####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 85 ( 698), selected 85 , name T0547TS171_1-D1 # Molecule2: number of CA atoms 183 ( 1490), selected 85 , name T0547-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS171_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 60 5 - 342 2.92 15.63 LCS_AVERAGE: 25.63 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 14 - 38 1.92 17.03 LONGEST_CONTINUOUS_SEGMENT: 25 15 - 39 1.99 16.82 LCS_AVERAGE: 9.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 42 - 341 0.95 15.62 LCS_AVERAGE: 6.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 85 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 5 G 5 5 7 60 4 5 6 7 17 18 25 42 49 55 56 60 60 60 60 60 60 61 62 63 LCS_GDT I 6 I 6 5 7 60 4 5 12 20 25 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT D 7 D 7 5 7 60 4 5 10 18 26 43 46 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 8 I 8 5 7 60 4 5 6 7 13 32 38 44 53 55 56 60 60 60 60 60 60 61 62 63 LCS_GDT W 9 W 9 5 15 60 3 5 8 27 39 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT G 10 G 10 5 15 60 3 9 15 34 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT N 11 N 11 12 15 60 3 7 15 18 26 37 45 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT E 12 E 12 12 15 60 5 16 28 36 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT N 13 N 13 12 15 60 3 6 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT F 14 F 14 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 15 I 15 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 16 I 16 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 17 K 17 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT N 18 N 18 12 25 60 7 14 20 34 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT G 19 G 19 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 20 K 20 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT V 21 V 21 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT C 22 C 22 12 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 23 I 23 10 25 60 8 17 28 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT N 24 N 24 3 25 60 0 3 4 5 15 19 28 33 40 52 57 60 60 60 60 60 60 61 62 63 LCS_GDT Y 25 Y 25 3 25 60 0 3 13 20 23 32 42 48 52 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT E 26 E 26 3 25 60 0 3 9 18 21 26 39 48 51 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 27 K 27 3 25 60 3 5 10 15 21 26 36 45 51 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 28 K 28 11 25 60 11 23 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT P 29 P 29 11 25 60 11 23 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT A 30 A 30 11 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 31 I 31 11 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 32 I 32 11 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT D 33 D 33 11 25 60 11 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 34 I 34 11 25 60 11 23 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT V 35 V 35 11 25 60 10 17 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 36 K 36 11 25 60 7 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT E 37 E 37 11 25 60 10 23 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 38 L 38 11 25 60 3 12 20 23 29 43 46 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT R 39 R 39 4 25 60 3 4 4 8 13 43 46 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT D 40 D 40 4 16 60 3 4 4 8 10 12 14 24 51 52 57 60 60 60 60 60 60 60 62 62 LCS_GDT D 41 D 41 4 24 60 3 4 30 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT G 42 G 42 22 24 60 4 7 20 23 32 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT Y 43 Y 43 22 24 60 4 5 18 22 31 40 46 50 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT K 44 K 44 22 24 60 4 14 20 23 32 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT G 45 G 45 22 24 60 4 5 17 22 31 40 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT P 46 P 46 22 24 60 14 18 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 47 L 47 22 24 60 14 18 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 48 L 48 22 24 60 14 18 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 49 L 49 22 24 60 14 18 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT R 50 R 50 22 24 60 12 18 30 37 41 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT F 51 F 51 22 24 60 12 17 22 36 41 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT A 330 A 330 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT V 331 V 331 22 24 60 12 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 332 L 332 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT I 333 I 333 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT A 334 A 334 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT P 335 P 335 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT V 336 V 336 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 337 L 337 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT E 338 E 338 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT L 339 L 339 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT F 340 F 340 22 24 60 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT S 341 S 341 22 24 60 11 17 31 36 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT Q 342 Q 342 21 24 60 3 5 11 24 38 42 48 51 53 55 57 60 60 60 60 60 60 61 62 63 LCS_GDT E 435 E 435 4 5 8 3 4 4 4 4 6 6 6 6 8 9 9 13 14 16 17 17 18 18 20 LCS_GDT V 436 V 436 4 5 8 3 4 4 4 4 6 6 6 7 8 9 9 13 14 16 18 19 20 21 22 LCS_GDT Q 437 Q 437 4 5 12 3 4 4 4 4 6 6 6 6 7 9 9 13 14 16 18 19 20 21 22 LCS_GDT E 438 E 438 4 5 13 3 4 4 4 4 6 6 6 9 10 11 12 12 20 21 22 23 26 28 28 LCS_GDT R 439 R 439 3 5 13 3 3 4 4 5 7 7 9 10 10 11 13 16 20 21 22 23 26 28 28 LCS_GDT Y 440 Y 440 4 5 13 4 4 5 5 5 7 7 9 10 10 12 14 16 20 21 22 23 23 28 28 LCS_GDT L 441 L 441 4 5 13 4 4 5 5 5 7 7 9 10 11 12 15 16 20 21 22 23 26 28 28 LCS_GDT V 442 V 442 4 5 17 4 4 5 5 5 7 7 9 10 12 12 15 16 20 21 26 27 27 28 29 LCS_GDT N 443 N 443 4 5 17 4 4 5 5 5 7 7 9 12 13 15 15 16 20 21 26 27 31 31 31 LCS_GDT F 444 F 444 3 5 17 3 3 5 5 5 7 8 9 12 13 16 19 21 24 26 30 33 40 50 58 LCS_GDT S 445 S 445 3 5 17 1 3 4 4 5 7 7 9 12 13 16 19 21 24 28 35 37 45 50 58 LCS_GDT L 446 L 446 3 5 17 3 3 3 4 4 6 7 9 12 13 15 20 24 27 32 39 44 54 61 63 LCS_GDT F 447 F 447 3 5 17 3 3 3 4 8 11 12 12 14 14 17 21 25 30 36 40 48 56 61 63 LCS_GDT Q 448 Q 448 3 4 17 3 3 10 12 14 14 14 21 22 30 35 40 50 55 57 59 60 61 62 63 LCS_GDT S 449 S 449 3 9 17 3 3 3 4 6 8 18 19 23 30 35 41 50 55 57 59 60 61 62 63 LCS_GDT M 450 M 450 7 9 17 6 7 7 8 8 9 9 10 15 18 20 23 30 36 39 43 53 56 59 60 LCS_GDT P 451 P 451 7 9 17 6 7 7 8 8 9 10 11 13 21 23 28 30 36 40 44 49 56 58 60 LCS_GDT D 452 D 452 7 9 17 6 7 7 8 8 9 9 10 13 13 20 22 23 24 26 28 35 39 42 45 LCS_GDT F 453 F 453 7 9 17 6 7 7 8 8 9 10 11 13 15 19 22 26 27 32 34 43 49 53 57 LCS_GDT W 454 W 454 7 9 17 6 7 7 8 8 9 10 11 15 18 19 29 36 38 41 50 55 57 59 61 LCS_GDT G 455 G 455 7 9 17 6 7 7 8 8 9 9 11 15 18 20 23 30 36 39 42 43 50 58 60 LCS_GDT L 456 L 456 7 9 17 6 7 7 8 8 9 10 11 13 15 19 22 23 24 26 33 35 43 46 50 LCS_GDT E 457 E 457 3 9 17 3 3 4 8 8 9 10 11 13 15 16 22 23 24 26 28 30 40 46 50 LCS_GDT Q 458 Q 458 3 5 17 3 3 3 4 4 5 6 8 8 9 11 13 17 20 26 26 29 31 34 35 LCS_GDT N 459 N 459 3 5 17 3 3 3 4 4 5 5 8 8 9 9 10 10 13 16 17 17 25 26 26 LCS_AVERAGE LCS_A: 13.79 ( 6.08 9.68 25.63 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 24 31 37 41 43 48 51 53 55 57 60 60 60 60 60 60 61 62 63 GDT PERCENT_AT 7.65 13.11 16.94 20.22 22.40 23.50 26.23 27.87 28.96 30.05 31.15 32.79 32.79 32.79 32.79 32.79 32.79 33.33 33.88 34.43 GDT RMS_LOCAL 0.29 0.75 0.91 1.11 1.40 1.60 1.88 2.05 2.19 2.50 2.64 2.92 2.92 2.92 2.92 2.92 2.92 3.76 3.82 4.91 GDT RMS_ALL_AT 15.67 15.90 16.00 16.04 15.76 15.62 15.64 15.57 15.50 15.64 15.60 15.63 15.63 15.63 15.63 15.63 15.63 14.97 15.04 14.35 # Checking swapping # possible swapping detected: D 7 D 7 # possible swapping detected: E 26 E 26 # possible swapping detected: D 33 D 33 # possible swapping detected: E 37 E 37 # possible swapping detected: D 40 D 40 # possible swapping detected: D 41 D 41 # possible swapping detected: E 338 E 338 # possible swapping detected: F 447 F 447 # possible swapping detected: D 452 D 452 # possible swapping detected: E 457 E 457 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 5 G 5 5.937 0 0.046 0.046 6.485 28.214 28.214 LGA I 6 I 6 3.563 0 0.148 1.309 6.380 55.833 38.155 LGA D 7 D 7 3.630 0 0.121 0.239 6.845 47.024 32.262 LGA I 8 I 8 5.693 0 0.148 1.469 11.208 33.214 18.452 LGA W 9 W 9 3.123 0 0.111 1.198 12.090 59.405 22.415 LGA G 10 G 10 2.940 0 0.155 0.155 4.335 56.429 56.429 LGA N 11 N 11 4.537 0 0.258 1.099 8.678 43.690 27.381 LGA E 12 E 12 2.667 0 0.362 0.699 8.157 63.214 38.201 LGA N 13 N 13 1.726 0 0.344 0.288 5.584 77.143 55.952 LGA F 14 F 14 0.904 0 0.077 1.287 6.511 88.214 62.468 LGA I 15 I 15 0.909 0 0.040 1.105 3.417 90.476 78.988 LGA I 16 I 16 0.795 0 0.049 1.240 3.000 90.476 78.988 LGA K 17 K 17 0.698 0 0.458 0.911 2.247 84.048 82.804 LGA N 18 N 18 2.523 0 0.558 1.202 6.200 55.952 50.774 LGA G 19 G 19 0.189 0 0.250 0.250 1.332 92.976 92.976 LGA K 20 K 20 1.234 0 0.030 1.030 3.700 90.595 74.921 LGA V 21 V 21 1.068 0 0.055 1.078 3.711 83.690 76.054 LGA C 22 C 22 0.751 0 0.096 0.197 1.354 88.214 87.460 LGA I 23 I 23 2.120 0 0.217 1.063 5.158 51.548 46.131 LGA N 24 N 24 7.178 0 0.464 1.343 12.702 21.190 10.774 LGA Y 25 Y 25 6.294 0 0.551 0.910 6.877 17.262 32.619 LGA E 26 E 26 6.550 0 0.548 1.150 7.017 17.262 17.407 LGA K 27 K 27 6.787 0 0.498 1.454 10.494 14.524 7.619 LGA K 28 K 28 2.014 0 0.379 1.077 8.185 61.071 41.376 LGA P 29 P 29 1.825 0 0.044 0.556 2.442 70.833 69.388 LGA A 30 A 30 1.257 0 0.036 0.043 1.497 81.429 81.429 LGA I 31 I 31 1.057 0 0.040 0.596 2.214 85.952 80.536 LGA I 32 I 32 0.979 0 0.087 0.537 3.160 90.476 82.024 LGA D 33 D 33 1.125 0 0.028 0.199 1.800 83.690 80.417 LGA I 34 I 34 1.556 0 0.018 0.638 2.614 75.000 70.952 LGA V 35 V 35 1.424 0 0.067 0.127 1.741 79.286 80.204 LGA K 36 K 36 0.573 0 0.112 1.209 6.340 90.476 74.233 LGA E 37 E 37 1.667 0 0.140 1.024 3.085 77.143 66.931 LGA L 38 L 38 3.780 0 0.614 1.318 9.642 46.905 27.738 LGA R 39 R 39 3.814 0 0.620 0.916 15.350 50.119 20.606 LGA D 40 D 40 5.885 0 0.122 1.071 10.241 26.310 14.286 LGA D 41 D 41 2.490 0 0.520 1.133 7.515 65.833 44.405 LGA G 42 G 42 4.066 0 0.675 0.675 4.533 42.619 42.619 LGA Y 43 Y 43 4.457 0 0.559 0.616 8.590 45.357 25.198 LGA K 44 K 44 3.519 0 0.064 1.124 7.504 38.810 35.397 LGA G 45 G 45 3.866 0 0.096 0.096 3.866 62.381 62.381 LGA P 46 P 46 1.181 0 0.093 0.478 1.765 79.286 78.980 LGA L 47 L 47 1.426 0 0.048 1.366 5.297 81.429 69.345 LGA L 48 L 48 1.298 0 0.036 0.925 3.159 79.286 73.393 LGA L 49 L 49 1.705 0 0.031 0.969 2.884 72.857 70.893 LGA R 50 R 50 2.146 0 0.082 0.791 3.481 62.857 63.636 LGA F 51 F 51 2.551 0 0.077 1.029 8.760 64.881 36.537 LGA A 330 A 330 1.435 0 0.127 0.180 1.579 79.286 79.714 LGA V 331 V 331 1.350 0 0.084 1.106 3.363 81.429 75.714 LGA L 332 L 332 0.910 0 0.089 1.177 3.025 88.214 80.952 LGA I 333 I 333 0.846 0 0.021 0.154 0.946 90.476 90.476 LGA A 334 A 334 1.027 0 0.076 0.094 1.329 83.690 83.238 LGA P 335 P 335 0.912 0 0.040 0.158 1.195 88.214 86.599 LGA V 336 V 336 0.865 0 0.093 0.924 2.466 88.214 81.837 LGA L 337 L 337 1.041 0 0.094 0.120 1.489 83.690 82.560 LGA E 338 E 338 0.892 0 0.098 0.938 3.606 90.476 76.667 LGA L 339 L 339 0.658 0 0.047 0.224 1.002 90.476 91.726 LGA F 340 F 340 1.210 0 0.134 1.386 4.239 85.952 73.420 LGA S 341 S 341 1.260 0 0.217 0.586 2.612 85.952 78.968 LGA Q 342 Q 342 3.408 0 0.351 1.119 9.136 42.143 26.349 LGA E 435 E 435 37.014 0 0.119 0.243 38.168 0.000 0.000 LGA V 436 V 436 35.226 0 0.055 0.072 37.350 0.000 0.000 LGA Q 437 Q 437 35.366 0 0.620 0.933 35.871 0.000 0.000 LGA E 438 E 438 35.709 0 0.096 1.231 40.495 0.000 0.000 LGA R 439 R 439 35.299 0 0.306 1.651 46.958 0.000 0.000 LGA Y 440 Y 440 30.666 0 0.547 1.427 31.770 0.000 0.000 LGA L 441 L 441 31.057 0 0.216 0.949 35.441 0.000 0.000 LGA V 442 V 442 24.751 0 0.013 0.228 27.336 0.000 0.000 LGA N 443 N 443 23.266 0 0.291 1.470 26.093 0.000 0.000 LGA F 444 F 444 19.563 0 0.328 1.419 22.602 0.000 0.000 LGA S 445 S 445 20.430 0 0.626 0.706 21.784 0.000 0.000 LGA L 446 L 446 19.951 0 0.602 0.903 22.247 0.000 0.000 LGA F 447 F 447 20.414 0 0.651 1.206 30.079 0.000 0.000 LGA Q 448 Q 448 14.628 0 0.574 1.399 16.784 0.000 0.000 LGA S 449 S 449 14.513 0 0.702 0.629 17.273 0.000 0.000 LGA M 450 M 450 20.996 0 0.442 0.742 25.865 0.000 0.000 LGA P 451 P 451 22.619 0 0.053 0.107 24.996 0.000 0.000 LGA D 452 D 452 28.549 0 0.145 0.388 33.021 0.000 0.000 LGA F 453 F 453 27.029 0 0.023 0.262 28.673 0.000 0.000 LGA W 454 W 454 23.999 0 0.029 1.284 25.857 0.000 0.000 LGA G 455 G 455 27.645 0 0.120 0.120 30.793 0.000 0.000 LGA L 456 L 456 32.725 0 0.544 1.334 34.288 0.000 0.000 LGA E 457 E 457 33.416 0 0.116 1.364 35.939 0.000 0.000 LGA Q 458 Q 458 33.500 0 0.088 1.215 34.628 0.000 0.000 LGA N 459 N 459 37.927 0 0.373 1.166 42.303 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 85 340 340 100.00 697 697 100.00 183 SUMMARY(RMSD_GDC): 12.478 12.439 13.551 22.093 19.227 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 85 183 4.0 51 2.05 23.497 21.147 2.373 LGA_LOCAL RMSD: 2.049 Number of atoms: 51 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.569 Number of assigned atoms: 85 Std_ASGN_ATOMS RMSD: 12.478 Standard rmsd on all 85 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.515157 * X + 0.313852 * Y + 0.797565 * Z + -82.902786 Y_new = 0.173248 * X + -0.949466 * Y + 0.261724 * Z + 112.983612 Z_new = 0.839404 * X + 0.003348 * Y + -0.543498 * Z + -71.301277 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.324420 -0.996185 3.135433 [DEG: 18.5879 -57.0772 179.6471 ] ZXZ: 1.887878 2.145395 1.566808 [DEG: 108.1674 122.9221 89.7715 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS171_1-D1 REMARK 2: T0547-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS171_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 85 183 4.0 51 2.05 21.147 12.48 REMARK ---------------------------------------------------------- MOLECULE T0547TS171_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REMARK PARENT 2p3e_A ATOM 1 N GLY 5 -20.665 68.710 -40.762 1.00 0.00 N ATOM 2 CA GLY 5 -19.822 69.751 -41.386 1.00 0.00 C ATOM 3 C GLY 5 -20.425 71.095 -41.162 1.00 0.00 C ATOM 4 O GLY 5 -20.282 72.000 -41.980 1.00 0.00 O ATOM 5 N ILE 6 -21.123 71.260 -40.025 1.00 0.00 N ATOM 6 CA ILE 6 -21.740 72.518 -39.753 1.00 0.00 C ATOM 7 CB ILE 6 -22.602 72.515 -38.514 1.00 0.00 C ATOM 8 CG2 ILE 6 -23.695 71.455 -38.729 1.00 0.00 C ATOM 9 CG1 ILE 6 -21.795 72.305 -37.220 1.00 0.00 C ATOM 10 CD1 ILE 6 -21.112 73.570 -36.696 1.00 0.00 C ATOM 11 C ILE 6 -20.647 73.526 -39.612 1.00 0.00 C ATOM 12 O ILE 6 -20.769 74.655 -40.083 1.00 0.00 O ATOM 13 N ASP 7 -19.526 73.127 -38.980 1.00 0.00 N ATOM 14 CA ASP 7 -18.451 74.044 -38.731 1.00 0.00 C ATOM 15 CB ASP 7 -17.259 73.391 -38.007 1.00 0.00 C ATOM 16 CG ASP 7 -17.664 73.121 -36.563 1.00 0.00 C ATOM 17 OD1 ASP 7 -18.470 73.920 -36.017 1.00 0.00 O ATOM 18 OD2 ASP 7 -17.171 72.116 -35.985 1.00 0.00 O ATOM 19 C ASP 7 -17.941 74.583 -40.032 1.00 0.00 C ATOM 20 O ASP 7 -17.713 75.785 -40.159 1.00 0.00 O ATOM 21 N ILE 8 -17.771 73.709 -41.042 1.00 0.00 N ATOM 22 CA ILE 8 -17.234 74.123 -42.307 1.00 0.00 C ATOM 23 CB ILE 8 -16.991 72.976 -43.260 1.00 0.00 C ATOM 24 CG2 ILE 8 -18.341 72.530 -43.839 1.00 0.00 C ATOM 25 CG1 ILE 8 -15.972 73.355 -44.352 1.00 0.00 C ATOM 26 CD1 ILE 8 -16.436 74.444 -45.316 1.00 0.00 C ATOM 27 C ILE 8 -18.196 75.086 -42.926 1.00 0.00 C ATOM 28 O ILE 8 -17.792 76.054 -43.566 1.00 0.00 O ATOM 29 N TRP 9 -19.507 74.853 -42.732 1.00 0.00 N ATOM 30 CA TRP 9 -20.497 75.690 -43.342 1.00 0.00 C ATOM 31 CB TRP 9 -21.932 75.332 -42.910 1.00 0.00 C ATOM 32 CG TRP 9 -22.409 73.987 -43.406 1.00 0.00 C ATOM 33 CD2 TRP 9 -23.688 73.411 -43.086 1.00 0.00 C ATOM 34 CD1 TRP 9 -21.771 73.087 -44.209 1.00 0.00 C ATOM 35 NE1 TRP 9 -22.569 71.987 -44.408 1.00 0.00 N ATOM 36 CE2 TRP 9 -23.751 72.172 -43.724 1.00 0.00 C ATOM 37 CE3 TRP 9 -24.722 73.874 -42.324 1.00 0.00 C ATOM 38 CZ2 TRP 9 -24.854 71.375 -43.609 1.00 0.00 C ATOM 39 CZ3 TRP 9 -25.834 73.068 -42.211 1.00 0.00 C ATOM 40 CH2 TRP 9 -25.898 71.842 -42.842 1.00 0.00 C ATOM 41 C TRP 9 -20.244 77.098 -42.910 1.00 0.00 C ATOM 42 O TRP 9 -20.313 78.019 -43.724 1.00 0.00 O ATOM 43 N GLY 10 -19.970 77.316 -41.610 1.00 0.00 N ATOM 44 CA GLY 10 -19.709 78.657 -41.175 1.00 0.00 C ATOM 45 C GLY 10 -18.439 79.167 -41.799 1.00 0.00 C ATOM 46 O GLY 10 -18.426 80.255 -42.373 1.00 0.00 O ATOM 47 N ASN 11 -17.334 78.393 -41.704 1.00 0.00 N ATOM 48 CA ASN 11 -16.085 78.824 -42.278 1.00 0.00 C ATOM 49 CB ASN 11 -15.209 79.625 -41.298 1.00 0.00 C ATOM 50 CG ASN 11 -14.049 80.236 -42.075 1.00 0.00 C ATOM 51 OD1 ASN 11 -13.474 79.610 -42.964 1.00 0.00 O ATOM 52 ND2 ASN 11 -13.697 81.503 -41.733 1.00 0.00 N ATOM 53 C ASN 11 -15.311 77.597 -42.665 1.00 0.00 C ATOM 54 O ASN 11 -15.043 76.729 -41.837 1.00 0.00 O ATOM 55 N GLU 12 -14.872 77.536 -43.937 1.00 0.00 N ATOM 56 CA GLU 12 -14.217 76.386 -44.492 1.00 0.00 C ATOM 57 CB GLU 12 -13.905 76.534 -45.994 1.00 0.00 C ATOM 58 CG GLU 12 -12.828 77.576 -46.305 1.00 0.00 C ATOM 59 CD GLU 12 -13.425 78.965 -46.135 1.00 0.00 C ATOM 60 OE1 GLU 12 -14.678 79.071 -46.055 1.00 0.00 O ATOM 61 OE2 GLU 12 -12.630 79.942 -46.090 1.00 0.00 O ATOM 62 C GLU 12 -12.915 76.108 -43.812 1.00 0.00 C ATOM 63 O GLU 12 -12.577 74.944 -43.601 1.00 0.00 O ATOM 64 N ASN 13 -12.111 77.130 -43.452 1.00 0.00 N ATOM 65 CA ASN 13 -10.878 76.652 -42.900 1.00 0.00 C ATOM 66 CB ASN 13 -9.609 77.271 -43.475 1.00 0.00 C ATOM 67 CG ASN 13 -9.536 76.784 -44.917 1.00 0.00 C ATOM 68 OD1 ASN 13 -9.498 75.582 -45.177 1.00 0.00 O ATOM 69 ND2 ASN 13 -9.530 77.741 -45.884 1.00 0.00 N ATOM 70 C ASN 13 -10.863 76.708 -41.416 1.00 0.00 C ATOM 71 O ASN 13 -9.858 77.059 -40.794 1.00 0.00 O ATOM 72 N PHE 14 -11.994 76.294 -40.823 1.00 0.00 N ATOM 73 CA PHE 14 -12.074 76.097 -39.415 1.00 0.00 C ATOM 74 CB PHE 14 -13.376 76.633 -38.794 1.00 0.00 C ATOM 75 CG PHE 14 -13.358 76.348 -37.332 1.00 0.00 C ATOM 76 CD1 PHE 14 -13.725 75.106 -36.864 1.00 0.00 C ATOM 77 CD2 PHE 14 -12.983 77.316 -36.429 1.00 0.00 C ATOM 78 CE1 PHE 14 -13.717 74.832 -35.518 1.00 0.00 C ATOM 79 CE2 PHE 14 -12.973 77.045 -35.081 1.00 0.00 C ATOM 80 CZ PHE 14 -13.339 75.802 -34.624 1.00 0.00 C ATOM 81 C PHE 14 -12.108 74.614 -39.313 1.00 0.00 C ATOM 82 O PHE 14 -12.863 73.964 -40.032 1.00 0.00 O ATOM 83 N ILE 15 -11.244 74.021 -38.476 1.00 0.00 N ATOM 84 CA ILE 15 -11.265 72.594 -38.408 1.00 0.00 C ATOM 85 CB ILE 15 -10.303 71.957 -39.371 1.00 0.00 C ATOM 86 CG2 ILE 15 -10.325 70.434 -39.155 1.00 0.00 C ATOM 87 CG1 ILE 15 -10.659 72.375 -40.808 1.00 0.00 C ATOM 88 CD1 ILE 15 -9.572 72.052 -41.832 1.00 0.00 C ATOM 89 C ILE 15 -10.867 72.200 -37.030 1.00 0.00 C ATOM 90 O ILE 15 -10.155 72.930 -36.340 1.00 0.00 O ATOM 91 N ILE 16 -11.340 71.022 -36.586 1.00 0.00 N ATOM 92 CA ILE 16 -10.925 70.561 -35.303 1.00 0.00 C ATOM 93 CB ILE 16 -12.036 70.014 -34.446 1.00 0.00 C ATOM 94 CG2 ILE 16 -13.001 71.173 -34.138 1.00 0.00 C ATOM 95 CG1 ILE 16 -12.710 68.795 -35.097 1.00 0.00 C ATOM 96 CD1 ILE 16 -13.410 69.107 -36.419 1.00 0.00 C ATOM 97 C ILE 16 -9.933 69.483 -35.563 1.00 0.00 C ATOM 98 O ILE 16 -10.226 68.483 -36.217 1.00 0.00 O ATOM 99 N LYS 17 -8.696 69.700 -35.090 1.00 0.00 N ATOM 100 CA LYS 17 -7.683 68.711 -35.256 1.00 0.00 C ATOM 101 CB LYS 17 -6.277 69.323 -35.287 1.00 0.00 C ATOM 102 CG LYS 17 -5.223 68.413 -35.903 1.00 0.00 C ATOM 103 CD LYS 17 -5.339 68.298 -37.422 1.00 0.00 C ATOM 104 CE LYS 17 -5.037 69.608 -38.151 1.00 0.00 C ATOM 105 NZ LYS 17 -4.829 69.347 -39.591 1.00 0.00 N ATOM 106 C LYS 17 -7.786 67.912 -34.013 1.00 0.00 C ATOM 107 O LYS 17 -7.306 68.337 -32.964 1.00 0.00 O ATOM 108 N ASN 18 -8.416 66.728 -34.098 1.00 0.00 N ATOM 109 CA ASN 18 -8.638 66.040 -32.872 1.00 0.00 C ATOM 110 CB ASN 18 -7.360 65.704 -32.083 1.00 0.00 C ATOM 111 CG ASN 18 -6.723 64.498 -32.761 1.00 0.00 C ATOM 112 OD1 ASN 18 -5.568 64.532 -33.182 1.00 0.00 O ATOM 113 ND2 ASN 18 -7.507 63.391 -32.871 1.00 0.00 N ATOM 114 C ASN 18 -9.507 66.957 -32.082 1.00 0.00 C ATOM 115 O ASN 18 -10.438 67.556 -32.616 1.00 0.00 O ATOM 116 N GLY 19 -9.241 67.064 -30.774 1.00 0.00 N ATOM 117 CA GLY 19 -10.015 67.891 -29.899 1.00 0.00 C ATOM 118 C GLY 19 -9.869 69.357 -30.204 1.00 0.00 C ATOM 119 O GLY 19 -10.822 70.114 -30.026 1.00 0.00 O ATOM 120 N LYS 20 -8.671 69.804 -30.638 1.00 0.00 N ATOM 121 CA LYS 20 -8.365 71.209 -30.778 1.00 0.00 C ATOM 122 CB LYS 20 -6.858 71.482 -30.906 1.00 0.00 C ATOM 123 CG LYS 20 -6.049 70.988 -29.705 1.00 0.00 C ATOM 124 CD LYS 20 -6.002 69.462 -29.603 1.00 0.00 C ATOM 125 CE LYS 20 -5.197 68.948 -28.410 1.00 0.00 C ATOM 126 NZ LYS 20 -5.949 69.187 -27.160 1.00 0.00 N ATOM 127 C LYS 20 -9.013 71.837 -31.976 1.00 0.00 C ATOM 128 O LYS 20 -9.224 71.194 -33.002 1.00 0.00 O ATOM 129 N VAL 21 -9.339 73.148 -31.859 1.00 0.00 N ATOM 130 CA VAL 21 -9.916 73.888 -32.948 1.00 0.00 C ATOM 131 CB VAL 21 -10.995 74.843 -32.523 1.00 0.00 C ATOM 132 CG1 VAL 21 -12.180 74.031 -31.970 1.00 0.00 C ATOM 133 CG2 VAL 21 -10.395 75.831 -31.508 1.00 0.00 C ATOM 134 C VAL 21 -8.819 74.700 -33.579 1.00 0.00 C ATOM 135 O VAL 21 -7.997 75.287 -32.877 1.00 0.00 O ATOM 136 N CYS 22 -8.775 74.732 -34.931 1.00 0.00 N ATOM 137 CA CYS 22 -7.765 75.468 -35.650 1.00 0.00 C ATOM 138 CB CYS 22 -6.811 74.564 -36.454 1.00 0.00 C ATOM 139 SG CYS 22 -5.843 73.440 -35.403 1.00 0.00 S ATOM 140 C CYS 22 -8.467 76.347 -36.647 1.00 0.00 C ATOM 141 O CYS 22 -9.520 75.977 -37.163 1.00 0.00 O ATOM 142 N ILE 23 -7.928 77.555 -36.937 1.00 0.00 N ATOM 143 CA ILE 23 -8.659 78.375 -37.871 1.00 0.00 C ATOM 144 CB ILE 23 -9.832 79.057 -37.220 1.00 0.00 C ATOM 145 CG2 ILE 23 -9.268 80.148 -36.292 1.00 0.00 C ATOM 146 CG1 ILE 23 -10.838 79.586 -38.258 1.00 0.00 C ATOM 147 CD1 ILE 23 -12.143 80.089 -37.642 1.00 0.00 C ATOM 148 C ILE 23 -7.813 79.470 -38.453 1.00 0.00 C ATOM 149 O ILE 23 -6.681 79.684 -38.019 1.00 0.00 O ATOM 150 N ASN 24 -8.371 80.135 -39.504 1.00 0.00 N ATOM 151 CA ASN 24 -7.903 81.337 -40.156 1.00 0.00 C ATOM 152 CB ASN 24 -6.644 81.954 -39.549 1.00 0.00 C ATOM 153 CG ASN 24 -7.072 82.397 -38.157 1.00 0.00 C ATOM 154 OD1 ASN 24 -6.428 82.057 -37.168 1.00 0.00 O ATOM 155 ND2 ASN 24 -8.195 83.158 -38.072 1.00 0.00 N ATOM 156 C ASN 24 -7.735 81.079 -41.621 1.00 0.00 C ATOM 157 O ASN 24 -8.178 80.029 -42.081 1.00 0.00 O ATOM 158 N TYR 25 -7.137 82.055 -42.369 1.00 0.00 N ATOM 159 CA TYR 25 -6.835 81.969 -43.786 1.00 0.00 C ATOM 160 CB TYR 25 -5.739 82.997 -44.191 1.00 0.00 C ATOM 161 CG TYR 25 -5.026 82.774 -45.506 1.00 0.00 C ATOM 162 CD1 TYR 25 -3.972 81.891 -45.608 1.00 0.00 C ATOM 163 CD2 TYR 25 -5.360 83.466 -46.648 1.00 0.00 C ATOM 164 CE1 TYR 25 -3.302 81.686 -46.791 1.00 0.00 C ATOM 165 CE2 TYR 25 -4.704 83.276 -47.841 1.00 0.00 C ATOM 166 CZ TYR 25 -3.670 82.380 -47.916 1.00 0.00 C ATOM 167 OH TYR 25 -2.988 82.176 -49.136 1.00 0.00 O ATOM 168 C TYR 25 -6.288 80.613 -43.926 1.00 0.00 C ATOM 169 O TYR 25 -5.112 80.420 -43.624 1.00 0.00 O ATOM 170 N GLU 26 -7.149 79.713 -44.468 1.00 0.00 N ATOM 171 CA GLU 26 -7.036 78.277 -44.480 1.00 0.00 C ATOM 172 CB GLU 26 -6.663 77.722 -45.868 1.00 0.00 C ATOM 173 CG GLU 26 -5.369 78.305 -46.444 1.00 0.00 C ATOM 174 CD GLU 26 -5.138 77.663 -47.802 1.00 0.00 C ATOM 175 OE1 GLU 26 -5.926 76.747 -48.162 1.00 0.00 O ATOM 176 OE2 GLU 26 -4.171 78.076 -48.499 1.00 0.00 O ATOM 177 C GLU 26 -5.983 77.901 -43.511 1.00 0.00 C ATOM 178 O GLU 26 -4.937 77.383 -43.899 1.00 0.00 O ATOM 179 N LYS 27 -6.195 78.142 -42.196 1.00 0.00 N ATOM 180 CA LYS 27 -4.922 77.934 -41.591 1.00 0.00 C ATOM 181 CB LYS 27 -3.998 79.145 -41.493 1.00 0.00 C ATOM 182 CG LYS 27 -4.491 80.202 -40.526 1.00 0.00 C ATOM 183 CD LYS 27 -3.393 81.184 -40.145 1.00 0.00 C ATOM 184 CE LYS 27 -2.781 80.916 -38.778 1.00 0.00 C ATOM 185 NZ LYS 27 -3.855 80.590 -37.815 1.00 0.00 N ATOM 186 C LYS 27 -4.896 77.358 -40.241 1.00 0.00 C ATOM 187 O LYS 27 -5.426 77.922 -39.300 1.00 0.00 O ATOM 188 N LYS 28 -3.987 76.381 -40.117 1.00 0.00 N ATOM 189 CA LYS 28 -3.764 75.444 -39.067 1.00 0.00 C ATOM 190 CB LYS 28 -2.580 74.498 -39.351 1.00 0.00 C ATOM 191 CG LYS 28 -2.438 73.380 -38.313 1.00 0.00 C ATOM 192 CD LYS 28 -1.527 72.228 -38.746 1.00 0.00 C ATOM 193 CE LYS 28 -0.053 72.426 -38.387 1.00 0.00 C ATOM 194 NZ LYS 28 0.696 71.175 -38.642 1.00 0.00 N ATOM 195 C LYS 28 -3.538 76.037 -37.708 1.00 0.00 C ATOM 196 O LYS 28 -3.674 75.272 -36.763 1.00 0.00 O ATOM 197 N PRO 29 -3.164 77.251 -37.447 1.00 0.00 N ATOM 198 CA PRO 29 -2.940 77.547 -36.055 1.00 0.00 C ATOM 199 CD PRO 29 -2.180 77.919 -38.274 1.00 0.00 C ATOM 200 CB PRO 29 -2.156 78.853 -36.019 1.00 0.00 C ATOM 201 CG PRO 29 -1.307 78.741 -37.300 1.00 0.00 C ATOM 202 C PRO 29 -4.091 77.397 -35.105 1.00 0.00 C ATOM 203 O PRO 29 -5.227 77.740 -35.432 1.00 0.00 O ATOM 204 N ALA 30 -3.783 76.831 -33.918 1.00 0.00 N ATOM 205 CA ALA 30 -4.766 76.506 -32.929 1.00 0.00 C ATOM 206 CB ALA 30 -4.244 75.552 -31.839 1.00 0.00 C ATOM 207 C ALA 30 -5.245 77.742 -32.250 1.00 0.00 C ATOM 208 O ALA 30 -4.476 78.649 -31.941 1.00 0.00 O ATOM 209 N ILE 31 -6.564 77.786 -31.992 1.00 0.00 N ATOM 210 CA ILE 31 -7.196 78.879 -31.315 1.00 0.00 C ATOM 211 CB ILE 31 -8.692 78.764 -31.276 1.00 0.00 C ATOM 212 CG2 ILE 31 -9.220 79.822 -30.292 1.00 0.00 C ATOM 213 CG1 ILE 31 -9.279 78.899 -32.692 1.00 0.00 C ATOM 214 CD1 ILE 31 -8.897 77.762 -33.637 1.00 0.00 C ATOM 215 C ILE 31 -6.701 78.917 -29.910 1.00 0.00 C ATOM 216 O ILE 31 -6.503 79.989 -29.339 1.00 0.00 O ATOM 217 N ILE 32 -6.502 77.731 -29.310 1.00 0.00 N ATOM 218 CA ILE 32 -6.060 77.668 -27.951 1.00 0.00 C ATOM 219 CB ILE 32 -5.923 76.259 -27.445 1.00 0.00 C ATOM 220 CG2 ILE 32 -4.846 75.538 -28.272 1.00 0.00 C ATOM 221 CG1 ILE 32 -5.669 76.256 -25.928 1.00 0.00 C ATOM 222 CD1 ILE 32 -5.824 74.879 -25.284 1.00 0.00 C ATOM 223 C ILE 32 -4.729 78.346 -27.859 1.00 0.00 C ATOM 224 O ILE 32 -4.476 79.090 -26.917 1.00 0.00 O ATOM 225 N ASP 33 -3.840 78.115 -28.842 1.00 0.00 N ATOM 226 CA ASP 33 -2.535 78.708 -28.790 1.00 0.00 C ATOM 227 CB ASP 33 -1.639 78.263 -29.957 1.00 0.00 C ATOM 228 CG ASP 33 -1.316 76.790 -29.752 1.00 0.00 C ATOM 229 OD1 ASP 33 -1.254 76.352 -28.572 1.00 0.00 O ATOM 230 OD2 ASP 33 -1.132 76.080 -30.777 1.00 0.00 O ATOM 231 C ASP 33 -2.653 80.204 -28.849 1.00 0.00 C ATOM 232 O ASP 33 -2.009 80.909 -28.075 1.00 0.00 O ATOM 233 N ILE 34 -3.498 80.737 -29.753 1.00 0.00 N ATOM 234 CA ILE 34 -3.603 82.166 -29.870 1.00 0.00 C ATOM 235 CB ILE 34 -4.476 82.634 -31.001 1.00 0.00 C ATOM 236 CG2 ILE 34 -4.880 84.086 -30.701 1.00 0.00 C ATOM 237 CG1 ILE 34 -3.752 82.480 -32.351 1.00 0.00 C ATOM 238 CD1 ILE 34 -3.435 81.045 -32.746 1.00 0.00 C ATOM 239 C ILE 34 -4.127 82.748 -28.598 1.00 0.00 C ATOM 240 O ILE 34 -3.630 83.773 -28.132 1.00 0.00 O ATOM 241 N VAL 35 -5.156 82.119 -28.008 1.00 0.00 N ATOM 242 CA VAL 35 -5.709 82.611 -26.780 1.00 0.00 C ATOM 243 CB VAL 35 -6.855 81.778 -26.304 1.00 0.00 C ATOM 244 CG1 VAL 35 -7.389 82.371 -24.990 1.00 0.00 C ATOM 245 CG2 VAL 35 -7.887 81.676 -27.438 1.00 0.00 C ATOM 246 C VAL 35 -4.648 82.508 -25.737 1.00 0.00 C ATOM 247 O VAL 35 -4.449 83.416 -24.930 1.00 0.00 O ATOM 248 N LYS 36 -3.922 81.378 -25.786 1.00 0.00 N ATOM 249 CA LYS 36 -2.885 80.948 -24.891 1.00 0.00 C ATOM 250 CB LYS 36 -2.324 79.573 -25.288 1.00 0.00 C ATOM 251 CG LYS 36 -1.292 78.999 -24.313 1.00 0.00 C ATOM 252 CD LYS 36 -1.020 77.509 -24.533 1.00 0.00 C ATOM 253 CE LYS 36 0.098 76.946 -23.655 1.00 0.00 C ATOM 254 NZ LYS 36 1.413 77.426 -24.138 1.00 0.00 N ATOM 255 C LYS 36 -1.787 81.941 -24.951 1.00 0.00 C ATOM 256 O LYS 36 -1.030 82.113 -23.996 1.00 0.00 O ATOM 257 N GLU 37 -1.696 82.651 -26.083 1.00 0.00 N ATOM 258 CA GLU 37 -0.659 83.612 -26.277 1.00 0.00 C ATOM 259 CB GLU 37 -0.744 84.353 -27.613 1.00 0.00 C ATOM 260 CG GLU 37 -0.294 83.474 -28.780 1.00 0.00 C ATOM 261 CD GLU 37 1.163 83.109 -28.532 1.00 0.00 C ATOM 262 OE1 GLU 37 1.857 83.897 -27.838 1.00 0.00 O ATOM 263 OE2 GLU 37 1.599 82.036 -29.027 1.00 0.00 O ATOM 264 C GLU 37 -0.726 84.594 -25.158 1.00 0.00 C ATOM 265 O GLU 37 0.265 85.267 -24.893 1.00 0.00 O ATOM 266 N LEU 38 -1.901 84.719 -24.500 1.00 0.00 N ATOM 267 CA LEU 38 -2.045 85.588 -23.364 1.00 0.00 C ATOM 268 CB LEU 38 -3.315 85.323 -22.541 1.00 0.00 C ATOM 269 CG LEU 38 -3.328 86.014 -21.161 1.00 0.00 C ATOM 270 CD1 LEU 38 -3.152 87.536 -21.257 1.00 0.00 C ATOM 271 CD2 LEU 38 -4.588 85.614 -20.380 1.00 0.00 C ATOM 272 C LEU 38 -0.902 85.373 -22.431 1.00 0.00 C ATOM 273 O LEU 38 -0.613 84.259 -21.993 1.00 0.00 O ATOM 274 N ARG 39 -0.218 86.490 -22.139 1.00 0.00 N ATOM 275 CA ARG 39 0.935 86.587 -21.301 1.00 0.00 C ATOM 276 CB ARG 39 2.234 86.370 -22.101 1.00 0.00 C ATOM 277 CG ARG 39 3.542 86.451 -21.311 1.00 0.00 C ATOM 278 CD ARG 39 4.770 86.498 -22.225 1.00 0.00 C ATOM 279 NE ARG 39 5.962 86.797 -21.383 1.00 0.00 N ATOM 280 CZ ARG 39 7.126 87.186 -21.981 1.00 0.00 C ATOM 281 NH1 ARG 39 7.187 87.301 -23.340 1.00 0.00 N ATOM 282 NH2 ARG 39 8.227 87.462 -21.222 1.00 0.00 N ATOM 283 C ARG 39 0.896 88.010 -20.858 1.00 0.00 C ATOM 284 O ARG 39 -0.120 88.677 -21.054 1.00 0.00 O ATOM 285 N ASP 40 1.964 88.512 -20.212 1.00 0.00 N ATOM 286 CA ASP 40 1.950 89.913 -19.924 1.00 0.00 C ATOM 287 CB ASP 40 3.236 90.416 -19.246 1.00 0.00 C ATOM 288 CG ASP 40 3.272 89.870 -17.825 1.00 0.00 C ATOM 289 OD1 ASP 40 2.527 88.892 -17.547 1.00 0.00 O ATOM 290 OD2 ASP 40 4.049 90.421 -17.002 1.00 0.00 O ATOM 291 C ASP 40 1.879 90.530 -21.279 1.00 0.00 C ATOM 292 O ASP 40 1.121 91.468 -21.521 1.00 0.00 O ATOM 293 N ASP 41 2.678 89.973 -22.207 1.00 0.00 N ATOM 294 CA ASP 41 2.637 90.371 -23.579 1.00 0.00 C ATOM 295 CB ASP 41 4.021 90.702 -24.163 1.00 0.00 C ATOM 296 CG ASP 41 4.555 91.945 -23.468 1.00 0.00 C ATOM 297 OD1 ASP 41 3.769 92.592 -22.727 1.00 0.00 O ATOM 298 OD2 ASP 41 5.758 92.261 -23.664 1.00 0.00 O ATOM 299 C ASP 41 2.153 89.161 -24.306 1.00 0.00 C ATOM 300 O ASP 41 2.917 88.220 -24.522 1.00 0.00 O ATOM 301 N GLY 42 0.868 89.133 -24.701 1.00 0.00 N ATOM 302 CA GLY 42 0.415 87.948 -25.366 1.00 0.00 C ATOM 303 C GLY 42 -0.935 88.203 -25.937 1.00 0.00 C ATOM 304 O GLY 42 -1.521 89.260 -25.715 1.00 0.00 O ATOM 305 N TYR 43 -1.473 87.227 -26.699 1.00 0.00 N ATOM 306 CA TYR 43 -2.733 87.514 -27.306 1.00 0.00 C ATOM 307 CB TYR 43 -3.199 86.477 -28.345 1.00 0.00 C ATOM 308 CG TYR 43 -2.418 86.737 -29.594 1.00 0.00 C ATOM 309 CD1 TYR 43 -2.712 87.835 -30.368 1.00 0.00 C ATOM 310 CD2 TYR 43 -1.413 85.900 -30.018 1.00 0.00 C ATOM 311 CE1 TYR 43 -2.006 88.083 -31.520 1.00 0.00 C ATOM 312 CE2 TYR 43 -0.699 86.141 -31.168 1.00 0.00 C ATOM 313 CZ TYR 43 -0.997 87.247 -31.922 1.00 0.00 C ATOM 314 OH TYR 43 -0.286 87.526 -33.107 1.00 0.00 O ATOM 315 C TYR 43 -3.793 87.712 -26.273 1.00 0.00 C ATOM 316 O TYR 43 -4.451 88.749 -26.276 1.00 0.00 O ATOM 317 N LYS 44 -3.966 86.769 -25.326 1.00 0.00 N ATOM 318 CA LYS 44 -4.962 86.995 -24.315 1.00 0.00 C ATOM 319 CB LYS 44 -4.766 88.338 -23.584 1.00 0.00 C ATOM 320 CG LYS 44 -5.743 88.605 -22.438 1.00 0.00 C ATOM 321 CD LYS 44 -5.325 89.778 -21.548 1.00 0.00 C ATOM 322 CE LYS 44 -6.391 90.185 -20.530 1.00 0.00 C ATOM 323 NZ LYS 44 -7.543 90.802 -21.226 1.00 0.00 N ATOM 324 C LYS 44 -6.331 86.983 -24.927 1.00 0.00 C ATOM 325 O LYS 44 -6.486 86.952 -26.146 1.00 0.00 O ATOM 326 N GLY 45 -7.370 86.968 -24.063 1.00 0.00 N ATOM 327 CA GLY 45 -8.734 87.024 -24.503 1.00 0.00 C ATOM 328 C GLY 45 -9.352 88.176 -23.776 1.00 0.00 C ATOM 329 O GLY 45 -8.844 88.586 -22.734 1.00 0.00 O ATOM 330 N PRO 46 -10.430 88.730 -24.272 1.00 0.00 N ATOM 331 CA PRO 46 -11.051 88.266 -25.483 1.00 0.00 C ATOM 332 CD PRO 46 -11.388 89.366 -23.381 1.00 0.00 C ATOM 333 CB PRO 46 -12.407 88.963 -25.549 1.00 0.00 C ATOM 334 CG PRO 46 -12.753 89.229 -24.074 1.00 0.00 C ATOM 335 C PRO 46 -10.188 88.525 -26.670 1.00 0.00 C ATOM 336 O PRO 46 -9.363 89.436 -26.613 1.00 0.00 O ATOM 337 N LEU 47 -10.331 87.715 -27.741 1.00 0.00 N ATOM 338 CA LEU 47 -9.500 87.967 -28.878 1.00 0.00 C ATOM 339 CB LEU 47 -8.219 87.111 -28.853 1.00 0.00 C ATOM 340 CG LEU 47 -7.126 87.508 -29.867 1.00 0.00 C ATOM 341 CD1 LEU 47 -5.868 86.660 -29.649 1.00 0.00 C ATOM 342 CD2 LEU 47 -7.605 87.430 -31.319 1.00 0.00 C ATOM 343 C LEU 47 -10.287 87.691 -30.127 1.00 0.00 C ATOM 344 O LEU 47 -10.980 86.680 -30.233 1.00 0.00 O ATOM 345 N LEU 48 -10.237 88.626 -31.102 1.00 0.00 N ATOM 346 CA LEU 48 -10.923 88.375 -32.334 1.00 0.00 C ATOM 347 CB LEU 48 -11.700 89.558 -32.947 1.00 0.00 C ATOM 348 CG LEU 48 -11.007 90.924 -32.959 1.00 0.00 C ATOM 349 CD1 LEU 48 -11.854 91.969 -33.705 1.00 0.00 C ATOM 350 CD2 LEU 48 -10.744 91.381 -31.527 1.00 0.00 C ATOM 351 C LEU 48 -9.929 87.879 -33.331 1.00 0.00 C ATOM 352 O LEU 48 -8.870 88.477 -33.522 1.00 0.00 O ATOM 353 N LEU 49 -10.250 86.737 -33.976 1.00 0.00 N ATOM 354 CA LEU 49 -9.347 86.150 -34.928 1.00 0.00 C ATOM 355 CB LEU 49 -8.955 84.692 -34.623 1.00 0.00 C ATOM 356 CG LEU 49 -8.106 84.522 -33.351 1.00 0.00 C ATOM 357 CD1 LEU 49 -6.765 85.265 -33.472 1.00 0.00 C ATOM 358 CD2 LEU 49 -8.897 84.898 -32.091 1.00 0.00 C ATOM 359 C LEU 49 -9.987 86.157 -36.283 1.00 0.00 C ATOM 360 O LEU 49 -11.143 85.767 -36.441 1.00 0.00 O ATOM 361 N ARG 50 -9.220 86.582 -37.308 1.00 0.00 N ATOM 362 CA ARG 50 -9.747 86.701 -38.636 1.00 0.00 C ATOM 363 CB ARG 50 -9.556 88.116 -39.192 1.00 0.00 C ATOM 364 CG ARG 50 -9.962 89.182 -38.174 1.00 0.00 C ATOM 365 CD ARG 50 -11.412 89.653 -38.248 1.00 0.00 C ATOM 366 NE ARG 50 -11.571 90.665 -37.164 1.00 0.00 N ATOM 367 CZ ARG 50 -12.139 91.879 -37.422 1.00 0.00 C ATOM 368 NH1 ARG 50 -12.599 92.173 -38.672 1.00 0.00 N ATOM 369 NH2 ARG 50 -12.229 92.805 -36.422 1.00 0.00 N ATOM 370 C ARG 50 -9.011 85.763 -39.540 1.00 0.00 C ATOM 371 O ARG 50 -7.832 85.460 -39.353 1.00 0.00 O ATOM 372 N PHE 51 -9.732 85.293 -40.567 1.00 0.00 N ATOM 373 CA PHE 51 -9.308 84.311 -41.521 1.00 0.00 C ATOM 374 CB PHE 51 -10.550 83.419 -41.684 1.00 0.00 C ATOM 375 CG PHE 51 -10.370 82.231 -42.531 1.00 0.00 C ATOM 376 CD1 PHE 51 -9.744 82.349 -43.729 1.00 0.00 C ATOM 377 CD2 PHE 51 -10.901 81.021 -42.163 1.00 0.00 C ATOM 378 CE1 PHE 51 -9.591 81.276 -44.563 1.00 0.00 C ATOM 379 CE2 PHE 51 -10.756 79.936 -42.989 1.00 0.00 C ATOM 380 CZ PHE 51 -10.098 80.065 -44.188 1.00 0.00 C ATOM 381 C PHE 51 -9.048 85.059 -42.809 1.00 0.00 C ATOM 382 O PHE 51 -9.991 85.412 -43.512 1.00 0.00 O ATOM 2578 N ALA 330 -14.497 86.347 -39.120 1.00 0.00 N ATOM 2579 CA ALA 330 -13.846 86.371 -37.839 1.00 0.00 C ATOM 2580 CB ALA 330 -13.466 87.759 -37.297 1.00 0.00 C ATOM 2581 C ALA 330 -14.631 85.670 -36.781 1.00 0.00 C ATOM 2582 O ALA 330 -15.833 85.436 -36.897 1.00 0.00 O ATOM 2583 N VAL 331 -13.904 85.290 -35.708 1.00 0.00 N ATOM 2584 CA VAL 331 -14.442 84.596 -34.575 1.00 0.00 C ATOM 2585 CB VAL 331 -13.982 83.170 -34.487 1.00 0.00 C ATOM 2586 CG1 VAL 331 -12.448 83.167 -34.365 1.00 0.00 C ATOM 2587 CG2 VAL 331 -14.691 82.495 -33.300 1.00 0.00 C ATOM 2588 C VAL 331 -13.938 85.287 -33.343 1.00 0.00 C ATOM 2589 O VAL 331 -12.875 85.908 -33.354 1.00 0.00 O ATOM 2590 N LEU 332 -14.716 85.219 -32.244 1.00 0.00 N ATOM 2591 CA LEU 332 -14.340 85.843 -31.005 1.00 0.00 C ATOM 2592 CB LEU 332 -15.475 86.711 -30.435 1.00 0.00 C ATOM 2593 CG LEU 332 -15.233 87.264 -29.023 1.00 0.00 C ATOM 2594 CD1 LEU 332 -14.063 88.244 -29.008 1.00 0.00 C ATOM 2595 CD2 LEU 332 -16.520 87.862 -28.431 1.00 0.00 C ATOM 2596 C LEU 332 -14.030 84.768 -30.009 1.00 0.00 C ATOM 2597 O LEU 332 -14.859 83.903 -29.734 1.00 0.00 O ATOM 2598 N ILE 333 -12.813 84.800 -29.427 1.00 0.00 N ATOM 2599 CA ILE 333 -12.435 83.809 -28.455 1.00 0.00 C ATOM 2600 CB ILE 333 -11.028 83.313 -28.599 1.00 0.00 C ATOM 2601 CG2 ILE 333 -10.698 82.530 -27.319 1.00 0.00 C ATOM 2602 CG1 ILE 333 -10.869 82.476 -29.877 1.00 0.00 C ATOM 2603 CD1 ILE 333 -11.144 83.234 -31.169 1.00 0.00 C ATOM 2604 C ILE 333 -12.541 84.414 -27.088 1.00 0.00 C ATOM 2605 O ILE 333 -12.079 85.531 -26.860 1.00 0.00 O ATOM 2606 N ALA 334 -13.183 83.688 -26.143 1.00 0.00 N ATOM 2607 CA ALA 334 -13.337 84.203 -24.809 1.00 0.00 C ATOM 2608 CB ALA 334 -14.729 84.807 -24.565 1.00 0.00 C ATOM 2609 C ALA 334 -13.130 83.081 -23.827 1.00 0.00 C ATOM 2610 O ALA 334 -13.494 81.935 -24.087 1.00 0.00 O ATOM 2611 N PRO 335 -12.493 83.390 -22.719 1.00 0.00 N ATOM 2612 CA PRO 335 -12.263 82.400 -21.690 1.00 0.00 C ATOM 2613 CD PRO 335 -11.411 84.360 -22.776 1.00 0.00 C ATOM 2614 CB PRO 335 -10.933 82.764 -21.029 1.00 0.00 C ATOM 2615 CG PRO 335 -10.695 84.229 -21.424 1.00 0.00 C ATOM 2616 C PRO 335 -13.385 82.302 -20.703 1.00 0.00 C ATOM 2617 O PRO 335 -14.069 83.300 -20.485 1.00 0.00 O ATOM 2618 N VAL 336 -13.577 81.133 -20.055 1.00 0.00 N ATOM 2619 CA VAL 336 -14.654 81.083 -19.106 1.00 0.00 C ATOM 2620 CB VAL 336 -15.452 79.805 -19.107 1.00 0.00 C ATOM 2621 CG1 VAL 336 -14.684 78.708 -18.362 1.00 0.00 C ATOM 2622 CG2 VAL 336 -16.844 80.098 -18.525 1.00 0.00 C ATOM 2623 C VAL 336 -14.087 81.337 -17.740 1.00 0.00 C ATOM 2624 O VAL 336 -13.127 80.696 -17.313 1.00 0.00 O ATOM 2625 N LEU 337 -14.601 82.394 -17.075 1.00 0.00 N ATOM 2626 CA LEU 337 -14.190 82.756 -15.746 1.00 0.00 C ATOM 2627 CB LEU 337 -14.575 84.201 -15.389 1.00 0.00 C ATOM 2628 CG LEU 337 -13.839 85.243 -16.250 1.00 0.00 C ATOM 2629 CD1 LEU 337 -14.243 86.675 -15.868 1.00 0.00 C ATOM 2630 CD2 LEU 337 -12.317 85.018 -16.206 1.00 0.00 C ATOM 2631 C LEU 337 -14.768 81.855 -14.694 1.00 0.00 C ATOM 2632 O LEU 337 -14.036 81.316 -13.865 1.00 0.00 O ATOM 2633 N GLU 338 -16.105 81.652 -14.699 1.00 0.00 N ATOM 2634 CA GLU 338 -16.674 80.854 -13.648 1.00 0.00 C ATOM 2635 CB GLU 338 -16.934 81.609 -12.332 1.00 0.00 C ATOM 2636 CG GLU 338 -15.665 81.954 -11.549 1.00 0.00 C ATOM 2637 CD GLU 338 -16.093 82.410 -10.161 1.00 0.00 C ATOM 2638 OE1 GLU 338 -17.328 82.447 -9.908 1.00 0.00 O ATOM 2639 OE2 GLU 338 -15.195 82.720 -9.333 1.00 0.00 O ATOM 2640 C GLU 338 -17.990 80.305 -14.081 1.00 0.00 C ATOM 2641 O GLU 338 -18.583 80.754 -15.059 1.00 0.00 O ATOM 2642 N LEU 339 -18.463 79.278 -13.344 1.00 0.00 N ATOM 2643 CA LEU 339 -19.727 78.669 -13.618 1.00 0.00 C ATOM 2644 CB LEU 339 -19.619 77.173 -13.971 1.00 0.00 C ATOM 2645 CG LEU 339 -18.693 76.869 -15.166 1.00 0.00 C ATOM 2646 CD1 LEU 339 -18.737 75.379 -15.542 1.00 0.00 C ATOM 2647 CD2 LEU 339 -18.978 77.795 -16.355 1.00 0.00 C ATOM 2648 C LEU 339 -20.516 78.736 -12.350 1.00 0.00 C ATOM 2649 O LEU 339 -19.985 78.468 -11.271 1.00 0.00 O ATOM 2650 N PHE 340 -21.802 79.129 -12.432 1.00 0.00 N ATOM 2651 CA PHE 340 -22.595 79.102 -11.242 1.00 0.00 C ATOM 2652 CB PHE 340 -22.684 80.440 -10.486 1.00 0.00 C ATOM 2653 CG PHE 340 -23.397 81.455 -11.310 1.00 0.00 C ATOM 2654 CD1 PHE 340 -24.770 81.526 -11.295 1.00 0.00 C ATOM 2655 CD2 PHE 340 -22.691 82.347 -12.084 1.00 0.00 C ATOM 2656 CE1 PHE 340 -25.433 82.469 -12.045 1.00 0.00 C ATOM 2657 CE2 PHE 340 -23.347 83.292 -12.837 1.00 0.00 C ATOM 2658 CZ PHE 340 -24.720 83.356 -12.815 1.00 0.00 C ATOM 2659 C PHE 340 -23.968 78.677 -11.629 1.00 0.00 C ATOM 2660 O PHE 340 -24.407 78.902 -12.756 1.00 0.00 O ATOM 2661 N SER 341 -24.685 78.019 -10.701 1.00 0.00 N ATOM 2662 CA SER 341 -25.990 77.583 -11.067 1.00 0.00 C ATOM 2663 CB SER 341 -26.103 76.056 -11.235 1.00 0.00 C ATOM 2664 OG SER 341 -25.285 75.620 -12.311 1.00 0.00 O ATOM 2665 C SER 341 -26.946 77.969 -10.004 1.00 0.00 C ATOM 2666 O SER 341 -26.662 77.867 -8.810 1.00 0.00 O ATOM 2667 N GLN 342 -28.107 78.464 -10.451 1.00 0.00 N ATOM 2668 CA GLN 342 -29.201 78.695 -9.569 1.00 0.00 C ATOM 2669 CB GLN 342 -30.108 79.860 -9.997 1.00 0.00 C ATOM 2670 CG GLN 342 -29.402 81.215 -9.929 1.00 0.00 C ATOM 2671 CD GLN 342 -30.391 82.283 -10.371 1.00 0.00 C ATOM 2672 OE1 GLN 342 -30.432 83.375 -9.805 1.00 0.00 O ATOM 2673 NE2 GLN 342 -31.205 81.967 -11.412 1.00 0.00 N ATOM 2674 C GLN 342 -29.947 77.419 -9.738 1.00 0.00 C ATOM 2675 O GLN 342 -29.508 76.575 -10.518 1.00 0.00 O ATOM 3420 N GLU 435 -6.341 89.569 -34.416 1.00 0.00 N ATOM 3421 CA GLU 435 -5.278 88.817 -35.029 1.00 0.00 C ATOM 3422 CB GLU 435 -4.857 87.611 -34.166 1.00 0.00 C ATOM 3423 CG GLU 435 -3.725 86.757 -34.735 1.00 0.00 C ATOM 3424 CD GLU 435 -3.431 85.672 -33.706 1.00 0.00 C ATOM 3425 OE1 GLU 435 -3.799 85.876 -32.520 1.00 0.00 O ATOM 3426 OE2 GLU 435 -2.835 84.628 -34.084 1.00 0.00 O ATOM 3427 C GLU 435 -5.754 88.300 -36.357 1.00 0.00 C ATOM 3428 O GLU 435 -6.889 87.850 -36.500 1.00 0.00 O ATOM 3429 N VAL 436 -4.873 88.358 -37.377 1.00 0.00 N ATOM 3430 CA VAL 436 -5.201 87.897 -38.697 1.00 0.00 C ATOM 3431 CB VAL 436 -4.897 88.951 -39.719 1.00 0.00 C ATOM 3432 CG1 VAL 436 -5.125 88.393 -41.122 1.00 0.00 C ATOM 3433 CG2 VAL 436 -5.778 90.171 -39.409 1.00 0.00 C ATOM 3434 C VAL 436 -4.352 86.697 -38.958 1.00 0.00 C ATOM 3435 O VAL 436 -3.142 86.722 -38.741 1.00 0.00 O ATOM 3436 N GLN 437 -4.959 85.590 -39.430 1.00 0.00 N ATOM 3437 CA GLN 437 -4.113 84.446 -39.583 1.00 0.00 C ATOM 3438 CB GLN 437 -4.324 83.412 -38.459 1.00 0.00 C ATOM 3439 CG GLN 437 -3.901 84.036 -37.120 1.00 0.00 C ATOM 3440 CD GLN 437 -4.223 83.140 -35.928 1.00 0.00 C ATOM 3441 OE1 GLN 437 -5.264 83.289 -35.288 1.00 0.00 O ATOM 3442 NE2 GLN 437 -3.285 82.219 -35.583 1.00 0.00 N ATOM 3443 C GLN 437 -4.237 83.876 -40.947 1.00 0.00 C ATOM 3444 O GLN 437 -5.331 83.695 -41.470 1.00 0.00 O ATOM 3445 N GLU 438 -3.081 83.596 -41.578 1.00 0.00 N ATOM 3446 CA GLU 438 -3.113 83.043 -42.893 1.00 0.00 C ATOM 3447 CB GLU 438 -2.832 84.078 -43.996 1.00 0.00 C ATOM 3448 CG GLU 438 -1.463 84.747 -43.883 1.00 0.00 C ATOM 3449 CD GLU 438 -1.329 85.735 -45.033 1.00 0.00 C ATOM 3450 OE1 GLU 438 -2.353 85.976 -45.728 1.00 0.00 O ATOM 3451 OE2 GLU 438 -0.203 86.264 -45.231 1.00 0.00 O ATOM 3452 C GLU 438 -2.075 81.970 -42.989 1.00 0.00 C ATOM 3453 O GLU 438 -0.885 82.217 -42.802 1.00 0.00 O ATOM 3454 N ARG 439 -2.530 80.740 -43.300 1.00 0.00 N ATOM 3455 CA ARG 439 -1.671 79.610 -43.498 1.00 0.00 C ATOM 3456 CB ARG 439 -0.931 79.600 -44.850 1.00 0.00 C ATOM 3457 CG ARG 439 -0.029 78.372 -45.014 1.00 0.00 C ATOM 3458 CD ARG 439 0.743 78.307 -46.333 1.00 0.00 C ATOM 3459 NE ARG 439 1.674 77.147 -46.228 1.00 0.00 N ATOM 3460 CZ ARG 439 1.954 76.381 -47.323 1.00 0.00 C ATOM 3461 NH1 ARG 439 1.368 76.660 -48.522 1.00 0.00 N ATOM 3462 NH2 ARG 439 2.819 75.329 -47.213 1.00 0.00 N ATOM 3463 C ARG 439 -0.646 79.506 -42.410 1.00 0.00 C ATOM 3464 O ARG 439 0.549 79.658 -42.667 1.00 0.00 O ATOM 3465 N TYR 440 -1.077 79.253 -41.155 1.00 0.00 N ATOM 3466 CA TYR 440 -0.087 79.048 -40.130 1.00 0.00 C ATOM 3467 CB TYR 440 0.909 77.934 -40.547 1.00 0.00 C ATOM 3468 CG TYR 440 1.950 77.701 -39.501 1.00 0.00 C ATOM 3469 CD1 TYR 440 1.675 76.966 -38.371 1.00 0.00 C ATOM 3470 CD2 TYR 440 3.215 78.220 -39.662 1.00 0.00 C ATOM 3471 CE1 TYR 440 2.647 76.763 -37.417 1.00 0.00 C ATOM 3472 CE2 TYR 440 4.189 78.022 -38.714 1.00 0.00 C ATOM 3473 CZ TYR 440 3.904 77.291 -37.587 1.00 0.00 C ATOM 3474 OH TYR 440 4.902 77.084 -36.609 1.00 0.00 O ATOM 3475 C TYR 440 0.656 80.329 -39.868 1.00 0.00 C ATOM 3476 O TYR 440 1.606 80.370 -39.088 1.00 0.00 O ATOM 3477 N LEU 441 0.200 81.452 -40.444 1.00 0.00 N ATOM 3478 CA LEU 441 0.933 82.669 -40.218 1.00 0.00 C ATOM 3479 CB LEU 441 1.292 83.384 -41.543 1.00 0.00 C ATOM 3480 CG LEU 441 2.114 84.692 -41.454 1.00 0.00 C ATOM 3481 CD1 LEU 441 2.526 85.155 -42.861 1.00 0.00 C ATOM 3482 CD2 LEU 441 1.375 85.816 -40.711 1.00 0.00 C ATOM 3483 C LEU 441 0.060 83.546 -39.375 1.00 0.00 C ATOM 3484 O LEU 441 -1.159 83.535 -39.523 1.00 0.00 O ATOM 3485 N VAL 442 0.665 84.308 -38.437 1.00 0.00 N ATOM 3486 CA VAL 442 -0.115 85.161 -37.586 1.00 0.00 C ATOM 3487 CB VAL 442 -0.001 84.801 -36.135 1.00 0.00 C ATOM 3488 CG1 VAL 442 -0.724 85.876 -35.308 1.00 0.00 C ATOM 3489 CG2 VAL 442 -0.555 83.379 -35.936 1.00 0.00 C ATOM 3490 C VAL 442 0.346 86.581 -37.728 1.00 0.00 C ATOM 3491 O VAL 442 1.537 86.857 -37.859 1.00 0.00 O ATOM 3492 N ASN 443 -0.622 87.523 -37.721 1.00 0.00 N ATOM 3493 CA ASN 443 -0.319 88.924 -37.797 1.00 0.00 C ATOM 3494 CB ASN 443 -0.658 89.549 -39.161 1.00 0.00 C ATOM 3495 CG ASN 443 0.273 88.933 -40.197 1.00 0.00 C ATOM 3496 OD1 ASN 443 -0.165 88.210 -41.091 1.00 0.00 O ATOM 3497 ND2 ASN 443 1.597 89.220 -40.074 1.00 0.00 N ATOM 3498 C ASN 443 -1.174 89.600 -36.772 1.00 0.00 C ATOM 3499 O ASN 443 -2.356 89.292 -36.628 1.00 0.00 O ATOM 3500 N PHE 444 -0.589 90.556 -36.028 1.00 0.00 N ATOM 3501 CA PHE 444 -1.307 91.230 -34.988 1.00 0.00 C ATOM 3502 CB PHE 444 -0.345 91.533 -33.828 1.00 0.00 C ATOM 3503 CG PHE 444 -1.085 91.903 -32.597 1.00 0.00 C ATOM 3504 CD1 PHE 444 -1.897 90.982 -31.986 1.00 0.00 C ATOM 3505 CD2 PHE 444 -0.927 93.136 -32.022 1.00 0.00 C ATOM 3506 CE1 PHE 444 -2.584 91.279 -30.834 1.00 0.00 C ATOM 3507 CE2 PHE 444 -1.608 93.438 -30.870 1.00 0.00 C ATOM 3508 CZ PHE 444 -2.441 92.522 -30.273 1.00 0.00 C ATOM 3509 C PHE 444 -1.800 92.511 -35.589 1.00 0.00 C ATOM 3510 O PHE 444 -1.053 93.480 -35.710 1.00 0.00 O ATOM 3511 N SER 445 -3.078 92.518 -36.020 1.00 0.00 N ATOM 3512 CA SER 445 -3.678 93.653 -36.667 1.00 0.00 C ATOM 3513 CB SER 445 -4.931 93.284 -37.475 1.00 0.00 C ATOM 3514 OG SER 445 -4.550 92.539 -38.621 1.00 0.00 O ATOM 3515 C SER 445 -4.051 94.732 -35.702 1.00 0.00 C ATOM 3516 O SER 445 -3.970 95.910 -36.042 1.00 0.00 O ATOM 3517 N LEU 446 -4.521 94.383 -34.490 1.00 0.00 N ATOM 3518 CA LEU 446 -4.881 95.437 -33.585 1.00 0.00 C ATOM 3519 CB LEU 446 -6.398 95.675 -33.479 1.00 0.00 C ATOM 3520 CG LEU 446 -7.051 96.133 -34.797 1.00 0.00 C ATOM 3521 CD1 LEU 446 -6.979 95.035 -35.871 1.00 0.00 C ATOM 3522 CD2 LEU 446 -8.480 96.647 -34.563 1.00 0.00 C ATOM 3523 C LEU 446 -4.398 95.062 -32.225 1.00 0.00 C ATOM 3524 O LEU 446 -4.574 93.930 -31.779 1.00 0.00 O ATOM 3525 N PHE 447 -3.773 96.027 -31.526 1.00 0.00 N ATOM 3526 CA PHE 447 -3.253 95.773 -30.217 1.00 0.00 C ATOM 3527 CB PHE 447 -2.177 96.779 -29.771 1.00 0.00 C ATOM 3528 CG PHE 447 -0.974 96.598 -30.630 1.00 0.00 C ATOM 3529 CD1 PHE 447 -0.904 97.185 -31.873 1.00 0.00 C ATOM 3530 CD2 PHE 447 0.091 95.847 -30.188 1.00 0.00 C ATOM 3531 CE1 PHE 447 0.208 97.023 -32.664 1.00 0.00 C ATOM 3532 CE2 PHE 447 1.207 95.682 -30.974 1.00 0.00 C ATOM 3533 CZ PHE 447 1.265 96.266 -32.216 1.00 0.00 C ATOM 3534 C PHE 447 -4.368 95.871 -29.235 1.00 0.00 C ATOM 3535 O PHE 447 -5.341 96.589 -29.458 1.00 0.00 O ATOM 3536 N GLN 448 -4.255 95.124 -28.118 1.00 0.00 N ATOM 3537 CA GLN 448 -5.245 95.241 -27.092 1.00 0.00 C ATOM 3538 CB GLN 448 -4.998 94.339 -25.868 1.00 0.00 C ATOM 3539 CG GLN 448 -6.061 94.476 -24.776 1.00 0.00 C ATOM 3540 CD GLN 448 -5.681 93.558 -23.622 1.00 0.00 C ATOM 3541 OE1 GLN 448 -5.420 92.369 -23.803 1.00 0.00 O ATOM 3542 NE2 GLN 448 -5.642 94.131 -22.390 1.00 0.00 N ATOM 3543 C GLN 448 -5.118 96.647 -26.608 1.00 0.00 C ATOM 3544 O GLN 448 -4.013 97.181 -26.518 1.00 0.00 O ATOM 3545 N SER 449 -6.254 97.295 -26.296 1.00 0.00 N ATOM 3546 CA SER 449 -6.198 98.657 -25.852 1.00 0.00 C ATOM 3547 CB SER 449 -7.545 99.395 -25.952 1.00 0.00 C ATOM 3548 OG SER 449 -7.959 99.474 -27.309 1.00 0.00 O ATOM 3549 C SER 449 -5.780 98.659 -24.420 1.00 0.00 C ATOM 3550 O SER 449 -5.714 97.611 -23.780 1.00 0.00 O ATOM 3551 N MET 450 -5.453 99.861 -23.902 1.00 0.00 N ATOM 3552 CA MET 450 -5.037 100.032 -22.542 1.00 0.00 C ATOM 3553 CB MET 450 -3.605 100.579 -22.416 1.00 0.00 C ATOM 3554 CG MET 450 -3.441 102.003 -22.954 1.00 0.00 C ATOM 3555 SD MET 450 -1.780 102.706 -22.721 1.00 0.00 S ATOM 3556 CE MET 450 -0.967 101.596 -23.903 1.00 0.00 C ATOM 3557 C MET 450 -5.972 101.033 -21.932 1.00 0.00 C ATOM 3558 O MET 450 -6.620 101.795 -22.646 1.00 0.00 O ATOM 3559 N PRO 451 -6.092 101.035 -20.629 1.00 0.00 N ATOM 3560 CA PRO 451 -6.992 101.934 -19.958 1.00 0.00 C ATOM 3561 CD PRO 451 -5.029 100.578 -19.748 1.00 0.00 C ATOM 3562 CB PRO 451 -6.746 101.711 -18.469 1.00 0.00 C ATOM 3563 CG PRO 451 -5.256 101.328 -18.424 1.00 0.00 C ATOM 3564 C PRO 451 -6.690 103.354 -20.322 1.00 0.00 C ATOM 3565 O PRO 451 -7.615 104.163 -20.367 1.00 0.00 O ATOM 3566 N ASP 452 -5.409 103.680 -20.570 1.00 0.00 N ATOM 3567 CA ASP 452 -5.013 105.029 -20.854 1.00 0.00 C ATOM 3568 CB ASP 452 -3.498 105.164 -21.082 1.00 0.00 C ATOM 3569 CG ASP 452 -2.784 104.877 -19.768 1.00 0.00 C ATOM 3570 OD1 ASP 452 -3.462 104.895 -18.706 1.00 0.00 O ATOM 3571 OD2 ASP 452 -1.548 104.634 -19.810 1.00 0.00 O ATOM 3572 C ASP 452 -5.686 105.460 -22.114 1.00 0.00 C ATOM 3573 O ASP 452 -6.135 106.598 -22.237 1.00 0.00 O ATOM 3574 N PHE 453 -5.794 104.533 -23.080 1.00 0.00 N ATOM 3575 CA PHE 453 -6.343 104.850 -24.363 1.00 0.00 C ATOM 3576 CB PHE 453 -6.370 103.632 -25.302 1.00 0.00 C ATOM 3577 CG PHE 453 -7.035 104.051 -26.567 1.00 0.00 C ATOM 3578 CD1 PHE 453 -6.341 104.741 -27.535 1.00 0.00 C ATOM 3579 CD2 PHE 453 -8.359 103.749 -26.784 1.00 0.00 C ATOM 3580 CE1 PHE 453 -6.962 105.122 -28.701 1.00 0.00 C ATOM 3581 CE2 PHE 453 -8.985 104.127 -27.946 1.00 0.00 C ATOM 3582 CZ PHE 453 -8.287 104.818 -28.907 1.00 0.00 C ATOM 3583 C PHE 453 -7.747 105.331 -24.207 1.00 0.00 C ATOM 3584 O PHE 453 -8.126 106.347 -24.787 1.00 0.00 O ATOM 3585 N TRP 454 -8.561 104.622 -23.409 1.00 0.00 N ATOM 3586 CA TRP 454 -9.945 104.981 -23.293 1.00 0.00 C ATOM 3587 CB TRP 454 -10.764 103.949 -22.504 1.00 0.00 C ATOM 3588 CG TRP 454 -10.828 102.632 -23.238 1.00 0.00 C ATOM 3589 CD2 TRP 454 -11.385 102.487 -24.553 1.00 0.00 C ATOM 3590 CD1 TRP 454 -10.348 101.407 -22.882 1.00 0.00 C ATOM 3591 NE1 TRP 454 -10.578 100.502 -23.892 1.00 0.00 N ATOM 3592 CE2 TRP 454 -11.214 101.155 -24.928 1.00 0.00 C ATOM 3593 CE3 TRP 454 -11.983 103.391 -25.385 1.00 0.00 C ATOM 3594 CZ2 TRP 454 -11.638 100.705 -26.146 1.00 0.00 C ATOM 3595 CZ3 TRP 454 -12.418 102.932 -26.609 1.00 0.00 C ATOM 3596 CH2 TRP 454 -12.250 101.614 -26.981 1.00 0.00 C ATOM 3597 C TRP 454 -10.092 106.333 -22.659 1.00 0.00 C ATOM 3598 O TRP 454 -10.941 107.120 -23.074 1.00 0.00 O ATOM 3599 N GLY 455 -9.282 106.625 -21.625 1.00 0.00 N ATOM 3600 CA GLY 455 -9.313 107.859 -20.881 1.00 0.00 C ATOM 3601 C GLY 455 -8.864 109.030 -21.705 1.00 0.00 C ATOM 3602 O GLY 455 -9.334 110.150 -21.512 1.00 0.00 O ATOM 3603 N LEU 456 -7.934 108.800 -22.649 1.00 0.00 N ATOM 3604 CA LEU 456 -7.260 109.856 -23.352 1.00 0.00 C ATOM 3605 CB LEU 456 -6.236 109.288 -24.363 1.00 0.00 C ATOM 3606 CG LEU 456 -5.226 110.282 -24.992 1.00 0.00 C ATOM 3607 CD1 LEU 456 -4.290 109.541 -25.959 1.00 0.00 C ATOM 3608 CD2 LEU 456 -5.887 111.493 -25.673 1.00 0.00 C ATOM 3609 C LEU 456 -8.232 110.747 -24.069 1.00 0.00 C ATOM 3610 O LEU 456 -8.052 111.964 -24.058 1.00 0.00 O ATOM 3611 N GLU 457 -9.294 110.196 -24.685 1.00 0.00 N ATOM 3612 CA GLU 457 -10.171 111.008 -25.487 1.00 0.00 C ATOM 3613 CB GLU 457 -11.366 110.219 -26.054 1.00 0.00 C ATOM 3614 CG GLU 457 -12.195 111.010 -27.068 1.00 0.00 C ATOM 3615 CD GLU 457 -11.395 111.082 -28.362 1.00 0.00 C ATOM 3616 OE1 GLU 457 -10.287 110.481 -28.400 1.00 0.00 O ATOM 3617 OE2 GLU 457 -11.875 111.737 -29.325 1.00 0.00 O ATOM 3618 C GLU 457 -10.720 112.123 -24.655 1.00 0.00 C ATOM 3619 O GLU 457 -10.721 113.275 -25.089 1.00 0.00 O ATOM 3620 N GLN 458 -11.190 111.832 -23.429 1.00 0.00 N ATOM 3621 CA GLN 458 -11.670 112.921 -22.636 1.00 0.00 C ATOM 3622 CB GLN 458 -12.841 112.557 -21.705 1.00 0.00 C ATOM 3623 CG GLN 458 -14.143 112.236 -22.444 1.00 0.00 C ATOM 3624 CD GLN 458 -15.203 111.896 -21.405 1.00 0.00 C ATOM 3625 OE1 GLN 458 -16.327 112.390 -21.455 1.00 0.00 O ATOM 3626 NE2 GLN 458 -14.834 111.020 -20.432 1.00 0.00 N ATOM 3627 C GLN 458 -10.533 113.350 -21.776 1.00 0.00 C ATOM 3628 O GLN 458 -10.210 112.707 -20.780 1.00 0.00 O ATOM 3629 N ASN 459 -9.895 114.473 -22.145 1.00 0.00 N ATOM 3630 CA ASN 459 -8.785 114.952 -21.384 1.00 0.00 C ATOM 3631 CB ASN 459 -7.996 116.056 -22.107 1.00 0.00 C ATOM 3632 CG ASN 459 -6.776 116.397 -21.265 1.00 0.00 C ATOM 3633 OD1 ASN 459 -6.645 115.962 -20.123 1.00 0.00 O ATOM 3634 ND2 ASN 459 -5.852 117.211 -21.842 1.00 0.00 N ATOM 3635 C ASN 459 -9.350 115.554 -20.101 1.00 0.00 C ATOM 3636 O ASN 459 -9.959 114.789 -19.306 1.00 0.00 O ATOM 3637 OXT ASN 459 -9.164 116.783 -19.892 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 697 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.71 63.4 93 25.5 364 ARMSMC SECONDARY STRUCTURE . . 40.48 87.5 40 35.7 112 ARMSMC SURFACE . . . . . . . . 85.50 48.0 50 25.5 196 ARMSMC BURIED . . . . . . . . 51.20 81.4 43 25.6 168 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.18 34.1 41 25.0 164 ARMSSC1 RELIABLE SIDE CHAINS . 91.54 33.3 39 25.5 153 ARMSSC1 SECONDARY STRUCTURE . . 88.18 40.0 20 38.5 52 ARMSSC1 SURFACE . . . . . . . . 88.75 37.5 24 26.4 91 ARMSSC1 BURIED . . . . . . . . 94.50 29.4 17 23.3 73 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.66 34.2 38 27.5 138 ARMSSC2 RELIABLE SIDE CHAINS . 81.71 36.7 30 27.8 108 ARMSSC2 SECONDARY STRUCTURE . . 84.43 41.2 17 39.5 43 ARMSSC2 SURFACE . . . . . . . . 89.28 41.7 24 29.6 81 ARMSSC2 BURIED . . . . . . . . 90.29 21.4 14 24.6 57 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.05 45.5 11 17.2 64 ARMSSC3 RELIABLE SIDE CHAINS . 85.05 45.5 11 19.6 56 ARMSSC3 SECONDARY STRUCTURE . . 48.02 75.0 4 25.0 16 ARMSSC3 SURFACE . . . . . . . . 84.57 50.0 10 22.2 45 ARMSSC3 BURIED . . . . . . . . 89.73 0.0 1 5.3 19 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 122.41 0.0 8 50.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 122.41 0.0 8 50.0 16 ARMSSC4 SECONDARY STRUCTURE . . 125.80 0.0 3 75.0 4 ARMSSC4 SURFACE . . . . . . . . 130.31 0.0 7 53.8 13 ARMSSC4 BURIED . . . . . . . . 31.72 0.0 1 33.3 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.48 (Number of atoms: 85) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.48 85 46.4 183 CRMSCA CRN = ALL/NP . . . . . 0.1468 CRMSCA SECONDARY STRUCTURE . . 12.45 35 62.5 56 CRMSCA SURFACE . . . . . . . . 12.08 40 40.4 99 CRMSCA BURIED . . . . . . . . 12.82 45 53.6 84 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.55 419 46.4 903 CRMSMC SECONDARY STRUCTURE . . 12.50 175 62.9 278 CRMSMC SURFACE . . . . . . . . 12.14 198 40.4 490 CRMSMC BURIED . . . . . . . . 12.91 221 53.5 413 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.55 357 47.1 758 CRMSSC RELIABLE SIDE CHAINS . 14.44 305 46.2 660 CRMSSC SECONDARY STRUCTURE . . 15.47 152 65.2 233 CRMSSC SURFACE . . . . . . . . 12.95 185 42.6 434 CRMSSC BURIED . . . . . . . . 16.10 172 53.1 324 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.56 697 46.8 1490 CRMSALL SECONDARY STRUCTURE . . 14.08 292 63.9 457 CRMSALL SURFACE . . . . . . . . 12.54 345 41.6 830 CRMSALL BURIED . . . . . . . . 14.49 352 53.3 660 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.431 1.000 0.500 85 46.4 183 ERRCA SECONDARY STRUCTURE . . 9.982 1.000 0.500 35 62.5 56 ERRCA SURFACE . . . . . . . . 10.270 1.000 0.500 40 40.4 99 ERRCA BURIED . . . . . . . . 10.574 1.000 0.500 45 53.6 84 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.466 1.000 0.500 419 46.4 903 ERRMC SECONDARY STRUCTURE . . 10.055 1.000 0.500 175 62.9 278 ERRMC SURFACE . . . . . . . . 10.303 1.000 0.500 198 40.4 490 ERRMC BURIED . . . . . . . . 10.611 1.000 0.500 221 53.5 413 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.089 1.000 0.500 357 47.1 758 ERRSC RELIABLE SIDE CHAINS . 11.930 1.000 0.500 305 46.2 660 ERRSC SECONDARY STRUCTURE . . 12.122 1.000 0.500 152 65.2 233 ERRSC SURFACE . . . . . . . . 10.992 1.000 0.500 185 42.6 434 ERRSC BURIED . . . . . . . . 13.268 1.000 0.500 172 53.1 324 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.256 1.000 0.500 697 46.8 1490 ERRALL SECONDARY STRUCTURE . . 11.104 1.000 0.500 292 63.9 457 ERRALL SURFACE . . . . . . . . 10.646 1.000 0.500 345 41.6 830 ERRALL BURIED . . . . . . . . 11.854 1.000 0.500 352 53.3 660 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 12 56 85 183 DISTCA CA (P) 0.00 0.00 0.00 6.56 30.60 183 DISTCA CA (RMS) 0.00 0.00 0.00 4.22 7.00 DISTCA ALL (N) 0 0 4 87 416 697 1490 DISTALL ALL (P) 0.00 0.00 0.27 5.84 27.92 1490 DISTALL ALL (RMS) 0.00 0.00 2.52 4.19 7.01 DISTALL END of the results output