####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS113_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS113_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 573 - 606 4.94 9.32 LONGEST_CONTINUOUS_SEGMENT: 34 574 - 607 4.96 9.27 LCS_AVERAGE: 57.14 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 567 - 581 1.89 12.50 LCS_AVERAGE: 20.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 567 - 577 0.99 13.33 LONGEST_CONTINUOUS_SEGMENT: 11 585 - 595 0.80 14.98 LCS_AVERAGE: 14.03 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 8 11 28 5 8 9 9 10 11 12 14 15 20 22 26 27 28 34 37 40 43 46 49 LCS_GDT S 555 S 555 8 11 28 5 8 9 9 10 11 12 14 15 20 22 26 27 28 29 29 33 39 45 49 LCS_GDT I 556 I 556 8 11 28 5 8 9 9 10 11 12 14 15 20 22 26 27 28 29 29 34 38 40 43 LCS_GDT L 557 L 557 8 11 28 5 8 9 9 10 11 12 14 15 20 22 26 27 32 36 38 40 43 46 49 LCS_GDT D 558 D 558 8 11 28 5 8 9 9 10 11 12 14 15 20 22 26 27 32 36 38 40 43 46 49 LCS_GDT T 559 T 559 8 11 28 5 8 9 9 10 11 12 14 16 20 22 26 27 28 32 37 38 41 43 49 LCS_GDT L 560 L 560 8 11 28 5 8 9 9 10 11 12 14 17 20 22 26 27 32 36 38 40 41 46 49 LCS_GDT E 561 E 561 8 11 28 4 8 9 9 10 11 12 14 15 20 22 26 29 33 36 38 40 43 46 49 LCS_GDT D 562 D 562 4 11 28 3 4 4 6 10 12 14 16 17 20 22 26 27 33 36 38 40 43 46 49 LCS_GDT L 563 L 563 4 11 28 3 4 9 9 10 12 14 16 17 19 22 26 27 28 29 29 35 43 46 49 LCS_GDT D 564 D 564 4 11 28 3 4 6 8 10 11 14 16 17 20 22 26 27 28 29 32 40 43 46 49 LCS_GDT Y 565 Y 565 4 8 28 3 4 6 8 10 11 14 16 17 20 22 26 27 28 29 37 40 43 46 49 LCS_GDT D 566 D 566 4 12 33 3 4 6 8 10 12 14 16 17 20 26 30 33 36 39 40 41 43 46 49 LCS_GDT I 567 I 567 11 15 33 3 8 11 13 14 14 16 17 19 22 26 29 33 35 39 40 41 42 43 46 LCS_GDT H 568 H 568 11 15 33 3 5 11 12 14 14 16 17 19 20 25 28 31 35 39 40 41 42 42 46 LCS_GDT A 569 A 569 11 15 33 4 8 11 13 14 14 16 17 18 19 24 28 31 33 39 40 41 42 43 46 LCS_GDT I 570 I 570 11 15 33 4 6 11 13 14 14 16 17 18 22 26 30 33 36 39 40 41 43 46 49 LCS_GDT M 571 M 571 11 15 33 4 7 11 13 14 14 16 17 19 22 26 30 33 36 39 40 41 43 46 49 LCS_GDT D 572 D 572 11 15 33 4 8 11 13 14 14 16 17 19 22 26 29 33 35 39 40 41 43 46 49 LCS_GDT I 573 I 573 11 15 34 4 8 11 13 14 14 16 17 19 22 26 30 33 36 39 40 41 43 46 49 LCS_GDT L 574 L 574 11 15 34 4 8 11 13 14 14 16 17 19 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT N 575 N 575 11 15 34 4 8 11 13 14 14 16 17 19 22 27 30 33 36 39 40 41 43 46 49 LCS_GDT E 576 E 576 11 15 34 4 8 11 13 14 14 16 17 19 22 27 30 33 36 39 40 41 43 46 49 LCS_GDT R 577 R 577 11 15 34 3 8 11 13 14 14 16 17 19 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT I 578 I 578 8 15 34 3 6 8 13 14 14 16 17 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT S 579 S 579 8 15 34 3 6 8 13 14 14 16 17 19 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT N 580 N 580 8 15 34 3 3 6 13 14 14 16 17 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT S 581 S 581 5 15 34 4 4 6 6 10 14 16 17 19 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT K 582 K 582 5 9 34 4 4 6 6 10 14 16 17 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 583 L 583 5 7 34 4 4 6 6 9 10 13 16 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT V 584 V 584 5 13 34 4 6 6 8 12 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT N 585 N 585 11 13 34 6 10 11 13 13 15 18 19 20 22 25 29 32 36 39 40 41 42 45 49 LCS_GDT D 586 D 586 11 13 34 6 10 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT K 587 K 587 11 13 34 6 10 11 13 13 15 18 19 20 22 25 29 32 36 37 40 41 43 46 49 LCS_GDT Q 588 Q 588 11 13 34 6 10 11 13 13 15 18 19 20 22 25 29 32 36 39 40 41 42 46 49 LCS_GDT K 589 K 589 11 13 34 6 10 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT K 590 K 590 11 13 34 6 10 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT H 591 H 591 11 13 34 6 10 11 13 13 15 18 19 21 23 27 30 33 36 39 40 41 43 46 49 LCS_GDT I 592 I 592 11 13 34 6 10 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 593 L 593 11 13 34 6 10 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT G 594 G 594 11 13 34 5 10 11 13 13 15 18 19 21 24 26 30 33 36 39 40 41 43 46 49 LCS_GDT E 595 E 595 11 13 34 4 8 11 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 596 L 596 6 13 34 4 6 6 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT Y 597 Y 597 6 13 34 3 6 6 7 11 15 17 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 598 L 598 6 8 34 3 6 6 7 9 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT F 599 F 599 6 8 34 3 6 6 7 10 13 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 600 L 600 6 8 34 3 6 7 13 13 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT N 601 N 601 6 8 34 3 6 6 8 11 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT D 602 D 602 3 7 34 3 3 6 9 10 14 17 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT N 603 N 603 3 7 34 3 3 5 7 12 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT G 604 G 604 3 6 34 3 3 4 4 5 8 9 13 15 19 25 28 33 35 37 40 41 43 46 49 LCS_GDT Y 605 Y 605 5 6 34 3 4 5 5 11 14 16 17 20 24 27 30 33 36 39 40 41 43 46 49 LCS_GDT L 606 L 606 5 6 34 3 4 5 5 9 11 15 17 18 19 26 30 33 36 39 40 41 43 46 49 LCS_GDT K 607 K 607 5 6 34 3 4 5 5 5 7 7 8 8 13 17 22 27 32 36 38 40 41 43 46 LCS_GDT S 608 S 608 5 6 25 3 4 5 5 5 7 7 8 8 8 9 9 10 11 13 20 24 36 38 40 LCS_GDT I 609 I 609 5 6 10 3 3 5 5 5 6 7 8 8 8 9 9 10 11 13 14 15 16 25 25 LCS_AVERAGE LCS_A: 30.59 ( 14.03 20.60 57.14 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 11 13 14 15 18 19 21 24 27 30 33 36 39 40 41 43 46 49 GDT PERCENT_AT 10.71 17.86 19.64 23.21 25.00 26.79 32.14 33.93 37.50 42.86 48.21 53.57 58.93 64.29 69.64 71.43 73.21 76.79 82.14 87.50 GDT RMS_LOCAL 0.19 0.54 0.99 1.34 1.41 2.16 2.53 2.67 3.39 3.98 4.29 4.64 4.84 5.10 5.35 5.45 5.54 6.57 6.84 7.14 GDT RMS_ALL_AT 15.37 15.07 13.33 13.42 13.24 12.04 11.97 11.78 10.11 9.44 9.39 9.70 9.57 9.60 10.21 10.07 10.02 8.57 8.52 8.53 # Checking swapping # possible swapping detected: D 558 D 558 # possible swapping detected: E 561 E 561 # possible swapping detected: D 562 D 562 # possible swapping detected: D 564 D 564 # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 566 D 566 # possible swapping detected: D 586 D 586 # possible swapping detected: Y 597 Y 597 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 15.349 0 0.041 1.444 17.561 0.000 0.000 LGA S 555 S 555 16.210 0 0.158 0.634 16.210 0.000 0.000 LGA I 556 I 556 16.524 0 0.028 1.043 18.998 0.000 0.000 LGA L 557 L 557 12.756 0 0.157 1.110 14.299 0.000 0.000 LGA D 558 D 558 11.778 0 0.067 1.254 12.521 0.000 0.060 LGA T 559 T 559 14.132 0 0.079 0.120 16.409 0.000 0.000 LGA L 560 L 560 12.573 0 0.439 0.942 15.485 0.000 0.000 LGA E 561 E 561 9.700 0 0.623 1.172 11.032 0.119 4.868 LGA D 562 D 562 11.825 0 0.317 0.900 14.276 0.000 0.000 LGA L 563 L 563 14.768 0 0.644 1.246 18.124 0.000 0.000 LGA D 564 D 564 17.200 0 0.372 0.758 20.877 0.000 0.000 LGA Y 565 Y 565 17.478 0 0.353 1.393 19.164 0.000 0.000 LGA D 566 D 566 18.928 0 0.464 1.134 20.012 0.000 0.000 LGA I 567 I 567 21.483 0 0.089 0.628 23.830 0.000 0.000 LGA H 568 H 568 23.329 0 0.162 1.141 30.207 0.000 0.000 LGA A 569 A 569 23.322 0 0.269 0.272 24.692 0.000 0.000 LGA I 570 I 570 17.216 0 0.088 0.270 19.509 0.000 0.000 LGA M 571 M 571 16.586 0 0.282 1.155 21.328 0.000 0.000 LGA D 572 D 572 19.474 0 0.087 1.340 25.547 0.000 0.000 LGA I 573 I 573 17.182 0 0.224 1.637 19.548 0.000 0.000 LGA L 574 L 574 11.554 0 0.388 1.260 13.682 1.190 0.952 LGA N 575 N 575 12.080 0 0.381 1.178 15.885 0.000 0.000 LGA E 576 E 576 13.448 0 0.384 1.472 15.915 0.000 0.000 LGA R 577 R 577 10.781 0 0.700 0.848 21.454 5.476 1.991 LGA I 578 I 578 6.065 0 0.319 1.454 7.933 17.976 19.226 LGA S 579 S 579 8.003 0 0.321 0.298 10.367 7.262 4.921 LGA N 580 N 580 7.966 0 0.490 0.839 12.518 5.000 2.679 LGA S 581 S 581 10.097 0 0.172 0.639 10.859 2.857 2.143 LGA K 582 K 582 8.859 0 0.396 1.042 17.148 2.143 0.952 LGA L 583 L 583 9.332 0 0.322 0.954 13.843 5.714 2.857 LGA V 584 V 584 2.867 0 0.660 1.387 5.882 55.476 51.156 LGA N 585 N 585 2.194 0 0.594 1.092 8.794 72.976 44.821 LGA D 586 D 586 0.710 0 0.027 0.622 3.894 92.857 78.155 LGA K 587 K 587 2.257 0 0.083 1.396 5.217 67.024 50.265 LGA Q 588 Q 588 2.987 0 0.049 1.249 6.499 60.952 39.524 LGA K 589 K 589 2.282 0 0.042 0.632 5.543 68.810 51.164 LGA K 590 K 590 1.392 0 0.102 0.844 5.438 79.286 60.423 LGA H 591 H 591 1.595 0 0.062 0.887 4.889 79.286 60.905 LGA I 592 I 592 1.970 0 0.025 1.433 7.049 72.857 57.857 LGA L 593 L 593 2.273 0 0.145 0.767 4.217 63.095 59.583 LGA G 594 G 594 2.019 0 0.115 0.115 2.154 70.952 70.952 LGA E 595 E 595 1.689 0 0.246 0.754 4.949 66.905 52.751 LGA L 596 L 596 2.450 0 0.607 1.081 7.767 63.095 42.143 LGA Y 597 Y 597 4.100 0 0.177 0.682 12.927 41.905 16.548 LGA L 598 L 598 3.435 0 0.133 1.082 8.592 51.905 35.774 LGA F 599 F 599 4.073 0 0.051 1.262 9.464 45.357 24.848 LGA L 600 L 600 2.915 0 0.589 0.688 7.525 57.500 38.393 LGA N 601 N 601 3.088 0 0.723 1.245 5.742 45.357 46.905 LGA D 602 D 602 5.441 0 0.504 1.345 11.450 47.262 24.940 LGA N 603 N 603 3.374 0 0.091 0.932 6.027 36.548 30.893 LGA G 604 G 604 7.827 0 0.293 0.293 9.337 8.214 8.214 LGA Y 605 Y 605 6.347 0 0.508 1.084 8.410 19.405 15.516 LGA L 606 L 606 8.441 0 0.209 0.455 14.743 3.810 1.905 LGA K 607 K 607 9.664 0 0.463 1.596 13.998 1.310 0.952 LGA S 608 S 608 15.439 0 0.093 0.666 17.345 0.000 0.000 LGA I 609 I 609 18.208 0 0.090 0.241 20.643 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 8.441 8.357 9.237 23.569 17.951 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 19 2.65 36.607 32.312 0.690 LGA_LOCAL RMSD: 2.654 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.685 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 8.441 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.995863 * X + -0.066283 * Y + -0.062152 * Z + 82.951775 Y_new = -0.058637 * X + -0.053713 * Y + 0.996833 * Z + 31.599337 Z_new = -0.069411 * X + 0.996354 * Y + 0.049604 * Z + -102.642128 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.082780 0.069467 1.521052 [DEG: -176.6303 3.9802 87.1499 ] ZXZ: -3.079324 1.521172 -0.069553 [DEG: -176.4323 87.1567 -3.9851 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS113_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS113_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 19 2.65 32.312 8.44 REMARK ---------------------------------------------------------- MOLECULE T0547TS113_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 4430 N GLN 554 1.845 111.447 -18.964 1.00 0.00 N ATOM 4431 CA GLN 554 1.036 111.548 -17.771 1.00 0.00 C ATOM 4432 C GLN 554 1.875 112.050 -16.555 1.00 0.00 C ATOM 4433 O GLN 554 3.059 111.736 -16.378 1.00 0.00 O ATOM 4434 CB GLN 554 0.398 110.161 -17.558 1.00 0.00 C ATOM 4435 CG GLN 554 -0.998 109.922 -18.063 1.00 0.00 C ATOM 4436 CD GLN 554 -0.965 110.020 -19.574 1.00 0.00 C ATOM 4437 OE1 GLN 554 -1.915 110.529 -20.165 1.00 0.00 O ATOM 4438 NE2 GLN 554 0.122 109.513 -20.216 1.00 0.00 N ATOM 4439 N SER 555 1.387 113.153 -16.014 1.00 0.00 N ATOM 4440 CA SER 555 1.875 113.805 -14.821 1.00 0.00 C ATOM 4441 C SER 555 1.285 113.100 -13.582 1.00 0.00 C ATOM 4442 O SER 555 0.859 111.936 -13.701 1.00 0.00 O ATOM 4443 CB SER 555 1.500 115.293 -14.919 1.00 0.00 C ATOM 4444 OG SER 555 1.797 116.087 -13.755 1.00 0.00 O ATOM 4445 N ILE 556 1.785 113.461 -12.405 1.00 0.00 N ATOM 4446 CA ILE 556 1.169 112.889 -11.204 1.00 0.00 C ATOM 4447 C ILE 556 -0.361 113.279 -11.196 1.00 0.00 C ATOM 4448 O ILE 556 -1.139 112.370 -10.929 1.00 0.00 O ATOM 4449 CB ILE 556 1.975 113.242 -9.907 1.00 0.00 C ATOM 4450 CG1 ILE 556 1.474 112.431 -8.679 1.00 0.00 C ATOM 4451 CG2 ILE 556 2.033 114.769 -9.629 1.00 0.00 C ATOM 4452 CD1 ILE 556 2.422 112.612 -7.474 1.00 0.00 C ATOM 4453 N LEU 557 -0.762 114.579 -11.183 1.00 0.00 N ATOM 4454 CA LEU 557 -2.195 114.928 -11.267 1.00 0.00 C ATOM 4455 C LEU 557 -2.810 114.100 -12.459 1.00 0.00 C ATOM 4456 O LEU 557 -4.037 113.944 -12.425 1.00 0.00 O ATOM 4457 CB LEU 557 -2.318 116.451 -11.376 1.00 0.00 C ATOM 4458 CG LEU 557 -3.699 117.102 -11.278 1.00 0.00 C ATOM 4459 CD1 LEU 557 -3.465 118.571 -11.445 1.00 0.00 C ATOM 4460 CD2 LEU 557 -4.665 116.760 -12.354 1.00 0.00 C ATOM 4461 N ASP 558 -2.173 114.147 -13.662 1.00 0.00 N ATOM 4462 CA ASP 558 -2.540 113.371 -14.834 1.00 0.00 C ATOM 4463 C ASP 558 -2.790 111.902 -14.406 1.00 0.00 C ATOM 4464 O ASP 558 -3.635 111.287 -15.072 1.00 0.00 O ATOM 4465 CB ASP 558 -1.595 113.573 -15.977 1.00 0.00 C ATOM 4466 CG ASP 558 -1.997 113.128 -17.329 1.00 0.00 C ATOM 4467 OD1 ASP 558 -2.842 112.268 -17.577 1.00 0.00 O ATOM 4468 OD2 ASP 558 -1.327 113.651 -18.252 1.00 0.00 O ATOM 4469 N THR 559 -1.934 111.244 -13.573 1.00 0.00 N ATOM 4470 CA THR 559 -2.331 109.875 -13.138 1.00 0.00 C ATOM 4471 C THR 559 -3.632 109.975 -12.234 1.00 0.00 C ATOM 4472 O THR 559 -4.383 108.993 -12.223 1.00 0.00 O ATOM 4473 CB THR 559 -1.208 109.139 -12.365 1.00 0.00 C ATOM 4474 OG1 THR 559 -0.007 108.874 -13.085 1.00 0.00 O ATOM 4475 CG2 THR 559 -1.707 107.766 -11.778 1.00 0.00 C ATOM 4476 N LEU 560 -4.089 111.177 -11.775 1.00 0.00 N ATOM 4477 CA LEU 560 -5.230 111.405 -10.840 1.00 0.00 C ATOM 4478 C LEU 560 -6.520 112.008 -11.504 1.00 0.00 C ATOM 4479 O LEU 560 -7.040 112.971 -10.919 1.00 0.00 O ATOM 4480 CB LEU 560 -4.752 112.249 -9.644 1.00 0.00 C ATOM 4481 CG LEU 560 -4.018 111.413 -8.604 1.00 0.00 C ATOM 4482 CD1 LEU 560 -2.781 110.772 -9.247 1.00 0.00 C ATOM 4483 CD2 LEU 560 -3.700 112.218 -7.335 1.00 0.00 C ATOM 4484 N GLU 561 -6.742 111.879 -12.839 1.00 0.00 N ATOM 4485 CA GLU 561 -7.945 112.378 -13.528 1.00 0.00 C ATOM 4486 C GLU 561 -8.885 111.145 -13.778 1.00 0.00 C ATOM 4487 O GLU 561 -8.378 110.068 -14.136 1.00 0.00 O ATOM 4488 CB GLU 561 -7.569 113.112 -14.817 1.00 0.00 C ATOM 4489 CG GLU 561 -6.739 112.321 -15.825 1.00 0.00 C ATOM 4490 CD GLU 561 -7.582 111.871 -17.009 1.00 0.00 C ATOM 4491 OE1 GLU 561 -8.034 112.768 -17.770 1.00 0.00 O ATOM 4492 OE2 GLU 561 -7.777 110.639 -17.185 1.00 0.00 O ATOM 4493 N ASP 562 -10.207 111.348 -13.862 1.00 0.00 N ATOM 4494 CA ASP 562 -11.174 110.230 -13.986 1.00 0.00 C ATOM 4495 C ASP 562 -11.027 109.268 -12.729 1.00 0.00 C ATOM 4496 O ASP 562 -11.058 108.038 -12.920 1.00 0.00 O ATOM 4497 CB ASP 562 -11.033 109.522 -15.359 1.00 0.00 C ATOM 4498 CG ASP 562 -12.175 108.520 -15.565 1.00 0.00 C ATOM 4499 OD1 ASP 562 -13.130 108.415 -14.789 1.00 0.00 O ATOM 4500 OD2 ASP 562 -12.119 107.858 -16.593 1.00 0.00 O ATOM 4501 N LEU 563 -11.033 109.767 -11.482 1.00 0.00 N ATOM 4502 CA LEU 563 -10.829 108.948 -10.293 1.00 0.00 C ATOM 4503 C LEU 563 -12.094 108.823 -9.429 1.00 0.00 C ATOM 4504 O LEU 563 -13.027 109.658 -9.549 1.00 0.00 O ATOM 4505 CB LEU 563 -9.753 109.672 -9.445 1.00 0.00 C ATOM 4506 CG LEU 563 -10.156 111.116 -9.096 1.00 0.00 C ATOM 4507 CD1 LEU 563 -11.168 111.280 -7.950 1.00 0.00 C ATOM 4508 CD2 LEU 563 -8.883 111.962 -8.946 1.00 0.00 C ATOM 4509 N ASP 564 -12.293 107.606 -8.891 1.00 0.00 N ATOM 4510 CA ASP 564 -13.378 107.463 -8.013 1.00 0.00 C ATOM 4511 C ASP 564 -13.027 106.747 -6.673 1.00 0.00 C ATOM 4512 O ASP 564 -12.604 105.579 -6.677 1.00 0.00 O ATOM 4513 CB ASP 564 -14.497 106.697 -8.737 1.00 0.00 C ATOM 4514 CG ASP 564 -15.907 106.758 -8.136 1.00 0.00 C ATOM 4515 OD1 ASP 564 -16.178 107.504 -7.186 1.00 0.00 O ATOM 4516 OD2 ASP 564 -16.747 106.042 -8.670 1.00 0.00 O ATOM 4517 N TYR 565 -12.964 107.513 -5.572 1.00 0.00 N ATOM 4518 CA TYR 565 -12.777 106.990 -4.206 1.00 0.00 C ATOM 4519 C TYR 565 -14.040 107.502 -3.510 1.00 0.00 C ATOM 4520 O TYR 565 -13.968 108.434 -2.692 1.00 0.00 O ATOM 4521 CB TYR 565 -11.464 107.429 -3.551 1.00 0.00 C ATOM 4522 CG TYR 565 -11.221 108.908 -3.665 1.00 0.00 C ATOM 4523 CD1 TYR 565 -10.877 109.500 -4.894 1.00 0.00 C ATOM 4524 CD2 TYR 565 -11.372 109.752 -2.562 1.00 0.00 C ATOM 4525 CE1 TYR 565 -10.673 110.870 -5.010 1.00 0.00 C ATOM 4526 CE2 TYR 565 -11.169 111.120 -2.676 1.00 0.00 C ATOM 4527 CZ TYR 565 -10.821 111.685 -3.892 1.00 0.00 C ATOM 4528 OH TYR 565 -10.658 113.045 -3.967 1.00 0.00 H ATOM 4529 N ASP 566 -15.128 106.728 -3.670 1.00 0.00 N ATOM 4530 CA ASP 566 -16.384 107.212 -3.128 1.00 0.00 C ATOM 4531 C ASP 566 -17.033 106.379 -2.002 1.00 0.00 C ATOM 4532 O ASP 566 -18.170 106.726 -1.640 1.00 0.00 O ATOM 4533 CB ASP 566 -17.388 107.263 -4.315 1.00 0.00 C ATOM 4534 CG ASP 566 -18.467 108.336 -4.072 1.00 0.00 C ATOM 4535 OD1 ASP 566 -18.372 109.198 -3.239 1.00 0.00 O ATOM 4536 OD2 ASP 566 -19.492 108.213 -4.876 1.00 0.00 O ATOM 4537 N ILE 567 -16.344 105.456 -1.346 1.00 0.00 N ATOM 4538 CA ILE 567 -16.983 104.703 -0.285 1.00 0.00 C ATOM 4539 C ILE 567 -17.336 105.541 1.013 1.00 0.00 C ATOM 4540 O ILE 567 -18.351 105.202 1.594 1.00 0.00 O ATOM 4541 CB ILE 567 -16.290 103.343 -0.020 1.00 0.00 C ATOM 4542 CG1 ILE 567 -15.969 102.563 -1.312 1.00 0.00 C ATOM 4543 CG2 ILE 567 -17.092 102.567 1.044 1.00 0.00 C ATOM 4544 CD1 ILE 567 -17.293 102.183 -2.036 1.00 0.00 C ATOM 4545 N HIS 568 -16.905 106.831 1.169 1.00 0.00 N ATOM 4546 CA HIS 568 -17.171 107.551 2.444 1.00 0.00 C ATOM 4547 C HIS 568 -16.270 106.879 3.493 1.00 0.00 C ATOM 4548 O HIS 568 -16.135 107.521 4.484 1.00 0.00 O ATOM 4549 CB HIS 568 -18.667 107.633 2.839 1.00 0.00 C ATOM 4550 CG HIS 568 -18.917 106.672 4.031 1.00 0.00 C ATOM 4551 ND1 HIS 568 -19.413 105.393 3.916 1.00 0.00 N ATOM 4552 CD2 HIS 568 -18.766 106.889 5.367 1.00 0.00 C ATOM 4553 CE1 HIS 568 -19.535 104.904 5.174 1.00 0.00 C ATOM 4554 NE2 HIS 568 -19.154 105.775 6.089 1.00 0.00 N ATOM 4555 N ALA 569 -16.339 105.519 3.614 1.00 0.00 N ATOM 4556 CA ALA 569 -15.420 104.887 4.515 1.00 0.00 C ATOM 4557 C ALA 569 -13.989 105.438 4.111 1.00 0.00 C ATOM 4558 O ALA 569 -13.081 105.021 4.755 1.00 0.00 O ATOM 4559 CB ALA 569 -15.557 103.357 4.494 1.00 0.00 C ATOM 4560 N ILE 570 -13.786 105.638 2.771 1.00 0.00 N ATOM 4561 CA ILE 570 -12.619 106.268 2.142 1.00 0.00 C ATOM 4562 C ILE 570 -12.770 107.820 2.447 1.00 0.00 C ATOM 4563 O ILE 570 -11.767 108.457 2.461 1.00 0.00 O ATOM 4564 CB ILE 570 -12.807 106.077 0.622 1.00 0.00 C ATOM 4565 CG1 ILE 570 -12.850 104.565 0.321 1.00 0.00 C ATOM 4566 CG2 ILE 570 -11.599 106.625 -0.128 1.00 0.00 C ATOM 4567 CD1 ILE 570 -13.328 104.352 -1.105 1.00 0.00 C ATOM 4568 N MET 571 -13.943 108.473 2.198 1.00 0.00 N ATOM 4569 CA MET 571 -14.044 109.895 2.614 1.00 0.00 C ATOM 4570 C MET 571 -13.793 110.128 4.165 1.00 0.00 C ATOM 4571 O MET 571 -14.060 111.263 4.585 1.00 0.00 O ATOM 4572 CB MET 571 -15.434 110.418 2.247 1.00 0.00 C ATOM 4573 CG MET 571 -15.689 110.786 0.828 1.00 0.00 C ATOM 4574 SD MET 571 -17.113 111.884 0.576 1.00 0.00 S ATOM 4575 CE MET 571 -16.334 113.282 1.439 1.00 0.00 C ATOM 4576 N ASP 572 -14.103 109.077 4.940 1.00 0.00 N ATOM 4577 CA ASP 572 -13.908 108.973 6.407 1.00 0.00 C ATOM 4578 C ASP 572 -12.599 108.232 6.771 1.00 0.00 C ATOM 4579 O ASP 572 -11.936 108.724 7.647 1.00 0.00 O ATOM 4580 CB ASP 572 -15.108 108.265 7.068 1.00 0.00 C ATOM 4581 CG ASP 572 -15.127 108.506 8.576 1.00 0.00 C ATOM 4582 OD1 ASP 572 -14.295 109.301 9.082 1.00 0.00 O ATOM 4583 OD2 ASP 572 -16.015 107.906 9.240 1.00 0.00 O ATOM 4584 N ILE 573 -12.136 107.127 6.077 1.00 0.00 N ATOM 4585 CA ILE 573 -10.857 106.610 6.372 1.00 0.00 C ATOM 4586 C ILE 573 -9.867 107.502 5.584 1.00 0.00 C ATOM 4587 O ILE 573 -9.370 108.393 6.205 1.00 0.00 O ATOM 4588 CB ILE 573 -10.683 105.081 6.026 1.00 0.00 C ATOM 4589 CG1 ILE 573 -11.605 104.196 6.878 1.00 0.00 C ATOM 4590 CG2 ILE 573 -9.190 104.664 6.284 1.00 0.00 C ATOM 4591 CD1 ILE 573 -11.684 102.722 6.348 1.00 0.00 C ATOM 4592 N LEU 574 -9.972 107.629 4.247 1.00 0.00 N ATOM 4593 CA LEU 574 -9.146 108.489 3.459 1.00 0.00 C ATOM 4594 C LEU 574 -9.602 110.010 3.526 1.00 0.00 C ATOM 4595 O LEU 574 -9.446 110.639 2.517 1.00 0.00 O ATOM 4596 CB LEU 574 -9.124 107.886 2.107 1.00 0.00 C ATOM 4597 CG LEU 574 -8.813 108.568 0.852 1.00 0.00 C ATOM 4598 CD1 LEU 574 -8.157 107.712 -0.235 1.00 0.00 C ATOM 4599 CD2 LEU 574 -10.193 109.138 0.471 1.00 0.00 C ATOM 4600 N ASN 575 -10.519 110.411 4.362 1.00 0.00 N ATOM 4601 CA ASN 575 -10.798 111.812 4.436 1.00 0.00 C ATOM 4602 C ASN 575 -10.856 112.376 5.919 1.00 0.00 C ATOM 4603 O ASN 575 -11.630 113.287 6.207 1.00 0.00 O ATOM 4604 CB ASN 575 -11.876 112.155 3.480 1.00 0.00 C ATOM 4605 CG ASN 575 -12.334 113.519 3.253 1.00 0.00 C ATOM 4606 OD1 ASN 575 -13.015 114.107 4.116 1.00 0.00 O ATOM 4607 ND2 ASN 575 -11.964 114.061 2.088 1.00 0.00 N ATOM 4608 N GLU 576 -10.490 111.458 6.862 1.00 0.00 N ATOM 4609 CA GLU 576 -10.218 111.597 8.330 1.00 0.00 C ATOM 4610 C GLU 576 -8.776 111.039 8.745 1.00 0.00 C ATOM 4611 O GLU 576 -8.500 110.612 9.867 1.00 0.00 O ATOM 4612 CB GLU 576 -11.343 111.006 9.204 1.00 0.00 C ATOM 4613 CG GLU 576 -11.262 111.443 10.694 1.00 0.00 C ATOM 4614 CD GLU 576 -11.764 112.880 10.736 1.00 0.00 C ATOM 4615 OE1 GLU 576 -11.078 113.764 10.157 1.00 0.00 O ATOM 4616 OE2 GLU 576 -12.843 113.113 11.342 1.00 0.00 O ATOM 4617 N ARG 577 -8.108 110.713 7.682 1.00 0.00 N ATOM 4618 CA ARG 577 -6.784 110.194 7.384 1.00 0.00 C ATOM 4619 C ARG 577 -6.898 110.745 5.977 1.00 0.00 C ATOM 4620 O ARG 577 -7.615 110.090 5.204 1.00 0.00 O ATOM 4621 CB ARG 577 -7.074 108.738 7.411 1.00 0.00 C ATOM 4622 CG ARG 577 -7.181 108.051 8.714 1.00 0.00 C ATOM 4623 CD ARG 577 -6.895 106.543 8.765 1.00 0.00 C ATOM 4624 NE ARG 577 -6.804 106.119 10.150 1.00 0.00 N ATOM 4625 CZ ARG 577 -7.892 105.650 10.754 1.00 0.00 C ATOM 4626 NH1 ARG 577 -8.977 105.609 10.020 1.00 0.00 H ATOM 4627 NH2 ARG 577 -7.878 105.295 12.067 1.00 0.00 H ATOM 4628 N ILE 578 -5.946 111.443 5.449 1.00 0.00 N ATOM 4629 CA ILE 578 -6.386 112.291 4.280 1.00 0.00 C ATOM 4630 C ILE 578 -7.643 113.042 5.000 1.00 0.00 C ATOM 4631 O ILE 578 -8.555 113.547 4.347 1.00 0.00 O ATOM 4632 CB ILE 578 -6.538 111.634 2.853 1.00 0.00 C ATOM 4633 CG1 ILE 578 -7.614 112.431 2.066 1.00 0.00 C ATOM 4634 CG2 ILE 578 -6.644 110.159 2.478 1.00 0.00 C ATOM 4635 CD1 ILE 578 -6.689 113.060 0.953 1.00 0.00 C ATOM 4636 N SER 579 -7.147 113.728 6.076 1.00 0.00 N ATOM 4637 CA SER 579 -7.765 114.454 7.233 1.00 0.00 C ATOM 4638 C SER 579 -7.457 113.458 8.388 1.00 0.00 C ATOM 4639 O SER 579 -8.100 113.578 9.435 1.00 0.00 O ATOM 4640 CB SER 579 -9.249 114.809 7.028 1.00 0.00 C ATOM 4641 OG SER 579 -9.473 115.874 6.060 1.00 0.00 O ATOM 4642 N ASN 580 -6.151 113.353 8.453 1.00 0.00 N ATOM 4643 CA ASN 580 -5.323 112.428 9.103 1.00 0.00 C ATOM 4644 C ASN 580 -5.129 112.351 10.617 1.00 0.00 C ATOM 4645 O ASN 580 -4.484 113.218 11.238 1.00 0.00 O ATOM 4646 CB ASN 580 -3.934 112.825 8.502 1.00 0.00 C ATOM 4647 CG ASN 580 -2.895 111.704 8.730 1.00 0.00 C ATOM 4648 OD1 ASN 580 -3.334 110.587 8.874 1.00 0.00 O ATOM 4649 ND2 ASN 580 -1.603 111.998 8.541 1.00 0.00 N ATOM 4650 N SER 581 -5.182 111.050 10.947 1.00 0.00 N ATOM 4651 CA SER 581 -4.827 110.476 12.195 1.00 0.00 C ATOM 4652 C SER 581 -3.624 109.646 11.638 1.00 0.00 C ATOM 4653 O SER 581 -3.891 108.601 11.024 1.00 0.00 O ATOM 4654 CB SER 581 -5.938 109.677 12.868 1.00 0.00 C ATOM 4655 OG SER 581 -6.477 108.594 12.095 1.00 0.00 O ATOM 4656 N LYS 582 -2.517 110.428 11.450 1.00 0.00 N ATOM 4657 CA LYS 582 -1.222 110.120 10.764 1.00 0.00 C ATOM 4658 C LYS 582 -1.065 108.641 10.283 1.00 0.00 C ATOM 4659 O LYS 582 -0.672 108.496 9.110 1.00 0.00 O ATOM 4660 CB LYS 582 -0.054 110.496 11.698 1.00 0.00 C ATOM 4661 CG LYS 582 1.336 110.277 11.068 1.00 0.00 C ATOM 4662 CD LYS 582 2.455 110.789 11.977 1.00 0.00 C ATOM 4663 CE LYS 582 3.859 110.630 11.393 1.00 0.00 C ATOM 4664 NZ LYS 582 4.855 111.240 12.302 1.00 0.00 N ATOM 4665 N LEU 583 -1.364 107.594 11.092 1.00 0.00 N ATOM 4666 CA LEU 583 -1.319 106.203 10.658 1.00 0.00 C ATOM 4667 C LEU 583 -2.016 106.034 9.247 1.00 0.00 C ATOM 4668 O LEU 583 -1.271 105.696 8.318 1.00 0.00 O ATOM 4669 CB LEU 583 -1.802 105.230 11.758 1.00 0.00 C ATOM 4670 CG LEU 583 -1.730 103.731 11.321 1.00 0.00 C ATOM 4671 CD1 LEU 583 -2.715 103.320 10.214 1.00 0.00 C ATOM 4672 CD2 LEU 583 -0.278 103.364 10.981 1.00 0.00 C ATOM 4673 N VAL 584 -3.318 106.406 9.041 1.00 0.00 N ATOM 4674 CA VAL 584 -3.895 106.117 7.705 1.00 0.00 C ATOM 4675 C VAL 584 -3.670 107.147 6.549 1.00 0.00 C ATOM 4676 O VAL 584 -3.450 106.659 5.444 1.00 0.00 O ATOM 4677 CB VAL 584 -5.027 105.172 7.586 1.00 0.00 C ATOM 4678 CG1 VAL 584 -5.535 104.835 6.233 1.00 0.00 C ATOM 4679 CG2 VAL 584 -5.200 104.098 8.559 1.00 0.00 C ATOM 4680 N ASN 585 -3.653 108.495 6.726 1.00 0.00 N ATOM 4681 CA ASN 585 -3.244 109.329 5.549 1.00 0.00 C ATOM 4682 C ASN 585 -1.972 108.901 4.769 1.00 0.00 C ATOM 4683 O ASN 585 -2.071 108.925 3.535 1.00 0.00 O ATOM 4684 CB ASN 585 -2.832 110.692 6.059 1.00 0.00 C ATOM 4685 CG ASN 585 -2.532 111.729 4.980 1.00 0.00 C ATOM 4686 OD1 ASN 585 -1.382 112.128 4.836 1.00 0.00 O ATOM 4687 ND2 ASN 585 -3.491 112.228 4.227 1.00 0.00 N ATOM 4688 N ASP 586 -0.752 108.879 5.367 1.00 0.00 N ATOM 4689 CA ASP 586 0.492 108.559 4.687 1.00 0.00 C ATOM 4690 C ASP 586 0.314 107.269 3.847 1.00 0.00 C ATOM 4691 O ASP 586 0.700 107.278 2.671 1.00 0.00 O ATOM 4692 CB ASP 586 1.609 108.519 5.737 1.00 0.00 C ATOM 4693 CG ASP 586 3.011 108.741 5.237 1.00 0.00 C ATOM 4694 OD1 ASP 586 3.505 108.135 4.297 1.00 0.00 O ATOM 4695 OD2 ASP 586 3.771 109.506 5.890 1.00 0.00 O ATOM 4696 N LYS 587 -0.057 106.149 4.479 1.00 0.00 N ATOM 4697 CA LYS 587 -0.362 104.898 3.841 1.00 0.00 C ATOM 4698 C LYS 587 -1.452 105.020 2.712 1.00 0.00 C ATOM 4699 O LYS 587 -1.305 104.270 1.739 1.00 0.00 O ATOM 4700 CB LYS 587 -0.832 103.892 4.915 1.00 0.00 C ATOM 4701 CG LYS 587 -0.693 102.419 4.481 1.00 0.00 C ATOM 4702 CD LYS 587 -0.740 101.476 5.683 1.00 0.00 C ATOM 4703 CE LYS 587 -0.270 100.054 5.376 1.00 0.00 C ATOM 4704 NZ LYS 587 -0.023 99.328 6.642 1.00 0.00 N ATOM 4705 N GLN 588 -2.513 105.860 2.835 1.00 0.00 N ATOM 4706 CA GLN 588 -3.531 105.967 1.799 1.00 0.00 C ATOM 4707 C GLN 588 -2.916 106.576 0.481 1.00 0.00 C ATOM 4708 O GLN 588 -3.354 106.117 -0.576 1.00 0.00 O ATOM 4709 CB GLN 588 -4.822 106.637 2.315 1.00 0.00 C ATOM 4710 CG GLN 588 -5.891 106.715 1.201 1.00 0.00 C ATOM 4711 CD GLN 588 -6.587 105.365 1.223 1.00 0.00 C ATOM 4712 OE1 GLN 588 -7.812 105.289 1.327 1.00 0.00 O ATOM 4713 NE2 GLN 588 -5.796 104.265 1.113 1.00 0.00 N ATOM 4714 N LYS 589 -2.112 107.682 0.509 1.00 0.00 N ATOM 4715 CA LYS 589 -1.460 108.165 -0.730 1.00 0.00 C ATOM 4716 C LYS 589 -0.596 107.021 -1.377 1.00 0.00 C ATOM 4717 O LYS 589 -0.637 106.927 -2.601 1.00 0.00 O ATOM 4718 CB LYS 589 -0.596 109.383 -0.428 1.00 0.00 C ATOM 4719 CG LYS 589 -1.355 110.592 0.027 1.00 0.00 C ATOM 4720 CD LYS 589 -0.480 111.678 0.654 1.00 0.00 C ATOM 4721 CE LYS 589 -0.037 111.361 2.082 1.00 0.00 C ATOM 4722 NZ LYS 589 0.805 112.460 2.605 1.00 0.00 N ATOM 4723 N LYS 590 0.414 106.431 -0.695 1.00 0.00 N ATOM 4724 CA LYS 590 1.193 105.286 -1.206 1.00 0.00 C ATOM 4725 C LYS 590 0.288 104.152 -1.836 1.00 0.00 C ATOM 4726 O LYS 590 0.773 103.546 -2.774 1.00 0.00 O ATOM 4727 CB LYS 590 2.031 104.721 -0.055 1.00 0.00 C ATOM 4728 CG LYS 590 3.179 105.618 0.305 1.00 0.00 C ATOM 4729 CD LYS 590 4.129 104.966 1.289 1.00 0.00 C ATOM 4730 CE LYS 590 5.388 105.793 1.504 1.00 0.00 C ATOM 4731 NZ LYS 590 6.227 105.944 0.284 1.00 0.00 N ATOM 4732 N HIS 591 -0.770 103.662 -1.150 1.00 0.00 N ATOM 4733 CA HIS 591 -1.717 102.648 -1.611 1.00 0.00 C ATOM 4734 C HIS 591 -2.456 103.156 -2.908 1.00 0.00 C ATOM 4735 O HIS 591 -2.744 102.288 -3.743 1.00 0.00 O ATOM 4736 CB HIS 591 -2.695 102.294 -0.461 1.00 0.00 C ATOM 4737 CG HIS 591 -3.558 101.076 -0.873 1.00 0.00 C ATOM 4738 ND1 HIS 591 -4.403 100.441 0.010 1.00 0.00 N ATOM 4739 CD2 HIS 591 -3.654 100.376 -2.039 1.00 0.00 C ATOM 4740 CE1 HIS 591 -4.966 99.401 -0.660 1.00 0.00 C ATOM 4741 NE2 HIS 591 -4.542 99.323 -1.908 1.00 0.00 N ATOM 4742 N ILE 592 -3.064 104.378 -2.952 1.00 0.00 N ATOM 4743 CA ILE 592 -3.667 104.851 -4.224 1.00 0.00 C ATOM 4744 C ILE 592 -2.580 104.747 -5.375 1.00 0.00 C ATOM 4745 O ILE 592 -2.946 104.194 -6.427 1.00 0.00 O ATOM 4746 CB ILE 592 -4.316 106.258 -4.153 1.00 0.00 C ATOM 4747 CG1 ILE 592 -3.145 107.290 -3.962 1.00 0.00 C ATOM 4748 CG2 ILE 592 -5.412 106.403 -3.148 1.00 0.00 C ATOM 4749 CD1 ILE 592 -3.770 108.623 -4.159 1.00 0.00 C ATOM 4750 N LEU 593 -1.410 105.444 -5.304 1.00 0.00 N ATOM 4751 CA LEU 593 -0.380 105.248 -6.330 1.00 0.00 C ATOM 4752 C LEU 593 -0.008 103.737 -6.485 1.00 0.00 C ATOM 4753 O LEU 593 0.549 103.397 -7.521 1.00 0.00 O ATOM 4754 CB LEU 593 0.860 106.114 -6.065 1.00 0.00 C ATOM 4755 CG LEU 593 0.624 107.587 -6.358 1.00 0.00 C ATOM 4756 CD1 LEU 593 -0.276 108.231 -5.296 1.00 0.00 C ATOM 4757 CD2 LEU 593 1.933 108.345 -6.584 1.00 0.00 C ATOM 4758 N GLY 594 -0.180 102.851 -5.460 1.00 0.00 N ATOM 4759 CA GLY 594 0.255 101.477 -5.695 1.00 0.00 C ATOM 4760 C GLY 594 -0.754 100.592 -6.481 1.00 0.00 C ATOM 4761 O GLY 594 -0.391 100.217 -7.598 1.00 0.00 O ATOM 4762 N GLU 595 -1.977 100.314 -5.977 1.00 0.00 N ATOM 4763 CA GLU 595 -2.869 99.400 -6.708 1.00 0.00 C ATOM 4764 C GLU 595 -4.297 99.980 -7.094 1.00 0.00 C ATOM 4765 O GLU 595 -4.936 99.315 -7.918 1.00 0.00 O ATOM 4766 CB GLU 595 -3.100 98.136 -5.864 1.00 0.00 C ATOM 4767 CG GLU 595 -3.657 96.993 -6.758 1.00 0.00 C ATOM 4768 CD GLU 595 -3.448 95.692 -6.004 1.00 0.00 C ATOM 4769 OE1 GLU 595 -3.410 95.729 -4.744 1.00 0.00 O ATOM 4770 OE2 GLU 595 -3.314 94.638 -6.683 1.00 0.00 O ATOM 4771 N LEU 596 -4.586 101.291 -6.965 1.00 0.00 N ATOM 4772 CA LEU 596 -5.974 101.707 -7.280 1.00 0.00 C ATOM 4773 C LEU 596 -5.953 103.018 -8.031 1.00 0.00 C ATOM 4774 O LEU 596 -5.597 104.072 -7.470 1.00 0.00 O ATOM 4775 CB LEU 596 -6.817 101.815 -6.011 1.00 0.00 C ATOM 4776 CG LEU 596 -6.902 100.561 -5.190 1.00 0.00 C ATOM 4777 CD1 LEU 596 -7.438 99.383 -6.013 1.00 0.00 C ATOM 4778 CD2 LEU 596 -5.557 100.246 -4.526 1.00 0.00 C ATOM 4779 N TYR 597 -6.651 102.985 -9.163 1.00 0.00 N ATOM 4780 CA TYR 597 -6.680 104.123 -10.100 1.00 0.00 C ATOM 4781 C TYR 597 -5.237 104.662 -10.464 1.00 0.00 C ATOM 4782 O TYR 597 -5.133 105.697 -11.151 1.00 0.00 O ATOM 4783 CB TYR 597 -7.631 105.254 -9.688 1.00 0.00 C ATOM 4784 CG TYR 597 -9.049 104.985 -10.026 1.00 0.00 C ATOM 4785 CD1 TYR 597 -9.487 104.852 -11.344 1.00 0.00 C ATOM 4786 CD2 TYR 597 -10.002 104.941 -9.010 1.00 0.00 C ATOM 4787 CE1 TYR 597 -10.839 104.667 -11.647 1.00 0.00 C ATOM 4788 CE2 TYR 597 -11.355 104.756 -9.296 1.00 0.00 C ATOM 4789 CZ TYR 597 -11.777 104.617 -10.615 1.00 0.00 C ATOM 4790 OH TYR 597 -13.112 104.430 -10.860 1.00 0.00 H ATOM 4791 N LEU 598 -4.191 103.803 -10.351 1.00 0.00 N ATOM 4792 CA LEU 598 -2.818 104.069 -10.713 1.00 0.00 C ATOM 4793 C LEU 598 -2.491 103.083 -11.872 1.00 0.00 C ATOM 4794 O LEU 598 -2.262 103.549 -12.987 1.00 0.00 O ATOM 4795 CB LEU 598 -1.801 103.784 -9.597 1.00 0.00 C ATOM 4796 CG LEU 598 -0.389 104.296 -9.853 1.00 0.00 C ATOM 4797 CD1 LEU 598 0.315 103.507 -10.967 1.00 0.00 C ATOM 4798 CD2 LEU 598 -0.376 105.816 -10.087 1.00 0.00 C ATOM 4799 N PHE 599 -2.288 101.773 -11.552 1.00 0.00 N ATOM 4800 CA PHE 599 -2.079 100.725 -12.536 1.00 0.00 C ATOM 4801 C PHE 599 -3.358 100.750 -13.447 1.00 0.00 C ATOM 4802 O PHE 599 -3.236 100.392 -14.628 1.00 0.00 O ATOM 4803 CB PHE 599 -1.966 99.366 -11.805 1.00 0.00 C ATOM 4804 CG PHE 599 -1.217 98.248 -12.525 1.00 0.00 C ATOM 4805 CD1 PHE 599 -1.914 97.451 -13.437 1.00 0.00 C ATOM 4806 CD2 PHE 599 0.121 97.953 -12.293 1.00 0.00 C ATOM 4807 CE1 PHE 599 -1.341 96.410 -14.133 1.00 0.00 C ATOM 4808 CE2 PHE 599 0.763 96.880 -12.973 1.00 0.00 C ATOM 4809 CZ PHE 599 0.014 96.135 -13.878 1.00 0.00 C ATOM 4810 N LEU 600 -4.542 100.913 -12.817 1.00 0.00 N ATOM 4811 CA LEU 600 -5.774 101.058 -13.467 1.00 0.00 C ATOM 4812 C LEU 600 -6.139 102.497 -13.831 1.00 0.00 C ATOM 4813 O LEU 600 -6.356 103.354 -12.974 1.00 0.00 O ATOM 4814 CB LEU 600 -6.967 100.501 -12.702 1.00 0.00 C ATOM 4815 CG LEU 600 -8.320 100.526 -13.433 1.00 0.00 C ATOM 4816 CD1 LEU 600 -8.334 99.486 -14.566 1.00 0.00 C ATOM 4817 CD2 LEU 600 -9.510 100.396 -12.475 1.00 0.00 C ATOM 4818 N ASN 601 -5.856 102.769 -15.053 1.00 0.00 N ATOM 4819 CA ASN 601 -6.255 103.962 -15.770 1.00 0.00 C ATOM 4820 C ASN 601 -7.407 103.373 -16.675 1.00 0.00 C ATOM 4821 O ASN 601 -8.243 102.614 -16.075 1.00 0.00 O ATOM 4822 CB ASN 601 -5.157 104.824 -16.382 1.00 0.00 C ATOM 4823 CG ASN 601 -4.329 105.520 -15.337 1.00 0.00 C ATOM 4824 OD1 ASN 601 -3.149 105.755 -15.569 1.00 0.00 O ATOM 4825 ND2 ASN 601 -5.033 105.981 -14.294 1.00 0.00 N ATOM 4826 N ASP 602 -7.835 104.060 -17.726 1.00 0.00 N ATOM 4827 CA ASP 602 -8.827 103.284 -18.540 1.00 0.00 C ATOM 4828 C ASP 602 -8.290 101.790 -18.603 1.00 0.00 C ATOM 4829 O ASP 602 -8.863 100.857 -18.016 1.00 0.00 O ATOM 4830 CB ASP 602 -8.909 103.673 -19.992 1.00 0.00 C ATOM 4831 CG ASP 602 -9.125 105.114 -20.216 1.00 0.00 C ATOM 4832 OD1 ASP 602 -10.080 105.667 -19.611 1.00 0.00 O ATOM 4833 OD2 ASP 602 -8.345 105.701 -21.013 1.00 0.00 O ATOM 4834 N ASN 603 -7.010 101.736 -19.076 1.00 0.00 N ATOM 4835 CA ASN 603 -6.222 100.533 -19.332 1.00 0.00 C ATOM 4836 C ASN 603 -5.423 100.119 -18.068 1.00 0.00 C ATOM 4837 O ASN 603 -4.893 101.001 -17.380 1.00 0.00 O ATOM 4838 CB ASN 603 -5.370 100.821 -20.602 1.00 0.00 C ATOM 4839 CG ASN 603 -4.902 99.503 -21.258 1.00 0.00 C ATOM 4840 OD1 ASN 603 -5.348 98.413 -20.843 1.00 0.00 O ATOM 4841 ND2 ASN 603 -4.054 99.653 -22.284 1.00 0.00 N ATOM 4842 N GLY 604 -4.871 98.913 -18.132 1.00 0.00 N ATOM 4843 CA GLY 604 -4.172 98.330 -16.975 1.00 0.00 C ATOM 4844 C GLY 604 -4.946 97.170 -16.286 1.00 0.00 C ATOM 4845 O GLY 604 -4.330 96.123 -16.080 1.00 0.00 O ATOM 4846 N TYR 605 -6.276 97.214 -16.388 1.00 0.00 N ATOM 4847 CA TYR 605 -7.242 96.245 -15.816 1.00 0.00 C ATOM 4848 C TYR 605 -7.160 96.067 -14.256 1.00 0.00 C ATOM 4849 O TYR 605 -7.143 94.906 -13.812 1.00 0.00 O ATOM 4850 CB TYR 605 -7.331 94.985 -16.593 1.00 0.00 C ATOM 4851 CG TYR 605 -8.601 94.300 -16.612 1.00 0.00 C ATOM 4852 CD1 TYR 605 -9.571 94.759 -17.473 1.00 0.00 C ATOM 4853 CD2 TYR 605 -8.873 93.186 -15.858 1.00 0.00 C ATOM 4854 CE1 TYR 605 -10.792 94.136 -17.566 1.00 0.00 C ATOM 4855 CE2 TYR 605 -10.092 92.552 -15.944 1.00 0.00 C ATOM 4856 CZ TYR 605 -11.056 93.027 -16.800 1.00 0.00 C ATOM 4857 OH TYR 605 -12.308 92.381 -16.896 1.00 0.00 H ATOM 4858 N LEU 606 -7.180 97.085 -13.465 1.00 0.00 N ATOM 4859 CA LEU 606 -7.260 97.009 -12.016 1.00 0.00 C ATOM 4860 C LEU 606 -8.535 97.679 -11.525 1.00 0.00 C ATOM 4861 O LEU 606 -9.495 97.658 -12.290 1.00 0.00 O ATOM 4862 CB LEU 606 -6.008 97.512 -11.277 1.00 0.00 C ATOM 4863 CG LEU 606 -4.800 96.664 -11.478 1.00 0.00 C ATOM 4864 CD1 LEU 606 -4.487 96.510 -12.965 1.00 0.00 C ATOM 4865 CD2 LEU 606 -3.595 97.185 -10.693 1.00 0.00 C ATOM 4866 N LYS 607 -8.747 97.442 -10.248 1.00 0.00 N ATOM 4867 CA LYS 607 -9.877 98.040 -9.648 1.00 0.00 C ATOM 4868 C LYS 607 -9.546 99.507 -9.142 1.00 0.00 C ATOM 4869 O LYS 607 -8.412 100.003 -9.138 1.00 0.00 O ATOM 4870 CB LYS 607 -10.363 97.049 -8.576 1.00 0.00 C ATOM 4871 CG LYS 607 -9.408 97.068 -7.345 1.00 0.00 C ATOM 4872 CD LYS 607 -10.041 96.679 -6.010 1.00 0.00 C ATOM 4873 CE LYS 607 -9.072 96.810 -4.834 1.00 0.00 C ATOM 4874 NZ LYS 607 -9.809 97.221 -3.622 1.00 0.00 N ATOM 4875 N SER 608 -10.613 100.155 -8.837 1.00 0.00 N ATOM 4876 CA SER 608 -10.695 101.509 -8.392 1.00 0.00 C ATOM 4877 C SER 608 -10.379 101.537 -6.876 1.00 0.00 C ATOM 4878 O SER 608 -9.939 100.527 -6.294 1.00 0.00 O ATOM 4879 CB SER 608 -12.137 101.941 -8.705 1.00 0.00 C ATOM 4880 OG SER 608 -13.161 101.287 -7.952 1.00 0.00 O ATOM 4881 N ILE 609 -10.514 102.686 -6.255 1.00 0.00 N ATOM 4882 CA ILE 609 -10.338 102.764 -4.811 1.00 0.00 C ATOM 4883 C ILE 609 -11.584 101.995 -4.201 1.00 0.00 C ATOM 4884 O ILE 609 -11.977 100.942 -4.731 1.00 0.00 O ATOM 4885 CB ILE 609 -10.297 104.280 -4.499 1.00 0.00 C ATOM 4886 CG1 ILE 609 -9.075 104.913 -5.168 1.00 0.00 C ATOM 4887 CG2 ILE 609 -10.122 104.466 -2.978 1.00 0.00 C ATOM 4888 CD1 ILE 609 -7.667 104.381 -4.796 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 73.65 47.3 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 64.07 57.1 70 100.0 70 ARMSMC SURFACE . . . . . . . . 75.36 42.2 90 100.0 90 ARMSMC BURIED . . . . . . . . 65.43 70.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.77 37.7 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 88.42 38.5 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 77.51 48.5 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 91.93 34.9 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 73.66 50.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.15 36.2 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 73.96 46.7 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 90.44 35.5 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 89.49 34.2 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 82.24 44.4 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 101.03 25.0 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 91.46 30.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 98.27 33.3 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 96.27 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 122.09 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.00 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 66.00 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 36.81 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 72.20 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 8.66 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.44 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.44 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1507 CRMSCA SECONDARY STRUCTURE . . 7.96 35 100.0 35 CRMSCA SURFACE . . . . . . . . 8.42 46 100.0 46 CRMSCA BURIED . . . . . . . . 8.53 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.54 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 7.97 174 100.0 174 CRMSMC SURFACE . . . . . . . . 8.55 228 100.0 228 CRMSMC BURIED . . . . . . . . 8.51 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.03 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 9.94 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 9.80 151 100.0 151 CRMSSC SURFACE . . . . . . . . 10.09 196 100.0 196 CRMSSC BURIED . . . . . . . . 9.72 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.25 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 8.88 291 100.0 291 CRMSALL SURFACE . . . . . . . . 9.29 380 100.0 380 CRMSALL BURIED . . . . . . . . 9.05 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.780 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 7.482 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 7.682 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 8.227 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.844 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 7.456 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 7.787 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 8.103 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.267 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 9.241 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 9.087 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 9.260 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 9.305 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.494 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 8.223 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 8.469 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 8.616 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 8 45 56 56 DISTCA CA (P) 0.00 1.79 3.57 14.29 80.36 56 DISTCA CA (RMS) 0.00 1.40 2.11 3.52 6.82 DISTCA ALL (N) 0 3 18 70 326 459 459 DISTALL ALL (P) 0.00 0.65 3.92 15.25 71.02 459 DISTALL ALL (RMS) 0.00 1.65 2.53 3.83 6.93 DISTALL END of the results output