####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS481_1_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS481_1_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 3.01 3.01 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 99 - 140 1.97 3.24 LCS_AVERAGE: 88.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.86 3.19 LCS_AVERAGE: 42.02 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 6 45 3 4 4 7 7 10 17 23 37 40 40 43 43 44 45 45 45 45 45 45 LCS_GDT A 97 A 97 4 6 45 3 4 4 6 7 10 12 12 14 17 30 37 43 44 45 45 45 45 45 45 LCS_GDT R 98 R 98 4 6 45 3 4 4 6 6 10 12 13 34 37 41 43 43 44 45 45 45 45 45 45 LCS_GDT G 99 G 99 4 42 45 3 6 11 18 30 36 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT W 100 W 100 12 42 45 6 17 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 101 E 101 12 42 45 7 16 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 102 C 102 12 42 45 7 19 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT T 103 T 103 12 42 45 5 16 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT K 104 K 104 12 42 45 7 17 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT D 105 D 105 12 42 45 7 14 30 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT R 106 R 106 12 42 45 8 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 107 C 107 12 42 45 7 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT G 108 G 108 12 42 45 9 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 109 E 109 12 42 45 8 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT V 110 V 110 12 42 45 8 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT R 111 R 111 12 42 45 3 6 12 22 35 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT N 112 N 112 5 42 45 3 23 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 113 E 113 7 42 45 3 6 15 21 29 35 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 42 45 4 21 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 42 45 7 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 42 45 9 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 42 45 6 23 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 42 45 5 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 42 45 5 23 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 42 45 9 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 42 45 4 23 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 42 45 9 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 42 45 8 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 42 45 5 23 32 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 42 45 6 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 42 45 9 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 42 45 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 42 45 4 23 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 42 45 3 10 28 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 42 45 0 3 3 7 11 19 29 31 41 41 42 43 43 44 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 76.67 ( 42.02 88.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 24 33 37 38 39 40 41 41 41 42 43 43 44 45 45 45 45 45 45 GDT PERCENT_AT 24.44 53.33 73.33 82.22 84.44 86.67 88.89 91.11 91.11 91.11 93.33 95.56 95.56 97.78 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.65 0.97 1.07 1.12 1.24 1.45 1.62 1.62 1.62 1.97 2.35 2.35 2.68 3.01 3.01 3.01 3.01 3.01 3.01 GDT RMS_ALL_AT 3.30 3.25 3.33 3.35 3.34 3.34 3.25 3.30 3.30 3.30 3.24 3.12 3.12 3.04 3.01 3.01 3.01 3.01 3.01 3.01 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 10.206 0 0.624 0.916 11.753 0.000 0.068 LGA A 97 A 97 11.580 0 0.518 0.553 12.271 0.000 0.000 LGA R 98 R 98 9.102 0 0.340 1.018 15.348 4.762 1.861 LGA G 99 G 99 4.915 0 0.287 0.287 6.050 48.690 48.690 LGA W 100 W 100 1.682 0 0.710 1.132 5.007 75.000 45.170 LGA E 101 E 101 1.945 0 0.161 0.909 5.042 72.857 56.825 LGA C 102 C 102 1.469 0 0.203 0.638 2.720 71.071 71.746 LGA T 103 T 103 1.579 0 0.083 0.230 2.969 79.286 70.884 LGA K 104 K 104 1.565 0 0.065 1.375 6.191 75.000 57.937 LGA D 105 D 105 2.126 0 0.164 0.910 6.310 68.810 53.929 LGA R 106 R 106 0.821 0 0.113 1.112 7.669 88.214 62.078 LGA C 107 C 107 1.226 0 0.039 0.684 3.546 88.214 78.175 LGA G 108 G 108 0.688 0 0.145 0.145 0.914 90.476 90.476 LGA E 109 E 109 1.145 0 0.016 0.970 3.517 83.690 75.503 LGA V 110 V 110 1.093 0 0.258 1.296 5.269 71.429 63.061 LGA R 111 R 111 3.254 0 0.061 1.013 14.632 57.738 23.853 LGA N 112 N 112 1.319 0 0.071 1.009 6.288 75.119 54.167 LGA E 113 E 113 4.620 0 0.216 0.942 12.438 42.024 20.688 LGA E 114 E 114 1.563 0 0.510 0.675 5.325 71.071 58.519 LGA N 115 N 115 0.930 0 0.094 1.131 3.248 92.976 83.333 LGA A 116 A 116 1.101 0 0.648 0.639 2.772 79.881 78.476 LGA C 117 C 117 0.718 0 0.077 0.765 1.949 83.810 84.683 LGA H 118 H 118 0.336 0 0.068 0.394 1.695 97.619 91.714 LGA C 119 C 119 0.689 0 0.079 0.295 1.446 97.619 92.222 LGA S 120 S 120 0.530 0 0.040 0.106 0.769 92.857 93.651 LGA E 121 E 121 0.921 0 0.125 0.272 1.388 88.214 87.460 LGA D 122 D 122 0.336 0 0.187 1.086 3.960 95.238 80.536 LGA C 123 C 123 0.432 0 0.077 0.168 1.124 92.976 92.143 LGA L 124 L 124 1.395 0 0.074 1.047 2.761 81.548 72.262 LGA S 125 S 125 0.982 0 0.163 0.642 2.697 83.810 80.476 LGA R 126 R 126 1.290 0 0.185 1.328 5.039 83.690 69.654 LGA G 127 G 127 0.347 0 0.140 0.140 0.577 97.619 97.619 LGA D 128 D 128 0.658 0 0.099 1.123 2.719 90.595 85.357 LGA C 129 C 129 1.021 0 0.050 0.065 1.172 83.690 84.444 LGA C 130 C 130 1.536 0 0.102 0.241 3.304 79.286 71.984 LGA T 131 T 131 1.114 0 0.128 0.140 1.856 85.952 84.082 LGA N 132 N 132 0.405 0 0.113 0.950 3.560 97.619 80.238 LGA Y 133 Y 133 0.567 0 0.059 0.266 1.487 92.857 87.500 LGA Q 134 Q 134 0.934 0 0.067 0.310 2.390 90.476 79.894 LGA V 135 V 135 0.481 0 0.035 0.988 2.204 92.857 85.850 LGA V 136 V 136 0.479 0 0.092 1.136 2.614 95.238 85.034 LGA C 137 C 137 0.698 0 0.179 0.175 1.852 88.214 84.524 LGA K 138 K 138 1.309 0 0.280 0.797 3.494 75.476 65.397 LGA G 139 G 139 2.385 0 0.733 0.733 3.912 56.071 56.071 LGA E 140 E 140 7.808 0 0.421 1.065 13.370 9.048 4.180 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 3.007 2.966 4.356 74.860 66.498 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 41 1.62 81.667 85.704 2.382 LGA_LOCAL RMSD: 1.621 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.299 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 3.007 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.571425 * X + 0.819218 * Y + 0.048530 * Z + -2.722890 Y_new = 0.668806 * X + 0.499147 * Y + -0.550954 * Z + 68.994034 Z_new = -0.475575 * X + -0.282372 * Y + -0.833124 * Z + 4.898448 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.277837 0.495617 -2.814812 [DEG: 130.5104 28.3968 -161.2769 ] ZXZ: 0.087857 2.555528 -2.106606 [DEG: 5.0338 146.4210 -120.6997 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS481_1_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS481_1_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 41 1.62 85.704 3.01 REMARK ---------------------------------------------------------- MOLECULE T0543TS481_1_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 1 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 3IJE_B ATOM 728 N THR 96 10.106 75.175 15.580 1.00 0.00 N ATOM 729 CA THR 96 10.609 76.480 15.901 1.00 0.00 C ATOM 730 CB THR 96 9.672 77.536 15.425 1.00 0.00 C ATOM 731 OG1 THR 96 10.201 78.800 15.756 1.00 0.00 O ATOM 732 CG2 THR 96 8.283 77.342 16.056 1.00 0.00 C ATOM 733 C THR 96 10.809 76.640 17.392 1.00 0.00 C ATOM 734 O THR 96 9.849 76.561 18.157 1.00 0.00 O ATOM 735 N ALA 97 12.064 76.818 17.881 1.00 0.00 N ATOM 736 CA ALA 97 12.169 77.046 19.298 1.00 0.00 C ATOM 737 CB ALA 97 13.620 76.970 19.810 1.00 0.00 C ATOM 738 C ALA 97 11.641 78.409 19.649 1.00 0.00 C ATOM 739 O ALA 97 10.627 78.523 20.338 1.00 0.00 O ATOM 740 N ARG 98 12.359 79.476 19.207 1.00 0.00 N ATOM 741 CA ARG 98 11.939 80.850 19.347 1.00 0.00 C ATOM 742 CB ARG 98 13.103 81.842 19.252 1.00 0.00 C ATOM 743 CG ARG 98 13.903 82.026 20.533 1.00 0.00 C ATOM 744 CD ARG 98 14.863 83.207 20.410 1.00 0.00 C ATOM 745 NE ARG 98 15.124 83.708 21.781 1.00 0.00 N ATOM 746 CZ ARG 98 14.155 84.432 22.411 1.00 0.00 C ATOM 747 NH1 ARG 98 12.944 84.609 21.808 1.00 0.00 H ATOM 748 NH2 ARG 98 14.388 84.959 23.649 1.00 0.00 H ATOM 749 C ARG 98 11.005 81.253 18.251 1.00 0.00 C ATOM 750 O ARG 98 9.845 81.597 18.470 1.00 0.00 O ATOM 751 N GLY 99 11.513 81.137 17.007 1.00 0.00 N ATOM 752 CA GLY 99 10.785 81.483 15.818 1.00 0.00 C ATOM 753 C GLY 99 10.679 82.946 15.593 1.00 0.00 C ATOM 754 O GLY 99 11.534 83.540 14.938 1.00 0.00 O ATOM 755 N TRP 100 9.530 83.512 16.006 1.00 0.00 N ATOM 756 CA TRP 100 9.251 84.905 15.882 1.00 0.00 C ATOM 757 CB TRP 100 10.444 85.887 15.770 1.00 0.00 C ATOM 758 CG TRP 100 11.286 86.002 17.020 1.00 0.00 C ATOM 759 CD2 TRP 100 12.653 85.579 17.133 1.00 0.00 C ATOM 760 CD1 TRP 100 10.962 86.576 18.213 1.00 0.00 C ATOM 761 NE1 TRP 100 12.032 86.520 19.071 1.00 0.00 N ATOM 762 CE2 TRP 100 13.084 85.916 18.417 1.00 0.00 C ATOM 763 CE3 TRP 100 13.482 84.971 16.238 1.00 0.00 C ATOM 764 CZ2 TRP 100 14.357 85.646 18.830 1.00 0.00 C ATOM 765 CZ3 TRP 100 14.758 84.698 16.665 1.00 0.00 C ATOM 766 CH2 TRP 100 15.193 85.025 17.930 1.00 0.00 H ATOM 767 C TRP 100 8.395 85.087 14.690 1.00 0.00 C ATOM 768 O TRP 100 7.642 84.197 14.299 1.00 0.00 O ATOM 769 N GLU 101 8.486 86.281 14.093 1.00 0.00 N ATOM 770 CA GLU 101 7.682 86.603 12.965 1.00 0.00 C ATOM 771 CB GLU 101 6.917 87.915 13.173 1.00 0.00 C ATOM 772 CG GLU 101 5.776 87.806 14.186 1.00 0.00 C ATOM 773 CD GLU 101 6.386 87.666 15.571 1.00 0.00 C ATOM 774 OE1 GLU 101 7.442 88.306 15.821 1.00 0.00 O ATOM 775 OE2 GLU 101 5.805 86.911 16.396 1.00 0.00 O ATOM 776 C GLU 101 8.587 86.786 11.793 1.00 0.00 C ATOM 777 O GLU 101 9.803 86.741 11.931 1.00 0.00 O ATOM 778 N CYS 102 7.988 86.917 10.594 1.00 0.00 N ATOM 779 CA CYS 102 8.664 87.254 9.374 1.00 0.00 C ATOM 780 CB CYS 102 8.273 86.427 8.117 1.00 0.00 C ATOM 781 SG CYS 102 9.307 86.610 6.614 1.00 0.00 S ATOM 782 C CYS 102 8.076 88.565 9.076 1.00 0.00 C ATOM 783 O CYS 102 7.479 89.205 9.937 1.00 0.00 O ATOM 784 N THR 103 8.309 89.031 7.857 1.00 0.00 N ATOM 785 CA THR 103 7.594 90.162 7.397 1.00 0.00 C ATOM 786 CB THR 103 8.238 91.489 7.669 1.00 0.00 C ATOM 787 OG1 THR 103 9.478 91.575 6.992 1.00 0.00 O ATOM 788 CG2 THR 103 8.450 91.653 9.185 1.00 0.00 C ATOM 789 C THR 103 7.560 89.945 5.930 1.00 0.00 C ATOM 790 O THR 103 8.370 89.185 5.404 1.00 0.00 O ATOM 791 N LYS 104 6.617 90.579 5.220 1.00 0.00 N ATOM 792 CA LYS 104 6.581 90.361 3.803 1.00 0.00 C ATOM 793 CB LYS 104 5.592 91.256 3.024 1.00 0.00 C ATOM 794 CG LYS 104 5.132 90.697 1.674 1.00 0.00 C ATOM 795 CD LYS 104 6.259 90.239 0.753 1.00 0.00 C ATOM 796 CE LYS 104 6.321 88.715 0.630 1.00 0.00 C ATOM 797 NZ LYS 104 6.325 88.111 1.981 1.00 0.00 N ATOM 798 C LYS 104 7.870 90.842 3.271 1.00 0.00 C ATOM 799 O LYS 104 8.462 90.236 2.382 1.00 0.00 O ATOM 800 N ASP 105 8.318 91.986 3.805 1.00 0.00 N ATOM 801 CA ASP 105 9.500 92.605 3.300 1.00 0.00 C ATOM 802 CB ASP 105 9.811 93.946 3.984 1.00 0.00 C ATOM 803 CG ASP 105 8.818 94.958 3.436 1.00 0.00 C ATOM 804 OD1 ASP 105 8.892 95.243 2.212 1.00 0.00 O ATOM 805 OD2 ASP 105 7.974 95.461 4.226 1.00 0.00 O ATOM 806 C ASP 105 10.650 91.694 3.515 1.00 0.00 C ATOM 807 O ASP 105 11.485 91.513 2.632 1.00 0.00 O ATOM 808 N ARG 106 10.708 91.066 4.695 1.00 0.00 N ATOM 809 CA ARG 106 11.819 90.224 4.981 1.00 0.00 C ATOM 810 CB ARG 106 11.908 89.818 6.456 1.00 0.00 C ATOM 811 CG ARG 106 12.167 90.997 7.399 1.00 0.00 C ATOM 812 CD ARG 106 13.543 91.638 7.229 1.00 0.00 C ATOM 813 NE ARG 106 14.554 90.659 7.718 1.00 0.00 N ATOM 814 CZ ARG 106 15.817 90.665 7.200 1.00 0.00 C ATOM 815 NH1 ARG 106 16.139 91.552 6.214 1.00 0.00 H ATOM 816 NH2 ARG 106 16.755 89.792 7.669 1.00 0.00 H ATOM 817 C ARG 106 11.773 89.048 4.058 1.00 0.00 C ATOM 818 O ARG 106 12.803 88.451 3.759 1.00 0.00 O ATOM 819 N CYS 107 10.576 88.664 3.580 1.00 0.00 N ATOM 820 CA CYS 107 10.526 87.556 2.669 1.00 0.00 C ATOM 821 CB CYS 107 9.100 87.259 2.173 1.00 0.00 C ATOM 822 SG CYS 107 8.950 85.683 1.285 1.00 0.00 S ATOM 823 C CYS 107 11.396 87.896 1.490 1.00 0.00 C ATOM 824 O CYS 107 11.322 88.996 0.945 1.00 0.00 O ATOM 825 N GLY 108 12.271 86.948 1.086 1.00 0.00 N ATOM 826 CA GLY 108 13.150 87.183 -0.027 1.00 0.00 C ATOM 827 C GLY 108 14.365 87.947 0.416 1.00 0.00 C ATOM 828 O GLY 108 14.923 88.723 -0.358 1.00 0.00 O ATOM 829 N GLU 109 14.821 87.757 1.672 1.00 0.00 N ATOM 830 CA GLU 109 15.982 88.489 2.102 1.00 0.00 C ATOM 831 CB GLU 109 15.805 89.233 3.443 1.00 0.00 C ATOM 832 CG GLU 109 15.379 88.358 4.628 1.00 0.00 C ATOM 833 CD GLU 109 16.550 87.536 5.119 1.00 0.00 C ATOM 834 OE1 GLU 109 17.614 88.152 5.377 1.00 0.00 O ATOM 835 OE2 GLU 109 16.405 86.289 5.223 1.00 0.00 O ATOM 836 C GLU 109 17.148 87.565 2.246 1.00 0.00 C ATOM 837 O GLU 109 16.985 86.363 2.451 1.00 0.00 O ATOM 838 N VAL 110 18.374 88.104 2.082 1.00 0.00 N ATOM 839 CA VAL 110 19.523 87.279 2.311 1.00 0.00 C ATOM 840 CB VAL 110 20.303 86.972 1.055 1.00 0.00 C ATOM 841 CG1 VAL 110 19.442 86.048 0.174 1.00 0.00 C ATOM 842 CG2 VAL 110 20.675 88.285 0.341 1.00 0.00 C ATOM 843 C VAL 110 20.409 87.957 3.316 1.00 0.00 C ATOM 844 O VAL 110 21.370 88.637 2.958 1.00 0.00 O ATOM 845 N ARG 111 20.093 87.778 4.619 1.00 0.00 N ATOM 846 CA ARG 111 20.937 88.304 5.657 1.00 0.00 C ATOM 847 CB ARG 111 21.307 89.782 5.439 1.00 0.00 C ATOM 848 CG ARG 111 20.087 90.699 5.370 1.00 0.00 C ATOM 849 CD ARG 111 20.312 91.959 4.548 1.00 0.00 C ATOM 850 NE ARG 111 19.712 91.716 3.209 1.00 0.00 N ATOM 851 CZ ARG 111 19.317 92.779 2.451 1.00 0.00 C ATOM 852 NH1 ARG 111 19.541 94.050 2.895 1.00 0.00 H ATOM 853 NH2 ARG 111 18.696 92.569 1.255 1.00 0.00 H ATOM 854 C ARG 111 20.215 88.197 6.971 1.00 0.00 C ATOM 855 O ARG 111 19.214 88.874 7.204 1.00 0.00 O ATOM 856 N ASN 112 20.710 87.340 7.886 1.00 0.00 N ATOM 857 CA ASN 112 20.071 87.252 9.171 1.00 0.00 C ATOM 858 CB ASN 112 19.379 85.906 9.440 1.00 0.00 C ATOM 859 CG ASN 112 18.145 85.773 8.571 1.00 0.00 C ATOM 860 OD1 ASN 112 18.222 85.257 7.459 1.00 0.00 O ATOM 861 ND2 ASN 112 16.973 86.226 9.091 1.00 0.00 N ATOM 862 C ASN 112 21.140 87.306 10.205 1.00 0.00 C ATOM 863 O ASN 112 21.834 86.311 10.404 1.00 0.00 O ATOM 864 N GLU 113 21.297 88.446 10.907 1.00 0.00 N ATOM 865 CA GLU 113 22.342 88.496 11.891 1.00 0.00 C ATOM 866 CB GLU 113 22.481 89.881 12.544 1.00 0.00 C ATOM 867 CG GLU 113 22.923 90.978 11.576 1.00 0.00 C ATOM 868 CD GLU 113 23.012 92.270 12.374 1.00 0.00 C ATOM 869 OE1 GLU 113 22.683 92.237 13.589 1.00 0.00 O ATOM 870 OE2 GLU 113 23.416 93.307 11.780 1.00 0.00 O ATOM 871 C GLU 113 22.022 87.539 12.990 1.00 0.00 C ATOM 872 O GLU 113 22.789 86.621 13.274 1.00 0.00 O ATOM 873 N GLU 114 20.848 87.704 13.625 1.00 0.00 N ATOM 874 CA GLU 114 20.519 86.794 14.677 1.00 0.00 C ATOM 875 CB GLU 114 20.774 87.365 16.082 1.00 0.00 C ATOM 876 CG GLU 114 22.255 87.593 16.392 1.00 0.00 C ATOM 877 CD GLU 114 22.331 88.237 17.768 1.00 0.00 C ATOM 878 OE1 GLU 114 21.260 88.337 18.425 1.00 0.00 O ATOM 879 OE2 GLU 114 23.451 88.643 18.178 1.00 0.00 O ATOM 880 C GLU 114 19.068 86.539 14.560 1.00 0.00 C ATOM 881 O GLU 114 18.242 87.267 15.112 1.00 0.00 O ATOM 882 N ASN 115 18.704 85.473 13.843 1.00 0.00 N ATOM 883 CA ASN 115 17.300 85.310 13.723 1.00 0.00 C ATOM 884 CB ASN 115 16.769 85.860 12.388 1.00 0.00 C ATOM 885 CG ASN 115 17.307 87.279 12.189 1.00 0.00 C ATOM 886 OD1 ASN 115 18.075 87.511 11.257 1.00 0.00 O ATOM 887 ND2 ASN 115 16.913 88.254 13.054 1.00 0.00 N ATOM 888 C ASN 115 17.038 83.854 13.708 1.00 0.00 C ATOM 889 O ASN 115 17.606 83.115 12.907 1.00 0.00 O ATOM 890 N ALA 116 16.189 83.386 14.627 1.00 0.00 N ATOM 891 CA ALA 116 15.786 82.036 14.470 1.00 0.00 C ATOM 892 CB ALA 116 14.974 81.478 15.651 1.00 0.00 C ATOM 893 C ALA 116 14.876 82.158 13.305 1.00 0.00 C ATOM 894 O ALA 116 14.326 83.236 13.077 1.00 0.00 O ATOM 895 N CYS 117 14.760 81.094 12.495 1.00 0.00 N ATOM 896 CA CYS 117 13.803 81.135 11.434 1.00 0.00 C ATOM 897 CB CYS 117 12.452 81.624 11.924 1.00 0.00 C ATOM 898 SG CYS 117 11.151 81.097 10.822 1.00 0.00 S ATOM 899 C CYS 117 14.288 82.054 10.360 1.00 0.00 C ATOM 900 O CYS 117 15.035 82.993 10.625 1.00 0.00 O ATOM 901 N HIS 118 13.869 81.795 9.102 1.00 0.00 N ATOM 902 CA HIS 118 14.328 82.601 8.007 1.00 0.00 C ATOM 903 ND1 HIS 118 17.051 81.040 8.841 1.00 0.00 N ATOM 904 CG HIS 118 16.716 81.817 7.756 1.00 0.00 C ATOM 905 CB HIS 118 15.360 81.879 7.128 1.00 0.00 C ATOM 906 NE2 HIS 118 18.886 82.152 8.261 1.00 0.00 N ATOM 907 CD2 HIS 118 17.848 82.487 7.414 1.00 0.00 C ATOM 908 CE1 HIS 118 18.361 81.280 9.101 1.00 0.00 C ATOM 909 C HIS 118 13.193 82.955 7.092 1.00 0.00 C ATOM 910 O HIS 118 12.301 82.151 6.829 1.00 0.00 O ATOM 911 N CYS 119 13.195 84.229 6.655 1.00 0.00 N ATOM 912 CA CYS 119 12.336 84.887 5.700 1.00 0.00 C ATOM 913 CB CYS 119 12.255 86.429 5.865 1.00 0.00 C ATOM 914 SG CYS 119 11.203 87.013 7.240 1.00 0.00 S ATOM 915 C CYS 119 12.813 84.620 4.302 1.00 0.00 C ATOM 916 O CYS 119 12.335 85.261 3.365 1.00 0.00 O ATOM 917 N SER 120 13.861 83.794 4.120 1.00 0.00 N ATOM 918 CA SER 120 14.431 83.705 2.802 1.00 0.00 C ATOM 919 CB SER 120 15.969 83.708 2.821 1.00 0.00 C ATOM 920 OG SER 120 16.451 82.572 3.522 1.00 0.00 O ATOM 921 C SER 120 13.987 82.492 2.045 1.00 0.00 C ATOM 922 O SER 120 13.408 81.559 2.590 1.00 0.00 O ATOM 923 N GLU 121 14.254 82.505 0.723 1.00 0.00 N ATOM 924 CA GLU 121 13.890 81.466 -0.202 1.00 0.00 C ATOM 925 CB GLU 121 14.238 81.836 -1.652 1.00 0.00 C ATOM 926 CG GLU 121 13.507 83.092 -2.131 1.00 0.00 C ATOM 927 CD GLU 121 12.011 82.855 -1.986 1.00 0.00 C ATOM 928 OE1 GLU 121 11.517 81.837 -2.540 1.00 0.00 O ATOM 929 OE2 GLU 121 11.345 83.686 -1.314 1.00 0.00 O ATOM 930 C GLU 121 14.652 80.227 0.146 1.00 0.00 C ATOM 931 O GLU 121 14.154 79.111 0.000 1.00 0.00 O ATOM 932 N ASP 122 15.888 80.408 0.638 1.00 0.00 N ATOM 933 CA ASP 122 16.768 79.324 0.958 1.00 0.00 C ATOM 934 CB ASP 122 18.100 79.818 1.545 1.00 0.00 C ATOM 935 CG ASP 122 19.063 78.643 1.624 1.00 0.00 C ATOM 936 OD1 ASP 122 18.680 77.521 1.197 1.00 0.00 O ATOM 937 OD2 ASP 122 20.197 78.860 2.128 1.00 0.00 O ATOM 938 C ASP 122 16.097 78.481 1.997 1.00 0.00 C ATOM 939 O ASP 122 16.302 77.270 2.055 1.00 0.00 O ATOM 940 N CYS 123 15.244 79.106 2.830 1.00 0.00 N ATOM 941 CA CYS 123 14.611 78.410 3.911 1.00 0.00 C ATOM 942 CB CYS 123 13.632 79.251 4.753 1.00 0.00 C ATOM 943 SG CYS 123 12.027 79.519 3.937 1.00 0.00 S ATOM 944 C CYS 123 13.809 77.291 3.350 1.00 0.00 C ATOM 945 O CYS 123 13.580 76.302 4.039 1.00 0.00 O ATOM 946 N LEU 124 13.324 77.415 2.103 1.00 0.00 N ATOM 947 CA LEU 124 12.531 76.343 1.578 1.00 0.00 C ATOM 948 CB LEU 124 12.069 76.601 0.135 1.00 0.00 C ATOM 949 CG LEU 124 10.993 75.617 -0.367 1.00 0.00 C ATOM 950 CD1 LEU 124 11.506 74.172 -0.466 1.00 0.00 C ATOM 951 CD2 LEU 124 9.715 75.735 0.477 1.00 0.00 C ATOM 952 C LEU 124 13.397 75.124 1.583 1.00 0.00 C ATOM 953 O LEU 124 12.964 74.046 1.985 1.00 0.00 O ATOM 954 N SER 125 14.655 75.273 1.137 1.00 0.00 N ATOM 955 CA SER 125 15.584 74.182 1.142 1.00 0.00 C ATOM 956 CB SER 125 16.907 74.539 0.448 1.00 0.00 C ATOM 957 OG SER 125 16.662 75.023 -0.861 1.00 0.00 O ATOM 958 C SER 125 15.961 73.902 2.562 1.00 0.00 C ATOM 959 O SER 125 16.065 72.750 2.981 1.00 0.00 O ATOM 960 N ARG 126 16.152 74.986 3.339 1.00 0.00 N ATOM 961 CA ARG 126 16.680 74.913 4.671 1.00 0.00 C ATOM 962 CB ARG 126 16.832 76.298 5.322 1.00 0.00 C ATOM 963 CG ARG 126 17.826 77.217 4.610 1.00 0.00 C ATOM 964 CD ARG 126 19.288 76.789 4.773 1.00 0.00 C ATOM 965 NE ARG 126 19.600 76.790 6.229 1.00 0.00 N ATOM 966 CZ ARG 126 20.004 77.941 6.840 1.00 0.00 C ATOM 967 NH1 ARG 126 20.132 79.091 6.118 1.00 0.00 H ATOM 968 NH2 ARG 126 20.279 77.943 8.177 1.00 0.00 H ATOM 969 C ARG 126 15.788 74.118 5.572 1.00 0.00 C ATOM 970 O ARG 126 16.263 73.276 6.333 1.00 0.00 O ATOM 971 N GLY 127 14.467 74.344 5.495 1.00 0.00 N ATOM 972 CA GLY 127 13.549 73.712 6.396 1.00 0.00 C ATOM 973 C GLY 127 13.406 74.639 7.569 1.00 0.00 C ATOM 974 O GLY 127 12.843 74.282 8.601 1.00 0.00 O ATOM 975 N ASP 128 14.020 75.830 7.429 1.00 0.00 N ATOM 976 CA ASP 128 14.072 76.972 8.308 1.00 0.00 C ATOM 977 CB ASP 128 15.210 77.954 7.983 1.00 0.00 C ATOM 978 CG ASP 128 16.547 77.354 8.333 1.00 0.00 C ATOM 979 OD1 ASP 128 16.565 76.151 8.694 1.00 0.00 O ATOM 980 OD2 ASP 128 17.565 78.090 8.250 1.00 0.00 O ATOM 981 C ASP 128 12.883 77.872 8.187 1.00 0.00 C ATOM 982 O ASP 128 12.843 78.889 8.870 1.00 0.00 O ATOM 983 N CYS 129 11.981 77.666 7.219 1.00 0.00 N ATOM 984 CA CYS 129 10.933 78.637 7.053 1.00 0.00 C ATOM 985 CB CYS 129 10.028 78.305 5.858 1.00 0.00 C ATOM 986 SG CYS 129 10.948 77.858 4.357 1.00 0.00 S ATOM 987 C CYS 129 10.051 78.543 8.252 1.00 0.00 C ATOM 988 O CYS 129 9.751 77.442 8.702 1.00 0.00 O ATOM 989 N CYS 130 9.579 79.657 8.852 1.00 0.00 N ATOM 990 CA CYS 130 8.699 79.208 9.881 1.00 0.00 C ATOM 991 CB CYS 130 8.430 80.002 11.159 1.00 0.00 C ATOM 992 SG CYS 130 9.908 80.238 12.154 1.00 0.00 S ATOM 993 C CYS 130 7.385 78.932 9.268 1.00 0.00 C ATOM 994 O CYS 130 7.179 79.108 8.068 1.00 0.00 O ATOM 995 N THR 131 6.452 78.505 10.125 1.00 0.00 N ATOM 996 CA THR 131 5.190 78.021 9.676 1.00 0.00 C ATOM 997 CB THR 131 4.321 77.565 10.816 1.00 0.00 C ATOM 998 OG1 THR 131 4.115 78.626 11.735 1.00 0.00 O ATOM 999 CG2 THR 131 5.012 76.381 11.516 1.00 0.00 C ATOM 1000 C THR 131 4.440 79.054 8.898 1.00 0.00 C ATOM 1001 O THR 131 3.856 78.742 7.864 1.00 0.00 O ATOM 1002 N ASN 132 4.441 80.306 9.372 1.00 0.00 N ATOM 1003 CA ASN 132 3.734 81.396 8.761 1.00 0.00 C ATOM 1004 CB ASN 132 3.674 82.654 9.625 1.00 0.00 C ATOM 1005 CG ASN 132 2.704 82.413 10.774 1.00 0.00 C ATOM 1006 OD1 ASN 132 3.098 82.381 11.938 1.00 0.00 O ATOM 1007 ND2 ASN 132 1.398 82.240 10.439 1.00 0.00 N ATOM 1008 C ASN 132 4.367 81.761 7.460 1.00 0.00 C ATOM 1009 O ASN 132 3.789 82.497 6.666 1.00 0.00 O ATOM 1010 N TYR 133 5.588 81.271 7.211 1.00 0.00 N ATOM 1011 CA TYR 133 6.322 81.665 6.043 1.00 0.00 C ATOM 1012 CB TYR 133 7.612 80.825 5.920 1.00 0.00 C ATOM 1013 CG TYR 133 8.178 80.870 4.540 1.00 0.00 C ATOM 1014 CD1 TYR 133 8.875 81.962 4.076 1.00 0.00 C ATOM 1015 CD2 TYR 133 8.037 79.773 3.714 1.00 0.00 C ATOM 1016 CE1 TYR 133 9.389 81.963 2.800 1.00 0.00 C ATOM 1017 CE2 TYR 133 8.550 79.772 2.438 1.00 0.00 C ATOM 1018 CZ TYR 133 9.232 80.872 1.979 1.00 0.00 C ATOM 1019 OH TYR 133 9.765 80.883 0.672 1.00 0.00 H ATOM 1020 C TYR 133 5.507 81.477 4.796 1.00 0.00 C ATOM 1021 O TYR 133 5.415 82.394 3.982 1.00 0.00 O ATOM 1022 N GLN 134 4.873 80.311 4.598 1.00 0.00 N ATOM 1023 CA GLN 134 4.128 80.156 3.383 1.00 0.00 C ATOM 1024 CB GLN 134 3.707 78.698 3.159 1.00 0.00 C ATOM 1025 CG GLN 134 4.934 77.820 2.883 1.00 0.00 C ATOM 1026 CD GLN 134 4.511 76.366 2.773 1.00 0.00 C ATOM 1027 OE1 GLN 134 3.931 75.815 3.705 1.00 0.00 O ATOM 1028 NE2 GLN 134 4.821 75.722 1.616 1.00 0.00 N ATOM 1029 C GLN 134 2.937 81.058 3.396 1.00 0.00 C ATOM 1030 O GLN 134 2.595 81.654 2.373 1.00 0.00 O ATOM 1031 N VAL 135 2.264 81.196 4.553 1.00 0.00 N ATOM 1032 CA VAL 135 1.097 82.023 4.546 1.00 0.00 C ATOM 1033 CB VAL 135 0.295 81.966 5.827 1.00 0.00 C ATOM 1034 CG1 VAL 135 1.074 82.608 6.985 1.00 0.00 C ATOM 1035 CG2 VAL 135 -1.073 82.618 5.563 1.00 0.00 C ATOM 1036 C VAL 135 1.475 83.443 4.244 1.00 0.00 C ATOM 1037 O VAL 135 0.885 84.065 3.362 1.00 0.00 O ATOM 1038 N VAL 136 2.476 83.991 4.963 1.00 0.00 N ATOM 1039 CA VAL 136 2.885 85.358 4.775 1.00 0.00 C ATOM 1040 CB VAL 136 3.843 85.826 5.832 1.00 0.00 C ATOM 1041 CG1 VAL 136 3.091 85.879 7.175 1.00 0.00 C ATOM 1042 CG2 VAL 136 5.068 84.893 5.854 1.00 0.00 C ATOM 1043 C VAL 136 3.521 85.575 3.435 1.00 0.00 C ATOM 1044 O VAL 136 3.112 86.454 2.678 1.00 0.00 O ATOM 1045 N CYS 137 4.535 84.769 3.081 1.00 0.00 N ATOM 1046 CA CYS 137 5.183 85.021 1.830 1.00 0.00 C ATOM 1047 CB CYS 137 6.386 84.103 1.559 1.00 0.00 C ATOM 1048 SG CYS 137 7.836 84.550 2.555 1.00 0.00 S ATOM 1049 C CYS 137 4.194 84.804 0.741 1.00 0.00 C ATOM 1050 O CYS 137 4.035 85.647 -0.140 1.00 0.00 O ATOM 1051 N LYS 138 3.471 83.674 0.781 1.00 0.00 N ATOM 1052 CA LYS 138 2.527 83.466 -0.274 1.00 0.00 C ATOM 1053 CB LYS 138 2.378 81.994 -0.708 1.00 0.00 C ATOM 1054 CG LYS 138 3.596 81.390 -1.414 1.00 0.00 C ATOM 1055 CD LYS 138 4.814 81.192 -0.511 1.00 0.00 C ATOM 1056 CE LYS 138 5.911 80.338 -1.152 1.00 0.00 C ATOM 1057 NZ LYS 138 6.501 81.046 -2.311 1.00 0.00 N ATOM 1058 C LYS 138 1.194 83.874 0.256 1.00 0.00 C ATOM 1059 O LYS 138 0.306 83.036 0.416 1.00 0.00 O ATOM 1060 N GLY 139 1.021 85.185 0.525 1.00 0.00 N ATOM 1061 CA GLY 139 -0.224 85.652 1.062 1.00 0.00 C ATOM 1062 C GLY 139 -0.984 86.399 0.014 1.00 0.00 C ATOM 1063 O GLY 139 -0.759 86.229 -1.185 1.00 0.00 O ATOM 1064 N GLU 140 -1.935 87.241 0.486 1.00 0.00 N ATOM 1065 CA GLU 140 -2.754 88.053 -0.366 1.00 0.00 C ATOM 1066 CB GLU 140 -4.155 87.434 -0.528 1.00 0.00 C ATOM 1067 CG GLU 140 -5.116 88.217 -1.422 1.00 0.00 C ATOM 1068 CD GLU 140 -6.421 87.431 -1.475 1.00 0.00 C ATOM 1069 OE1 GLU 140 -7.012 87.184 -0.390 1.00 0.00 O ATOM 1070 OE2 GLU 140 -6.834 87.057 -2.605 1.00 0.00 O ATOM 1071 C GLU 140 -2.936 89.392 0.295 1.00 0.00 C ATOM 1072 O GLU 140 -4.024 89.695 0.777 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.58 63.6 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 64.55 59.7 62 100.0 62 ARMSMC BURIED . . . . . . . . 49.85 73.1 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.42 48.7 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 74.28 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 81.96 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 70.79 53.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.62 47.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 81.01 55.6 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 92.28 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 96.62 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.34 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 80.32 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 58.12 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 121.08 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 110.22 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 110.22 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 123.69 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 76.48 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.01 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.01 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0668 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 3.42 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.58 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.12 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 3.54 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.70 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.58 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.82 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.83 112 100.0 112 CRMSSC BURIED . . . . . . . . 5.02 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.41 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.68 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.73 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.249 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 2.623 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 1.331 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.327 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.726 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 1.367 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.363 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 4.535 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 4.769 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 3.503 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.247 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 3.619 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 2.398 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 12 31 34 40 45 45 45 DISTCA CA (P) 26.67 68.89 75.56 88.89 100.00 45 DISTCA CA (RMS) 0.75 1.31 1.42 1.84 3.01 DISTCA ALL (N) 60 169 221 273 330 345 345 DISTALL ALL (P) 17.39 48.99 64.06 79.13 95.65 345 DISTALL ALL (RMS) 0.71 1.30 1.64 2.21 3.63 DISTALL END of the results output