####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 56 ( 459), selected 56 , name T0547TS037_1-D4 # Molecule2: number of CA atoms 56 ( 459), selected 56 , name T0547-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547TS037_1-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 562 - 603 4.95 9.80 LONGEST_CONTINUOUS_SEGMENT: 42 563 - 604 4.72 9.83 LONGEST_CONTINUOUS_SEGMENT: 42 564 - 605 4.63 9.96 LONGEST_CONTINUOUS_SEGMENT: 42 565 - 606 4.91 10.14 LCS_AVERAGE: 68.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 575 - 594 2.00 11.46 LCS_AVERAGE: 30.55 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 582 - 595 0.87 11.94 LCS_AVERAGE: 18.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 56 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 554 Q 554 13 19 27 4 5 10 13 17 18 19 21 22 23 25 28 30 30 31 34 34 35 39 39 LCS_GDT S 555 S 555 13 19 27 4 10 12 15 17 18 19 21 22 25 29 29 31 32 33 34 37 44 45 47 LCS_GDT I 556 I 556 13 19 27 7 10 12 15 17 18 19 22 25 28 29 29 32 33 34 36 41 44 45 47 LCS_GDT L 557 L 557 13 19 27 7 10 12 15 17 18 19 22 25 28 29 32 34 38 39 41 42 44 45 47 LCS_GDT D 558 D 558 13 19 27 6 10 12 15 17 18 19 22 25 28 29 29 32 33 34 37 41 44 45 47 LCS_GDT T 559 T 559 13 19 27 6 10 12 15 17 18 19 22 25 28 29 29 31 32 34 36 37 38 45 47 LCS_GDT L 560 L 560 13 19 27 7 10 12 15 17 18 19 22 25 28 29 30 32 34 37 40 42 44 45 47 LCS_GDT E 561 E 561 13 19 27 7 10 12 15 17 18 19 22 25 28 29 32 34 38 39 41 42 44 45 47 LCS_GDT D 562 D 562 13 19 42 7 10 12 15 17 18 19 22 25 28 29 30 32 33 34 36 39 44 45 47 LCS_GDT L 563 L 563 13 19 42 7 10 12 15 17 18 19 22 25 28 29 30 32 33 34 37 39 44 45 47 LCS_GDT D 564 D 564 13 19 42 7 10 12 15 17 18 19 22 25 28 29 32 34 38 39 41 42 44 45 47 LCS_GDT Y 565 Y 565 13 19 42 4 10 12 15 17 18 19 22 25 28 35 38 38 39 39 41 42 44 45 47 LCS_GDT D 566 D 566 13 19 42 5 10 12 15 17 18 21 28 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT I 567 I 567 13 19 42 5 6 10 15 17 18 21 30 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT H 568 H 568 7 19 42 5 5 10 15 17 19 27 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT A 569 A 569 9 19 42 6 7 11 15 17 21 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT I 570 I 570 9 19 42 6 8 11 15 17 18 27 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT M 571 M 571 9 19 42 6 8 11 15 17 22 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT D 572 D 572 9 19 42 6 8 11 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT I 573 I 573 9 14 42 6 8 11 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 574 L 574 9 14 42 6 8 11 13 14 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT N 575 N 575 9 20 42 4 8 9 13 16 24 26 30 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT E 576 E 576 9 20 42 4 8 11 14 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT R 577 R 577 9 20 42 3 8 11 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT I 578 I 578 9 20 42 4 7 11 13 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT S 579 S 579 9 20 42 4 7 11 13 16 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT N 580 N 580 9 20 42 4 7 11 13 16 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT S 581 S 581 9 20 42 4 7 11 13 13 23 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT K 582 K 582 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 583 L 583 14 20 42 4 11 13 15 18 20 26 31 35 37 38 38 38 39 39 40 41 43 44 46 LCS_GDT V 584 V 584 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 43 45 47 LCS_GDT N 585 N 585 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT D 586 D 586 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT K 587 K 587 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT Q 588 Q 588 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT K 589 K 589 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT K 590 K 590 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT H 591 H 591 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT I 592 I 592 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 593 L 593 14 20 42 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT G 594 G 594 14 20 42 6 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT E 595 E 595 14 18 42 7 8 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 596 L 596 10 18 42 7 8 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT Y 597 Y 597 10 18 42 7 8 10 15 18 22 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 598 L 598 10 18 42 7 8 10 13 18 22 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT F 599 F 599 10 18 42 7 8 10 12 14 21 29 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT L 600 L 600 10 17 42 7 8 10 12 15 21 27 33 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT N 601 N 601 10 14 42 7 8 9 11 14 17 21 30 35 37 38 38 38 39 39 41 42 44 45 47 LCS_GDT D 602 D 602 5 12 42 3 4 5 6 6 21 24 33 35 37 38 38 38 39 39 41 42 43 45 47 LCS_GDT N 603 N 603 5 6 42 3 4 6 17 20 24 29 33 35 37 38 38 38 39 39 41 42 43 44 45 LCS_GDT G 604 G 604 5 6 42 3 4 5 8 9 16 22 26 28 30 33 34 35 38 39 39 41 41 44 45 LCS_GDT Y 605 Y 605 4 6 42 3 4 4 4 5 7 7 9 10 13 15 23 29 31 33 35 36 40 41 44 LCS_GDT L 606 L 606 4 5 42 3 4 4 4 5 7 7 7 10 11 12 16 18 18 20 24 25 25 33 35 LCS_GDT K 607 K 607 3 5 16 3 3 4 4 5 5 7 9 10 11 14 17 18 22 23 28 30 32 33 35 LCS_GDT S 608 S 608 3 4 16 3 3 4 4 4 5 7 9 10 12 16 18 19 22 23 24 25 25 26 28 LCS_GDT I 609 I 609 3 4 16 0 2 4 4 4 5 5 7 9 11 14 17 18 22 23 24 25 25 26 26 LCS_AVERAGE LCS_A: 39.39 ( 18.94 30.55 68.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 13 17 20 24 29 33 35 37 38 38 38 39 39 41 42 44 45 47 GDT PERCENT_AT 14.29 21.43 23.21 30.36 35.71 42.86 51.79 58.93 62.50 66.07 67.86 67.86 67.86 69.64 69.64 73.21 75.00 78.57 80.36 83.93 GDT RMS_LOCAL 0.30 0.52 0.61 1.33 1.69 2.16 2.62 2.88 2.98 3.20 3.29 3.29 3.29 3.51 3.51 4.42 4.68 5.78 5.64 6.05 GDT RMS_ALL_AT 12.54 11.93 12.17 11.01 10.79 10.65 10.47 10.34 10.36 10.30 10.25 10.25 10.25 10.15 10.15 9.86 9.81 10.26 9.99 10.18 # Checking swapping # possible swapping detected: Y 565 Y 565 # possible swapping detected: D 572 D 572 # possible swapping detected: D 602 D 602 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 554 Q 554 23.807 0 0.106 0.547 25.961 0.000 0.000 LGA S 555 S 555 18.290 0 0.064 0.132 20.285 0.000 0.000 LGA I 556 I 556 15.440 0 0.089 1.238 16.349 0.000 0.000 LGA L 557 L 557 12.414 0 0.045 0.419 14.052 0.000 0.357 LGA D 558 D 558 17.685 0 0.033 0.201 20.848 0.000 0.000 LGA T 559 T 559 18.666 0 0.039 0.087 20.900 0.000 0.000 LGA L 560 L 560 13.681 0 0.052 0.071 15.271 0.000 0.000 LGA E 561 E 561 14.074 0 0.074 0.843 17.233 0.000 0.000 LGA D 562 D 562 18.804 0 0.127 1.078 23.270 0.000 0.000 LGA L 563 L 563 16.560 0 0.103 0.146 19.685 0.000 0.000 LGA D 564 D 564 13.117 0 0.036 0.777 16.498 0.000 0.000 LGA Y 565 Y 565 9.021 0 0.160 0.981 12.658 1.905 0.754 LGA D 566 D 566 6.304 0 0.155 0.994 8.293 23.214 18.214 LGA I 567 I 567 5.631 0 0.110 0.624 9.563 29.762 20.179 LGA H 568 H 568 4.334 0 0.248 0.988 6.751 40.476 29.381 LGA A 569 A 569 3.301 0 0.238 0.241 3.593 50.119 50.095 LGA I 570 I 570 3.937 0 0.059 1.212 7.372 43.333 33.155 LGA M 571 M 571 3.563 0 0.043 1.358 7.469 48.452 38.214 LGA D 572 D 572 2.040 0 0.066 0.057 2.639 66.905 68.869 LGA I 573 I 573 1.697 0 0.038 1.542 3.995 70.833 62.321 LGA L 574 L 574 3.599 0 0.112 0.173 6.060 45.000 35.774 LGA N 575 N 575 4.588 0 0.141 0.520 7.903 37.262 27.738 LGA E 576 E 576 2.980 0 0.060 0.844 5.152 53.571 50.741 LGA R 577 R 577 2.201 0 0.093 1.260 5.024 62.857 56.970 LGA I 578 I 578 2.769 0 0.145 0.190 3.899 53.810 55.536 LGA S 579 S 579 3.849 0 0.039 0.581 5.875 43.452 38.730 LGA N 580 N 580 3.876 0 0.269 0.269 4.777 45.000 40.417 LGA S 581 S 581 3.879 0 0.687 0.800 4.994 43.690 41.587 LGA K 582 K 582 1.670 0 0.300 0.933 5.965 58.929 53.492 LGA L 583 L 583 4.174 0 0.461 0.450 6.779 48.571 33.571 LGA V 584 V 584 3.060 0 0.052 0.103 3.587 51.905 53.129 LGA N 585 N 585 2.171 0 0.037 1.313 4.160 68.810 61.429 LGA D 586 D 586 0.978 0 0.052 0.845 3.606 85.952 73.810 LGA K 587 K 587 1.909 0 0.032 1.653 4.412 72.857 67.090 LGA Q 588 Q 588 2.427 0 0.197 0.386 4.907 64.762 55.344 LGA K 589 K 589 1.973 0 0.058 0.660 3.618 68.810 66.190 LGA K 590 K 590 1.660 0 0.034 0.909 5.374 68.810 57.460 LGA H 591 H 591 2.495 0 0.047 1.187 5.886 60.952 48.524 LGA I 592 I 592 2.586 0 0.162 0.643 2.860 59.048 59.048 LGA L 593 L 593 2.626 0 0.054 0.314 2.626 59.048 61.964 LGA G 594 G 594 2.645 0 0.040 0.040 2.735 62.976 62.976 LGA E 595 E 595 1.810 0 0.215 0.457 4.664 75.119 60.794 LGA L 596 L 596 0.951 0 0.175 0.200 2.125 79.524 81.607 LGA Y 597 Y 597 2.452 0 0.160 1.177 12.677 61.190 28.651 LGA L 598 L 598 2.296 0 0.062 1.448 3.404 59.167 62.083 LGA F 599 F 599 3.468 0 0.133 0.218 4.602 45.476 45.931 LGA L 600 L 600 4.035 0 0.121 1.135 6.316 30.952 43.393 LGA N 601 N 601 6.321 0 0.033 0.890 12.566 21.667 11.190 LGA D 602 D 602 3.869 0 0.668 0.668 8.757 53.810 32.024 LGA N 603 N 603 3.176 0 0.552 0.893 7.296 36.548 32.738 LGA G 604 G 604 9.862 0 0.056 0.056 13.564 2.619 2.619 LGA Y 605 Y 605 13.224 0 0.581 0.945 15.115 0.000 0.000 LGA L 606 L 606 17.142 0 0.705 1.105 20.546 0.000 0.000 LGA K 607 K 607 18.524 0 0.079 1.341 22.903 0.000 0.000 LGA S 608 S 608 24.595 0 0.650 0.783 26.753 0.000 0.000 LGA I 609 I 609 28.786 0 0.356 1.277 31.896 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 56 224 224 100.00 459 459 100.00 56 SUMMARY(RMSD_GDC): 9.208 9.221 9.553 36.735 32.573 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 56 56 4.0 33 2.88 45.982 43.954 1.107 LGA_LOCAL RMSD: 2.880 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.340 Number of assigned atoms: 56 Std_ASGN_ATOMS RMSD: 9.208 Standard rmsd on all 56 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.449285 * X + 0.228655 * Y + 0.863632 * Z + -50.116119 Y_new = -0.432007 * X + 0.790552 * Y + -0.434048 * Z + 116.468803 Z_new = -0.781993 * X + -0.568107 * Y + -0.256403 * Z + 38.687202 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.375798 0.897857 -1.994754 [DEG: -136.1232 51.4434 -114.2910 ] ZXZ: 1.105083 1.830095 -2.199078 [DEG: 63.3166 104.8567 -125.9979 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547TS037_1-D4 REMARK 2: T0547-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547TS037_1-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 56 56 4.0 33 2.88 43.954 9.21 REMARK ---------------------------------------------------------- MOLECULE T0547TS037_1-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0547 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 4430 N GLN 554 -13.251 96.929 -0.460 1.00 0.00 N ATOM 4431 CA GLN 554 -13.525 97.953 -1.456 1.00 0.00 C ATOM 4432 C GLN 554 -12.282 98.932 -1.397 1.00 0.00 C ATOM 4433 O GLN 554 -11.915 99.493 -0.363 1.00 0.00 O ATOM 4434 CB GLN 554 -14.827 98.685 -1.149 1.00 0.00 C ATOM 4435 CG GLN 554 -15.256 99.666 -2.225 1.00 0.00 C ATOM 4436 CD GLN 554 -16.598 100.302 -1.926 1.00 0.00 C ATOM 4437 OE1 GLN 554 -17.127 100.170 -0.821 1.00 0.00 O ATOM 4438 NE2 GLN 554 -17.156 100.994 -2.911 1.00 0.00 N ATOM 4439 N SER 555 -11.754 99.140 -2.622 1.00 0.00 N ATOM 4440 CA SER 555 -10.574 99.985 -2.878 1.00 0.00 C ATOM 4441 C SER 555 -10.998 101.446 -3.225 1.00 0.00 C ATOM 4442 O SER 555 -12.165 101.706 -3.580 1.00 0.00 O ATOM 4443 CB SER 555 -9.758 99.305 -4.022 1.00 0.00 C ATOM 4444 OG SER 555 -10.333 99.341 -5.327 1.00 0.00 O ATOM 4445 N ILE 556 -10.174 102.429 -2.809 1.00 0.00 N ATOM 4446 CA ILE 556 -10.404 103.844 -3.142 1.00 0.00 C ATOM 4447 C ILE 556 -10.897 103.969 -4.646 1.00 0.00 C ATOM 4448 O ILE 556 -11.671 104.870 -4.875 1.00 0.00 O ATOM 4449 CB ILE 556 -9.152 104.690 -2.777 1.00 0.00 C ATOM 4450 CG1 ILE 556 -9.467 106.152 -2.788 1.00 0.00 C ATOM 4451 CG2 ILE 556 -8.005 104.363 -3.756 1.00 0.00 C ATOM 4452 CD1 ILE 556 -10.484 106.570 -1.683 1.00 0.00 C ATOM 4453 N LEU 557 -10.255 103.327 -5.651 1.00 0.00 N ATOM 4454 CA LEU 557 -10.694 103.304 -7.034 1.00 0.00 C ATOM 4455 C LEU 557 -12.265 103.324 -7.161 1.00 0.00 C ATOM 4456 O LEU 557 -12.737 104.135 -7.967 1.00 0.00 O ATOM 4457 CB LEU 557 -10.311 101.878 -7.551 1.00 0.00 C ATOM 4458 CG LEU 557 -10.618 101.609 -9.059 1.00 0.00 C ATOM 4459 CD1 LEU 557 -9.997 102.653 -9.974 1.00 0.00 C ATOM 4460 CD2 LEU 557 -10.164 100.216 -9.462 1.00 0.00 C ATOM 4461 N ASP 558 -13.041 102.424 -6.506 1.00 0.00 N ATOM 4462 CA ASP 558 -14.502 102.401 -6.553 1.00 0.00 C ATOM 4463 C ASP 558 -15.042 103.768 -6.048 1.00 0.00 C ATOM 4464 O ASP 558 -15.915 104.302 -6.722 1.00 0.00 O ATOM 4465 CB ASP 558 -15.047 101.212 -5.753 1.00 0.00 C ATOM 4466 CG ASP 558 -14.780 99.894 -6.412 1.00 0.00 C ATOM 4467 OD1 ASP 558 -14.426 99.886 -7.610 1.00 0.00 O ATOM 4468 OD2 ASP 558 -14.925 98.855 -5.734 1.00 0.00 O ATOM 4469 N THR 559 -14.742 104.222 -4.806 1.00 0.00 N ATOM 4470 CA THR 559 -15.138 105.531 -4.248 1.00 0.00 C ATOM 4471 C THR 559 -14.729 106.676 -5.222 1.00 0.00 C ATOM 4472 O THR 559 -15.582 107.534 -5.433 1.00 0.00 O ATOM 4473 CB THR 559 -14.684 105.729 -2.757 1.00 0.00 C ATOM 4474 OG1 THR 559 -15.253 104.678 -1.890 1.00 0.00 O ATOM 4475 CG2 THR 559 -15.132 107.114 -2.223 1.00 0.00 C ATOM 4476 N LEU 560 -13.481 106.746 -5.753 1.00 0.00 N ATOM 4477 CA LEU 560 -13.058 107.769 -6.737 1.00 0.00 C ATOM 4478 C LEU 560 -14.007 107.767 -7.997 1.00 0.00 C ATOM 4479 O LEU 560 -14.453 108.845 -8.404 1.00 0.00 O ATOM 4480 CB LEU 560 -11.611 107.486 -7.081 1.00 0.00 C ATOM 4481 CG LEU 560 -10.559 107.790 -6.047 1.00 0.00 C ATOM 4482 CD1 LEU 560 -9.179 107.349 -6.514 1.00 0.00 C ATOM 4483 CD2 LEU 560 -10.547 109.266 -5.686 1.00 0.00 C ATOM 4484 N GLU 561 -14.122 106.626 -8.720 1.00 0.00 N ATOM 4485 CA GLU 561 -15.015 106.446 -9.883 1.00 0.00 C ATOM 4486 C GLU 561 -16.465 106.911 -9.543 1.00 0.00 C ATOM 4487 O GLU 561 -17.110 107.382 -10.489 1.00 0.00 O ATOM 4488 CB GLU 561 -14.971 104.990 -10.358 1.00 0.00 C ATOM 4489 CG GLU 561 -13.666 104.572 -10.976 1.00 0.00 C ATOM 4490 CD GLU 561 -13.644 103.103 -11.349 1.00 0.00 C ATOM 4491 OE1 GLU 561 -14.578 102.374 -10.952 1.00 0.00 O ATOM 4492 OE2 GLU 561 -12.692 102.679 -12.039 1.00 0.00 O ATOM 4493 N ASP 562 -17.112 106.412 -8.466 1.00 0.00 N ATOM 4494 CA ASP 562 -18.426 106.833 -7.976 1.00 0.00 C ATOM 4495 C ASP 562 -18.569 108.388 -8.058 1.00 0.00 C ATOM 4496 O ASP 562 -19.633 108.848 -8.492 1.00 0.00 O ATOM 4497 CB ASP 562 -18.520 106.333 -6.530 1.00 0.00 C ATOM 4498 CG ASP 562 -18.741 104.849 -6.426 1.00 0.00 C ATOM 4499 OD1 ASP 562 -19.026 104.219 -7.465 1.00 0.00 O ATOM 4500 OD2 ASP 562 -18.601 104.301 -5.312 1.00 0.00 O ATOM 4501 N LEU 563 -17.614 109.162 -7.486 1.00 0.00 N ATOM 4502 CA LEU 563 -17.547 110.627 -7.559 1.00 0.00 C ATOM 4503 C LEU 563 -17.384 111.185 -9.023 1.00 0.00 C ATOM 4504 O LEU 563 -17.488 112.418 -9.158 1.00 0.00 O ATOM 4505 CB LEU 563 -16.315 111.024 -6.733 1.00 0.00 C ATOM 4506 CG LEU 563 -16.403 110.808 -5.216 1.00 0.00 C ATOM 4507 CD1 LEU 563 -15.091 111.162 -4.534 1.00 0.00 C ATOM 4508 CD2 LEU 563 -17.549 111.598 -4.603 1.00 0.00 C ATOM 4509 N ASP 564 -17.309 110.358 -10.092 1.00 0.00 N ATOM 4510 CA ASP 564 -17.140 110.766 -11.494 1.00 0.00 C ATOM 4511 C ASP 564 -15.911 111.732 -11.701 1.00 0.00 C ATOM 4512 O ASP 564 -16.021 112.689 -12.489 1.00 0.00 O ATOM 4513 CB ASP 564 -18.454 111.430 -11.933 1.00 0.00 C ATOM 4514 CG ASP 564 -19.627 110.501 -11.930 1.00 0.00 C ATOM 4515 OD1 ASP 564 -19.422 109.282 -12.109 1.00 0.00 O ATOM 4516 OD2 ASP 564 -20.762 110.981 -11.727 1.00 0.00 O ATOM 4517 N TYR 565 -14.729 111.417 -11.162 1.00 0.00 N ATOM 4518 CA TYR 565 -13.508 112.168 -11.359 1.00 0.00 C ATOM 4519 C TYR 565 -12.728 111.420 -12.422 1.00 0.00 C ATOM 4520 O TYR 565 -12.302 110.270 -12.200 1.00 0.00 O ATOM 4521 CB TYR 565 -12.780 112.300 -10.014 1.00 0.00 C ATOM 4522 CG TYR 565 -13.431 113.217 -9.039 1.00 0.00 C ATOM 4523 CD1 TYR 565 -14.278 114.231 -9.465 1.00 0.00 C ATOM 4524 CD2 TYR 565 -13.212 113.068 -7.676 1.00 0.00 C ATOM 4525 CE1 TYR 565 -14.894 115.077 -8.562 1.00 0.00 C ATOM 4526 CE2 TYR 565 -13.817 113.904 -6.758 1.00 0.00 C ATOM 4527 CZ TYR 565 -14.665 114.915 -7.213 1.00 0.00 C ATOM 4528 OH TYR 565 -15.276 115.756 -6.311 1.00 0.00 H ATOM 4529 N ASP 566 -12.624 112.010 -13.598 1.00 0.00 N ATOM 4530 CA ASP 566 -11.969 111.411 -14.730 1.00 0.00 C ATOM 4531 C ASP 566 -10.580 110.904 -14.288 1.00 0.00 C ATOM 4532 O ASP 566 -9.815 111.683 -13.717 1.00 0.00 O ATOM 4533 CB ASP 566 -11.864 112.448 -15.852 1.00 0.00 C ATOM 4534 CG ASP 566 -13.197 112.777 -16.471 1.00 0.00 C ATOM 4535 OD1 ASP 566 -14.172 112.046 -16.201 1.00 0.00 O ATOM 4536 OD2 ASP 566 -13.274 113.774 -17.219 1.00 0.00 O ATOM 4537 N ILE 567 -10.280 109.647 -14.574 1.00 0.00 N ATOM 4538 CA ILE 567 -9.002 109.033 -14.173 1.00 0.00 C ATOM 4539 C ILE 567 -7.745 109.891 -14.630 1.00 0.00 C ATOM 4540 O ILE 567 -6.724 109.809 -13.957 1.00 0.00 O ATOM 4541 CB ILE 567 -8.950 107.610 -14.740 1.00 0.00 C ATOM 4542 CG1 ILE 567 -10.028 106.733 -14.155 1.00 0.00 C ATOM 4543 CG2 ILE 567 -7.537 107.016 -14.477 1.00 0.00 C ATOM 4544 CD1 ILE 567 -9.965 106.589 -12.651 1.00 0.00 C ATOM 4545 N HIS 568 -7.657 110.397 -15.875 1.00 0.00 N ATOM 4546 CA HIS 568 -6.560 111.282 -16.298 1.00 0.00 C ATOM 4547 C HIS 568 -6.256 112.464 -15.290 1.00 0.00 C ATOM 4548 O HIS 568 -5.316 113.193 -15.596 1.00 0.00 O ATOM 4549 CB HIS 568 -7.009 111.901 -17.645 1.00 0.00 C ATOM 4550 CG HIS 568 -5.953 112.814 -18.257 1.00 0.00 C ATOM 4551 ND1 HIS 568 -4.781 112.348 -18.815 1.00 0.00 N ATOM 4552 CD2 HIS 568 -5.818 114.251 -18.438 1.00 0.00 C ATOM 4553 CE1 HIS 568 -4.063 113.395 -19.261 1.00 0.00 C ATOM 4554 NE2 HIS 568 -4.679 114.539 -19.038 1.00 0.00 N ATOM 4555 N ALA 569 -7.291 113.013 -14.676 1.00 0.00 N ATOM 4556 CA ALA 569 -7.178 114.040 -13.642 1.00 0.00 C ATOM 4557 C ALA 569 -7.334 113.466 -12.178 1.00 0.00 C ATOM 4558 O ALA 569 -7.077 114.243 -11.259 1.00 0.00 O ATOM 4559 CB ALA 569 -8.275 115.065 -13.918 1.00 0.00 C ATOM 4560 N ILE 570 -7.553 112.147 -11.953 1.00 0.00 N ATOM 4561 CA ILE 570 -7.704 111.554 -10.652 1.00 0.00 C ATOM 4562 C ILE 570 -6.401 111.757 -9.802 1.00 0.00 C ATOM 4563 O ILE 570 -6.569 111.859 -8.602 1.00 0.00 O ATOM 4564 CB ILE 570 -8.202 110.109 -10.785 1.00 0.00 C ATOM 4565 CG1 ILE 570 -8.700 109.561 -9.473 1.00 0.00 C ATOM 4566 CG2 ILE 570 -7.062 109.212 -11.337 1.00 0.00 C ATOM 4567 CD1 ILE 570 -9.980 110.288 -8.962 1.00 0.00 C ATOM 4568 N MET 571 -5.164 111.592 -10.345 1.00 0.00 N ATOM 4569 CA MET 571 -4.000 111.871 -9.492 1.00 0.00 C ATOM 4570 C MET 571 -4.060 113.269 -8.818 1.00 0.00 C ATOM 4571 O MET 571 -3.777 113.304 -7.633 1.00 0.00 O ATOM 4572 CB MET 571 -2.657 111.707 -10.206 1.00 0.00 C ATOM 4573 CG MET 571 -2.444 110.297 -10.764 1.00 0.00 C ATOM 4574 SD MET 571 -2.335 109.069 -9.450 1.00 0.00 S ATOM 4575 CE MET 571 -4.002 108.417 -9.455 1.00 0.00 C ATOM 4576 N ASP 572 -4.122 114.376 -9.576 1.00 0.00 N ATOM 4577 CA ASP 572 -4.282 115.717 -8.979 1.00 0.00 C ATOM 4578 C ASP 572 -5.478 115.733 -7.945 1.00 0.00 C ATOM 4579 O ASP 572 -5.253 116.228 -6.838 1.00 0.00 O ATOM 4580 CB ASP 572 -4.489 116.763 -10.076 1.00 0.00 C ATOM 4581 CG ASP 572 -3.239 117.024 -10.866 1.00 0.00 C ATOM 4582 OD1 ASP 572 -2.152 116.598 -10.422 1.00 0.00 O ATOM 4583 OD2 ASP 572 -3.339 117.658 -11.937 1.00 0.00 O ATOM 4584 N ILE 573 -6.735 115.390 -8.335 1.00 0.00 N ATOM 4585 CA ILE 573 -7.898 115.298 -7.442 1.00 0.00 C ATOM 4586 C ILE 573 -7.624 114.463 -6.150 1.00 0.00 C ATOM 4587 O ILE 573 -8.061 114.939 -5.115 1.00 0.00 O ATOM 4588 CB ILE 573 -9.061 114.682 -8.239 1.00 0.00 C ATOM 4589 CG1 ILE 573 -9.548 115.620 -9.323 1.00 0.00 C ATOM 4590 CG2 ILE 573 -10.212 114.332 -7.251 1.00 0.00 C ATOM 4591 CD1 ILE 573 -10.521 114.986 -10.294 1.00 0.00 C ATOM 4592 N LEU 574 -6.844 113.373 -6.176 1.00 0.00 N ATOM 4593 CA LEU 574 -6.527 112.571 -4.980 1.00 0.00 C ATOM 4594 C LEU 574 -6.101 113.425 -3.765 1.00 0.00 C ATOM 4595 O LEU 574 -6.818 113.428 -2.785 1.00 0.00 O ATOM 4596 CB LEU 574 -5.478 111.482 -5.235 1.00 0.00 C ATOM 4597 CG LEU 574 -5.900 110.367 -6.185 1.00 0.00 C ATOM 4598 CD1 LEU 574 -4.701 109.510 -6.558 1.00 0.00 C ATOM 4599 CD2 LEU 574 -6.980 109.515 -5.536 1.00 0.00 C ATOM 4600 N ASN 575 -5.000 114.233 -3.815 1.00 0.00 N ATOM 4601 CA ASN 575 -4.567 115.112 -2.699 1.00 0.00 C ATOM 4602 C ASN 575 -5.783 115.972 -2.209 1.00 0.00 C ATOM 4603 O ASN 575 -6.238 115.705 -1.097 1.00 0.00 O ATOM 4604 CB ASN 575 -3.340 115.920 -3.131 1.00 0.00 C ATOM 4605 CG ASN 575 -2.810 116.746 -1.964 1.00 0.00 C ATOM 4606 OD1 ASN 575 -2.329 116.186 -0.978 1.00 0.00 O ATOM 4607 ND2 ASN 575 -2.864 118.068 -2.085 1.00 0.00 N ATOM 4608 N GLU 576 -6.453 116.791 -3.051 1.00 0.00 N ATOM 4609 CA GLU 576 -7.602 117.629 -2.692 1.00 0.00 C ATOM 4610 C GLU 576 -8.845 116.848 -2.118 1.00 0.00 C ATOM 4611 O GLU 576 -9.192 117.152 -0.970 1.00 0.00 O ATOM 4612 CB GLU 576 -8.005 118.443 -3.941 1.00 0.00 C ATOM 4613 CG GLU 576 -9.158 119.423 -3.675 1.00 0.00 C ATOM 4614 CD GLU 576 -9.527 120.220 -4.909 1.00 0.00 C ATOM 4615 OE1 GLU 576 -8.911 119.990 -5.971 1.00 0.00 O ATOM 4616 OE2 GLU 576 -10.430 121.076 -4.815 1.00 0.00 O ATOM 4617 N ARG 577 -9.360 115.775 -2.755 1.00 0.00 N ATOM 4618 CA ARG 577 -10.584 115.069 -2.323 1.00 0.00 C ATOM 4619 C ARG 577 -10.197 114.123 -1.107 1.00 0.00 C ATOM 4620 O ARG 577 -10.899 114.204 -0.096 1.00 0.00 O ATOM 4621 CB ARG 577 -11.250 114.383 -3.530 1.00 0.00 C ATOM 4622 CG ARG 577 -12.482 113.585 -3.066 1.00 0.00 C ATOM 4623 CD ARG 577 -13.570 114.528 -2.582 1.00 0.00 C ATOM 4624 NE ARG 577 -14.798 113.816 -2.234 1.00 0.00 N ATOM 4625 CZ ARG 577 -15.813 114.355 -1.569 1.00 0.00 C ATOM 4626 NH1 ARG 577 -16.890 113.629 -1.297 1.00 0.00 H ATOM 4627 NH2 ARG 577 -15.751 115.620 -1.175 1.00 0.00 H ATOM 4628 N ILE 578 -9.199 113.192 -1.214 1.00 0.00 N ATOM 4629 CA ILE 578 -8.694 112.329 -0.134 1.00 0.00 C ATOM 4630 C ILE 578 -8.403 113.128 1.182 1.00 0.00 C ATOM 4631 O ILE 578 -9.166 112.923 2.107 1.00 0.00 O ATOM 4632 CB ILE 578 -7.407 111.603 -0.576 1.00 0.00 C ATOM 4633 CG1 ILE 578 -7.728 110.597 -1.672 1.00 0.00 C ATOM 4634 CG2 ILE 578 -6.748 110.940 0.632 1.00 0.00 C ATOM 4635 CD1 ILE 578 -6.500 110.022 -2.344 1.00 0.00 C ATOM 4636 N SER 579 -7.527 114.156 1.190 1.00 0.00 N ATOM 4637 CA SER 579 -7.117 114.940 2.359 1.00 0.00 C ATOM 4638 C SER 579 -8.298 115.432 3.248 1.00 0.00 C ATOM 4639 O SER 579 -8.169 115.230 4.457 1.00 0.00 O ATOM 4640 CB SER 579 -6.245 116.123 1.939 1.00 0.00 C ATOM 4641 OG SER 579 -6.722 117.129 1.118 1.00 0.00 O ATOM 4642 N ASN 580 -9.312 116.162 2.735 1.00 0.00 N ATOM 4643 CA ASN 580 -10.369 116.635 3.658 1.00 0.00 C ATOM 4644 C ASN 580 -11.033 115.462 4.474 1.00 0.00 C ATOM 4645 O ASN 580 -11.031 115.567 5.710 1.00 0.00 O ATOM 4646 CB ASN 580 -11.407 117.416 2.847 1.00 0.00 C ATOM 4647 CG ASN 580 -10.918 118.759 2.397 1.00 0.00 C ATOM 4648 OD1 ASN 580 -9.935 119.282 2.922 1.00 0.00 O ATOM 4649 ND2 ASN 580 -11.595 119.330 1.408 1.00 0.00 N ATOM 4650 N SER 581 -11.655 114.450 3.851 1.00 0.00 N ATOM 4651 CA SER 581 -12.256 113.307 4.566 1.00 0.00 C ATOM 4652 C SER 581 -11.195 112.229 5.037 1.00 0.00 C ATOM 4653 O SER 581 -11.619 111.347 5.799 1.00 0.00 O ATOM 4654 CB SER 581 -13.267 112.637 3.614 1.00 0.00 C ATOM 4655 OG SER 581 -12.744 111.874 2.522 1.00 0.00 O ATOM 4656 N LYS 582 -9.871 112.475 4.885 1.00 0.00 N ATOM 4657 CA LYS 582 -8.790 111.584 5.192 1.00 0.00 C ATOM 4658 C LYS 582 -8.761 110.278 4.360 1.00 0.00 C ATOM 4659 O LYS 582 -7.650 109.793 4.182 1.00 0.00 O ATOM 4660 CB LYS 582 -8.798 111.245 6.695 1.00 0.00 C ATOM 4661 CG LYS 582 -8.718 112.460 7.612 1.00 0.00 C ATOM 4662 CD LYS 582 -8.696 112.051 9.075 1.00 0.00 C ATOM 4663 CE LYS 582 -8.614 113.266 9.986 1.00 0.00 C ATOM 4664 NZ LYS 582 -8.621 112.882 11.425 1.00 0.00 N ATOM 4665 N LEU 583 -9.869 109.826 3.698 1.00 0.00 N ATOM 4666 CA LEU 583 -9.878 108.599 2.924 1.00 0.00 C ATOM 4667 C LEU 583 -8.888 107.564 3.523 1.00 0.00 C ATOM 4668 O LEU 583 -9.309 106.857 4.443 1.00 0.00 O ATOM 4669 CB LEU 583 -9.806 108.796 1.430 1.00 0.00 C ATOM 4670 CG LEU 583 -10.880 109.552 0.753 1.00 0.00 C ATOM 4671 CD1 LEU 583 -10.510 109.852 -0.691 1.00 0.00 C ATOM 4672 CD2 LEU 583 -12.175 108.753 0.812 1.00 0.00 C ATOM 4673 N VAL 584 -7.864 107.225 2.793 1.00 0.00 N ATOM 4674 CA VAL 584 -6.806 106.336 3.166 1.00 0.00 C ATOM 4675 C VAL 584 -5.651 107.083 3.912 1.00 0.00 C ATOM 4676 O VAL 584 -5.403 108.270 3.677 1.00 0.00 O ATOM 4677 CB VAL 584 -6.317 105.744 1.853 1.00 0.00 C ATOM 4678 CG1 VAL 584 -7.353 104.898 1.165 1.00 0.00 C ATOM 4679 CG2 VAL 584 -5.693 106.754 0.925 1.00 0.00 C ATOM 4680 N ASN 585 -4.813 106.310 4.619 1.00 0.00 N ATOM 4681 CA ASN 585 -3.632 106.806 5.326 1.00 0.00 C ATOM 4682 C ASN 585 -2.488 107.254 4.330 1.00 0.00 C ATOM 4683 O ASN 585 -2.630 107.126 3.089 1.00 0.00 O ATOM 4684 CB ASN 585 -3.159 105.656 6.220 1.00 0.00 C ATOM 4685 CG ASN 585 -4.089 105.390 7.385 1.00 0.00 C ATOM 4686 OD1 ASN 585 -4.910 106.235 7.741 1.00 0.00 O ATOM 4687 ND2 ASN 585 -3.987 104.198 7.964 1.00 0.00 N ATOM 4688 N ASP 586 -1.456 107.958 4.858 1.00 0.00 N ATOM 4689 CA ASP 586 -0.245 108.401 4.110 1.00 0.00 C ATOM 4690 C ASP 586 0.294 107.276 3.156 1.00 0.00 C ATOM 4691 O ASP 586 0.548 107.626 1.985 1.00 0.00 O ATOM 4692 CB ASP 586 0.822 108.858 5.107 1.00 0.00 C ATOM 4693 CG ASP 586 0.475 110.146 5.794 1.00 0.00 C ATOM 4694 OD1 ASP 586 -0.448 110.844 5.321 1.00 0.00 O ATOM 4695 OD2 ASP 586 1.119 110.466 6.815 1.00 0.00 O ATOM 4696 N LYS 587 0.642 106.063 3.641 1.00 0.00 N ATOM 4697 CA LYS 587 1.064 104.951 2.842 1.00 0.00 C ATOM 4698 C LYS 587 0.079 104.623 1.695 1.00 0.00 C ATOM 4699 O LYS 587 0.577 104.455 0.576 1.00 0.00 O ATOM 4700 CB LYS 587 1.314 103.714 3.744 1.00 0.00 C ATOM 4701 CG LYS 587 2.488 103.842 4.669 1.00 0.00 C ATOM 4702 CD LYS 587 2.641 102.601 5.531 1.00 0.00 C ATOM 4703 CE LYS 587 3.823 102.730 6.480 1.00 0.00 C ATOM 4704 NZ LYS 587 3.960 101.537 7.362 1.00 0.00 N ATOM 4705 N GLN 588 -1.213 104.294 1.955 1.00 0.00 N ATOM 4706 CA GLN 588 -2.213 104.078 0.902 1.00 0.00 C ATOM 4707 C GLN 588 -2.104 105.168 -0.212 1.00 0.00 C ATOM 4708 O GLN 588 -1.485 104.844 -1.192 1.00 0.00 O ATOM 4709 CB GLN 588 -3.590 103.959 1.509 1.00 0.00 C ATOM 4710 CG GLN 588 -3.840 102.748 2.339 1.00 0.00 C ATOM 4711 CD GLN 588 -5.201 102.755 3.006 1.00 0.00 C ATOM 4712 OE1 GLN 588 -5.432 103.500 3.957 1.00 0.00 O ATOM 4713 NE2 GLN 588 -6.107 101.923 2.507 1.00 0.00 N ATOM 4714 N LYS 589 -2.206 106.472 0.121 1.00 0.00 N ATOM 4715 CA LYS 589 -2.056 107.600 -0.860 1.00 0.00 C ATOM 4716 C LYS 589 -0.809 107.482 -1.751 1.00 0.00 C ATOM 4717 O LYS 589 -0.980 107.751 -2.950 1.00 0.00 O ATOM 4718 CB LYS 589 -2.086 108.885 -0.048 1.00 0.00 C ATOM 4719 CG LYS 589 -3.420 109.293 0.512 1.00 0.00 C ATOM 4720 CD LYS 589 -3.306 110.489 1.443 1.00 0.00 C ATOM 4721 CE LYS 589 -2.907 111.743 0.682 1.00 0.00 C ATOM 4722 NZ LYS 589 -2.871 112.941 1.567 1.00 0.00 N ATOM 4723 N LYS 590 0.442 107.431 -1.212 1.00 0.00 N ATOM 4724 CA LYS 590 1.679 107.372 -1.941 1.00 0.00 C ATOM 4725 C LYS 590 1.542 106.171 -2.949 1.00 0.00 C ATOM 4726 O LYS 590 1.832 106.402 -4.125 1.00 0.00 O ATOM 4727 CB LYS 590 2.861 107.221 -0.977 1.00 0.00 C ATOM 4728 CG LYS 590 4.205 107.158 -1.705 1.00 0.00 C ATOM 4729 CD LYS 590 5.343 107.038 -0.704 1.00 0.00 C ATOM 4730 CE LYS 590 6.689 106.958 -1.405 1.00 0.00 C ATOM 4731 NZ LYS 590 7.814 106.841 -0.437 1.00 0.00 N ATOM 4732 N HIS 591 1.234 104.928 -2.492 1.00 0.00 N ATOM 4733 CA HIS 591 0.983 103.757 -3.322 1.00 0.00 C ATOM 4734 C HIS 591 -0.208 104.013 -4.291 1.00 0.00 C ATOM 4735 O HIS 591 0.014 103.798 -5.454 1.00 0.00 O ATOM 4736 CB HIS 591 0.720 102.544 -2.431 1.00 0.00 C ATOM 4737 CG HIS 591 1.916 102.057 -1.701 1.00 0.00 C ATOM 4738 ND1 HIS 591 2.977 101.438 -2.328 1.00 0.00 N ATOM 4739 CD2 HIS 591 2.349 102.055 -0.310 1.00 0.00 C ATOM 4740 CE1 HIS 591 3.904 101.119 -1.405 1.00 0.00 C ATOM 4741 NE2 HIS 591 3.534 101.486 -0.193 1.00 0.00 N ATOM 4742 N ILE 592 -1.398 104.428 -3.846 1.00 0.00 N ATOM 4743 CA ILE 592 -2.560 104.765 -4.686 1.00 0.00 C ATOM 4744 C ILE 592 -2.142 105.556 -5.965 1.00 0.00 C ATOM 4745 O ILE 592 -2.953 105.582 -6.860 1.00 0.00 O ATOM 4746 CB ILE 592 -3.660 105.476 -3.882 1.00 0.00 C ATOM 4747 CG1 ILE 592 -4.241 104.577 -2.826 1.00 0.00 C ATOM 4748 CG2 ILE 592 -4.711 106.047 -4.827 1.00 0.00 C ATOM 4749 CD1 ILE 592 -5.105 105.300 -1.815 1.00 0.00 C ATOM 4750 N LEU 593 -1.247 106.556 -5.893 1.00 0.00 N ATOM 4751 CA LEU 593 -0.800 107.201 -7.133 1.00 0.00 C ATOM 4752 C LEU 593 -0.361 106.124 -8.202 1.00 0.00 C ATOM 4753 O LEU 593 -0.921 106.107 -9.300 1.00 0.00 O ATOM 4754 CB LEU 593 0.402 108.071 -6.720 1.00 0.00 C ATOM 4755 CG LEU 593 0.091 109.344 -5.954 1.00 0.00 C ATOM 4756 CD1 LEU 593 1.370 110.034 -5.509 1.00 0.00 C ATOM 4757 CD2 LEU 593 -0.777 110.301 -6.757 1.00 0.00 C ATOM 4758 N GLY 594 0.645 105.260 -7.894 1.00 0.00 N ATOM 4759 CA GLY 594 1.024 104.165 -8.826 1.00 0.00 C ATOM 4760 C GLY 594 0.001 103.005 -8.868 1.00 0.00 C ATOM 4761 O GLY 594 -0.360 102.602 -9.979 1.00 0.00 O ATOM 4762 N GLU 595 -0.338 102.390 -7.719 1.00 0.00 N ATOM 4763 CA GLU 595 -1.354 101.365 -7.605 1.00 0.00 C ATOM 4764 C GLU 595 -2.749 101.787 -8.164 1.00 0.00 C ATOM 4765 O GLU 595 -3.537 100.857 -8.395 1.00 0.00 O ATOM 4766 CB GLU 595 -1.497 100.957 -6.133 1.00 0.00 C ATOM 4767 CG GLU 595 -0.280 100.261 -5.558 1.00 0.00 C ATOM 4768 CD GLU 595 -0.455 99.879 -4.101 1.00 0.00 C ATOM 4769 OE1 GLU 595 -1.515 100.203 -3.525 1.00 0.00 O ATOM 4770 OE2 GLU 595 0.465 99.254 -3.535 1.00 0.00 O ATOM 4771 N LEU 596 -3.178 103.074 -8.105 1.00 0.00 N ATOM 4772 CA LEU 596 -4.455 103.392 -8.700 1.00 0.00 C ATOM 4773 C LEU 596 -4.480 102.874 -10.186 1.00 0.00 C ATOM 4774 O LEU 596 -5.182 101.920 -10.391 1.00 0.00 O ATOM 4775 CB LEU 596 -4.904 104.830 -8.490 1.00 0.00 C ATOM 4776 CG LEU 596 -6.239 105.221 -9.070 1.00 0.00 C ATOM 4777 CD1 LEU 596 -7.341 104.450 -8.360 1.00 0.00 C ATOM 4778 CD2 LEU 596 -6.458 106.718 -8.916 1.00 0.00 C ATOM 4779 N TYR 597 -3.443 103.095 -11.033 1.00 0.00 N ATOM 4780 CA TYR 597 -3.340 102.575 -12.411 1.00 0.00 C ATOM 4781 C TYR 597 -3.578 101.036 -12.505 1.00 0.00 C ATOM 4782 O TYR 597 -4.498 100.646 -13.226 1.00 0.00 O ATOM 4783 CB TYR 597 -1.947 102.937 -12.971 1.00 0.00 C ATOM 4784 CG TYR 597 -1.721 102.436 -14.384 1.00 0.00 C ATOM 4785 CD1 TYR 597 -2.792 102.162 -15.228 1.00 0.00 C ATOM 4786 CD2 TYR 597 -0.434 102.245 -14.869 1.00 0.00 C ATOM 4787 CE1 TYR 597 -2.589 101.709 -16.518 1.00 0.00 C ATOM 4788 CE2 TYR 597 -0.212 101.793 -16.156 1.00 0.00 C ATOM 4789 CZ TYR 597 -1.305 101.525 -16.981 1.00 0.00 C ATOM 4790 OH TYR 597 -1.101 101.077 -18.266 1.00 0.00 H ATOM 4791 N LEU 598 -2.835 100.201 -11.749 1.00 0.00 N ATOM 4792 CA LEU 598 -3.055 98.761 -11.698 1.00 0.00 C ATOM 4793 C LEU 598 -4.536 98.481 -11.226 1.00 0.00 C ATOM 4794 O LEU 598 -5.218 97.747 -11.940 1.00 0.00 O ATOM 4795 CB LEU 598 -2.022 98.111 -10.791 1.00 0.00 C ATOM 4796 CG LEU 598 -0.597 98.101 -11.275 1.00 0.00 C ATOM 4797 CD1 LEU 598 0.336 97.574 -10.198 1.00 0.00 C ATOM 4798 CD2 LEU 598 -0.459 97.277 -12.546 1.00 0.00 C ATOM 4799 N PHE 599 -4.980 98.919 -10.028 1.00 0.00 N ATOM 4800 CA PHE 599 -6.345 98.766 -9.498 1.00 0.00 C ATOM 4801 C PHE 599 -7.420 99.252 -10.532 1.00 0.00 C ATOM 4802 O PHE 599 -8.293 98.437 -10.824 1.00 0.00 O ATOM 4803 CB PHE 599 -6.460 99.562 -8.182 1.00 0.00 C ATOM 4804 CG PHE 599 -5.760 98.919 -7.033 1.00 0.00 C ATOM 4805 CD1 PHE 599 -5.369 97.591 -7.087 1.00 0.00 C ATOM 4806 CD2 PHE 599 -5.479 99.644 -5.888 1.00 0.00 C ATOM 4807 CE1 PHE 599 -4.713 97.005 -6.021 1.00 0.00 C ATOM 4808 CE2 PHE 599 -4.824 99.058 -4.823 1.00 0.00 C ATOM 4809 CZ PHE 599 -4.441 97.743 -4.885 1.00 0.00 C ATOM 4810 N LEU 600 -7.347 100.489 -11.083 1.00 0.00 N ATOM 4811 CA LEU 600 -8.251 101.057 -12.099 1.00 0.00 C ATOM 4812 C LEU 600 -8.685 100.047 -13.193 1.00 0.00 C ATOM 4813 O LEU 600 -9.902 99.828 -13.293 1.00 0.00 O ATOM 4814 CB LEU 600 -7.398 102.149 -12.828 1.00 0.00 C ATOM 4815 CG LEU 600 -7.102 103.418 -11.979 1.00 0.00 C ATOM 4816 CD1 LEU 600 -6.175 104.358 -12.734 1.00 0.00 C ATOM 4817 CD2 LEU 600 -8.377 104.144 -11.576 1.00 0.00 C ATOM 4818 N ASN 601 -7.751 99.219 -13.722 1.00 0.00 N ATOM 4819 CA ASN 601 -8.015 98.301 -14.827 1.00 0.00 C ATOM 4820 C ASN 601 -8.677 99.106 -16.007 1.00 0.00 C ATOM 4821 O ASN 601 -9.319 98.481 -16.855 1.00 0.00 O ATOM 4822 CB ASN 601 -8.867 97.124 -14.342 1.00 0.00 C ATOM 4823 CG ASN 601 -8.766 95.944 -15.290 1.00 0.00 C ATOM 4824 OD1 ASN 601 -7.703 95.671 -15.849 1.00 0.00 O ATOM 4825 ND2 ASN 601 -9.869 95.222 -15.454 1.00 0.00 N ATOM 4826 N ASP 602 -8.279 100.388 -16.204 1.00 0.00 N ATOM 4827 CA ASP 602 -8.741 101.274 -17.217 1.00 0.00 C ATOM 4828 C ASP 602 -7.849 101.255 -18.519 1.00 0.00 C ATOM 4829 O ASP 602 -8.087 102.141 -19.370 1.00 0.00 O ATOM 4830 CB ASP 602 -8.728 102.645 -16.568 1.00 0.00 C ATOM 4831 CG ASP 602 -9.807 102.870 -15.563 1.00 0.00 C ATOM 4832 OD1 ASP 602 -10.811 102.128 -15.603 1.00 0.00 O ATOM 4833 OD2 ASP 602 -9.640 103.750 -14.694 1.00 0.00 O ATOM 4834 N ASN 603 -7.042 100.240 -18.791 1.00 0.00 N ATOM 4835 CA ASN 603 -6.195 100.237 -19.989 1.00 0.00 C ATOM 4836 C ASN 603 -5.328 101.539 -20.182 1.00 0.00 C ATOM 4837 O ASN 603 -5.262 102.030 -21.325 1.00 0.00 O ATOM 4838 CB ASN 603 -7.075 99.881 -21.176 1.00 0.00 C ATOM 4839 CG ASN 603 -6.241 99.426 -22.386 1.00 0.00 C ATOM 4840 OD1 ASN 603 -5.199 98.792 -22.214 1.00 0.00 O ATOM 4841 ND2 ASN 603 -6.716 99.715 -23.591 1.00 0.00 N ATOM 4842 N GLY 604 -4.550 102.006 -19.190 1.00 0.00 N ATOM 4843 CA GLY 604 -3.727 103.213 -19.355 1.00 0.00 C ATOM 4844 C GLY 604 -4.388 104.536 -18.857 1.00 0.00 C ATOM 4845 O GLY 604 -3.857 105.570 -19.244 1.00 0.00 O ATOM 4846 N TYR 605 -5.663 104.569 -18.426 1.00 0.00 N ATOM 4847 CA TYR 605 -6.259 105.762 -17.880 1.00 0.00 C ATOM 4848 C TYR 605 -5.329 106.432 -16.839 1.00 0.00 C ATOM 4849 O TYR 605 -5.120 107.646 -17.007 1.00 0.00 O ATOM 4850 CB TYR 605 -7.680 105.579 -17.367 1.00 0.00 C ATOM 4851 CG TYR 605 -8.692 105.299 -18.418 1.00 0.00 C ATOM 4852 CD1 TYR 605 -8.365 105.385 -19.765 1.00 0.00 C ATOM 4853 CD2 TYR 605 -9.999 104.973 -18.074 1.00 0.00 C ATOM 4854 CE1 TYR 605 -9.310 105.156 -20.747 1.00 0.00 C ATOM 4855 CE2 TYR 605 -10.956 104.740 -19.043 1.00 0.00 C ATOM 4856 CZ TYR 605 -10.601 104.835 -20.387 1.00 0.00 C ATOM 4857 OH TYR 605 -11.542 104.606 -21.364 1.00 0.00 H ATOM 4858 N LEU 606 -4.750 105.720 -15.840 1.00 0.00 N ATOM 4859 CA LEU 606 -3.884 106.431 -14.960 1.00 0.00 C ATOM 4860 C LEU 606 -2.434 106.618 -15.586 1.00 0.00 C ATOM 4861 O LEU 606 -1.706 107.440 -15.047 1.00 0.00 O ATOM 4862 CB LEU 606 -3.932 105.971 -13.518 1.00 0.00 C ATOM 4863 CG LEU 606 -3.052 106.721 -12.538 1.00 0.00 C ATOM 4864 CD1 LEU 606 -3.555 108.153 -12.423 1.00 0.00 C ATOM 4865 CD2 LEU 606 -3.089 106.036 -11.180 1.00 0.00 C ATOM 4866 N LYS 607 -1.907 105.705 -16.443 1.00 0.00 N ATOM 4867 CA LYS 607 -0.613 105.898 -17.122 1.00 0.00 C ATOM 4868 C LYS 607 -0.640 107.236 -17.964 1.00 0.00 C ATOM 4869 O LYS 607 0.299 108.017 -17.810 1.00 0.00 O ATOM 4870 CB LYS 607 -0.284 104.657 -17.969 1.00 0.00 C ATOM 4871 CG LYS 607 1.080 104.761 -18.647 1.00 0.00 C ATOM 4872 CD LYS 607 1.396 103.476 -19.393 1.00 0.00 C ATOM 4873 CE LYS 607 2.753 103.552 -20.077 1.00 0.00 C ATOM 4874 NZ LYS 607 3.073 102.300 -20.816 1.00 0.00 N ATOM 4875 N SER 608 -1.570 107.425 -18.932 1.00 0.00 N ATOM 4876 CA SER 608 -1.767 108.634 -19.725 1.00 0.00 C ATOM 4877 C SER 608 -1.679 109.948 -18.879 1.00 0.00 C ATOM 4878 O SER 608 -1.222 110.937 -19.462 1.00 0.00 O ATOM 4879 CB SER 608 -3.094 108.502 -20.452 1.00 0.00 C ATOM 4880 OG SER 608 -4.309 108.450 -19.797 1.00 0.00 O ATOM 4881 N ILE 609 -2.327 110.073 -17.687 1.00 0.00 N ATOM 4882 CA ILE 609 -2.167 111.324 -16.883 1.00 0.00 C ATOM 4883 C ILE 609 -0.707 111.893 -16.839 1.00 0.00 C ATOM 4884 O ILE 609 -0.565 113.069 -17.198 1.00 0.00 O ATOM 4885 CB ILE 609 -2.680 111.133 -15.440 1.00 0.00 C ATOM 4886 CG1 ILE 609 -2.891 112.469 -14.744 1.00 0.00 C ATOM 4887 CG2 ILE 609 -1.728 110.226 -14.668 1.00 0.00 C ATOM 4888 CD1 ILE 609 -3.644 112.366 -13.435 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 459 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 53.90 76.4 110 100.0 110 ARMSMC SECONDARY STRUCTURE . . 16.29 94.3 70 100.0 70 ARMSMC SURFACE . . . . . . . . 59.23 72.2 90 100.0 90 ARMSMC BURIED . . . . . . . . 14.03 95.0 20 100.0 20 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.89 50.9 53 100.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 71.56 50.0 52 100.0 52 ARMSSC1 SECONDARY STRUCTURE . . 63.85 60.6 33 100.0 33 ARMSSC1 SURFACE . . . . . . . . 76.72 44.2 43 100.0 43 ARMSSC1 BURIED . . . . . . . . 36.36 80.0 10 100.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.14 48.9 47 100.0 47 ARMSSC2 RELIABLE SIDE CHAINS . 76.15 43.3 30 100.0 30 ARMSSC2 SECONDARY STRUCTURE . . 80.46 48.4 31 100.0 31 ARMSSC2 SURFACE . . . . . . . . 72.96 47.4 38 100.0 38 ARMSSC2 BURIED . . . . . . . . 78.92 55.6 9 100.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.34 33.3 12 100.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 93.55 30.0 10 100.0 10 ARMSSC3 SECONDARY STRUCTURE . . 82.78 44.4 9 100.0 9 ARMSSC3 SURFACE . . . . . . . . 73.22 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 137.71 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.07 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 84.07 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 58.52 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 92.06 40.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 5.35 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.21 (Number of atoms: 56) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.21 56 100.0 56 CRMSCA CRN = ALL/NP . . . . . 0.1644 CRMSCA SECONDARY STRUCTURE . . 6.90 35 100.0 35 CRMSCA SURFACE . . . . . . . . 9.57 46 100.0 46 CRMSCA BURIED . . . . . . . . 7.31 10 100.0 10 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.30 278 100.0 278 CRMSMC SECONDARY STRUCTURE . . 6.90 174 100.0 174 CRMSMC SURFACE . . . . . . . . 9.67 228 100.0 228 CRMSMC BURIED . . . . . . . . 7.42 50 100.0 50 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.91 235 100.0 235 CRMSSC RELIABLE SIDE CHAINS . 9.94 191 100.0 191 CRMSSC SECONDARY STRUCTURE . . 8.23 151 100.0 151 CRMSSC SURFACE . . . . . . . . 10.44 196 100.0 196 CRMSSC BURIED . . . . . . . . 6.62 39 100.0 39 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.58 459 100.0 459 CRMSALL SECONDARY STRUCTURE . . 7.56 291 100.0 291 CRMSALL SURFACE . . . . . . . . 10.03 380 100.0 380 CRMSALL BURIED . . . . . . . . 7.05 79 100.0 79 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.897 1.000 0.500 56 100.0 56 ERRCA SECONDARY STRUCTURE . . 6.308 1.000 0.500 35 100.0 35 ERRCA SURFACE . . . . . . . . 8.213 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 6.443 1.000 0.500 10 100.0 10 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.948 1.000 0.500 278 100.0 278 ERRMC SECONDARY STRUCTURE . . 6.324 1.000 0.500 174 100.0 174 ERRMC SURFACE . . . . . . . . 8.245 1.000 0.500 228 100.0 228 ERRMC BURIED . . . . . . . . 6.595 1.000 0.500 50 100.0 50 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.632 1.000 0.500 235 100.0 235 ERRSC RELIABLE SIDE CHAINS . 8.672 1.000 0.500 191 100.0 191 ERRSC SECONDARY STRUCTURE . . 7.313 1.000 0.500 151 100.0 151 ERRSC SURFACE . . . . . . . . 9.153 1.000 0.500 196 100.0 196 ERRSC BURIED . . . . . . . . 6.014 1.000 0.500 39 100.0 39 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.261 1.000 0.500 459 100.0 459 ERRALL SECONDARY STRUCTURE . . 6.790 1.000 0.500 291 100.0 291 ERRALL SURFACE . . . . . . . . 8.664 1.000 0.500 380 100.0 380 ERRALL BURIED . . . . . . . . 6.324 1.000 0.500 79 100.0 79 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 17 45 56 56 DISTCA CA (P) 0.00 0.00 1.79 30.36 80.36 56 DISTCA CA (RMS) 0.00 0.00 2.52 3.93 6.28 DISTCA ALL (N) 0 4 18 121 341 459 459 DISTALL ALL (P) 0.00 0.87 3.92 26.36 74.29 459 DISTALL ALL (RMS) 0.00 1.72 2.43 3.88 6.29 DISTALL END of the results output