -12.987 106.931 -20.272 1.00 0.50 C ATOM 9672 C ASN 601 -14.421 107.444 -20.305 1.00 0.50 C ATOM 9673 O ASN 601 -15.262 107.018 -19.515 1.00 0.50 O ATOM 9674 CB ASN 601 -12.620 106.295 -21.619 1.00 0.50 C ATOM 9675 CG ASN 601 -11.126 106.080 -21.771 1.00 0.50 C ATOM 9676 OD1 ASN 601 -10.321 106.729 -21.096 1.00 0.50 O ATOM 9677 ND2 ASN 601 -10.741 105.170 -22.658 1.00 0.50 N ATOM 9684 N ASP 602 -14.693 108.366 -21.224 1.00 0.50 N ATOM 9685 CA ASP 602 -16.038 108.895 -21.403 1.00 0.50 C ATOM 9686 C ASP 602 -17.022 107.788 -21.766 1.00 0.50 C ATOM 9687 O ASP 602 -18.236 107.990 -21.738 1.00 0.50 O ATOM 9688 CB ASP 602 -16.047 109.979 -22.485 1.00 0.50 C ATOM 9689 CG ASP 602 -15.393 111.273 -22.037 1.00 0.50 C ATOM 9690 OD1 ASP 602 -15.146 111.447 -20.826 1.00 0.50 O ATOM 9691 OD2 ASP 602 -15.129 112.130 -22.911 1.00 0.50 O ATOM 9696 N ASN 603 -16.489 106.620 -22.109 1.00 0.50 N ATOM 9697 CA ASN 603 -17.317 105.489 -22.509 1.00 0.50 C ATOM 9698 C ASN 603 -17.433 104.467 -21.386 1.00 0.50 C ATOM 9699 O ASN 603 -17.993 103.387 -21.572 1.00 0.50 O ATOM 9700 CB ASN 603 -16.746 104.829 -23.770 1.00 0.50 C ATOM 9701 CG ASN 603 -16.803 105.742 -24.980 1.00 0.50 C ATOM 9702 OD1 ASN 603 -17.887 106.105 -25.449 1.00 0.50 O ATOM 9703 ND2 ASN 603 -15.640 106.122 -25.496 1.00 0.50 N ATOM 9710 N GLY 604 -16.898 104.814 -20.219 1.00 0.50 N ATOM 9711 CA GLY 604 -16.958 103.935 -19.058 1.00 0.50 C ATOM 9712 C GLY 604 -15.934 102.812 -19.164 1.00 0.50 C ATOM 9713 O GLY 604 -16.033 101.801 -18.468 1.00 0.50 O ATOM 9717 N TYR 605 -14.954 102.993 -20.041 1.00 0.50 N ATOM 9718 CA TYR 605 -13.908 101.996 -20.241 1.00 0.50 C ATOM 9719 C TYR 605 -12.771 102.184 -19.246 1.00 0.50 C ATOM 9720 O TYR 605 -12.377 103.311 -18.944 1.00 0.50 O ATOM 9721 CB TYR 605 -13.361 102.072 -21.673 1.00 0.50 C ATOM 9722 CG TYR 605 -12.279 101.056 -21.964 1.00 0.50 C ATOM 9723 CD1 TYR 605 -12.598 99.722 -22.208 1.00 0.50 C ATOM 9724 CD2 TYR 605 -10.939 101.433 -21.993 1.00 0.50 C ATOM 9725 CE1 TYR 605 -11.605 98.784 -22.474 1.00 0.50 C ATOM 9726 CE2 TYR 605 -9.938 100.503 -22.257 1.00 0.50 C ATOM 9727 CZ TYR 605 -10.280 99.182 -22.496 1.00 0.50 C ATOM 9728 OH TYR 605 -9.292 98.260 -22.760 1.00 0.50 H ATOM 9738 N LEU 606 -12.247 101.074 -18.735 1.00 0.50 N ATOM 9739 CA LEU 606 -11.165 101.115 -17.759 1.00 0.50 C ATOM 9740 C LEU 606 -9.825 101.375 -18.433 1.00 0.50 C ATOM 9741 O LEU 606 -9.447 100.676 -19.375 1.00 0.50 O ATOM 9742 CB LEU 606 -11.105 99.797 -16.979 1.00 0.50 C ATOM 9743 CG LEU 606 -12.325 99.463 -16.117 1.00 0.50 C ATOM 9744 CD1 LEU 606 -12.181 98.070 -15.521 1.00 0.50 C ATOM 9745 CD2 LEU 606 -12.487 100.501 -15.014 1.00 0.50 C ATOM 9757 N LYS 607 -9.110 102.384 -17.949 1.00 0.50 N ATOM 9758 CA LYS 607 -7.777 102.691 -18.455 1.00 0.50 C ATOM 9759 C LYS 607 -6.722 102.519 -17.370 1.00 0.50 C ATOM 9760 O LYS 607 -6.514 103.409 -16.546 1.00 0.50 O ATOM 9761 CB LYS 607 -7.729 104.121 -19.002 1.00 0.50 C ATOM 9762 CG LYS 607 -6.358 104.537 -19.512 1.00 0.50 C ATOM 9763 CD LYS 607 -5.961 103.746 -20.750 1.00 0.50 C ATOM 9764 CE LYS 607 -4.646 104.244 -21.339 1.00 0.50 C ATOM 9765 NZ LYS 607 -4.280 103.501 -22.579 1.00 0.50 N ATOM 9779 N SER 608 -6.061 101.366 -17.373 1.00 0.50 N ATOM 9780 CA SER 608 -5.002 101.087 -16.408 1.00 0.50 C ATOM 9781 C SER 608 -3.645 101.530 -16.937 1.00 0.50 C ATOM 9782 O SER 608 -3.157 101.007 -17.938 1.00 0.50 O ATOM 9783 CB SER 608 -4.966 99.594 -16.073 1.00 0.50 C ATOM 9784 OG SER 608 -3.908 99.313 -15.173 1.00 0.50 O ATOM 9790 N ILE 609 -3.039 102.500 -16.260 1.00 0.50 N ATOM 9791 CA ILE 609 -1.736 103.016 -16.660 1.00 0.50 C ATOM 9792 C ILE 609 -0.617 102.070 -16.243 1.00 0.50 C ATOM 9793 O ILE 609 -0.865 100.914 -15.899 1.00 0.50 O ATOM 9794 CB ILE 609 -1.479 104.416 -16.053 1.00 0.50 C ATOM 9795 CG1 ILE 609 -1.440 104.334 -14.523 1.00 0.50 C ATOM 9796 CG2 ILE 609 -2.549 105.409 -16.515 1.00 0.50 C ATOM 9797 CD1 ILE 609 -0.966 105.613 -13.853 1.00 0.50 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 54.76 75.5 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 38.11 88.6 70 100.0 70 ARMSMC SURFACE . . . . . . . . 55.08 74.4 90 100.0 90 ARMSMC BURIED . . . . . . . . 53.26 80.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.06 50.9 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 67.99 51.9 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 63.03 60.6 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 73.06 48.8 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 48.20 60.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.37 51.1 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 71.34 46.7 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 70.70 54.8 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 75.54 47.4 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 69.23 66.7 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.78 50.0 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 79.21 50.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 64.21 55.6 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 71.30 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 85.14 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 104.48 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 104.48 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 95.25 25.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 99.62 20.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 126.02 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.26 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.26 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1297 CRMSCA SECONDARY STRUCTURE . . 5.61 35 100.0 35 CRMSCA SURFACE . . . . . . . . 7.28 46 100.0 46 CRMSCA BURIED . . . . . . . . 7.16 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.29 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 5.57 174 100.0 174 CRMSMC SURFACE . . . . . . . . 7.33 228 100.0 228 CRMSMC BURIED . . . . . . . . 7.10 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.49 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 8.75 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 7.24 151 100.0 151 CRMSSC SURFACE . . . . . . . . 8.72 196 100.0 196 CRMSSC BURIED . . . . . . . . 7.22 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.84 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 6.41 291 100.0 291 CRMSALL SURFACE . . . . . . . . 8.00 380 100.0 380 CRMSALL BURIED . . . . . . . . 7.07 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.559 0.784 0.392 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 4.313 0.743 0.372 35 100.0 35 ERRCA SURFACE . . . . . . . . 5.577 0.784 0.392 46 100.0 46 ERRCA BURIED . . . . . . . . 5.475 0.785 0.393 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.579 0.785 0.393 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 4.290 0.744 0.372 174 100.0 174 ERRMC SURFACE . . . . . . . . 5.622 0.787 0.393 228 100.0 228 ERRMC BURIED . . . . . . . . 5.386 0.777 0.389 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.727 0.814 0.407 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 6.958 0.822 0.411 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 5.684 0.783 0.392 151 100.0 151 ERRSC SURFACE . . . . . . . . 6.931 0.819 0.410 196 100.0 196 ERRSC BURIED . . . . . . . . 5.702 0.789 0.395 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.088 0.797 0.399 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 4.933 0.761 0.381 291 100.0 291 ERRALL SURFACE . . . . . . . . 6.216 0.801 0.400 380 100.0 380 ERRALL BURIED . . . . . . . . 5.470 0.783 0.391 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 6 11 29 47 56 56 DISTCA CA (P) 1.79 10.71 19.64 51.79 83.93 56 DISTCA CA (RMS) 0.83 1.53 2.04 3.39 5.12 DISTCA ALL (N) 8 35 79 207 377 459 459 DISTALL ALL (P) 1.74 7.63 17.21 45.10 82.14 459 DISTALL ALL (RMS) 0.75 1.41 2.07 3.41 5.51 DISTALL END of the results output