####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS127_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS127_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 47 555 - 601 4.96 11.02 LONGEST_CONTINUOUS_SEGMENT: 47 556 - 602 4.95 10.75 LCS_AVERAGE: 79.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 563 - 584 1.65 10.74 LCS_AVERAGE: 31.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 564 - 582 0.98 11.15 LCS_AVERAGE: 24.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 8 10 46 5 7 8 9 9 10 11 11 11 12 28 31 32 34 40 43 45 45 47 47 LCS_GDT S 555 S 555 8 10 47 5 7 8 9 9 10 11 11 11 12 13 14 20 23 35 38 45 45 47 47 LCS_GDT I 556 I 556 8 10 47 5 7 8 9 9 10 11 11 11 12 12 13 16 26 33 40 45 45 47 47 LCS_GDT L 557 L 557 8 10 47 5 7 8 9 9 10 11 11 11 12 12 12 12 13 13 16 20 28 35 43 LCS_GDT D 558 D 558 8 10 47 5 7 8 9 9 10 11 11 11 12 13 16 24 37 42 43 45 45 47 47 LCS_GDT T 559 T 559 8 10 47 5 7 8 9 9 10 19 32 36 37 38 41 42 42 43 43 45 45 47 47 LCS_GDT L 560 L 560 8 10 47 3 6 8 9 9 10 11 11 21 33 38 40 42 42 43 43 45 45 47 47 LCS_GDT E 561 E 561 8 10 47 3 7 8 9 9 10 11 11 11 12 14 33 39 41 43 43 45 45 47 47 LCS_GDT D 562 D 562 3 21 47 3 3 4 5 12 26 31 35 36 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 563 L 563 5 22 47 4 7 15 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT D 564 D 564 19 22 47 4 12 18 19 23 29 31 35 36 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT Y 565 Y 565 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT D 566 D 566 19 22 47 3 7 17 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT I 567 I 567 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT H 568 H 568 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT A 569 A 569 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT I 570 I 570 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT M 571 M 571 19 22 47 5 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT D 572 D 572 19 22 47 8 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT I 573 I 573 19 22 47 4 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 574 L 574 19 22 47 8 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT N 575 N 575 19 22 47 8 15 18 19 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT E 576 E 576 19 22 47 6 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT R 577 R 577 19 22 47 8 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT I 578 I 578 19 22 47 8 15 18 19 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT S 579 S 579 19 22 47 8 15 18 19 21 27 31 34 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT N 580 N 580 19 22 47 8 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT S 581 S 581 19 22 47 8 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT K 582 K 582 19 22 47 3 13 18 19 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 583 L 583 17 22 47 3 9 13 17 19 20 21 25 30 37 40 41 42 42 43 43 45 45 47 47 LCS_GDT V 584 V 584 14 22 47 3 10 13 18 20 24 30 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT N 585 N 585 17 21 47 3 10 16 18 20 24 29 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT D 586 D 586 17 21 47 7 14 16 18 21 24 30 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT K 587 K 587 17 21 47 7 14 16 18 22 24 30 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT Q 588 Q 588 17 21 47 7 14 16 18 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT K 589 K 589 17 21 47 7 14 16 18 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT K 590 K 590 17 21 47 7 14 16 18 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT H 591 H 591 17 21 47 9 14 16 18 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT I 592 I 592 17 21 47 7 14 16 18 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 593 L 593 17 21 47 9 11 16 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT G 594 G 594 17 21 47 9 14 16 18 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT E 595 E 595 17 21 47 9 14 16 18 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 596 L 596 17 21 47 9 14 16 18 22 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT Y 597 Y 597 17 21 47 9 14 16 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 598 L 598 17 21 47 9 14 16 18 22 27 31 35 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT F 599 F 599 17 21 47 9 14 16 18 22 24 29 34 37 39 40 41 42 42 43 43 45 45 47 47 LCS_GDT L 600 L 600 17 21 47 9 14 16 18 22 24 29 34 37 39 40 41 42 42 43 43 44 45 47 47 LCS_GDT N 601 N 601 17 21 47 9 14 16 18 22 24 29 34 37 39 40 41 42 42 43 43 44 45 47 47 LCS_GDT D 602 D 602 3 18 47 3 3 3 4 9 10 13 21 26 29 34 37 39 40 42 43 43 44 44 44 LCS_GDT N 603 N 603 3 5 46 3 3 3 4 5 5 7 12 14 16 20 23 28 31 33 37 40 41 42 43 LCS_GDT G 604 G 604 3 5 43 3 3 3 4 5 5 6 7 9 10 13 19 21 22 24 25 29 31 33 36 LCS_GDT Y 605 Y 605 3 4 25 3 3 3 4 5 5 6 8 9 10 12 13 15 17 18 19 20 23 24 29 LCS_GDT L 606 L 606 3 4 16 3 3 3 4 5 5 7 8 9 12 14 16 19 20 21 22 23 23 24 29 LCS_GDT K 607 K 607 3 4 16 3 3 3 3 4 5 7 8 9 12 15 17 19 20 22 22 23 23 24 29 LCS_GDT S 608 S 608 3 4 16 3 3 3 3 4 5 7 8 9 11 13 15 16 18 19 21 22 23 24 25 LCS_GDT I 609 I 609 0 4 16 0 0 3 3 4 5 5 7 8 10 12 15 16 18 18 21 22 23 24 25 LCS_AVERAGE LCS_A: 45.11 ( 24.68 31.57 79.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 15 18 19 23 29 31 35 37 39 40 41 42 42 43 43 45 45 47 47 GDT PERCENT_AT 16.07 26.79 32.14 33.93 41.07 51.79 55.36 62.50 66.07 69.64 71.43 73.21 75.00 75.00 76.79 76.79 80.36 80.36 83.93 83.93 GDT RMS_LOCAL 0.31 0.65 0.90 0.98 1.83 2.17 2.26 2.65 2.83 2.94 3.09 3.23 3.40 3.40 3.64 3.64 4.66 4.29 4.81 4.81 GDT RMS_ALL_AT 12.04 11.57 11.11 11.15 10.75 10.69 10.65 10.75 10.63 10.63 10.61 10.64 10.64 10.64 10.67 10.67 11.23 10.91 11.07 11.07 # Checking swapping # possible swapping detected: D 562 D 562 # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 572 D 572 # possible swapping detected: Y 597 Y 597 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 13.588 0 0.026 0.696 14.545 0.000 0.000 LGA S 555 S 555 13.945 0 0.037 0.613 17.340 0.000 0.000 LGA I 556 I 556 11.801 0 0.112 0.128 14.857 0.000 0.000 LGA L 557 L 557 15.036 0 0.176 0.411 21.751 0.000 0.000 LGA D 558 D 558 11.732 0 0.045 0.172 16.552 1.548 0.774 LGA T 559 T 559 6.379 0 0.124 1.171 8.108 16.190 16.871 LGA L 560 L 560 7.510 0 0.407 1.043 12.736 6.190 3.452 LGA E 561 E 561 9.653 0 0.582 1.005 14.091 3.810 1.693 LGA D 562 D 562 3.978 0 0.368 0.988 7.136 48.690 33.333 LGA L 563 L 563 2.481 0 0.515 1.343 6.045 45.595 43.393 LGA D 564 D 564 3.284 0 0.360 0.744 4.298 53.690 47.738 LGA Y 565 Y 565 3.021 0 0.209 1.210 12.538 51.786 25.675 LGA D 566 D 566 2.377 0 0.154 1.141 5.181 66.905 53.929 LGA I 567 I 567 1.937 0 0.065 0.752 3.968 77.143 68.333 LGA H 568 H 568 1.262 0 0.173 1.309 6.010 81.548 56.905 LGA A 569 A 569 1.394 0 0.087 0.092 1.936 85.952 83.333 LGA I 570 I 570 1.417 0 0.107 0.672 2.982 83.690 74.286 LGA M 571 M 571 2.321 0 0.046 0.854 5.481 66.786 50.774 LGA D 572 D 572 2.666 0 0.090 0.278 5.718 62.857 46.726 LGA I 573 I 573 2.266 0 0.068 1.499 4.937 75.119 58.571 LGA L 574 L 574 1.475 0 0.066 0.906 6.602 77.381 53.571 LGA N 575 N 575 3.272 0 0.030 0.966 5.938 52.024 41.964 LGA E 576 E 576 3.009 0 0.111 1.553 4.196 59.167 51.905 LGA R 577 R 577 0.366 0 0.107 0.984 2.469 90.595 83.290 LGA I 578 I 578 2.986 0 0.086 0.616 5.537 57.500 44.643 LGA S 579 S 579 4.106 0 0.054 0.259 5.999 45.119 38.889 LGA N 580 N 580 2.489 0 0.144 0.524 5.580 71.190 51.726 LGA S 581 S 581 0.897 0 0.062 0.745 4.206 83.810 74.206 LGA K 582 K 582 2.217 0 0.633 1.144 8.113 51.786 43.492 LGA L 583 L 583 6.850 0 0.499 1.398 12.313 20.595 10.655 LGA V 584 V 584 4.011 0 0.037 0.429 5.002 32.976 36.531 LGA N 585 N 585 4.151 0 0.046 1.074 4.432 45.238 42.738 LGA D 586 D 586 4.024 0 0.110 0.987 5.035 41.905 36.012 LGA K 587 K 587 3.842 0 0.087 1.415 5.571 46.667 41.005 LGA Q 588 Q 588 1.750 0 0.031 0.932 2.737 75.119 75.926 LGA K 589 K 589 1.425 0 0.036 0.501 7.974 81.429 53.968 LGA K 590 K 590 1.848 0 0.086 0.967 6.874 72.857 47.989 LGA H 591 H 591 2.271 0 0.038 1.626 3.374 66.786 65.190 LGA I 592 I 592 1.703 0 0.158 1.204 4.542 75.000 67.738 LGA L 593 L 593 1.906 0 0.150 1.007 4.480 70.833 63.393 LGA G 594 G 594 1.916 0 0.121 0.121 2.348 68.810 68.810 LGA E 595 E 595 2.928 0 0.200 0.962 3.680 53.810 51.005 LGA L 596 L 596 3.314 0 0.144 0.940 3.314 50.000 50.893 LGA Y 597 Y 597 2.821 0 0.105 1.407 7.861 51.905 49.444 LGA L 598 L 598 3.531 0 0.034 1.412 5.928 42.262 40.893 LGA F 599 F 599 5.212 0 0.126 0.180 6.077 25.476 28.874 LGA L 600 L 600 5.563 0 0.209 0.631 7.220 18.690 22.440 LGA N 601 N 601 5.511 0 0.125 1.011 8.991 14.405 16.488 LGA D 602 D 602 11.181 0 0.498 1.259 13.985 0.714 0.357 LGA N 603 N 603 17.163 0 0.674 1.171 20.552 0.000 0.000 LGA G 604 G 604 18.966 0 0.315 0.315 22.677 0.000 0.000 LGA Y 605 Y 605 23.131 0 0.565 1.350 26.929 0.000 0.000 LGA L 606 L 606 27.130 0 0.636 0.919 30.018 0.000 0.000 LGA K 607 K 607 29.142 0 0.197 1.263 32.654 0.000 0.000 LGA S 608 S 608 31.064 0 0.659 0.646 31.732 0.000 0.000 LGA I 609 I 609 33.795 0 0.519 0.451 36.298 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 10.014 9.970 10.410 42.349 36.068 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 35 2.65 50.000 48.180 1.274 LGA_LOCAL RMSD: 2.648 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.754 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 10.014 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.008558 * X + 0.935128 * Y + -0.354207 * Z + -17.866110 Y_new = 0.971216 * X + -0.076551 * Y + -0.225565 * Z + 85.096855 Z_new = -0.238048 * X + -0.345941 * Y + -0.907556 * Z + 37.222179 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.579607 0.240355 -2.777416 [DEG: 90.5048 13.7713 -159.1342 ] ZXZ: -1.003743 2.708223 -2.538888 [DEG: -57.5103 155.1698 -145.4675 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS127_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS127_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 35 2.65 48.180 10.01 REMARK ---------------------------------------------------------- MOLECULE T0547TS127_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT 1TWI_A ATOM 4430 N GLN 554 -21.859 95.807 -22.468 1.00 0.00 N ATOM 4431 CA GLN 554 -20.678 96.433 -23.103 1.00 0.00 C ATOM 4432 C GLN 554 -19.862 95.411 -23.860 1.00 0.00 C ATOM 4433 O GLN 554 -19.817 94.202 -23.551 1.00 0.00 O ATOM 4434 CB GLN 554 -19.811 97.174 -22.156 1.00 0.00 C ATOM 4435 CG GLN 554 -18.971 98.269 -22.696 1.00 0.00 C ATOM 4436 CD GLN 554 -18.342 99.193 -21.687 1.00 0.00 C ATOM 4437 OE1 GLN 554 -18.831 99.642 -20.628 1.00 0.00 O ATOM 4438 NE2 GLN 554 -17.060 99.509 -21.994 1.00 0.00 N ATOM 4439 N SER 555 -19.322 95.920 -24.941 1.00 0.00 N ATOM 4440 CA SER 555 -18.449 95.200 -25.829 1.00 0.00 C ATOM 4441 C SER 555 -17.098 95.919 -25.818 1.00 0.00 C ATOM 4442 O SER 555 -16.940 97.056 -25.356 1.00 0.00 O ATOM 4443 CB SER 555 -19.045 95.147 -27.266 1.00 0.00 C ATOM 4444 OG SER 555 -18.260 94.365 -28.202 1.00 0.00 O ATOM 4445 N ILE 556 -16.067 95.151 -26.181 1.00 0.00 N ATOM 4446 CA ILE 556 -14.714 95.669 -26.336 1.00 0.00 C ATOM 4447 C ILE 556 -14.777 97.052 -27.060 1.00 0.00 C ATOM 4448 O ILE 556 -13.873 97.831 -26.831 1.00 0.00 O ATOM 4449 CB ILE 556 -13.809 94.641 -27.043 1.00 0.00 C ATOM 4450 CG1 ILE 556 -13.621 93.391 -26.183 1.00 0.00 C ATOM 4451 CG2 ILE 556 -12.424 95.269 -27.328 1.00 0.00 C ATOM 4452 CD1 ILE 556 -13.038 92.189 -26.896 1.00 0.00 C ATOM 4453 N LEU 557 -15.468 97.159 -28.186 1.00 0.00 N ATOM 4454 CA LEU 557 -15.675 98.388 -28.963 1.00 0.00 C ATOM 4455 C LEU 557 -15.971 99.592 -27.984 1.00 0.00 C ATOM 4456 O LEU 557 -15.015 100.285 -27.655 1.00 0.00 O ATOM 4457 CB LEU 557 -16.826 98.055 -29.957 1.00 0.00 C ATOM 4458 CG LEU 557 -17.283 99.281 -30.783 1.00 0.00 C ATOM 4459 CD1 LEU 557 -16.223 99.665 -31.794 1.00 0.00 C ATOM 4460 CD2 LEU 557 -18.632 98.945 -31.436 1.00 0.00 C ATOM 4461 N ASP 558 -17.038 99.416 -27.229 1.00 0.00 N ATOM 4462 CA ASP 558 -17.469 100.317 -26.211 1.00 0.00 C ATOM 4463 C ASP 558 -16.343 100.612 -25.158 1.00 0.00 C ATOM 4464 O ASP 558 -16.165 101.805 -24.884 1.00 0.00 O ATOM 4465 CB ASP 558 -18.612 99.599 -25.493 1.00 0.00 C ATOM 4466 CG ASP 558 -19.957 99.634 -26.210 1.00 0.00 C ATOM 4467 OD1 ASP 558 -20.430 100.706 -26.573 1.00 0.00 O ATOM 4468 OD2 ASP 558 -20.550 98.566 -26.409 1.00 0.00 O ATOM 4469 N THR 559 -15.369 99.677 -24.933 1.00 0.00 N ATOM 4470 CA THR 559 -14.357 99.795 -23.933 1.00 0.00 C ATOM 4471 C THR 559 -13.754 101.252 -24.000 1.00 0.00 C ATOM 4472 O THR 559 -13.132 101.634 -23.006 1.00 0.00 O ATOM 4473 CB THR 559 -13.242 98.700 -24.064 1.00 0.00 C ATOM 4474 OG1 THR 559 -12.282 98.858 -25.042 1.00 0.00 O ATOM 4475 CG2 THR 559 -13.823 97.311 -23.788 1.00 0.00 C ATOM 4476 N LEU 560 -13.154 101.520 -25.138 1.00 0.00 N ATOM 4477 CA LEU 560 -12.652 102.817 -25.376 1.00 0.00 C ATOM 4478 C LEU 560 -13.241 103.300 -26.762 1.00 0.00 C ATOM 4479 O LEU 560 -12.453 103.886 -27.503 1.00 0.00 O ATOM 4480 CB LEU 560 -11.122 102.726 -25.314 1.00 0.00 C ATOM 4481 CG LEU 560 -10.363 101.712 -26.113 1.00 0.00 C ATOM 4482 CD1 LEU 560 -10.707 101.708 -27.574 1.00 0.00 C ATOM 4483 CD2 LEU 560 -8.853 102.099 -26.011 1.00 0.00 C ATOM 4484 N GLU 561 -14.568 103.611 -26.827 1.00 0.00 N ATOM 4485 CA GLU 561 -15.088 104.058 -28.137 1.00 0.00 C ATOM 4486 C GLU 561 -15.581 105.510 -28.025 1.00 0.00 C ATOM 4487 O GLU 561 -16.598 105.811 -27.410 1.00 0.00 O ATOM 4488 CB GLU 561 -16.113 103.081 -28.714 1.00 0.00 C ATOM 4489 CG GLU 561 -15.578 102.304 -29.913 1.00 0.00 C ATOM 4490 CD GLU 561 -15.381 103.102 -31.227 1.00 0.00 C ATOM 4491 OE1 GLU 561 -14.620 102.630 -32.169 1.00 0.00 O ATOM 4492 OE2 GLU 561 -15.977 104.233 -31.412 1.00 0.00 O ATOM 4493 N ASP 562 -14.790 106.416 -28.557 1.00 0.00 N ATOM 4494 CA ASP 562 -14.976 107.892 -28.525 1.00 0.00 C ATOM 4495 C ASP 562 -15.231 108.470 -27.067 1.00 0.00 C ATOM 4496 O ASP 562 -16.230 109.176 -26.887 1.00 0.00 O ATOM 4497 CB ASP 562 -16.063 108.273 -29.569 1.00 0.00 C ATOM 4498 CG ASP 562 -16.291 109.780 -29.775 1.00 0.00 C ATOM 4499 OD1 ASP 562 -15.680 110.379 -30.682 1.00 0.00 O ATOM 4500 OD2 ASP 562 -17.106 110.394 -29.033 1.00 0.00 O ATOM 4501 N LEU 563 -14.493 108.048 -25.993 1.00 0.00 N ATOM 4502 CA LEU 563 -14.704 108.666 -24.686 1.00 0.00 C ATOM 4503 C LEU 563 -13.405 109.442 -24.381 1.00 0.00 C ATOM 4504 O LEU 563 -12.360 108.804 -24.112 1.00 0.00 O ATOM 4505 CB LEU 563 -14.841 107.607 -23.574 1.00 0.00 C ATOM 4506 CG LEU 563 -15.083 106.136 -23.898 1.00 0.00 C ATOM 4507 CD1 LEU 563 -16.399 105.990 -24.649 1.00 0.00 C ATOM 4508 CD2 LEU 563 -13.908 105.560 -24.719 1.00 0.00 C ATOM 4509 N ASP 564 -13.480 110.754 -24.391 1.00 0.00 N ATOM 4510 CA ASP 564 -12.298 111.514 -24.094 1.00 0.00 C ATOM 4511 C ASP 564 -12.366 112.042 -22.630 1.00 0.00 C ATOM 4512 O ASP 564 -13.197 112.914 -22.304 1.00 0.00 O ATOM 4513 CB ASP 564 -12.249 112.658 -25.104 1.00 0.00 C ATOM 4514 CG ASP 564 -12.615 112.366 -26.554 1.00 0.00 C ATOM 4515 OD1 ASP 564 -12.486 111.206 -27.091 1.00 0.00 O ATOM 4516 OD2 ASP 564 -13.095 113.297 -27.264 1.00 0.00 O ATOM 4517 N TYR 565 -11.624 111.307 -21.745 1.00 0.00 N ATOM 4518 CA TYR 565 -11.516 111.731 -20.404 1.00 0.00 C ATOM 4519 C TYR 565 -10.180 112.545 -20.414 1.00 0.00 C ATOM 4520 O TYR 565 -9.078 111.949 -20.443 1.00 0.00 O ATOM 4521 CB TYR 565 -11.414 110.501 -19.430 1.00 0.00 C ATOM 4522 CG TYR 565 -10.679 109.270 -19.868 1.00 0.00 C ATOM 4523 CD1 TYR 565 -10.651 108.771 -21.175 1.00 0.00 C ATOM 4524 CD2 TYR 565 -10.013 108.499 -18.898 1.00 0.00 C ATOM 4525 CE1 TYR 565 -9.983 107.595 -21.511 1.00 0.00 C ATOM 4526 CE2 TYR 565 -9.344 107.331 -19.224 1.00 0.00 C ATOM 4527 CZ TYR 565 -9.318 106.861 -20.535 1.00 0.00 C ATOM 4528 OH TYR 565 -8.636 105.696 -20.804 1.00 0.00 H ATOM 4529 N ASP 566 -10.303 113.816 -20.360 1.00 0.00 N ATOM 4530 CA ASP 566 -9.153 114.693 -20.378 1.00 0.00 C ATOM 4531 C ASP 566 -8.310 114.302 -19.115 1.00 0.00 C ATOM 4532 O ASP 566 -8.804 114.276 -17.979 1.00 0.00 O ATOM 4533 CB ASP 566 -9.599 116.156 -20.362 1.00 0.00 C ATOM 4534 CG ASP 566 -10.695 116.546 -21.345 1.00 0.00 C ATOM 4535 OD1 ASP 566 -10.966 115.884 -22.413 1.00 0.00 O ATOM 4536 OD2 ASP 566 -11.384 117.579 -21.098 1.00 0.00 O ATOM 4537 N ILE 567 -7.070 113.802 -19.381 1.00 0.00 N ATOM 4538 CA ILE 567 -6.202 113.385 -18.301 1.00 0.00 C ATOM 4539 C ILE 567 -6.219 114.350 -17.039 1.00 0.00 C ATOM 4540 O ILE 567 -6.176 113.810 -15.929 1.00 0.00 O ATOM 4541 CB ILE 567 -4.760 113.016 -18.804 1.00 0.00 C ATOM 4542 CG1 ILE 567 -4.445 113.349 -20.249 1.00 0.00 C ATOM 4543 CG2 ILE 567 -4.324 111.542 -18.488 1.00 0.00 C ATOM 4544 CD1 ILE 567 -4.908 112.445 -21.409 1.00 0.00 C ATOM 4545 N HIS 568 -6.212 115.686 -17.182 1.00 0.00 N ATOM 4546 CA HIS 568 -6.180 116.686 -16.101 1.00 0.00 C ATOM 4547 C HIS 568 -7.343 116.566 -15.054 1.00 0.00 C ATOM 4548 O HIS 568 -7.150 117.138 -13.978 1.00 0.00 O ATOM 4549 CB HIS 568 -6.109 118.081 -16.766 1.00 0.00 C ATOM 4550 CG HIS 568 -5.660 118.072 -18.207 1.00 0.00 C ATOM 4551 ND1 HIS 568 -4.622 118.944 -18.551 1.00 0.00 N ATOM 4552 CD2 HIS 568 -6.071 117.326 -19.399 1.00 0.00 C ATOM 4553 CE1 HIS 568 -4.397 118.721 -19.925 1.00 0.00 C ATOM 4554 NE2 HIS 568 -5.244 117.760 -20.469 1.00 0.00 N ATOM 4555 N ALA 569 -8.574 116.643 -15.611 1.00 0.00 N ATOM 4556 CA ALA 569 -9.746 116.442 -14.788 1.00 0.00 C ATOM 4557 C ALA 569 -9.485 115.181 -13.908 1.00 0.00 C ATOM 4558 O ALA 569 -9.932 115.234 -12.770 1.00 0.00 O ATOM 4559 CB ALA 569 -10.999 116.343 -15.673 1.00 0.00 C ATOM 4560 N ILE 570 -9.116 113.987 -14.466 1.00 0.00 N ATOM 4561 CA ILE 570 -8.764 112.826 -13.631 1.00 0.00 C ATOM 4562 C ILE 570 -7.699 113.359 -12.606 1.00 0.00 C ATOM 4563 O ILE 570 -7.986 113.211 -11.406 1.00 0.00 O ATOM 4564 CB ILE 570 -8.318 111.616 -14.512 1.00 0.00 C ATOM 4565 CG1 ILE 570 -9.117 111.553 -15.852 1.00 0.00 C ATOM 4566 CG2 ILE 570 -8.441 110.200 -13.835 1.00 0.00 C ATOM 4567 CD1 ILE 570 -10.646 111.403 -15.756 1.00 0.00 C ATOM 4568 N MET 571 -6.679 114.181 -13.007 1.00 0.00 N ATOM 4569 CA MET 571 -5.791 114.726 -11.967 1.00 0.00 C ATOM 4570 C MET 571 -6.604 115.474 -10.844 1.00 0.00 C ATOM 4571 O MET 571 -6.294 115.193 -9.682 1.00 0.00 O ATOM 4572 CB MET 571 -4.539 115.383 -12.413 1.00 0.00 C ATOM 4573 CG MET 571 -4.482 116.457 -13.425 1.00 0.00 C ATOM 4574 SD MET 571 -3.565 115.722 -14.810 1.00 0.00 S ATOM 4575 CE MET 571 -2.547 117.004 -15.524 1.00 0.00 C ATOM 4576 N ASP 572 -7.731 116.173 -11.133 1.00 0.00 N ATOM 4577 CA ASP 572 -8.487 116.751 -9.983 1.00 0.00 C ATOM 4578 C ASP 572 -9.108 115.594 -9.091 1.00 0.00 C ATOM 4579 O ASP 572 -8.976 115.744 -7.849 1.00 0.00 O ATOM 4580 CB ASP 572 -9.695 117.526 -10.359 1.00 0.00 C ATOM 4581 CG ASP 572 -9.668 118.526 -11.438 1.00 0.00 C ATOM 4582 OD1 ASP 572 -8.624 119.169 -11.776 1.00 0.00 O ATOM 4583 OD2 ASP 572 -10.708 118.766 -12.153 1.00 0.00 O ATOM 4584 N ILE 573 -9.864 114.657 -9.643 1.00 0.00 N ATOM 4585 CA ILE 573 -10.520 113.583 -8.936 1.00 0.00 C ATOM 4586 C ILE 573 -9.604 112.984 -7.807 1.00 0.00 C ATOM 4587 O ILE 573 -10.070 113.034 -6.661 1.00 0.00 O ATOM 4588 CB ILE 573 -11.074 112.543 -9.960 1.00 0.00 C ATOM 4589 CG1 ILE 573 -11.444 113.192 -11.333 1.00 0.00 C ATOM 4590 CG2 ILE 573 -12.321 111.680 -9.515 1.00 0.00 C ATOM 4591 CD1 ILE 573 -12.554 114.259 -11.317 1.00 0.00 C ATOM 4592 N LEU 574 -8.316 112.606 -8.059 1.00 0.00 N ATOM 4593 CA LEU 574 -7.551 112.081 -6.939 1.00 0.00 C ATOM 4594 C LEU 574 -6.982 113.289 -6.076 1.00 0.00 C ATOM 4595 O LEU 574 -6.856 113.115 -4.864 1.00 0.00 O ATOM 4596 CB LEU 574 -6.369 111.258 -7.330 1.00 0.00 C ATOM 4597 CG LEU 574 -5.437 111.686 -8.466 1.00 0.00 C ATOM 4598 CD1 LEU 574 -4.805 113.003 -8.129 1.00 0.00 C ATOM 4599 CD2 LEU 574 -4.279 110.636 -8.526 1.00 0.00 C ATOM 4600 N ASN 575 -6.604 114.485 -6.624 1.00 0.00 N ATOM 4601 CA ASN 575 -6.048 115.546 -5.741 1.00 0.00 C ATOM 4602 C ASN 575 -7.080 115.885 -4.662 1.00 0.00 C ATOM 4603 O ASN 575 -6.637 116.048 -3.519 1.00 0.00 O ATOM 4604 CB ASN 575 -5.545 116.779 -6.472 1.00 0.00 C ATOM 4605 CG ASN 575 -4.680 116.684 -7.664 1.00 0.00 C ATOM 4606 OD1 ASN 575 -3.633 116.013 -7.716 1.00 0.00 O ATOM 4607 ND2 ASN 575 -5.069 117.385 -8.763 1.00 0.00 N ATOM 4608 N GLU 576 -8.315 116.302 -5.041 1.00 0.00 N ATOM 4609 CA GLU 576 -9.359 116.533 -4.081 1.00 0.00 C ATOM 4610 C GLU 576 -9.394 115.395 -3.013 1.00 0.00 C ATOM 4611 O GLU 576 -9.024 115.717 -1.882 1.00 0.00 O ATOM 4612 CB GLU 576 -10.698 116.733 -4.778 1.00 0.00 C ATOM 4613 CG GLU 576 -10.613 117.434 -6.124 1.00 0.00 C ATOM 4614 CD GLU 576 -10.021 118.818 -6.011 1.00 0.00 C ATOM 4615 OE1 GLU 576 -9.028 119.157 -6.597 1.00 0.00 O ATOM 4616 OE2 GLU 576 -10.689 119.528 -5.200 1.00 0.00 O ATOM 4617 N ARG 577 -9.551 114.084 -3.371 1.00 0.00 N ATOM 4618 CA ARG 577 -9.677 113.055 -2.303 1.00 0.00 C ATOM 4619 C ARG 577 -8.430 112.974 -1.361 1.00 0.00 C ATOM 4620 O ARG 577 -8.661 113.097 -0.184 1.00 0.00 O ATOM 4621 CB ARG 577 -10.275 111.750 -2.715 1.00 0.00 C ATOM 4622 CG ARG 577 -11.231 111.704 -3.853 1.00 0.00 C ATOM 4623 CD ARG 577 -12.507 112.422 -3.495 1.00 0.00 C ATOM 4624 NE ARG 577 -13.199 112.849 -4.719 1.00 0.00 N ATOM 4625 CZ ARG 577 -14.411 113.448 -4.773 1.00 0.00 C ATOM 4626 NH1 ARG 577 -15.174 113.605 -3.681 1.00 0.00 H ATOM 4627 NH2 ARG 577 -14.761 114.038 -5.919 1.00 0.00 H ATOM 4628 N ILE 578 -7.159 113.134 -1.839 1.00 0.00 N ATOM 4629 CA ILE 578 -5.895 113.183 -1.037 1.00 0.00 C ATOM 4630 C ILE 578 -6.022 114.357 0.026 1.00 0.00 C ATOM 4631 O ILE 578 -5.399 114.211 1.080 1.00 0.00 O ATOM 4632 CB ILE 578 -4.669 113.550 -1.946 1.00 0.00 C ATOM 4633 CG1 ILE 578 -4.403 113.005 -3.321 1.00 0.00 C ATOM 4634 CG2 ILE 578 -3.346 113.723 -1.110 1.00 0.00 C ATOM 4635 CD1 ILE 578 -4.795 111.587 -3.421 1.00 0.00 C ATOM 4636 N SER 579 -6.297 115.614 -0.384 1.00 0.00 N ATOM 4637 CA SER 579 -6.528 116.762 0.495 1.00 0.00 C ATOM 4638 C SER 579 -7.478 116.400 1.686 1.00 0.00 C ATOM 4639 O SER 579 -7.053 116.675 2.815 1.00 0.00 O ATOM 4640 CB SER 579 -7.077 117.939 -0.330 1.00 0.00 C ATOM 4641 OG SER 579 -6.902 118.166 -1.725 1.00 0.00 O ATOM 4642 N ASN 580 -8.712 115.901 1.473 1.00 0.00 N ATOM 4643 CA ASN 580 -9.634 115.545 2.575 1.00 0.00 C ATOM 4644 C ASN 580 -9.188 114.295 3.414 1.00 0.00 C ATOM 4645 O ASN 580 -9.540 114.276 4.603 1.00 0.00 O ATOM 4646 CB ASN 580 -11.021 115.306 2.005 1.00 0.00 C ATOM 4647 CG ASN 580 -11.533 115.594 0.635 1.00 0.00 C ATOM 4648 OD1 ASN 580 -11.041 116.321 -0.297 1.00 0.00 O ATOM 4649 ND2 ASN 580 -12.601 114.877 0.213 1.00 0.00 N ATOM 4650 N SER 581 -8.548 113.273 2.848 1.00 0.00 N ATOM 4651 CA SER 581 -8.149 112.018 3.493 1.00 0.00 C ATOM 4652 C SER 581 -7.304 112.346 4.744 1.00 0.00 C ATOM 4653 O SER 581 -6.296 113.068 4.637 1.00 0.00 O ATOM 4654 CB SER 581 -7.202 111.359 2.507 1.00 0.00 C ATOM 4655 OG SER 581 -6.813 112.040 1.261 1.00 0.00 O ATOM 4656 N LYS 582 -7.585 111.709 5.884 1.00 0.00 N ATOM 4657 CA LYS 582 -6.863 111.839 7.129 1.00 0.00 C ATOM 4658 C LYS 582 -5.655 110.836 7.282 1.00 0.00 C ATOM 4659 O LYS 582 -5.108 110.381 6.267 1.00 0.00 O ATOM 4660 CB LYS 582 -7.723 111.768 8.332 1.00 0.00 C ATOM 4661 CG LYS 582 -9.101 111.551 8.721 1.00 0.00 C ATOM 4662 CD LYS 582 -9.253 110.653 9.954 1.00 0.00 C ATOM 4663 CE LYS 582 -10.637 110.626 10.550 1.00 0.00 C ATOM 4664 NZ LYS 582 -10.874 109.377 11.330 1.00 0.00 N ATOM 4665 N LEU 583 -4.913 111.201 8.364 1.00 0.00 N ATOM 4666 CA LEU 583 -3.762 110.533 8.876 1.00 0.00 C ATOM 4667 C LEU 583 -3.992 109.071 9.110 1.00 0.00 C ATOM 4668 O LEU 583 -4.568 108.728 10.154 1.00 0.00 O ATOM 4669 CB LEU 583 -3.266 111.255 10.086 1.00 0.00 C ATOM 4670 CG LEU 583 -3.640 112.655 10.497 1.00 0.00 C ATOM 4671 CD1 LEU 583 -3.250 113.567 9.341 1.00 0.00 C ATOM 4672 CD2 LEU 583 -5.149 112.765 10.809 1.00 0.00 C ATOM 4673 N VAL 584 -3.090 108.345 8.556 1.00 0.00 N ATOM 4674 CA VAL 584 -3.034 106.927 8.539 1.00 0.00 C ATOM 4675 C VAL 584 -1.542 106.580 8.185 1.00 0.00 C ATOM 4676 O VAL 584 -0.833 107.398 7.543 1.00 0.00 O ATOM 4677 CB VAL 584 -3.945 106.519 7.398 1.00 0.00 C ATOM 4678 CG1 VAL 584 -5.365 107.193 7.358 1.00 0.00 C ATOM 4679 CG2 VAL 584 -3.584 106.009 6.056 1.00 0.00 C ATOM 4680 N ASN 585 -1.177 105.300 8.243 1.00 0.00 N ATOM 4681 CA ASN 585 0.159 104.915 7.828 1.00 0.00 C ATOM 4682 C ASN 585 0.353 105.059 6.286 1.00 0.00 C ATOM 4683 O ASN 585 -0.611 105.169 5.517 1.00 0.00 O ATOM 4684 CB ASN 585 0.497 103.539 8.345 1.00 0.00 C ATOM 4685 CG ASN 585 -0.298 102.629 9.189 1.00 0.00 C ATOM 4686 OD1 ASN 585 -1.259 102.883 9.994 1.00 0.00 O ATOM 4687 ND2 ASN 585 -0.104 101.298 9.031 1.00 0.00 N ATOM 4688 N ASP 586 1.569 105.498 5.981 1.00 0.00 N ATOM 4689 CA ASP 586 2.063 105.627 4.621 1.00 0.00 C ATOM 4690 C ASP 586 1.616 104.372 3.792 1.00 0.00 C ATOM 4691 O ASP 586 1.401 104.533 2.598 1.00 0.00 O ATOM 4692 CB ASP 586 3.595 105.809 4.646 1.00 0.00 C ATOM 4693 CG ASP 586 4.160 106.743 5.702 1.00 0.00 C ATOM 4694 OD1 ASP 586 3.500 107.714 6.225 1.00 0.00 O ATOM 4695 OD2 ASP 586 5.348 106.556 6.096 1.00 0.00 O ATOM 4696 N LYS 587 1.580 103.186 4.394 1.00 0.00 N ATOM 4697 CA LYS 587 1.107 101.942 3.826 1.00 0.00 C ATOM 4698 C LYS 587 -0.272 102.082 3.246 1.00 0.00 C ATOM 4699 O LYS 587 -0.360 101.876 2.025 1.00 0.00 O ATOM 4700 CB LYS 587 1.135 100.819 4.817 1.00 0.00 C ATOM 4701 CG LYS 587 1.723 101.114 6.100 1.00 0.00 C ATOM 4702 CD LYS 587 2.821 100.112 6.280 1.00 0.00 C ATOM 4703 CE LYS 587 2.424 99.208 7.472 1.00 0.00 C ATOM 4704 NZ LYS 587 3.329 97.966 7.439 1.00 0.00 N ATOM 4705 N GLN 588 -1.296 102.520 3.989 1.00 0.00 N ATOM 4706 CA GLN 588 -2.537 102.716 3.324 1.00 0.00 C ATOM 4707 C GLN 588 -2.482 103.907 2.330 1.00 0.00 C ATOM 4708 O GLN 588 -3.020 103.716 1.252 1.00 0.00 O ATOM 4709 CB GLN 588 -3.708 102.929 4.241 1.00 0.00 C ATOM 4710 CG GLN 588 -3.549 103.256 5.672 1.00 0.00 C ATOM 4711 CD GLN 588 -4.029 102.017 6.444 1.00 0.00 C ATOM 4712 OE1 GLN 588 -5.148 101.520 6.190 1.00 0.00 O ATOM 4713 NE2 GLN 588 -3.213 101.480 7.382 1.00 0.00 N ATOM 4714 N LYS 589 -1.763 105.037 2.604 1.00 0.00 N ATOM 4715 CA LYS 589 -1.780 106.085 1.614 1.00 0.00 C ATOM 4716 C LYS 589 -1.272 105.632 0.242 1.00 0.00 C ATOM 4717 O LYS 589 -1.848 106.102 -0.733 1.00 0.00 O ATOM 4718 CB LYS 589 -0.993 107.286 1.974 1.00 0.00 C ATOM 4719 CG LYS 589 -0.238 107.838 3.112 1.00 0.00 C ATOM 4720 CD LYS 589 1.002 108.621 2.667 1.00 0.00 C ATOM 4721 CE LYS 589 1.670 109.422 3.756 1.00 0.00 C ATOM 4722 NZ LYS 589 3.107 109.678 3.447 1.00 0.00 N ATOM 4723 N LYS 590 -0.046 105.169 0.119 1.00 0.00 N ATOM 4724 CA LYS 590 0.446 104.730 -1.151 1.00 0.00 C ATOM 4725 C LYS 590 -0.626 103.795 -1.808 1.00 0.00 C ATOM 4726 O LYS 590 -0.670 103.824 -3.051 1.00 0.00 O ATOM 4727 CB LYS 590 1.855 104.163 -1.049 1.00 0.00 C ATOM 4728 CG LYS 590 2.110 103.288 0.131 1.00 0.00 C ATOM 4729 CD LYS 590 3.552 102.928 0.389 1.00 0.00 C ATOM 4730 CE LYS 590 4.283 103.803 1.372 1.00 0.00 C ATOM 4731 NZ LYS 590 5.161 104.804 0.737 1.00 0.00 N ATOM 4732 N HIS 591 -1.133 102.727 -1.150 1.00 0.00 N ATOM 4733 CA HIS 591 -2.198 101.977 -1.791 1.00 0.00 C ATOM 4734 C HIS 591 -3.397 102.863 -2.282 1.00 0.00 C ATOM 4735 O HIS 591 -3.800 102.651 -3.433 1.00 0.00 O ATOM 4736 CB HIS 591 -2.766 100.890 -0.885 1.00 0.00 C ATOM 4737 CG HIS 591 -1.796 100.123 -0.074 1.00 0.00 C ATOM 4738 ND1 HIS 591 -2.023 99.815 1.272 1.00 0.00 N ATOM 4739 CD2 HIS 591 -0.600 99.586 -0.436 1.00 0.00 C ATOM 4740 CE1 HIS 591 -0.971 99.121 1.695 1.00 0.00 C ATOM 4741 NE2 HIS 591 -0.099 98.967 0.692 1.00 0.00 N ATOM 4742 N ILE 592 -3.795 103.964 -1.592 1.00 0.00 N ATOM 4743 CA ILE 592 -5.001 104.711 -2.031 1.00 0.00 C ATOM 4744 C ILE 592 -4.584 105.593 -3.219 1.00 0.00 C ATOM 4745 O ILE 592 -4.960 105.205 -4.325 1.00 0.00 O ATOM 4746 CB ILE 592 -5.575 105.651 -0.988 1.00 0.00 C ATOM 4747 CG1 ILE 592 -4.715 105.777 0.245 1.00 0.00 C ATOM 4748 CG2 ILE 592 -7.058 105.276 -0.621 1.00 0.00 C ATOM 4749 CD1 ILE 592 -4.149 107.190 0.472 1.00 0.00 C ATOM 4750 N LEU 593 -3.559 106.492 -3.114 1.00 0.00 N ATOM 4751 CA LEU 593 -3.108 107.404 -4.194 1.00 0.00 C ATOM 4752 C LEU 593 -2.536 106.643 -5.456 1.00 0.00 C ATOM 4753 O LEU 593 -2.504 107.281 -6.499 1.00 0.00 O ATOM 4754 CB LEU 593 -2.224 108.540 -3.629 1.00 0.00 C ATOM 4755 CG LEU 593 -1.087 108.001 -2.697 1.00 0.00 C ATOM 4756 CD1 LEU 593 -0.219 107.030 -3.401 1.00 0.00 C ATOM 4757 CD2 LEU 593 -0.245 109.131 -2.135 1.00 0.00 C ATOM 4758 N GLY 594 -1.845 105.490 -5.327 1.00 0.00 N ATOM 4759 CA GLY 594 -1.356 104.650 -6.432 1.00 0.00 C ATOM 4760 C GLY 594 -2.496 104.216 -7.392 1.00 0.00 C ATOM 4761 O GLY 594 -2.139 103.886 -8.527 1.00 0.00 O ATOM 4762 N GLU 595 -3.579 103.725 -6.873 1.00 0.00 N ATOM 4763 CA GLU 595 -4.733 103.358 -7.648 1.00 0.00 C ATOM 4764 C GLU 595 -5.385 104.609 -8.312 1.00 0.00 C ATOM 4765 O GLU 595 -6.148 104.394 -9.271 1.00 0.00 O ATOM 4766 CB GLU 595 -5.546 102.488 -6.765 1.00 0.00 C ATOM 4767 CG GLU 595 -5.817 101.059 -6.788 1.00 0.00 C ATOM 4768 CD GLU 595 -4.826 99.987 -6.620 1.00 0.00 C ATOM 4769 OE1 GLU 595 -3.598 100.299 -6.580 1.00 0.00 O ATOM 4770 OE2 GLU 595 -5.161 98.790 -6.515 1.00 0.00 O ATOM 4771 N LEU 596 -5.547 105.759 -7.598 1.00 0.00 N ATOM 4772 CA LEU 596 -6.063 106.986 -8.252 1.00 0.00 C ATOM 4773 C LEU 596 -5.171 107.179 -9.517 1.00 0.00 C ATOM 4774 O LEU 596 -5.697 107.122 -10.608 1.00 0.00 O ATOM 4775 CB LEU 596 -5.811 108.093 -7.250 1.00 0.00 C ATOM 4776 CG LEU 596 -6.670 108.059 -5.996 1.00 0.00 C ATOM 4777 CD1 LEU 596 -7.685 106.919 -6.086 1.00 0.00 C ATOM 4778 CD2 LEU 596 -5.749 107.832 -4.810 1.00 0.00 C ATOM 4779 N TYR 597 -3.849 107.186 -9.270 1.00 0.00 N ATOM 4780 CA TYR 597 -2.833 107.244 -10.242 1.00 0.00 C ATOM 4781 C TYR 597 -3.118 106.321 -11.464 1.00 0.00 C ATOM 4782 O TYR 597 -2.933 106.834 -12.569 1.00 0.00 O ATOM 4783 CB TYR 597 -1.568 106.675 -9.531 1.00 0.00 C ATOM 4784 CG TYR 597 -0.361 106.285 -10.374 1.00 0.00 C ATOM 4785 CD1 TYR 597 0.226 107.181 -11.242 1.00 0.00 C ATOM 4786 CD2 TYR 597 0.101 104.990 -10.249 1.00 0.00 C ATOM 4787 CE1 TYR 597 1.304 106.772 -11.999 1.00 0.00 C ATOM 4788 CE2 TYR 597 1.171 104.577 -11.003 1.00 0.00 C ATOM 4789 CZ TYR 597 1.759 105.474 -11.874 1.00 0.00 C ATOM 4790 OH TYR 597 2.827 105.069 -12.645 1.00 0.00 H ATOM 4791 N LEU 598 -3.272 104.970 -11.319 1.00 0.00 N ATOM 4792 CA LEU 598 -3.516 104.215 -12.592 1.00 0.00 C ATOM 4793 C LEU 598 -4.834 104.794 -13.242 1.00 0.00 C ATOM 4794 O LEU 598 -4.846 104.909 -14.464 1.00 0.00 O ATOM 4795 CB LEU 598 -3.456 102.717 -12.453 1.00 0.00 C ATOM 4796 CG LEU 598 -3.402 102.090 -11.086 1.00 0.00 C ATOM 4797 CD1 LEU 598 -4.668 102.262 -10.222 1.00 0.00 C ATOM 4798 CD2 LEU 598 -3.036 100.611 -11.180 1.00 0.00 C ATOM 4799 N PHE 599 -5.955 104.975 -12.518 1.00 0.00 N ATOM 4800 CA PHE 599 -7.187 105.603 -13.017 1.00 0.00 C ATOM 4801 C PHE 599 -6.993 107.029 -13.692 1.00 0.00 C ATOM 4802 O PHE 599 -7.445 107.142 -14.828 1.00 0.00 O ATOM 4803 CB PHE 599 -8.198 105.619 -11.851 1.00 0.00 C ATOM 4804 CG PHE 599 -8.472 104.233 -11.220 1.00 0.00 C ATOM 4805 CD1 PHE 599 -8.153 103.063 -11.921 1.00 0.00 C ATOM 4806 CD2 PHE 599 -8.932 104.083 -9.910 1.00 0.00 C ATOM 4807 CE1 PHE 599 -8.278 101.785 -11.385 1.00 0.00 C ATOM 4808 CE2 PHE 599 -9.078 102.816 -9.347 1.00 0.00 C ATOM 4809 CZ PHE 599 -8.727 101.679 -10.072 1.00 0.00 C ATOM 4810 N LEU 600 -5.994 107.798 -13.350 1.00 0.00 N ATOM 4811 CA LEU 600 -5.736 109.174 -13.816 1.00 0.00 C ATOM 4812 C LEU 600 -4.714 109.276 -14.990 1.00 0.00 C ATOM 4813 O LEU 600 -4.417 110.395 -15.394 1.00 0.00 O ATOM 4814 CB LEU 600 -5.313 109.811 -12.509 1.00 0.00 C ATOM 4815 CG LEU 600 -6.224 110.610 -11.636 1.00 0.00 C ATOM 4816 CD1 LEU 600 -6.442 109.895 -10.352 1.00 0.00 C ATOM 4817 CD2 LEU 600 -5.607 111.996 -11.306 1.00 0.00 C ATOM 4818 N ASN 601 -4.469 108.147 -15.676 1.00 0.00 N ATOM 4819 CA ASN 601 -3.572 108.002 -16.774 1.00 0.00 C ATOM 4820 C ASN 601 -2.176 108.652 -16.554 1.00 0.00 C ATOM 4821 O ASN 601 -1.612 109.298 -17.445 1.00 0.00 O ATOM 4822 CB ASN 601 -4.218 108.093 -18.122 1.00 0.00 C ATOM 4823 CG ASN 601 -5.597 108.534 -18.411 1.00 0.00 C ATOM 4824 OD1 ASN 601 -6.657 108.407 -17.711 1.00 0.00 O ATOM 4825 ND2 ASN 601 -5.816 109.234 -19.550 1.00 0.00 N ATOM 4826 N ASP 602 -1.660 108.310 -15.404 1.00 0.00 N ATOM 4827 CA ASP 602 -0.399 108.727 -14.868 1.00 0.00 C ATOM 4828 C ASP 602 -0.197 110.268 -14.815 1.00 0.00 C ATOM 4829 O ASP 602 0.885 110.690 -15.277 1.00 0.00 O ATOM 4830 CB ASP 602 0.717 108.004 -15.627 1.00 0.00 C ATOM 4831 CG ASP 602 0.460 106.588 -16.117 1.00 0.00 C ATOM 4832 OD1 ASP 602 -0.308 105.764 -15.494 1.00 0.00 O ATOM 4833 OD2 ASP 602 1.015 106.189 -17.182 1.00 0.00 O ATOM 4834 N ASN 603 -1.257 111.114 -14.706 1.00 0.00 N ATOM 4835 CA ASN 603 -0.998 112.565 -14.463 1.00 0.00 C ATOM 4836 C ASN 603 -1.389 113.080 -13.047 1.00 0.00 C ATOM 4837 O ASN 603 -0.706 113.998 -12.571 1.00 0.00 O ATOM 4838 CB ASN 603 -1.175 113.535 -15.573 1.00 0.00 C ATOM 4839 CG ASN 603 -0.974 113.198 -16.987 1.00 0.00 C ATOM 4840 OD1 ASN 603 0.129 112.813 -17.413 1.00 0.00 O ATOM 4841 ND2 ASN 603 -2.007 113.339 -17.861 1.00 0.00 N ATOM 4842 N GLY 604 -2.391 112.483 -12.422 1.00 0.00 N ATOM 4843 CA GLY 604 -2.764 112.823 -11.057 1.00 0.00 C ATOM 4844 C GLY 604 -1.624 112.584 -10.064 1.00 0.00 C ATOM 4845 O GLY 604 -1.312 113.532 -9.346 1.00 0.00 O ATOM 4846 N TYR 605 -1.011 111.372 -10.070 1.00 0.00 N ATOM 4847 CA TYR 605 0.074 111.057 -9.176 1.00 0.00 C ATOM 4848 C TYR 605 1.222 112.124 -9.354 1.00 0.00 C ATOM 4849 O TYR 605 1.581 112.684 -8.329 1.00 0.00 O ATOM 4850 CB TYR 605 0.570 109.626 -9.330 1.00 0.00 C ATOM 4851 CG TYR 605 1.605 109.505 -10.459 1.00 0.00 C ATOM 4852 CD1 TYR 605 2.969 109.454 -10.145 1.00 0.00 C ATOM 4853 CD2 TYR 605 1.192 109.551 -11.793 1.00 0.00 C ATOM 4854 CE1 TYR 605 3.920 109.420 -11.166 1.00 0.00 C ATOM 4855 CE2 TYR 605 2.141 109.518 -12.824 1.00 0.00 C ATOM 4856 CZ TYR 605 3.504 109.477 -12.498 1.00 0.00 C ATOM 4857 OH TYR 605 4.460 109.437 -13.516 1.00 0.00 H ATOM 4858 N LEU 606 1.749 112.410 -10.583 1.00 0.00 N ATOM 4859 CA LEU 606 2.813 113.412 -10.641 1.00 0.00 C ATOM 4860 C LEU 606 2.362 114.733 -10.000 1.00 0.00 C ATOM 4861 O LEU 606 3.216 115.309 -9.312 1.00 0.00 O ATOM 4862 CB LEU 606 3.440 113.600 -12.024 1.00 0.00 C ATOM 4863 CG LEU 606 3.150 112.566 -13.103 1.00 0.00 C ATOM 4864 CD1 LEU 606 1.859 112.969 -13.832 1.00 0.00 C ATOM 4865 CD2 LEU 606 4.261 112.563 -14.180 1.00 0.00 C ATOM 4866 N LYS 607 1.234 115.376 -10.417 1.00 0.00 N ATOM 4867 CA LYS 607 0.868 116.585 -9.709 1.00 0.00 C ATOM 4868 C LYS 607 0.772 116.373 -8.155 1.00 0.00 C ATOM 4869 O LYS 607 0.998 117.374 -7.462 1.00 0.00 O ATOM 4870 CB LYS 607 -0.264 117.375 -10.343 1.00 0.00 C ATOM 4871 CG LYS 607 -1.177 116.629 -11.279 1.00 0.00 C ATOM 4872 CD LYS 607 -1.615 117.583 -12.406 1.00 0.00 C ATOM 4873 CE LYS 607 -2.724 118.522 -11.977 1.00 0.00 C ATOM 4874 NZ LYS 607 -2.535 119.899 -12.543 1.00 0.00 N ATOM 4875 N SER 608 0.184 115.264 -7.620 1.00 0.00 N ATOM 4876 CA SER 608 0.232 115.087 -6.160 1.00 0.00 C ATOM 4877 C SER 608 1.735 115.040 -5.651 1.00 0.00 C ATOM 4878 O SER 608 1.935 115.439 -4.502 1.00 0.00 O ATOM 4879 CB SER 608 -0.636 113.876 -5.740 1.00 0.00 C ATOM 4880 OG SER 608 -0.999 112.962 -6.830 1.00 0.00 O ATOM 4881 N ILE 609 2.710 114.409 -6.363 1.00 0.00 N ATOM 4882 CA ILE 609 4.135 114.473 -5.916 1.00 0.00 C ATOM 4883 C ILE 609 4.724 115.948 -5.958 1.00 0.00 C ATOM 4884 O ILE 609 5.717 116.156 -5.259 1.00 0.00 O ATOM 4885 CB ILE 609 4.977 113.406 -6.713 1.00 0.00 C ATOM 4886 CG1 ILE 609 4.119 112.162 -7.118 1.00 0.00 C ATOM 4887 CG2 ILE 609 6.275 112.861 -6.010 1.00 0.00 C ATOM 4888 CD1 ILE 609 3.509 111.332 -5.975 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.84 71.8 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 31.82 87.1 70 100.0 70 ARMSMC SURFACE . . . . . . . . 62.24 66.7 90 100.0 90 ARMSMC BURIED . . . . . . . . 18.30 95.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 99.67 15.1 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 100.58 13.5 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 99.85 18.2 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 102.49 14.0 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 86.51 20.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.17 27.7 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 78.87 33.3 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 90.29 29.0 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 84.50 28.9 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 87.94 22.2 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 51.40 58.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 56.23 50.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 46.99 55.6 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 50.61 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 55.18 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 54.12 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 54.12 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 21.22 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 58.91 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 14.94 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.01 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.01 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1788 CRMSCA SECONDARY STRUCTURE . . 7.03 35 100.0 35 CRMSCA SURFACE . . . . . . . . 10.28 46 100.0 46 CRMSCA BURIED . . . . . . . . 8.70 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.07 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 6.94 174 100.0 174 CRMSMC SURFACE . . . . . . . . 10.38 228 100.0 228 CRMSMC BURIED . . . . . . . . 8.46 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.83 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 10.99 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 8.97 151 100.0 151 CRMSSC SURFACE . . . . . . . . 11.07 196 100.0 196 CRMSSC BURIED . . . . . . . . 9.51 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.43 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 7.97 291 100.0 291 CRMSALL SURFACE . . . . . . . . 10.73 380 100.0 380 CRMSALL BURIED . . . . . . . . 8.83 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.888 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 6.104 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 8.125 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 6.801 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.896 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 5.998 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 8.167 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 6.660 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.069 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 9.168 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 7.802 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 9.423 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 7.289 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.455 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 6.864 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 8.780 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 6.892 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 9 21 43 56 56 DISTCA CA (P) 0.00 3.57 16.07 37.50 76.79 56 DISTCA CA (RMS) 0.00 1.66 2.33 3.15 5.34 DISTCA ALL (N) 0 13 72 163 331 459 459 DISTALL ALL (P) 0.00 2.83 15.69 35.51 72.11 459 DISTALL ALL (RMS) 0.00 1.79 2.45 3.43 5.65 DISTALL END of the results output