####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 21 ( 84), selected 21 , name T0547AL396_1-D3 # Molecule2: number of CA atoms 79 ( 644), selected 21 , name T0547-D3.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0547AL396_1-D3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 389 - 405 4.99 8.63 LCS_AVERAGE: 19.41 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 399 - 405 1.24 13.68 LCS_AVERAGE: 6.45 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 400 - 405 0.59 14.00 LCS_AVERAGE: 4.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 21 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 343 E 343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 8 9 10 15 LCS_GDT E 386 E 386 3 3 11 0 3 3 3 3 4 4 4 5 6 7 7 8 12 13 13 17 19 20 20 LCS_GDT S 387 S 387 3 3 11 0 3 3 3 3 4 4 5 5 7 9 10 15 15 15 16 18 19 20 20 LCS_GDT I 388 I 388 3 3 11 1 3 3 3 3 4 4 5 6 6 8 10 10 12 13 13 14 19 20 20 LCS_GDT L 389 L 389 3 3 17 0 3 3 3 3 4 4 6 8 8 10 11 15 15 16 17 18 19 20 20 LCS_GDT T 390 T 390 3 3 17 1 3 3 3 4 4 6 8 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT L 391 L 391 3 3 17 1 3 3 3 4 4 6 7 8 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT F 392 F 392 3 4 17 3 3 4 4 4 5 6 7 8 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT D 393 D 393 3 6 17 3 3 4 5 6 6 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT L 394 L 394 3 6 17 3 3 4 4 5 6 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT G 395 G 395 4 6 17 3 3 4 5 5 6 8 9 9 11 13 14 15 15 16 17 18 19 20 20 LCS_GDT Y 396 Y 396 4 6 17 3 3 4 5 5 6 6 7 8 10 10 11 13 14 16 17 18 19 20 20 LCS_GDT V 397 V 397 4 6 17 3 3 4 5 5 6 6 7 8 10 11 12 15 15 16 17 18 19 20 20 LCS_GDT D 398 D 398 4 6 17 0 3 4 5 6 6 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT L 399 L 399 3 7 17 3 3 5 6 7 7 7 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT Q 400 Q 400 6 7 17 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT D 401 D 401 6 7 17 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT R 402 R 402 6 7 17 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT S 403 S 403 6 7 17 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT N 404 N 404 6 7 17 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 LCS_GDT A 405 A 405 6 7 17 3 6 6 6 7 7 8 9 9 10 13 14 15 15 16 17 18 19 20 20 LCS_AVERAGE LCS_A: 10.27 ( 4.94 6.45 19.41 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 6 6 6 7 7 8 9 10 12 13 14 15 15 16 17 18 19 20 20 GDT PERCENT_AT 3.80 7.59 7.59 7.59 8.86 8.86 10.13 11.39 12.66 15.19 16.46 17.72 18.99 18.99 20.25 21.52 22.78 24.05 25.32 25.32 GDT RMS_LOCAL 0.04 0.59 0.59 0.59 1.24 1.24 2.60 2.84 3.13 3.68 3.84 4.06 4.39 4.39 4.72 4.99 5.38 5.70 6.06 6.06 GDT RMS_ALL_AT 16.83 14.00 14.00 14.00 13.68 13.68 9.09 9.05 8.89 8.80 8.96 8.93 8.86 8.86 8.64 8.63 8.61 8.51 8.41 8.41 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 343 E 343 26.680 5 0.360 0.360 26.791 0.000 0.000 LGA E 386 E 386 12.475 5 0.126 0.126 13.333 0.000 0.000 LGA S 387 S 387 12.084 2 0.536 0.536 14.059 0.000 0.000 LGA I 388 I 388 13.739 4 0.598 0.598 13.739 0.000 0.000 LGA L 389 L 389 9.124 4 0.547 0.547 10.755 1.667 0.833 LGA T 390 T 390 5.538 3 0.623 0.623 6.387 20.357 11.633 LGA L 391 L 391 8.090 4 0.618 0.618 8.399 7.381 3.690 LGA F 392 F 392 6.170 7 0.603 0.603 6.170 27.143 9.870 LGA D 393 D 393 2.522 4 0.090 0.090 3.737 61.667 30.833 LGA L 394 L 394 3.298 4 0.670 0.670 6.697 44.048 22.024 LGA G 395 G 395 6.307 0 0.609 0.609 7.306 17.143 17.143 LGA Y 396 Y 396 9.540 8 0.085 0.085 9.540 2.381 0.794 LGA V 397 V 397 8.080 3 0.651 0.651 8.080 14.286 8.163 LGA D 398 D 398 2.892 4 0.558 0.558 4.540 47.619 23.810 LGA L 399 L 399 3.761 4 0.598 0.598 3.761 53.810 26.905 LGA Q 400 Q 400 1.501 5 0.182 0.182 1.632 84.048 37.354 LGA D 401 D 401 1.984 4 0.084 0.084 2.687 71.310 35.655 LGA R 402 R 402 3.672 7 0.062 0.062 3.672 51.905 18.874 LGA S 403 S 403 1.922 2 0.101 0.101 2.139 75.119 50.079 LGA N 404 N 404 3.108 4 0.057 0.057 4.729 49.405 24.702 LGA A 405 A 405 5.629 1 0.261 0.261 5.629 29.048 23.238 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 21 84 84 100.00 168 84 50.00 79 SUMMARY(RMSD_GDC): 7.896 7.789 7.789 8.333 4.375 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 21 79 4.0 9 2.84 12.025 10.690 0.306 LGA_LOCAL RMSD: 2.844 Number of atoms: 9 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.051 Number of assigned atoms: 21 Std_ASGN_ATOMS RMSD: 7.896 Standard rmsd on all 21 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.741663 * X + 0.651471 * Y + -0.159755 * Z + -83.233185 Y_new = -0.449455 * X + 0.659448 * Y + 0.602592 * Z + 77.860077 Z_new = 0.497922 * X + -0.375118 * Y + 0.781896 * Z + -30.285292 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.544827 -0.521201 -0.447320 [DEG: -31.2163 -29.8626 -25.6296 ] ZXZ: -2.882442 0.673096 2.216449 [DEG: -165.1517 38.5655 126.9932 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0547AL396_1-D3 REMARK 2: T0547-D3.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0547AL396_1-D3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 21 79 4.0 9 2.84 10.690 7.90 REMARK ---------------------------------------------------------- MOLECULE T0547AL396_1-D3 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1tuf_A ATOM 1229 N GLU 343 -48.061 79.719 -19.769 1.00 0.00 N ATOM 1230 CA GLU 343 -48.461 78.544 -20.545 1.00 0.00 C ATOM 1231 C GLU 343 -48.381 77.201 -19.810 1.00 0.00 C ATOM 1232 O GLU 343 -48.957 76.206 -20.255 1.00 0.00 O ATOM 1233 N GLU 386 -47.684 77.165 -18.681 1.00 0.00 N ATOM 1234 CA GLU 386 -47.554 75.914 -17.945 1.00 0.00 C ATOM 1235 C GLU 386 -47.966 76.026 -16.477 1.00 0.00 C ATOM 1236 O GLU 386 -48.180 75.014 -15.811 1.00 0.00 O ATOM 1237 N SER 387 -48.088 77.251 -15.977 1.00 0.00 N ATOM 1238 CA SER 387 -48.450 77.451 -14.581 1.00 0.00 C ATOM 1239 C SER 387 -49.262 78.712 -14.341 1.00 0.00 C ATOM 1240 O SER 387 -49.145 79.691 -15.077 1.00 0.00 O ATOM 1241 N ILE 388 -50.098 78.679 -13.310 1.00 0.00 N ATOM 1242 CA ILE 388 -50.883 79.846 -12.946 1.00 0.00 C ATOM 1243 C ILE 388 -50.306 80.346 -11.628 1.00 0.00 C ATOM 1244 O ILE 388 -50.494 79.721 -10.594 1.00 0.00 O ATOM 1245 N LEU 389 -49.606 81.472 -11.674 1.00 0.00 N ATOM 1246 CA LEU 389 -48.971 82.029 -10.489 1.00 0.00 C ATOM 1247 C LEU 389 -49.787 83.015 -9.657 1.00 0.00 C ATOM 1248 O LEU 389 -50.417 83.941 -10.171 1.00 0.00 O ATOM 1249 N THR 390 -49.743 82.803 -8.350 1.00 0.00 N ATOM 1250 CA THR 390 -50.428 83.645 -7.391 1.00 0.00 C ATOM 1251 C THR 390 -49.328 84.335 -6.612 1.00 0.00 C ATOM 1252 O THR 390 -48.548 83.680 -5.918 1.00 0.00 O ATOM 1253 N LEU 391 -49.259 85.654 -6.735 1.00 0.00 N ATOM 1254 CA LEU 391 -48.223 86.426 -6.058 1.00 0.00 C ATOM 1255 C LEU 391 -48.751 87.029 -4.758 1.00 0.00 C ATOM 1256 O LEU 391 -49.806 87.662 -4.737 1.00 0.00 O ATOM 1257 N PHE 392 -48.016 86.829 -3.673 1.00 0.00 N ATOM 1258 CA PHE 392 -48.420 87.348 -2.370 1.00 0.00 C ATOM 1259 C PHE 392 -47.321 88.182 -1.714 1.00 0.00 C ATOM 1260 O PHE 392 -46.132 87.970 -1.958 1.00 0.00 O ATOM 1261 N ASP 393 -47.734 89.122 -0.870 1.00 0.00 N ATOM 1262 CA ASP 393 -46.806 89.997 -0.173 1.00 0.00 C ATOM 1263 C ASP 393 -45.961 89.278 0.879 1.00 0.00 C ATOM 1264 O ASP 393 -45.241 89.912 1.648 1.00 0.00 O ATOM 1265 N LEU 394 -46.058 87.957 0.929 1.00 0.00 N ATOM 1266 CA LEU 394 -45.261 87.193 1.873 1.00 0.00 C ATOM 1267 C LEU 394 -44.145 86.591 1.039 1.00 0.00 C ATOM 1268 O LEU 394 -44.365 86.189 -0.105 1.00 0.00 O ATOM 1269 N GLY 395 -42.947 86.535 1.600 1.00 0.00 N ATOM 1270 CA GLY 395 -41.842 85.980 0.850 1.00 0.00 C ATOM 1271 C GLY 395 -40.978 85.064 1.683 1.00 0.00 C ATOM 1272 O GLY 395 -41.254 84.825 2.855 1.00 0.00 O ATOM 1273 N TYR 396 -39.914 84.566 1.074 1.00 0.00 N ATOM 1274 CA TYR 396 -39.012 83.667 1.750 1.00 0.00 C ATOM 1275 C TYR 396 -38.276 84.336 2.904 1.00 0.00 C ATOM 1276 O TYR 396 -37.839 83.654 3.831 1.00 0.00 O ATOM 1277 N VAL 397 -38.121 85.657 2.863 1.00 0.00 N ATOM 1278 CA VAL 397 -37.415 86.330 3.955 1.00 0.00 C ATOM 1279 C VAL 397 -38.257 86.219 5.218 1.00 0.00 C ATOM 1280 O VAL 397 -37.725 86.128 6.322 1.00 0.00 O ATOM 1281 N ASP 398 -39.574 86.231 5.050 1.00 0.00 N ATOM 1282 CA ASP 398 -40.488 86.120 6.186 1.00 0.00 C ATOM 1283 C ASP 398 -40.515 84.696 6.734 1.00 0.00 C ATOM 1284 O ASP 398 -40.542 84.488 7.946 1.00 0.00 O ATOM 1285 N LEU 399 -40.512 83.720 5.831 1.00 0.00 N ATOM 1286 CA LEU 399 -40.565 82.307 6.207 1.00 0.00 C ATOM 1287 C LEU 399 -39.683 81.542 5.211 1.00 0.00 C ATOM 1288 O LEU 399 -40.064 81.319 4.067 1.00 0.00 O ATOM 1289 N GLN 400 -38.502 81.148 5.667 1.00 0.00 N ATOM 1290 CA GLN 400 -37.509 80.471 4.840 1.00 0.00 C ATOM 1291 C GLN 400 -37.654 78.986 4.536 1.00 0.00 C ATOM 1292 O GLN 400 -37.055 78.495 3.578 1.00 0.00 O ATOM 1293 N ASP 401 -38.438 78.269 5.325 1.00 0.00 N ATOM 1294 CA ASP 401 -38.575 76.825 5.138 1.00 0.00 C ATOM 1295 C ASP 401 -38.773 76.303 3.691 1.00 0.00 C ATOM 1296 O ASP 401 -37.982 75.483 3.215 1.00 0.00 O ATOM 1297 N ARG 402 -39.814 76.764 2.975 1.00 0.00 N ATOM 1298 CA ARG 402 -40.030 76.288 1.603 1.00 0.00 C ATOM 1299 C ARG 402 -38.821 76.446 0.677 1.00 0.00 C ATOM 1300 O ARG 402 -38.342 75.475 0.098 1.00 0.00 O ATOM 1301 N SER 403 -38.331 77.671 0.540 1.00 0.00 N ATOM 1302 CA SER 403 -37.194 77.958 -0.330 1.00 0.00 C ATOM 1303 C SER 403 -35.882 77.280 0.066 1.00 0.00 C ATOM 1304 O SER 403 -35.069 76.941 -0.796 1.00 0.00 O ATOM 1305 N ASN 404 -35.671 77.080 1.361 1.00 0.00 N ATOM 1306 CA ASN 404 -34.433 76.471 1.839 1.00 0.00 C ATOM 1307 C ASN 404 -34.351 74.950 1.744 1.00 0.00 C ATOM 1308 O ASN 404 -33.291 74.402 1.446 1.00 0.00 O ATOM 1309 N ALA 405 -35.462 74.270 2.006 1.00 0.00 N ATOM 1310 CA ALA 405 -35.477 72.809 1.997 1.00 0.00 C ATOM 1311 C ALA 405 -36.479 72.213 1.009 1.00 0.00 C ATOM 1312 O ALA 405 -36.529 70.997 0.837 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 84 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 92.56 44.7 38 24.4 156 ARMSMC SECONDARY STRUCTURE . . 89.12 46.2 26 25.0 104 ARMSMC SURFACE . . . . . . . . 94.93 44.8 29 27.9 104 ARMSMC BURIED . . . . . . . . 84.48 44.4 9 17.3 52 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 73 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 72 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 49 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 50 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 64 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 40 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 42 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 44 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 8 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.90 (Number of atoms: 21) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.90 21 26.6 79 CRMSCA CRN = ALL/NP . . . . . 0.3760 CRMSCA SECONDARY STRUCTURE . . 7.04 14 26.9 52 CRMSCA SURFACE . . . . . . . . 7.81 16 30.2 53 CRMSCA BURIED . . . . . . . . 8.17 5 19.2 26 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.80 84 21.4 393 CRMSMC SECONDARY STRUCTURE . . 6.99 56 21.5 260 CRMSMC SURFACE . . . . . . . . 7.78 64 24.3 263 CRMSMC BURIED . . . . . . . . 7.86 20 15.4 130 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 328 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 268 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 221 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 226 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 102 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.80 84 13.0 644 CRMSALL SECONDARY STRUCTURE . . 6.99 56 13.1 429 CRMSALL SURFACE . . . . . . . . 7.78 64 14.6 438 CRMSALL BURIED . . . . . . . . 7.86 20 9.7 206 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.945 1.000 0.500 21 26.6 79 ERRCA SECONDARY STRUCTURE . . 6.620 1.000 0.500 14 26.9 52 ERRCA SURFACE . . . . . . . . 6.622 1.000 0.500 16 30.2 53 ERRCA BURIED . . . . . . . . 7.978 1.000 0.500 5 19.2 26 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.889 1.000 0.500 84 21.4 393 ERRMC SECONDARY STRUCTURE . . 6.560 1.000 0.500 56 21.5 260 ERRMC SURFACE . . . . . . . . 6.639 1.000 0.500 64 24.3 263 ERRMC BURIED . . . . . . . . 7.689 1.000 0.500 20 15.4 130 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 328 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 268 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 221 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 226 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 102 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.889 1.000 0.500 84 13.0 644 ERRALL SECONDARY STRUCTURE . . 6.560 1.000 0.500 56 13.1 429 ERRALL SURFACE . . . . . . . . 6.639 1.000 0.500 64 14.6 438 ERRALL BURIED . . . . . . . . 7.689 1.000 0.500 20 9.7 206 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 7 19 21 79 DISTCA CA (P) 0.00 0.00 1.27 8.86 24.05 79 DISTCA CA (RMS) 0.00 0.00 2.80 4.07 6.42 DISTCA ALL (N) 0 0 3 28 73 84 644 DISTALL ALL (P) 0.00 0.00 0.47 4.35 11.34 644 DISTALL ALL (RMS) 0.00 0.00 2.60 4.05 6.15 DISTALL END of the results output