####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS174_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS174_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 575 - 605 4.99 20.27 LONGEST_CONTINUOUS_SEGMENT: 31 576 - 606 4.83 21.05 LCS_AVERAGE: 52.39 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 566 - 582 1.75 17.50 LONGEST_CONTINUOUS_SEGMENT: 17 585 - 601 1.85 21.54 LCS_AVERAGE: 24.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 569 - 580 0.98 17.30 LONGEST_CONTINUOUS_SEGMENT: 12 570 - 581 0.97 16.71 LONGEST_CONTINUOUS_SEGMENT: 12 588 - 599 1.00 21.90 LONGEST_CONTINUOUS_SEGMENT: 12 589 - 600 0.95 22.25 LCS_AVERAGE: 16.10 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 8 11 26 5 8 8 8 10 10 11 11 13 13 15 16 21 24 27 31 34 36 38 39 LCS_GDT S 555 S 555 8 11 28 5 8 8 9 10 10 12 14 15 19 21 26 29 31 33 35 36 37 38 39 LCS_GDT I 556 I 556 8 11 28 6 8 8 9 10 10 13 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT L 557 L 557 8 11 28 6 8 8 9 10 10 11 11 13 19 22 26 29 31 33 35 36 37 38 39 LCS_GDT D 558 D 558 8 11 28 6 8 8 9 10 10 11 11 15 18 20 22 25 26 32 35 36 37 38 39 LCS_GDT T 559 T 559 8 11 28 6 8 8 9 10 10 11 12 15 18 21 26 29 31 33 35 36 37 38 39 LCS_GDT L 560 L 560 8 11 28 6 8 8 9 10 10 13 16 18 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT E 561 E 561 8 11 28 6 8 8 9 10 10 11 11 15 18 20 22 25 26 31 34 36 37 38 39 LCS_GDT D 562 D 562 8 11 28 4 7 8 9 10 10 11 11 11 12 15 16 20 22 24 28 32 33 35 39 LCS_GDT L 563 L 563 8 11 28 4 7 8 9 10 10 13 15 17 19 22 26 29 31 33 35 36 37 38 39 LCS_GDT D 564 D 564 3 11 28 3 3 4 5 7 10 13 16 18 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT Y 565 Y 565 3 5 28 3 3 4 5 7 10 15 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT D 566 D 566 9 17 28 4 7 10 12 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT I 567 I 567 10 17 28 4 7 10 12 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT H 568 H 568 11 17 28 4 8 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT A 569 A 569 12 17 28 4 8 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT I 570 I 570 12 17 28 5 10 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT M 571 M 571 12 17 28 4 8 12 14 15 17 17 17 18 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT D 572 D 572 12 17 28 5 10 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT I 573 I 573 12 17 28 5 10 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT L 574 L 574 12 17 28 5 10 12 14 15 17 17 17 18 21 23 26 28 31 33 35 36 37 38 39 LCS_GDT N 575 N 575 12 17 31 5 10 12 14 15 17 17 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT E 576 E 576 12 17 31 5 10 12 14 15 17 17 17 20 21 24 26 29 31 33 35 36 37 38 39 LCS_GDT R 577 R 577 12 17 31 5 10 12 14 15 17 17 19 21 24 24 26 29 31 33 35 36 37 38 39 LCS_GDT I 578 I 578 12 17 31 5 10 12 14 15 17 17 20 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT S 579 S 579 12 17 31 3 10 12 14 15 17 18 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT N 580 N 580 12 17 31 5 10 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT S 581 S 581 12 17 31 3 7 12 13 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT K 582 K 582 11 17 31 3 5 12 14 15 17 17 19 20 22 23 26 29 31 33 35 36 37 38 39 LCS_GDT L 583 L 583 4 5 31 3 5 6 7 8 9 11 17 20 21 23 26 29 31 33 35 36 37 38 39 LCS_GDT V 584 V 584 4 10 31 3 5 6 7 8 10 15 17 19 21 22 26 28 31 33 35 36 37 38 39 LCS_GDT N 585 N 585 9 17 31 5 9 9 13 15 18 19 21 23 24 25 26 27 29 33 34 36 37 38 39 LCS_GDT D 586 D 586 9 17 31 5 9 10 13 15 18 19 21 23 24 25 26 27 31 33 35 36 37 38 39 LCS_GDT K 587 K 587 11 17 31 5 9 12 14 15 18 19 21 23 24 25 26 28 31 33 35 36 37 38 39 LCS_GDT Q 588 Q 588 12 17 31 5 9 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT K 589 K 589 12 17 31 5 9 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT K 590 K 590 12 17 31 5 9 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT H 591 H 591 12 17 31 5 9 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 LCS_GDT I 592 I 592 12 17 31 3 9 12 14 15 18 19 21 23 24 25 26 27 31 32 35 36 37 38 39 LCS_GDT L 593 L 593 12 17 31 5 9 12 14 15 18 19 21 23 24 25 26 27 27 32 34 35 37 38 39 LCS_GDT G 594 G 594 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 30 33 36 38 39 LCS_GDT E 595 E 595 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 33 34 38 39 LCS_GDT L 596 L 596 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT Y 597 Y 597 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT L 598 L 598 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT F 599 F 599 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT L 600 L 600 12 17 31 7 9 12 14 15 18 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT N 601 N 601 3 17 31 3 5 5 5 14 16 18 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT D 602 D 602 4 6 31 3 4 4 5 5 14 18 20 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT N 603 N 603 4 6 31 3 5 5 8 15 16 19 21 23 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT G 604 G 604 4 6 31 3 5 5 5 5 7 13 18 21 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT Y 605 Y 605 4 6 31 3 5 5 5 5 8 15 18 21 24 25 26 27 27 28 28 29 30 31 32 LCS_GDT L 606 L 606 4 6 31 3 5 5 5 5 6 7 10 12 18 23 26 27 27 28 28 29 30 31 32 LCS_GDT K 607 K 607 3 5 30 3 3 4 4 5 6 6 8 8 9 9 10 12 15 21 24 27 28 28 30 LCS_GDT S 608 S 608 3 5 24 3 3 3 4 5 6 6 8 8 9 9 10 11 13 14 18 22 24 27 28 LCS_GDT I 609 I 609 0 4 11 0 0 3 4 4 4 5 6 8 9 9 10 10 11 13 15 17 23 24 27 LCS_AVERAGE LCS_A: 30.94 ( 16.10 24.33 52.39 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 12 14 15 18 19 21 23 24 25 26 29 31 33 35 36 37 38 39 GDT PERCENT_AT 12.50 17.86 21.43 25.00 26.79 32.14 33.93 37.50 41.07 42.86 44.64 46.43 51.79 55.36 58.93 62.50 64.29 66.07 67.86 69.64 GDT RMS_LOCAL 0.27 0.75 0.95 1.13 1.35 1.89 2.00 2.33 2.63 2.88 3.04 3.33 4.72 4.87 5.17 5.41 5.52 5.64 5.80 5.96 GDT RMS_ALL_AT 23.78 16.70 16.89 21.90 17.17 21.51 21.51 21.23 21.08 20.63 21.48 21.78 20.98 20.75 21.68 21.34 21.45 21.49 21.21 21.27 # Checking swapping # possible swapping detected: D 562 D 562 # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 572 D 572 # possible swapping detected: E 576 E 576 # possible swapping detected: Y 605 Y 605 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 34.163 0 0.105 0.850 34.538 0.000 0.000 LGA S 555 S 555 34.171 0 0.092 0.140 34.715 0.000 0.000 LGA I 556 I 556 34.732 0 0.048 0.599 35.775 0.000 0.000 LGA L 557 L 557 35.278 0 0.140 1.260 36.493 0.000 0.000 LGA D 558 D 558 35.873 0 0.059 0.245 36.723 0.000 0.000 LGA T 559 T 559 36.884 0 0.081 0.125 37.893 0.000 0.000 LGA L 560 L 560 37.516 0 0.178 0.178 38.978 0.000 0.000 LGA E 561 E 561 38.095 0 0.112 0.278 39.897 0.000 0.000 LGA D 562 D 562 40.935 0 0.448 0.851 42.899 0.000 0.000 LGA L 563 L 563 42.625 0 0.599 1.280 46.421 0.000 0.000 LGA D 564 D 564 43.493 0 0.369 0.903 48.816 0.000 0.000 LGA Y 565 Y 565 36.855 0 0.631 0.530 39.122 0.000 0.000 LGA D 566 D 566 35.546 0 0.461 0.694 37.701 0.000 0.000 LGA I 567 I 567 33.920 0 0.051 0.188 39.324 0.000 0.000 LGA H 568 H 568 31.157 0 0.162 0.973 35.586 0.000 0.000 LGA A 569 A 569 26.529 0 0.156 0.182 28.632 0.000 0.000 LGA I 570 I 570 23.537 0 0.045 0.578 26.686 0.000 0.000 LGA M 571 M 571 22.508 0 0.101 0.671 28.561 0.000 0.000 LGA D 572 D 572 19.428 0 0.136 0.187 22.592 0.000 0.000 LGA I 573 I 573 16.409 0 0.162 0.552 18.930 0.000 0.000 LGA L 574 L 574 13.847 0 0.166 1.317 15.462 0.000 0.000 LGA N 575 N 575 12.710 0 0.112 0.553 14.198 0.119 0.060 LGA E 576 E 576 9.757 0 0.173 1.045 12.233 4.643 2.063 LGA R 577 R 577 6.884 0 0.077 1.431 11.257 23.214 9.827 LGA I 578 I 578 4.760 0 0.080 0.125 9.435 36.190 22.440 LGA S 579 S 579 4.272 0 0.053 0.057 7.057 47.619 37.778 LGA N 580 N 580 3.068 0 0.198 0.344 7.103 46.786 35.774 LGA S 581 S 581 3.144 0 0.678 0.826 3.990 50.357 52.698 LGA K 582 K 582 7.917 0 0.222 0.933 12.512 7.262 3.280 LGA L 583 L 583 11.623 0 0.271 0.295 16.641 0.357 0.179 LGA V 584 V 584 8.276 0 0.665 1.446 10.557 12.619 7.415 LGA N 585 N 585 2.269 0 0.498 1.149 6.392 62.619 49.167 LGA D 586 D 586 1.297 0 0.144 0.264 2.057 83.810 78.393 LGA K 587 K 587 0.376 0 0.167 1.626 6.645 90.833 72.857 LGA Q 588 Q 588 1.378 0 0.102 0.280 3.334 81.548 73.280 LGA K 589 K 589 1.252 0 0.088 1.271 7.415 79.286 60.529 LGA K 590 K 590 1.230 0 0.174 0.964 3.806 85.952 72.910 LGA H 591 H 591 0.958 0 0.049 0.085 1.246 83.690 87.762 LGA I 592 I 592 1.637 0 0.054 0.614 3.251 75.000 65.179 LGA L 593 L 593 2.400 0 0.062 0.270 5.646 68.810 49.940 LGA G 594 G 594 1.505 0 0.159 0.159 1.664 79.405 79.405 LGA E 595 E 595 0.323 0 0.164 0.430 2.319 95.238 85.767 LGA L 596 L 596 1.394 0 0.039 0.154 3.672 81.548 67.679 LGA Y 597 Y 597 0.444 0 0.064 1.057 6.658 90.714 62.857 LGA L 598 L 598 2.209 0 0.139 1.427 6.903 61.190 45.357 LGA F 599 F 599 3.316 0 0.483 0.532 4.476 57.262 46.710 LGA L 600 L 600 2.739 0 0.107 0.844 6.889 69.762 47.738 LGA N 601 N 601 3.925 0 0.361 0.590 9.386 42.500 24.048 LGA D 602 D 602 5.108 0 0.271 1.223 10.924 31.786 17.381 LGA N 603 N 603 3.438 0 0.156 1.009 5.959 35.238 51.190 LGA G 604 G 604 6.949 0 0.645 0.645 9.248 10.833 10.833 LGA Y 605 Y 605 6.917 0 0.158 1.396 9.844 7.500 42.976 LGA L 606 L 606 10.637 0 0.157 1.184 12.596 0.714 2.619 LGA K 607 K 607 16.948 0 0.581 1.466 21.882 0.000 0.000 LGA S 608 S 608 21.603 0 0.609 0.602 24.029 0.000 0.000 LGA I 609 I 609 22.783 0 0.375 0.815 24.849 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 12.974 12.878 13.563 28.650 24.395 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 21 2.33 35.714 32.900 0.864 LGA_LOCAL RMSD: 2.329 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.229 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 12.974 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.838448 * X + -0.531502 * Y + 0.120458 * Z + -20.548237 Y_new = 0.013852 * X + -0.241745 * Y + -0.970241 * Z + 91.321854 Z_new = 0.544805 * X + -0.811828 * Y + 0.210053 * Z + -27.548260 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.125072 -0.576157 -1.317608 [DEG: 179.0535 -33.0113 -75.4934 ] ZXZ: 0.123521 1.359167 2.550538 [DEG: 7.0772 77.8745 146.1351 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS174_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS174_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 21 2.33 32.900 12.97 REMARK ---------------------------------------------------------- MOLECULE T0547TS174_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REMARK PARENT N/A ATOM 4430 N GLN 554 -17.116 104.218 7.237 1.00 0.00 N ATOM 4431 CA GLN 554 -16.878 105.138 8.320 1.00 0.00 C ATOM 4432 CB GLN 554 -17.830 106.334 8.125 1.00 0.00 C ATOM 4433 C GLN 554 -17.250 104.586 9.767 1.00 0.00 C ATOM 4434 O GLN 554 -18.355 104.084 9.988 1.00 0.00 O ATOM 4435 CG GLN 554 -17.553 107.134 6.850 1.00 0.00 C ATOM 4436 CD GLN 554 -16.214 107.840 7.020 1.00 0.00 C ATOM 4437 OE1 GLN 554 -15.878 108.305 8.107 1.00 0.00 O ATOM 4438 NE2 GLN 554 -15.379 107.956 5.953 1.00 0.00 N ATOM 4439 N SER 555 -16.288 104.655 10.678 1.00 0.00 N ATOM 4440 CA SER 555 -16.557 104.228 12.021 1.00 0.00 C ATOM 4441 CB SER 555 -15.194 103.801 12.578 1.00 0.00 C ATOM 4442 C SER 555 -17.158 105.371 12.870 1.00 0.00 C ATOM 4443 O SER 555 -17.332 106.512 12.441 1.00 0.00 O ATOM 4444 OG SER 555 -14.343 104.930 12.706 1.00 0.00 O ATOM 4445 N ILE 556 -17.621 104.959 14.047 1.00 0.00 N ATOM 4446 CA ILE 556 -18.291 105.801 15.068 1.00 0.00 C ATOM 4447 CB ILE 556 -18.379 105.025 16.366 1.00 0.00 C ATOM 4448 C ILE 556 -17.496 106.986 15.430 1.00 0.00 C ATOM 4449 O ILE 556 -18.031 108.083 15.591 1.00 0.00 O ATOM 4450 CG1 ILE 556 -19.280 103.782 16.276 1.00 0.00 C ATOM 4451 CG2 ILE 556 -18.945 105.848 17.536 1.00 0.00 C ATOM 4452 CD1 ILE 556 -20.747 104.110 16.007 1.00 0.00 C ATOM 4453 N LEU 557 -16.178 106.810 15.491 1.00 0.00 N ATOM 4454 CA LEU 557 -15.272 107.961 15.786 1.00 0.00 C ATOM 4455 CB LEU 557 -13.806 107.543 15.947 1.00 0.00 C ATOM 4456 C LEU 557 -15.246 109.012 14.756 1.00 0.00 C ATOM 4457 O LEU 557 -14.976 110.141 15.145 1.00 0.00 O ATOM 4458 CG LEU 557 -13.546 106.697 17.196 1.00 0.00 C ATOM 4459 CD1 LEU 557 -12.130 106.136 17.312 1.00 0.00 C ATOM 4460 CD2 LEU 557 -13.749 107.426 18.523 1.00 0.00 C ATOM 4461 N ASP 558 -15.524 108.717 13.492 1.00 0.00 N ATOM 4462 CA ASP 558 -15.697 109.607 12.388 1.00 0.00 C ATOM 4463 CB ASP 558 -15.656 108.888 11.046 1.00 0.00 C ATOM 4464 C ASP 558 -16.944 110.595 12.552 1.00 0.00 C ATOM 4465 O ASP 558 -16.953 111.776 12.244 1.00 0.00 O ATOM 4466 CG ASP 558 -14.215 108.475 10.778 1.00 0.00 C ATOM 4467 OD1 ASP 558 -13.314 108.970 11.505 1.00 0.00 O ATOM 4468 OD2 ASP 558 -13.999 107.660 9.842 1.00 0.00 O ATOM 4469 N THR 559 -18.031 109.945 12.970 1.00 0.00 N ATOM 4470 CA THR 559 -19.230 110.735 13.138 1.00 0.00 C ATOM 4471 CB THR 559 -20.423 109.802 13.433 1.00 0.00 C ATOM 4472 C THR 559 -18.951 111.759 14.294 1.00 0.00 C ATOM 4473 O THR 559 -19.094 112.973 14.198 1.00 0.00 O ATOM 4474 OG1 THR 559 -20.635 108.920 12.340 1.00 0.00 O ATOM 4475 CG2 THR 559 -21.688 110.648 13.657 1.00 0.00 C ATOM 4476 N LEU 560 -18.537 111.183 15.421 1.00 0.00 N ATOM 4477 CA LEU 560 -18.292 112.075 16.539 1.00 0.00 C ATOM 4478 CB LEU 560 -17.988 111.228 17.768 1.00 0.00 C ATOM 4479 C LEU 560 -17.128 113.061 16.336 1.00 0.00 C ATOM 4480 O LEU 560 -16.905 113.965 17.152 1.00 0.00 O ATOM 4481 CG LEU 560 -19.175 110.384 18.236 1.00 0.00 C ATOM 4482 CD1 LEU 560 -18.875 109.435 19.396 1.00 0.00 C ATOM 4483 CD2 LEU 560 -20.380 111.182 18.733 1.00 0.00 C ATOM 4484 N GLU 561 -16.357 112.810 15.293 1.00 0.00 N ATOM 4485 CA GLU 561 -15.118 113.643 15.131 1.00 0.00 C ATOM 4486 CB GLU 561 -14.006 112.802 14.459 1.00 0.00 C ATOM 4487 C GLU 561 -15.331 115.089 14.976 1.00 0.00 C ATOM 4488 O GLU 561 -14.479 115.915 15.299 1.00 0.00 O ATOM 4489 CG GLU 561 -12.645 113.500 14.434 1.00 0.00 C ATOM 4490 CD GLU 561 -11.621 112.514 13.890 1.00 0.00 C ATOM 4491 OE1 GLU 561 -12.032 111.390 13.498 1.00 0.00 O ATOM 4492 OE2 GLU 561 -10.413 112.872 13.858 1.00 0.00 O ATOM 4493 N ASP 562 -16.539 115.432 14.535 1.00 0.00 N ATOM 4494 CA ASP 562 -16.876 116.911 14.362 1.00 0.00 C ATOM 4495 CB ASP 562 -18.176 117.055 13.562 1.00 0.00 C ATOM 4496 C ASP 562 -17.687 117.158 15.697 1.00 0.00 C ATOM 4497 O ASP 562 -18.890 117.426 15.636 1.00 0.00 O ATOM 4498 CG ASP 562 -18.325 118.517 13.165 1.00 0.00 C ATOM 4499 OD1 ASP 562 -17.350 119.288 13.373 1.00 0.00 O ATOM 4500 OD2 ASP 562 -19.415 118.881 12.650 1.00 0.00 O ATOM 4501 N LEU 563 -17.031 117.021 16.849 1.00 0.00 N ATOM 4502 CA LEU 563 -17.765 117.141 18.061 1.00 0.00 C ATOM 4503 CB LEU 563 -16.867 116.632 19.191 1.00 0.00 C ATOM 4504 C LEU 563 -18.093 118.645 18.270 1.00 0.00 C ATOM 4505 O LEU 563 -17.305 119.553 18.003 1.00 0.00 O ATOM 4506 CG LEU 563 -17.569 116.574 20.549 1.00 0.00 C ATOM 4507 CD1 LEU 563 -18.713 115.565 20.642 1.00 0.00 C ATOM 4508 CD2 LEU 563 -16.670 116.200 21.726 1.00 0.00 C ATOM 4509 N ASP 564 -19.341 118.863 18.669 1.00 0.00 N ATOM 4510 CA ASP 564 -19.781 120.272 18.856 1.00 0.00 C ATOM 4511 CB ASP 564 -18.737 121.095 19.624 1.00 0.00 C ATOM 4512 C ASP 564 -20.584 120.708 17.627 1.00 0.00 C ATOM 4513 O ASP 564 -21.514 121.491 17.809 1.00 0.00 O ATOM 4514 CG ASP 564 -18.763 120.648 21.079 1.00 0.00 C ATOM 4515 OD1 ASP 564 -19.731 119.935 21.461 1.00 0.00 O ATOM 4516 OD2 ASP 564 -17.818 121.012 21.827 1.00 0.00 O ATOM 4517 N TYR 565 -20.244 120.296 16.413 1.00 0.00 N ATOM 4518 CA TYR 565 -20.954 120.747 15.271 1.00 0.00 C ATOM 4519 CB TYR 565 -20.080 121.646 14.391 1.00 0.00 C ATOM 4520 C TYR 565 -21.930 119.562 14.893 1.00 0.00 C ATOM 4521 O TYR 565 -23.055 119.891 14.543 1.00 0.00 O ATOM 4522 CG TYR 565 -19.663 122.814 15.218 1.00 0.00 C ATOM 4523 CD1 TYR 565 -18.385 122.840 15.791 1.00 0.00 C ATOM 4524 CD2 TYR 565 -20.525 123.910 15.437 1.00 0.00 C ATOM 4525 CE1 TYR 565 -17.953 123.927 16.576 1.00 0.00 C ATOM 4526 CE2 TYR 565 -20.102 125.023 16.234 1.00 0.00 C ATOM 4527 CZ TYR 565 -18.809 125.012 16.795 1.00 0.00 C ATOM 4528 OH TYR 565 -18.359 126.059 17.571 1.00 0.00 O ATOM 4529 N ASP 566 -21.523 118.295 14.917 1.00 0.00 N ATOM 4530 CA ASP 566 -22.470 117.330 14.587 1.00 0.00 C ATOM 4531 CB ASP 566 -23.035 116.651 15.837 1.00 0.00 C ATOM 4532 C ASP 566 -22.824 117.305 13.053 1.00 0.00 C ATOM 4533 O ASP 566 -22.080 116.891 12.169 1.00 0.00 O ATOM 4534 CG ASP 566 -23.874 115.463 15.389 1.00 0.00 C ATOM 4535 OD1 ASP 566 -23.946 115.222 14.154 1.00 0.00 O ATOM 4536 OD2 ASP 566 -24.453 114.779 16.276 1.00 0.00 O ATOM 4537 N ILE 567 -24.033 117.785 12.803 1.00 0.00 N ATOM 4538 CA ILE 567 -24.485 117.773 11.392 1.00 0.00 C ATOM 4539 CB ILE 567 -25.968 117.816 11.244 1.00 0.00 C ATOM 4540 C ILE 567 -23.557 118.385 10.385 1.00 0.00 C ATOM 4541 O ILE 567 -23.289 117.894 9.289 1.00 0.00 O ATOM 4542 CG1 ILE 567 -26.670 116.540 11.737 1.00 0.00 C ATOM 4543 CG2 ILE 567 -26.434 117.996 9.790 1.00 0.00 C ATOM 4544 CD1 ILE 567 -28.187 116.682 11.845 1.00 0.00 C ATOM 4545 N HIS 568 -23.066 119.555 10.791 1.00 0.00 N ATOM 4546 CA HIS 568 -22.215 120.338 9.741 1.00 0.00 C ATOM 4547 CB HIS 568 -21.738 121.658 10.351 1.00 0.00 C ATOM 4548 C HIS 568 -20.951 119.613 9.383 1.00 0.00 C ATOM 4549 O HIS 568 -20.355 119.897 8.331 1.00 0.00 O ATOM 4550 CG HIS 568 -22.850 122.642 10.565 1.00 0.00 C ATOM 4551 ND1 HIS 568 -23.545 123.255 9.544 1.00 0.00 N ATOM 4552 CD2 HIS 568 -23.399 123.124 11.704 1.00 0.00 C ATOM 4553 CE1 HIS 568 -24.453 124.051 10.021 1.00 0.00 C ATOM 4554 NE2 HIS 568 -24.392 123.998 11.338 1.00 0.00 N ATOM 4555 N ALA 569 -20.576 118.626 10.196 1.00 0.00 N ATOM 4556 CA ALA 569 -19.398 117.799 9.985 1.00 0.00 C ATOM 4557 CB ALA 569 -19.076 116.906 11.181 1.00 0.00 C ATOM 4558 C ALA 569 -19.578 116.868 8.795 1.00 0.00 C ATOM 4559 O ALA 569 -18.589 116.421 8.190 1.00 0.00 O ATOM 4560 N ILE 570 -20.836 116.623 8.432 1.00 0.00 N ATOM 4561 CA ILE 570 -21.184 115.764 7.319 1.00 0.00 C ATOM 4562 CB ILE 570 -22.696 115.529 7.151 1.00 0.00 C ATOM 4563 C ILE 570 -20.651 116.428 5.962 1.00 0.00 C ATOM 4564 O ILE 570 -20.175 115.776 5.036 1.00 0.00 O ATOM 4565 CG1 ILE 570 -23.336 114.781 8.332 1.00 0.00 C ATOM 4566 CG2 ILE 570 -23.052 114.697 5.907 1.00 0.00 C ATOM 4567 CD1 ILE 570 -22.763 113.381 8.548 1.00 0.00 C ATOM 4568 N MET 571 -20.786 117.747 5.921 1.00 0.00 N ATOM 4569 CA MET 571 -20.377 118.470 4.775 1.00 0.00 C ATOM 4570 CB MET 571 -21.017 119.863 4.752 1.00 0.00 C ATOM 4571 C MET 571 -18.784 118.470 4.689 1.00 0.00 C ATOM 4572 O MET 571 -18.075 118.023 3.783 1.00 0.00 O ATOM 4573 CG MET 571 -20.592 120.710 3.551 1.00 0.00 C ATOM 4574 SD MET 571 -21.359 122.356 3.480 1.00 0.00 S ATOM 4575 CE MET 571 -20.374 123.049 4.839 1.00 0.00 C ATOM 4576 N ASP 572 -18.280 119.033 5.778 1.00 0.00 N ATOM 4577 CA ASP 572 -16.775 119.164 5.759 1.00 0.00 C ATOM 4578 CB ASP 572 -16.409 120.334 6.678 1.00 0.00 C ATOM 4579 C ASP 572 -16.034 117.829 5.759 1.00 0.00 C ATOM 4580 O ASP 572 -15.000 117.574 5.142 1.00 0.00 O ATOM 4581 CG ASP 572 -16.801 121.625 5.973 1.00 0.00 C ATOM 4582 OD1 ASP 572 -17.090 121.567 4.749 1.00 0.00 O ATOM 4583 OD2 ASP 572 -16.818 122.688 6.652 1.00 0.00 O ATOM 4584 N ILE 573 -16.619 116.956 6.579 1.00 0.00 N ATOM 4585 CA ILE 573 -15.829 115.628 6.775 1.00 0.00 C ATOM 4586 CB ILE 573 -16.581 114.789 7.845 1.00 0.00 C ATOM 4587 C ILE 573 -15.813 114.782 5.484 1.00 0.00 C ATOM 4588 O ILE 573 -14.988 113.880 5.351 1.00 0.00 O ATOM 4589 CG1 ILE 573 -15.719 113.679 8.471 1.00 0.00 C ATOM 4590 CG2 ILE 573 -17.825 114.070 7.297 1.00 0.00 C ATOM 4591 CD1 ILE 573 -14.538 114.210 9.282 1.00 0.00 C ATOM 4592 N LEU 574 -16.709 115.087 4.554 1.00 0.00 N ATOM 4593 CA LEU 574 -16.819 114.371 3.331 1.00 0.00 C ATOM 4594 CB LEU 574 -18.261 114.295 2.805 1.00 0.00 C ATOM 4595 C LEU 574 -15.498 114.887 2.474 1.00 0.00 C ATOM 4596 O LEU 574 -14.462 114.312 2.125 1.00 0.00 O ATOM 4597 CG LEU 574 -18.394 113.502 1.504 1.00 0.00 C ATOM 4598 CD1 LEU 574 -18.045 112.018 1.613 1.00 0.00 C ATOM 4599 CD2 LEU 574 -19.795 113.492 0.894 1.00 0.00 C ATOM 4600 N ASN 575 -15.762 116.144 2.147 1.00 0.00 N ATOM 4601 CA ASN 575 -14.648 116.659 1.210 1.00 0.00 C ATOM 4602 CB ASN 575 -15.261 117.823 0.426 1.00 0.00 C ATOM 4603 C ASN 575 -13.282 116.807 1.795 1.00 0.00 C ATOM 4604 O ASN 575 -12.220 116.695 1.184 1.00 0.00 O ATOM 4605 CG ASN 575 -14.272 118.232 -0.656 1.00 0.00 C ATOM 4606 OD1 ASN 575 -13.957 117.453 -1.555 1.00 0.00 O ATOM 4607 ND2 ASN 575 -13.728 119.478 -0.631 1.00 0.00 N ATOM 4608 N GLU 576 -13.340 117.110 3.092 1.00 0.00 N ATOM 4609 CA GLU 576 -11.941 117.443 3.761 1.00 0.00 C ATOM 4610 CB GLU 576 -12.089 118.103 5.139 1.00 0.00 C ATOM 4611 C GLU 576 -11.178 116.167 3.972 1.00 0.00 C ATOM 4612 O GLU 576 -9.949 116.206 4.152 1.00 0.00 O ATOM 4613 CG GLU 576 -12.705 119.503 5.083 1.00 0.00 C ATOM 4614 CD GLU 576 -12.861 120.007 6.510 1.00 0.00 C ATOM 4615 OE1 GLU 576 -12.509 119.242 7.449 1.00 0.00 O ATOM 4616 OE2 GLU 576 -13.332 121.162 6.681 1.00 0.00 O ATOM 4617 N ARG 577 -11.872 115.033 3.871 1.00 0.00 N ATOM 4618 CA ARG 577 -11.288 113.709 4.017 1.00 0.00 C ATOM 4619 CB ARG 577 -12.383 112.641 4.096 1.00 0.00 C ATOM 4620 C ARG 577 -10.390 113.370 2.802 1.00 0.00 C ATOM 4621 O ARG 577 -9.535 112.495 2.931 1.00 0.00 O ATOM 4622 CG ARG 577 -11.849 111.243 4.417 1.00 0.00 C ATOM 4623 CD ARG 577 -12.949 110.212 4.677 1.00 0.00 C ATOM 4624 NE ARG 577 -13.652 109.973 3.385 1.00 0.00 N ATOM 4625 CZ ARG 577 -14.741 109.151 3.343 1.00 0.00 C ATOM 4626 NH1 ARG 577 -14.963 108.689 4.609 1.00 0.00 N ATOM 4627 NH2 ARG 577 -15.183 109.111 2.053 1.00 0.00 N ATOM 4628 N ILE 578 -10.565 114.051 1.678 1.00 0.00 N ATOM 4629 CA ILE 578 -9.836 113.855 0.508 1.00 0.00 C ATOM 4630 CB ILE 578 -10.591 114.444 -0.700 1.00 0.00 C ATOM 4631 C ILE 578 -8.347 114.493 0.622 1.00 0.00 C ATOM 4632 O ILE 578 -7.255 113.976 0.364 1.00 0.00 O ATOM 4633 CG1 ILE 578 -11.918 113.726 -1.003 1.00 0.00 C ATOM 4634 CG2 ILE 578 -9.792 114.383 -2.012 1.00 0.00 C ATOM 4635 CD1 ILE 578 -12.779 114.449 -2.038 1.00 0.00 C ATOM 4636 N SER 579 -8.463 115.742 1.050 1.00 0.00 N ATOM 4637 CA SER 579 -7.129 116.460 1.089 1.00 0.00 C ATOM 4638 CB SER 579 -7.333 117.983 1.087 1.00 0.00 C ATOM 4639 C SER 579 -6.334 116.087 2.324 1.00 0.00 C ATOM 4640 O SER 579 -5.126 115.876 2.348 1.00 0.00 O ATOM 4641 OG SER 579 -7.939 118.393 -0.130 1.00 0.00 O ATOM 4642 N ASN 580 -7.101 115.994 3.410 1.00 0.00 N ATOM 4643 CA ASN 580 -6.322 115.684 4.720 1.00 0.00 C ATOM 4644 CB ASN 580 -7.163 116.258 5.856 1.00 0.00 C ATOM 4645 C ASN 580 -5.666 114.272 4.643 1.00 0.00 C ATOM 4646 O ASN 580 -4.539 114.023 5.066 1.00 0.00 O ATOM 4647 CG ASN 580 -7.040 117.774 5.811 1.00 0.00 C ATOM 4648 OD1 ASN 580 -6.105 118.317 5.225 1.00 0.00 O ATOM 4649 ND2 ASN 580 -7.979 118.541 6.428 1.00 0.00 N ATOM 4650 N SER 581 -6.469 113.339 4.131 1.00 0.00 N ATOM 4651 CA SER 581 -5.975 111.947 4.121 1.00 0.00 C ATOM 4652 CB SER 581 -7.105 111.078 3.590 1.00 0.00 C ATOM 4653 C SER 581 -4.655 111.685 3.377 1.00 0.00 C ATOM 4654 O SER 581 -3.984 110.682 3.610 1.00 0.00 O ATOM 4655 OG SER 581 -7.363 111.391 2.229 1.00 0.00 O ATOM 4656 N LYS 582 -4.296 112.608 2.495 1.00 0.00 N ATOM 4657 CA LYS 582 -3.089 112.464 1.704 1.00 0.00 C ATOM 4658 CB LYS 582 -3.226 113.171 0.365 1.00 0.00 C ATOM 4659 C LYS 582 -1.771 113.056 2.359 1.00 0.00 C ATOM 4660 O LYS 582 -0.615 112.846 1.962 1.00 0.00 O ATOM 4661 CG LYS 582 -4.292 112.555 -0.544 1.00 0.00 C ATOM 4662 CD LYS 582 -4.420 113.255 -1.899 1.00 0.00 C ATOM 4663 CE LYS 582 -5.456 112.613 -2.825 1.00 0.00 C ATOM 4664 NZ LYS 582 -5.499 113.336 -4.116 1.00 0.00 N ATOM 4665 N LEU 583 -2.041 113.947 3.316 1.00 0.00 N ATOM 4666 CA LEU 583 -0.813 114.541 3.927 1.00 0.00 C ATOM 4667 CB LEU 583 -0.711 116.063 3.880 1.00 0.00 C ATOM 4668 C LEU 583 -0.667 113.969 5.287 1.00 0.00 C ATOM 4669 O LEU 583 0.400 113.434 5.576 1.00 0.00 O ATOM 4670 CG LEU 583 -0.637 116.626 2.459 1.00 0.00 C ATOM 4671 CD1 LEU 583 -0.608 118.150 2.368 1.00 0.00 C ATOM 4672 CD2 LEU 583 0.594 116.200 1.658 1.00 0.00 C ATOM 4673 N VAL 584 -1.694 114.010 6.122 1.00 0.00 N ATOM 4674 CA VAL 584 -1.677 113.423 7.456 1.00 0.00 C ATOM 4675 CB VAL 584 -2.916 114.000 8.195 1.00 0.00 C ATOM 4676 C VAL 584 -1.455 112.014 7.597 1.00 0.00 C ATOM 4677 O VAL 584 -0.855 111.680 8.610 1.00 0.00 O ATOM 4678 CG1 VAL 584 -3.174 113.346 9.554 1.00 0.00 C ATOM 4679 CG2 VAL 584 -2.811 115.498 8.485 1.00 0.00 C ATOM 4680 N ASN 585 -1.803 111.165 6.630 1.00 0.00 N ATOM 4681 CA ASN 585 -1.643 109.732 6.544 1.00 0.00 C ATOM 4682 CB ASN 585 -3.049 109.136 6.769 1.00 0.00 C ATOM 4683 C ASN 585 -0.847 109.220 5.244 1.00 0.00 C ATOM 4684 O ASN 585 -1.476 108.446 4.502 1.00 0.00 O ATOM 4685 CG ASN 585 -3.518 109.548 8.157 1.00 0.00 C ATOM 4686 OD1 ASN 585 -2.980 109.096 9.167 1.00 0.00 O ATOM 4687 ND2 ASN 585 -4.547 110.428 8.284 1.00 0.00 N ATOM 4688 N ASP 586 0.411 109.570 5.018 1.00 0.00 N ATOM 4689 CA ASP 586 1.030 109.144 3.909 1.00 0.00 C ATOM 4690 CB ASP 586 2.077 110.246 3.973 1.00 0.00 C ATOM 4691 C ASP 586 1.113 107.617 3.555 1.00 0.00 C ATOM 4692 O ASP 586 1.083 107.118 2.435 1.00 0.00 O ATOM 4693 CG ASP 586 2.931 110.157 2.716 1.00 0.00 C ATOM 4694 OD1 ASP 586 2.361 110.310 1.602 1.00 0.00 O ATOM 4695 OD2 ASP 586 4.163 109.935 2.852 1.00 0.00 O ATOM 4696 N LYS 587 1.281 106.891 4.660 1.00 0.00 N ATOM 4697 CA LYS 587 1.476 105.394 4.339 1.00 0.00 C ATOM 4698 CB LYS 587 2.180 104.670 5.516 1.00 0.00 C ATOM 4699 C LYS 587 0.104 104.636 4.021 1.00 0.00 C ATOM 4700 O LYS 587 -0.043 103.599 3.383 1.00 0.00 O ATOM 4701 CG LYS 587 3.635 105.098 5.713 1.00 0.00 C ATOM 4702 CD LYS 587 4.339 104.369 6.860 1.00 0.00 C ATOM 4703 CE LYS 587 5.795 104.796 7.054 1.00 0.00 C ATOM 4704 NZ LYS 587 6.400 104.035 8.170 1.00 0.00 N ATOM 4705 N GLN 588 -0.905 105.245 4.644 1.00 0.00 N ATOM 4706 CA GLN 588 -2.203 104.453 4.468 1.00 0.00 C ATOM 4707 CB GLN 588 -3.119 104.775 5.704 1.00 0.00 C ATOM 4708 C GLN 588 -2.810 104.898 3.037 1.00 0.00 C ATOM 4709 O GLN 588 -3.377 104.228 2.180 1.00 0.00 O ATOM 4710 CG GLN 588 -2.585 104.213 7.023 1.00 0.00 C ATOM 4711 CD GLN 588 -3.531 104.645 8.135 1.00 0.00 C ATOM 4712 OE1 GLN 588 -4.458 105.421 7.913 1.00 0.00 O ATOM 4713 NE2 GLN 588 -3.348 104.164 9.393 1.00 0.00 N ATOM 4714 N LYS 589 -2.721 106.226 2.968 1.00 0.00 N ATOM 4715 CA LYS 589 -3.488 106.681 1.672 1.00 0.00 C ATOM 4716 CB LYS 589 -3.856 108.182 1.782 1.00 0.00 C ATOM 4717 C LYS 589 -2.712 106.425 0.393 1.00 0.00 C ATOM 4718 O LYS 589 -3.182 106.223 -0.727 1.00 0.00 O ATOM 4719 CG LYS 589 -4.671 108.699 0.595 1.00 0.00 C ATOM 4720 CD LYS 589 -6.080 108.109 0.515 1.00 0.00 C ATOM 4721 CE LYS 589 -6.917 108.675 -0.633 1.00 0.00 C ATOM 4722 NZ LYS 589 -8.274 108.085 -0.609 1.00 0.00 N ATOM 4723 N LYS 590 -1.402 106.504 0.621 1.00 0.00 N ATOM 4724 CA LYS 590 -0.522 106.440 -0.692 1.00 0.00 C ATOM 4725 CB LYS 590 0.876 106.931 -0.356 1.00 0.00 C ATOM 4726 C LYS 590 -0.454 105.001 -1.180 1.00 0.00 C ATOM 4727 O LYS 590 -0.070 104.790 -2.328 1.00 0.00 O ATOM 4728 CG LYS 590 1.750 107.172 -1.587 1.00 0.00 C ATOM 4729 CD LYS 590 3.150 107.692 -1.252 1.00 0.00 C ATOM 4730 CE LYS 590 4.034 107.908 -2.482 1.00 0.00 C ATOM 4731 NZ LYS 590 5.354 108.439 -2.071 1.00 0.00 N ATOM 4732 N HIS 591 -0.862 104.039 -0.363 1.00 0.00 N ATOM 4733 CA HIS 591 -0.868 102.654 -0.676 1.00 0.00 C ATOM 4734 CB HIS 591 -0.772 101.697 0.501 1.00 0.00 C ATOM 4735 C HIS 591 -2.110 102.278 -1.616 1.00 0.00 C ATOM 4736 O HIS 591 -2.058 101.579 -2.632 1.00 0.00 O ATOM 4737 CG HIS 591 -0.780 100.256 0.086 1.00 0.00 C ATOM 4738 ND1 HIS 591 0.270 99.632 -0.557 1.00 0.00 N ATOM 4739 CD2 HIS 591 -1.726 99.297 0.227 1.00 0.00 C ATOM 4740 CE1 HIS 591 -0.011 98.386 -0.791 1.00 0.00 C ATOM 4741 NE2 HIS 591 -1.222 98.145 -0.326 1.00 0.00 N ATOM 4742 N ILE 592 -3.236 102.820 -1.177 1.00 0.00 N ATOM 4743 CA ILE 592 -4.448 102.494 -1.940 1.00 0.00 C ATOM 4744 CB ILE 592 -5.687 102.355 -1.026 1.00 0.00 C ATOM 4745 C ILE 592 -4.506 103.239 -3.283 1.00 0.00 C ATOM 4746 O ILE 592 -4.838 102.763 -4.364 1.00 0.00 O ATOM 4747 CG1 ILE 592 -5.623 101.141 -0.085 1.00 0.00 C ATOM 4748 CG2 ILE 592 -7.006 102.193 -1.801 1.00 0.00 C ATOM 4749 CD1 ILE 592 -6.705 101.148 0.994 1.00 0.00 C ATOM 4750 N LEU 593 -4.165 104.519 -3.137 1.00 0.00 N ATOM 4751 CA LEU 593 -4.319 105.337 -4.459 1.00 0.00 C ATOM 4752 CB LEU 593 -4.498 106.792 -4.052 1.00 0.00 C ATOM 4753 C LEU 593 -3.327 104.898 -5.494 1.00 0.00 C ATOM 4754 O LEU 593 -3.612 104.809 -6.688 1.00 0.00 O ATOM 4755 CG LEU 593 -5.833 107.071 -3.358 1.00 0.00 C ATOM 4756 CD1 LEU 593 -5.977 108.478 -2.779 1.00 0.00 C ATOM 4757 CD2 LEU 593 -7.067 106.926 -4.247 1.00 0.00 C ATOM 4758 N GLY 594 -2.114 104.620 -5.019 1.00 0.00 N ATOM 4759 CA GLY 594 -1.015 104.258 -5.996 1.00 0.00 C ATOM 4760 C GLY 594 -1.251 103.013 -6.733 1.00 0.00 C ATOM 4761 O GLY 594 -0.535 102.847 -7.719 1.00 0.00 O ATOM 4762 N GLU 595 -2.270 102.217 -6.437 1.00 0.00 N ATOM 4763 CA GLU 595 -2.722 101.039 -7.078 1.00 0.00 C ATOM 4764 CB GLU 595 -3.298 100.001 -6.101 1.00 0.00 C ATOM 4765 C GLU 595 -3.596 101.352 -8.321 1.00 0.00 C ATOM 4766 O GLU 595 -3.701 100.555 -9.248 1.00 0.00 O ATOM 4767 CG GLU 595 -2.252 99.408 -5.155 1.00 0.00 C ATOM 4768 CD GLU 595 -2.965 98.459 -4.202 1.00 0.00 C ATOM 4769 OE1 GLU 595 -4.212 98.327 -4.322 1.00 0.00 O ATOM 4770 OE2 GLU 595 -2.272 97.852 -3.342 1.00 0.00 O ATOM 4771 N LEU 596 -4.222 102.528 -8.311 1.00 0.00 N ATOM 4772 CA LEU 596 -5.092 102.852 -9.432 1.00 0.00 C ATOM 4773 CB LEU 596 -6.294 103.633 -8.924 1.00 0.00 C ATOM 4774 C LEU 596 -4.219 103.361 -10.597 1.00 0.00 C ATOM 4775 O LEU 596 -4.424 103.057 -11.768 1.00 0.00 O ATOM 4776 CG LEU 596 -7.315 103.959 -10.015 1.00 0.00 C ATOM 4777 CD1 LEU 596 -7.928 102.744 -10.711 1.00 0.00 C ATOM 4778 CD2 LEU 596 -8.534 104.750 -9.544 1.00 0.00 C ATOM 4779 N TYR 597 -3.220 104.162 -10.228 1.00 0.00 N ATOM 4780 CA TYR 597 -2.376 104.724 -11.323 1.00 0.00 C ATOM 4781 CB TYR 597 -1.413 105.745 -10.695 1.00 0.00 C ATOM 4782 C TYR 597 -1.595 103.678 -12.110 1.00 0.00 C ATOM 4783 O TYR 597 -1.471 103.736 -13.329 1.00 0.00 O ATOM 4784 CG TYR 597 -0.553 106.281 -11.789 1.00 0.00 C ATOM 4785 CD1 TYR 597 -1.059 107.254 -12.661 1.00 0.00 C ATOM 4786 CD2 TYR 597 0.775 105.836 -11.970 1.00 0.00 C ATOM 4787 CE1 TYR 597 -0.277 107.786 -13.704 1.00 0.00 C ATOM 4788 CE2 TYR 597 1.585 106.366 -13.026 1.00 0.00 C ATOM 4789 CZ TYR 597 1.039 107.343 -13.884 1.00 0.00 C ATOM 4790 OH TYR 597 1.778 107.880 -14.916 1.00 0.00 O ATOM 4791 N LEU 598 -1.081 102.688 -11.382 1.00 0.00 N ATOM 4792 CA LEU 598 -0.279 101.649 -12.092 1.00 0.00 C ATOM 4793 CB LEU 598 0.579 100.961 -11.040 1.00 0.00 C ATOM 4794 C LEU 598 -1.098 100.732 -13.111 1.00 0.00 C ATOM 4795 O LEU 598 -0.593 100.126 -14.050 1.00 0.00 O ATOM 4796 CG LEU 598 1.662 101.866 -10.449 1.00 0.00 C ATOM 4797 CD1 LEU 598 2.445 101.261 -9.285 1.00 0.00 C ATOM 4798 CD2 LEU 598 2.755 102.290 -11.429 1.00 0.00 C ATOM 4799 N PHE 599 -2.391 100.629 -12.804 1.00 0.00 N ATOM 4800 CA PHE 599 -3.155 99.726 -13.668 1.00 0.00 C ATOM 4801 CB PHE 599 -4.307 99.134 -12.847 1.00 0.00 C ATOM 4802 C PHE 599 -4.168 100.587 -14.334 1.00 0.00 C ATOM 4803 O PHE 599 -5.374 100.538 -14.086 1.00 0.00 O ATOM 4804 CG PHE 599 -3.705 98.328 -11.747 1.00 0.00 C ATOM 4805 CD1 PHE 599 -2.465 97.667 -11.895 1.00 0.00 C ATOM 4806 CD2 PHE 599 -4.376 98.212 -10.516 1.00 0.00 C ATOM 4807 CE1 PHE 599 -1.895 96.903 -10.836 1.00 0.00 C ATOM 4808 CE2 PHE 599 -3.827 97.451 -9.439 1.00 0.00 C ATOM 4809 CZ PHE 599 -2.581 96.793 -9.603 1.00 0.00 C ATOM 4810 N LEU 600 -3.644 101.434 -15.215 1.00 0.00 N ATOM 4811 CA LEU 600 -4.474 102.426 -15.994 1.00 0.00 C ATOM 4812 CB LEU 600 -3.424 103.203 -16.796 1.00 0.00 C ATOM 4813 C LEU 600 -5.844 102.186 -16.532 1.00 0.00 C ATOM 4814 O LEU 600 -6.772 103.018 -16.491 1.00 0.00 O ATOM 4815 CG LEU 600 -4.011 104.354 -17.615 1.00 0.00 C ATOM 4816 CD1 LEU 600 -4.676 105.458 -16.793 1.00 0.00 C ATOM 4817 CD2 LEU 600 -3.003 105.112 -18.478 1.00 0.00 C ATOM 4818 N ASN 601 -5.833 100.964 -17.103 1.00 0.00 N ATOM 4819 CA ASN 601 -7.056 100.383 -17.892 1.00 0.00 C ATOM 4820 CB ASN 601 -8.371 99.966 -17.196 1.00 0.00 C ATOM 4821 C ASN 601 -7.357 100.918 -19.270 1.00 0.00 C ATOM 4822 O ASN 601 -8.265 101.747 -19.120 1.00 0.00 O ATOM 4823 CG ASN 601 -8.056 98.828 -16.237 1.00 0.00 C ATOM 4824 OD1 ASN 601 -7.131 98.048 -16.461 1.00 0.00 O ATOM 4825 ND2 ASN 601 -8.807 98.670 -15.114 1.00 0.00 N ATOM 4826 N ASP 602 -6.829 100.633 -20.464 1.00 0.00 N ATOM 4827 CA ASP 602 -7.507 101.261 -21.563 1.00 0.00 C ATOM 4828 CB ASP 602 -6.273 101.824 -22.294 1.00 0.00 C ATOM 4829 C ASP 602 -7.577 100.085 -22.476 1.00 0.00 C ATOM 4830 O ASP 602 -6.740 99.776 -23.337 1.00 0.00 O ATOM 4831 CG ASP 602 -6.761 102.633 -23.486 1.00 0.00 C ATOM 4832 OD1 ASP 602 -8.002 102.686 -23.697 1.00 0.00 O ATOM 4833 OD2 ASP 602 -5.899 103.210 -24.203 1.00 0.00 O ATOM 4834 N ASN 603 -8.736 99.440 -22.299 1.00 0.00 N ATOM 4835 CA ASN 603 -9.136 98.140 -22.998 1.00 0.00 C ATOM 4836 CB ASN 603 -9.372 96.865 -22.170 1.00 0.00 C ATOM 4837 C ASN 603 -10.684 98.405 -23.612 1.00 0.00 C ATOM 4838 O ASN 603 -11.529 98.817 -22.817 1.00 0.00 O ATOM 4839 CG ASN 603 -8.076 96.527 -21.446 1.00 0.00 C ATOM 4840 OD1 ASN 603 -7.105 96.086 -22.059 1.00 0.00 O ATOM 4841 ND2 ASN 603 -7.991 96.716 -20.102 1.00 0.00 N ATOM 4842 N GLY 604 -11.000 98.038 -24.851 1.00 0.00 N ATOM 4843 CA GLY 604 -12.297 98.177 -25.110 1.00 0.00 C ATOM 4844 C GLY 604 -12.540 96.835 -25.683 1.00 0.00 C ATOM 4845 O GLY 604 -11.862 96.279 -26.555 1.00 0.00 O ATOM 4846 N TYR 605 -13.585 96.255 -25.104 1.00 0.00 N ATOM 4847 CA TYR 605 -13.841 94.719 -25.451 1.00 0.00 C ATOM 4848 CB TYR 605 -12.905 93.698 -24.773 1.00 0.00 C ATOM 4849 C TYR 605 -15.340 94.577 -25.188 1.00 0.00 C ATOM 4850 O TYR 605 -16.148 95.508 -25.041 1.00 0.00 O ATOM 4851 CG TYR 605 -13.079 93.839 -23.300 1.00 0.00 C ATOM 4852 CD1 TYR 605 -14.007 93.032 -22.628 1.00 0.00 C ATOM 4853 CD2 TYR 605 -12.325 94.769 -22.551 1.00 0.00 C ATOM 4854 CE1 TYR 605 -14.199 93.133 -21.237 1.00 0.00 C ATOM 4855 CE2 TYR 605 -12.508 94.884 -21.135 1.00 0.00 C ATOM 4856 CZ TYR 605 -13.452 94.055 -20.496 1.00 0.00 C ATOM 4857 OH TYR 605 -13.665 94.135 -19.137 1.00 0.00 O ATOM 4858 N LEU 606 -15.813 93.356 -25.435 1.00 0.00 N ATOM 4859 CA LEU 606 -17.284 93.096 -25.258 1.00 0.00 C ATOM 4860 CB LEU 606 -17.736 93.350 -23.810 1.00 0.00 C ATOM 4861 C LEU 606 -18.307 94.186 -25.990 1.00 0.00 C ATOM 4862 O LEU 606 -17.983 95.316 -26.378 1.00 0.00 O ATOM 4863 CG LEU 606 -17.044 92.447 -22.787 1.00 0.00 C ATOM 4864 CD1 LEU 606 -17.342 92.779 -21.326 1.00 0.00 C ATOM 4865 CD2 LEU 606 -17.396 90.964 -22.892 1.00 0.00 C ATOM 4866 N LYS 607 -19.504 93.624 -26.196 1.00 0.00 N ATOM 4867 CA LYS 607 -20.353 94.454 -27.067 1.00 0.00 C ATOM 4868 CB LYS 607 -20.815 95.830 -26.591 1.00 0.00 C ATOM 4869 C LYS 607 -20.367 94.315 -28.507 1.00 0.00 C ATOM 4870 O LYS 607 -19.732 95.239 -29.022 1.00 0.00 O ATOM 4871 CG LYS 607 -21.756 96.531 -27.573 1.00 0.00 C ATOM 4872 CD LYS 607 -22.264 97.885 -27.075 1.00 0.00 C ATOM 4873 CE LYS 607 -23.211 98.582 -28.054 1.00 0.00 C ATOM 4874 NZ LYS 607 -23.661 99.875 -27.490 1.00 0.00 N ATOM 4875 N SER 608 -20.996 93.386 -29.221 1.00 0.00 N ATOM 4876 CA SER 608 -21.030 93.139 -30.571 1.00 0.00 C ATOM 4877 CB SER 608 -22.022 94.110 -31.220 1.00 0.00 C ATOM 4878 C SER 608 -19.712 93.228 -31.275 1.00 0.00 C ATOM 4879 O SER 608 -19.720 93.528 -32.486 1.00 0.00 O ATOM 4880 OG SER 608 -23.317 93.927 -30.667 1.00 0.00 O ATOM 4881 N ILE 609 -18.615 92.890 -30.622 1.00 0.00 N ATOM 4882 CA ILE 609 -17.269 92.808 -31.017 1.00 0.00 C ATOM 4883 CB ILE 609 -16.990 92.550 -32.546 1.00 0.00 C ATOM 4884 C ILE 609 -16.594 94.194 -30.664 1.00 0.00 C ATOM 4885 O ILE 609 -15.499 94.221 -30.104 1.00 0.00 O ATOM 4886 CG1 ILE 609 -17.491 91.182 -33.038 1.00 0.00 C ATOM 4887 CG2 ILE 609 -15.496 92.587 -32.911 1.00 0.00 C ATOM 4888 CD1 ILE 609 -17.450 91.029 -34.558 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.52 65.5 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 24.32 82.9 70 100.0 70 ARMSMC SURFACE . . . . . . . . 67.64 60.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 15.10 90.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 64.74 56.6 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 63.32 57.7 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 60.83 57.6 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 66.30 55.8 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 57.58 60.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.92 55.3 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 66.02 60.0 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 66.55 61.3 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 73.86 52.6 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 68.81 66.7 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.49 33.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 88.38 30.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 77.07 33.3 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 77.73 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 98.19 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.11 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 85.11 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 60.05 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 93.12 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 10.66 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.97 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.97 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.2317 CRMSCA SECONDARY STRUCTURE . . 11.09 35 100.0 35 CRMSCA SURFACE . . . . . . . . 13.17 46 100.0 46 CRMSCA BURIED . . . . . . . . 12.02 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.95 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 11.19 174 100.0 174 CRMSMC SURFACE . . . . . . . . 13.14 228 100.0 228 CRMSMC BURIED . . . . . . . . 12.02 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.19 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 14.09 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 12.48 151 100.0 151 CRMSSC SURFACE . . . . . . . . 14.43 196 100.0 196 CRMSSC BURIED . . . . . . . . 12.96 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.57 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 11.84 291 100.0 291 CRMSALL SURFACE . . . . . . . . 13.80 380 100.0 380 CRMSALL BURIED . . . . . . . . 12.39 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.183 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 10.434 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 12.417 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 11.107 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.163 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 10.525 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 12.386 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 11.145 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.424 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 13.280 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 11.741 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 13.693 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 12.073 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.778 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 11.132 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 13.039 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 11.525 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 26 56 56 DISTCA CA (P) 0.00 0.00 0.00 0.00 46.43 56 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.18 DISTCA ALL (N) 0 0 0 1 179 459 459 DISTALL ALL (P) 0.00 0.00 0.00 0.22 39.00 459 DISTALL ALL (RMS) 0.00 0.00 0.00 4.01 8.13 DISTALL END of the results output