####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 42 ( 324), selected 42 , name T0543TS458_1_2 # Molecule2: number of CA atoms 784 ( 6318), selected 42 , name T0543.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS458_1_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 100 - 141 2.77 2.77 LCS_AVERAGE: 5.36 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 100 - 139 1.58 3.01 LCS_AVERAGE: 4.90 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 109 - 138 0.94 3.13 LCS_AVERAGE: 2.89 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 42 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT W 100 W 100 4 40 42 3 24 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 101 E 101 4 40 42 5 24 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 102 C 102 4 40 42 9 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT T 103 T 103 4 40 42 3 22 29 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT K 104 K 104 3 40 42 3 3 3 6 30 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT D 105 D 105 5 40 42 4 24 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT R 106 R 106 5 40 42 10 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 107 C 107 5 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT G 108 G 108 7 40 42 3 4 10 31 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 109 E 109 30 40 42 4 16 31 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT V 110 V 110 30 40 42 5 24 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT R 111 R 111 30 40 42 11 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT N 112 N 112 30 40 42 4 24 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 113 E 113 30 40 42 6 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 114 E 114 30 40 42 6 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT N 115 N 115 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT A 116 A 116 30 40 42 9 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 117 C 117 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT H 118 H 118 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 119 C 119 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT S 120 S 120 30 40 42 12 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 121 E 121 30 40 42 11 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT D 122 D 122 30 40 42 6 13 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 123 C 123 30 40 42 12 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT L 124 L 124 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT S 125 S 125 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT R 126 R 126 30 40 42 5 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT G 127 G 127 30 40 42 5 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT D 128 D 128 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 129 C 129 30 40 42 10 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 130 C 130 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT T 131 T 131 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT N 132 N 132 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT Y 133 Y 133 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT Q 134 Q 134 30 40 42 11 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT V 135 V 135 30 40 42 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT V 136 V 136 30 40 42 12 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT C 137 C 137 30 40 42 9 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT K 138 K 138 30 40 42 3 9 32 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT G 139 G 139 4 40 42 3 4 4 17 34 38 39 40 40 40 40 41 41 41 41 41 42 42 42 42 LCS_GDT E 140 E 140 4 6 42 3 4 4 6 6 9 10 14 16 37 40 41 41 41 41 41 42 42 42 42 LCS_GDT S 141 S 141 4 6 42 3 4 4 6 6 7 7 7 10 11 13 24 26 30 39 40 42 42 42 42 LCS_AVERAGE LCS_A: 4.38 ( 2.89 4.90 5.36 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 27 33 37 38 39 39 40 40 40 40 41 41 41 41 41 42 42 42 42 GDT PERCENT_AT 1.66 3.44 4.21 4.72 4.85 4.97 4.97 5.10 5.10 5.10 5.10 5.23 5.23 5.23 5.23 5.23 5.36 5.36 5.36 5.36 GDT RMS_LOCAL 0.33 0.66 0.85 1.03 1.15 1.31 1.31 1.58 1.58 1.58 1.58 2.11 2.11 2.11 2.11 2.11 2.77 2.77 2.77 2.77 GDT RMS_ALL_AT 3.05 3.16 3.21 3.18 3.15 3.16 3.16 3.01 3.01 3.01 3.01 2.85 2.85 2.85 2.85 2.85 2.77 2.77 2.77 2.77 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA W 100 W 100 1.612 0 0.437 0.839 3.695 79.405 61.599 LGA E 101 E 101 1.602 0 0.057 0.381 3.975 75.000 62.804 LGA C 102 C 102 0.980 0 0.648 0.995 3.323 78.095 79.286 LGA T 103 T 103 2.125 0 0.654 0.549 4.911 66.905 53.401 LGA K 104 K 104 4.039 0 0.530 1.200 14.175 45.357 22.381 LGA D 105 D 105 1.880 0 0.253 0.338 2.738 77.143 73.095 LGA R 106 R 106 0.695 0 0.058 0.768 3.202 92.976 77.489 LGA C 107 C 107 0.813 0 0.627 0.968 3.251 86.429 79.524 LGA G 108 G 108 2.932 0 0.184 0.184 2.932 62.857 62.857 LGA E 109 E 109 1.522 0 0.623 0.637 3.558 69.286 62.116 LGA V 110 V 110 1.949 0 0.197 1.209 4.252 70.833 61.224 LGA R 111 R 111 0.696 0 0.068 1.451 7.699 83.810 66.407 LGA N 112 N 112 1.303 0 0.035 0.594 3.896 85.952 74.762 LGA E 113 E 113 0.964 0 0.114 0.582 2.401 90.476 79.788 LGA E 114 E 114 1.040 0 0.150 0.946 5.930 90.714 65.556 LGA N 115 N 115 0.332 0 0.062 0.269 1.768 95.238 90.655 LGA A 116 A 116 0.832 0 0.080 0.098 1.144 92.857 90.571 LGA C 117 C 117 0.260 0 0.099 0.683 1.586 97.619 92.302 LGA H 118 H 118 0.595 0 0.025 1.050 2.542 90.476 82.810 LGA C 119 C 119 0.528 0 0.155 0.310 1.175 88.214 88.968 LGA S 120 S 120 0.861 0 0.034 0.100 1.494 90.476 87.460 LGA E 121 E 121 1.153 0 0.124 0.937 3.002 79.286 74.339 LGA D 122 D 122 1.972 0 0.169 0.458 3.531 79.405 66.548 LGA C 123 C 123 0.541 0 0.060 0.532 1.894 92.976 89.206 LGA L 124 L 124 0.857 0 0.059 1.049 2.995 88.214 81.845 LGA S 125 S 125 1.018 0 0.138 0.675 2.946 85.952 80.397 LGA R 126 R 126 0.814 0 0.074 1.375 4.323 90.595 77.749 LGA G 127 G 127 1.332 0 0.059 0.059 1.449 83.690 83.690 LGA D 128 D 128 0.348 0 0.077 0.222 1.463 100.000 94.107 LGA C 129 C 129 0.842 0 0.022 0.212 1.069 90.476 88.968 LGA C 130 C 130 0.268 0 0.069 0.114 0.586 97.619 98.413 LGA T 131 T 131 0.595 0 0.103 0.101 1.266 97.619 90.680 LGA N 132 N 132 0.656 0 0.090 0.602 2.279 97.619 89.702 LGA Y 133 Y 133 0.344 0 0.065 0.374 1.143 95.238 90.556 LGA Q 134 Q 134 1.023 0 0.078 0.735 4.124 88.214 72.275 LGA V 135 V 135 0.402 0 0.039 0.097 1.288 92.976 90.612 LGA V 136 V 136 0.937 0 0.119 0.110 1.565 85.952 82.789 LGA C 137 C 137 1.263 0 0.515 0.448 2.725 75.357 73.175 LGA K 138 K 138 1.519 0 0.641 1.066 11.558 58.929 34.550 LGA G 139 G 139 5.413 0 0.510 0.510 7.689 22.500 22.500 LGA E 140 E 140 9.596 0 0.111 1.020 10.584 2.262 1.958 LGA S 141 S 141 13.745 0 0.055 0.097 17.184 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 42 168 168 100.00 324 324 100.00 784 SUMMARY(RMSD_GDC): 2.775 2.918 3.545 4.228 3.825 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 42 784 4.0 40 1.58 4.624 4.818 2.384 LGA_LOCAL RMSD: 1.578 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.010 Number of assigned atoms: 42 Std_ASGN_ATOMS RMSD: 2.775 Standard rmsd on all 42 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.844076 * X + -0.532140 * Y + 0.066054 * Z + 0.140638 Y_new = 0.494341 * X + 0.724494 * Y + -0.480349 * Z + 77.688515 Z_new = 0.207757 * X + 0.438104 * Y + 0.874587 * Z + -40.127106 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.529808 -0.209281 0.464389 [DEG: 30.3558 -11.9909 26.6075 ] ZXZ: 0.136655 0.506214 0.442810 [DEG: 7.8298 29.0039 25.3712 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS458_1_2 REMARK 2: T0543.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS458_1_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 42 784 4.0 40 1.58 4.818 2.77 REMARK ---------------------------------------------------------- MOLECULE T0543TS458_1_2 REMARK PARENT number 2 PFRMAT TS TARGET T0543 PARENT 1oc0_B ATOM 755 N TRP 100 9.790 84.827 15.983 1.00112.35 1SG 756 ATOM 756 CA TRP 100 10.130 84.368 14.674 1.00112.35 1SG 757 ATOM 757 CB TRP 100 10.280 82.841 14.605 1.00112.35 1SG 758 ATOM 758 CG TRP 100 11.312 82.261 15.538 1.00112.35 1SG 759 ATOM 759 CD2 TRP 100 11.582 80.856 15.643 1.00112.35 1SG 760 ATOM 760 CD1 TRP 100 12.127 82.882 16.437 1.00112.35 1SG 761 ATOM 761 NE1 TRP 100 12.883 81.948 17.105 1.00112.35 1SG 762 ATOM 762 CE2 TRP 100 12.559 80.697 16.624 1.00112.35 1SG 763 ATOM 763 CE3 TRP 100 11.054 79.785 14.980 1.00112.35 1SG 764 ATOM 764 CZ2 TRP 100 13.027 79.459 16.959 1.00112.35 1SG 765 ATOM 765 CZ3 TRP 100 11.531 78.538 15.317 1.00112.35 1SG 766 ATOM 766 CH2 TRP 100 12.498 78.378 16.287 1.00112.35 1SG 767 ATOM 767 C TRP 100 8.964 84.659 13.787 1.00112.35 1SG 768 ATOM 768 O TRP 100 8.071 83.824 13.657 1.00112.35 1SG 769 ATOM 769 N GLU 101 8.940 85.829 13.122 1.00 52.48 1SG 770 ATOM 770 CA GLU 101 7.824 86.082 12.259 1.00 52.48 1SG 771 ATOM 771 CB GLU 101 6.916 87.229 12.731 1.00 52.48 1SG 772 ATOM 772 CG GLU 101 6.162 86.926 14.027 1.00 52.48 1SG 773 ATOM 773 CD GLU 101 5.314 88.142 14.366 1.00 52.48 1SG 774 ATOM 774 OE1 GLU 101 5.819 89.284 14.188 1.00 52.48 1SG 775 ATOM 775 OE2 GLU 101 4.147 87.948 14.799 1.00 52.48 1SG 776 ATOM 776 C GLU 101 8.371 86.473 10.929 1.00 52.48 1SG 777 ATOM 777 O GLU 101 9.252 87.324 10.831 1.00 52.48 1SG 778 ATOM 778 N CYS 102 7.934 85.764 9.876 1.00109.64 1SG 779 ATOM 779 CA CYS 102 8.291 86.072 8.523 1.00109.64 1SG 780 ATOM 780 CB CYS 102 8.162 84.860 7.587 1.00109.64 1SG 781 ATOM 781 SG CYS 102 9.115 85.079 6.066 1.00109.64 1SG 782 ATOM 782 C CYS 102 7.403 87.160 8.028 1.00109.64 1SG 783 ATOM 783 O CYS 102 7.732 87.911 7.109 1.00109.64 1SG 784 ATOM 784 N THR 103 6.242 87.266 8.684 1.00116.44 1SG 785 ATOM 785 CA THR 103 5.154 88.075 8.252 1.00116.44 1SG 786 ATOM 786 CB THR 103 4.008 88.069 9.221 1.00116.44 1SG 787 ATOM 787 OG1 THR 103 4.410 88.634 10.460 1.00116.44 1SG 788 ATOM 788 CG2 THR 103 3.549 86.615 9.428 1.00116.44 1SG 789 ATOM 789 C THR 103 5.619 89.471 8.116 1.00116.44 1SG 790 ATOM 790 O THR 103 5.109 90.205 7.272 1.00116.44 1SG 791 ATOM 791 N LYS 104 6.597 89.899 8.931 1.00246.98 1SG 792 ATOM 792 CA LYS 104 6.854 91.300 8.813 1.00246.98 1SG 793 ATOM 793 CB LYS 104 7.430 91.971 10.080 1.00246.98 1SG 794 ATOM 794 CG LYS 104 8.803 91.472 10.530 1.00246.98 1SG 795 ATOM 795 CD LYS 104 8.799 90.020 10.992 1.00246.98 1SG 796 ATOM 796 CE LYS 104 8.234 89.844 12.402 1.00246.98 1SG 797 ATOM 797 NZ LYS 104 9.149 90.450 13.394 1.00246.98 1SG 798 ATOM 798 C LYS 104 7.747 91.631 7.657 1.00246.98 1SG 799 ATOM 799 O LYS 104 8.917 91.961 7.839 1.00246.98 1SG 800 ATOM 800 N ASP 105 7.192 91.541 6.429 1.00134.34 1SG 801 ATOM 801 CA ASP 105 7.801 91.959 5.194 1.00134.34 1SG 802 ATOM 802 CB ASP 105 7.764 93.481 4.936 1.00134.34 1SG 803 ATOM 803 CG ASP 105 8.604 94.217 5.971 1.00134.34 1SG 804 ATOM 804 OD1 ASP 105 8.174 94.291 7.153 1.00134.34 1SG 805 ATOM 805 OD2 ASP 105 9.694 94.721 5.588 1.00134.34 1SG 806 ATOM 806 C ASP 105 9.219 91.506 5.158 1.00134.34 1SG 807 ATOM 807 O ASP 105 10.073 92.162 4.564 1.00134.34 1SG 808 ATOM 808 N ARG 106 9.491 90.370 5.817 1.00127.75 1SG 809 ATOM 809 CA ARG 106 10.794 89.784 5.914 1.00127.75 1SG 810 ATOM 810 CB ARG 106 10.935 88.832 7.112 1.00127.75 1SG 811 ATOM 811 CG ARG 106 12.377 88.397 7.370 1.00127.75 1SG 812 ATOM 812 CD ARG 106 12.608 87.863 8.784 1.00127.75 1SG 813 ATOM 813 NE ARG 106 13.989 87.306 8.825 1.00127.75 1SG 814 ATOM 814 CZ ARG 106 14.170 85.958 8.728 1.00127.75 1SG 815 ATOM 815 NH1 ARG 106 13.085 85.134 8.668 1.00127.75 1SG 816 ATOM 816 NH2 ARG 106 15.429 85.432 8.696 1.00127.75 1SG 817 ATOM 817 C ARG 106 11.145 89.061 4.647 1.00127.75 1SG 818 ATOM 818 O ARG 106 12.308 88.741 4.399 1.00127.75 1SG 819 ATOM 819 N CYS 107 10.130 88.762 3.822 1.00100.05 1SG 820 ATOM 820 CA CYS 107 10.249 87.924 2.661 1.00100.05 1SG 821 ATOM 821 CB CYS 107 8.911 87.812 1.916 1.00100.05 1SG 822 ATOM 822 SG CYS 107 8.830 86.383 0.806 1.00100.05 1SG 823 ATOM 823 C CYS 107 11.279 88.463 1.703 1.00100.05 1SG 824 ATOM 824 O CYS 107 11.942 87.699 1.006 1.00100.05 1SG 825 ATOM 825 N GLY 108 11.380 89.795 1.578 1.00 53.62 1SG 826 ATOM 826 CA GLY 108 12.310 90.472 0.708 1.00 53.62 1SG 827 ATOM 827 C GLY 108 13.740 90.421 1.184 1.00 53.62 1SG 828 ATOM 828 O GLY 108 14.671 90.488 0.381 1.00 53.62 1SG 829 ATOM 829 N GLU 109 13.931 90.345 2.514 1.00127.88 1SG 830 ATOM 830 CA GLU 109 15.162 90.543 3.240 1.00127.88 1SG 831 ATOM 831 CB GLU 109 14.906 90.396 4.749 1.00127.88 1SG 832 ATOM 832 CG GLU 109 16.115 90.644 5.644 1.00127.88 1SG 833 ATOM 833 CD GLU 109 15.623 90.516 7.080 1.00127.88 1SG 834 ATOM 834 OE1 GLU 109 14.667 91.253 7.443 1.00127.88 1SG 835 ATOM 835 OE2 GLU 109 16.187 89.676 7.831 1.00127.88 1SG 836 ATOM 836 C GLU 109 16.296 89.626 2.866 1.00127.88 1SG 837 ATOM 837 O GLU 109 17.428 90.103 2.808 1.00127.88 1SG 838 ATOM 838 N VAL 110 16.057 88.307 2.674 1.00135.87 1SG 839 ATOM 839 CA VAL 110 17.062 87.335 2.298 1.00135.87 1SG 840 ATOM 840 CB VAL 110 18.225 87.881 1.483 1.00135.87 1SG 841 ATOM 841 CG1 VAL 110 19.158 86.761 0.987 1.00135.87 1SG 842 ATOM 842 CG2 VAL 110 17.632 88.727 0.345 1.00135.87 1SG 843 ATOM 843 C VAL 110 17.491 86.680 3.587 1.00135.87 1SG 844 ATOM 844 O VAL 110 16.797 86.808 4.595 1.00135.87 1SG 845 ATOM 845 N ARG 111 18.617 85.935 3.603 1.00 79.47 1SG 846 ATOM 846 CA ARG 111 19.021 85.231 4.786 1.00 79.47 1SG 847 ATOM 847 CB ARG 111 20.113 84.173 4.532 1.00 79.47 1SG 848 ATOM 848 CG ARG 111 20.520 83.408 5.793 1.00 79.47 1SG 849 ATOM 849 CD ARG 111 21.449 82.216 5.543 1.00 79.47 1SG 850 ATOM 850 NE ARG 111 22.832 82.734 5.346 1.00 79.47 1SG 851 ATOM 851 CZ ARG 111 23.358 82.839 4.091 1.00 79.47 1SG 852 ATOM 852 NH1 ARG 111 22.625 82.453 3.006 1.00 79.47 1SG 853 ATOM 853 NH2 ARG 111 24.625 83.319 3.922 1.00 79.47 1SG 854 ATOM 854 C ARG 111 19.537 86.196 5.805 1.00 79.47 1SG 855 ATOM 855 O ARG 111 20.233 87.157 5.479 1.00 79.47 1SG 856 ATOM 856 N ASN 112 19.168 85.959 7.081 1.00 57.05 1SG 857 ATOM 857 CA ASN 112 19.634 86.769 8.168 1.00 57.05 1SG 858 ATOM 858 CB ASN 112 18.518 87.596 8.833 1.00 57.05 1SG 859 ATOM 859 CG ASN 112 19.162 88.706 9.651 1.00 57.05 1SG 860 ATOM 860 OD1 ASN 112 20.183 88.506 10.308 1.00 57.05 1SG 861 ATOM 861 ND2 ASN 112 18.553 89.922 9.604 1.00 57.05 1SG 862 ATOM 862 C ASN 112 20.184 85.824 9.190 1.00 57.05 1SG 863 ATOM 863 O ASN 112 19.456 85.030 9.787 1.00 57.05 1SG 864 ATOM 864 N GLU 113 21.506 85.905 9.424 1.00103.00 1SG 865 ATOM 865 CA GLU 113 22.189 85.004 10.304 1.00103.00 1SG 866 ATOM 866 CB GLU 113 23.709 85.238 10.309 1.00103.00 1SG 867 ATOM 867 CG GLU 113 24.503 84.114 10.975 1.00103.00 1SG 868 ATOM 868 CD GLU 113 24.571 82.958 9.988 1.00103.00 1SG 869 ATOM 869 OE1 GLU 113 25.068 83.182 8.852 1.00103.00 1SG 870 ATOM 870 OE2 GLU 113 24.125 81.839 10.353 1.00103.00 1SG 871 ATOM 871 C GLU 113 21.711 85.187 11.709 1.00103.00 1SG 872 ATOM 872 O GLU 113 21.558 84.218 12.452 1.00103.00 1SG 873 ATOM 873 N GLU 114 21.477 86.447 12.117 1.00 86.99 1SG 874 ATOM 874 CA GLU 114 21.098 86.721 13.472 1.00 86.99 1SG 875 ATOM 875 CB GLU 114 21.087 88.221 13.821 1.00 86.99 1SG 876 ATOM 876 CG GLU 114 20.110 89.059 12.998 1.00 86.99 1SG 877 ATOM 877 CD GLU 114 20.171 90.483 13.532 1.00 86.99 1SG 878 ATOM 878 OE1 GLU 114 19.403 90.791 14.482 1.00 86.99 1SG 879 ATOM 879 OE2 GLU 114 20.992 91.280 13.004 1.00 86.99 1SG 880 ATOM 880 C GLU 114 19.740 86.169 13.778 1.00 86.99 1SG 881 ATOM 881 O GLU 114 19.514 85.669 14.879 1.00 86.99 1SG 882 ATOM 882 N ASN 115 18.801 86.232 12.814 1.00 44.16 1SG 883 ATOM 883 CA ASN 115 17.452 85.830 13.092 1.00 44.16 1SG 884 ATOM 884 CB ASN 115 16.466 86.167 11.962 1.00 44.16 1SG 885 ATOM 885 CG ASN 115 16.338 87.684 11.921 1.00 44.16 1SG 886 ATOM 886 OD1 ASN 115 16.856 88.382 12.790 1.00 44.16 1SG 887 ATOM 887 ND2 ASN 115 15.620 88.211 10.894 1.00 44.16 1SG 888 ATOM 888 C ASN 115 17.389 84.360 13.360 1.00 44.16 1SG 889 ATOM 889 O ASN 115 18.127 83.562 12.787 1.00 44.16 1SG 890 ATOM 890 N ALA 116 16.493 83.989 14.295 1.00 49.09 1SG 891 ATOM 891 CA ALA 116 16.284 82.639 14.729 1.00 49.09 1SG 892 ATOM 892 CB ALA 116 15.336 82.548 15.936 1.00 49.09 1SG 893 ATOM 893 C ALA 116 15.694 81.816 13.629 1.00 49.09 1SG 894 ATOM 894 O ALA 116 15.996 80.631 13.504 1.00 49.09 1SG 895 ATOM 895 N CYS 117 14.815 82.435 12.820 1.00128.02 1SG 896 ATOM 896 CA CYS 117 14.030 81.751 11.840 1.00128.02 1SG 897 ATOM 897 CB CYS 117 12.600 81.868 12.357 1.00128.02 1SG 898 ATOM 898 SG CYS 117 11.352 81.107 11.343 1.00128.02 1SG 899 ATOM 899 C CYS 117 14.194 82.481 10.528 1.00128.02 1SG 900 ATOM 900 O CYS 117 14.307 83.701 10.537 1.00128.02 1SG 901 ATOM 901 N HIS 118 14.179 81.768 9.368 1.00 90.93 1SG 902 ATOM 902 CA HIS 118 14.505 82.398 8.105 1.00 90.93 1SG 903 ATOM 903 ND1 HIS 118 17.365 81.287 9.225 1.00 90.93 1SG 904 ATOM 904 CG HIS 118 16.985 81.931 8.069 1.00 90.93 1SG 905 ATOM 905 CB HIS 118 15.672 81.714 7.373 1.00 90.93 1SG 906 ATOM 906 NE2 HIS 118 19.039 82.644 8.675 1.00 90.93 1SG 907 ATOM 907 CD2 HIS 118 18.018 82.755 7.747 1.00 90.93 1SG 908 ATOM 908 CE1 HIS 118 18.600 81.751 9.544 1.00 90.93 1SG 909 ATOM 909 C HIS 118 13.340 82.479 7.145 1.00 90.93 1SG 910 ATOM 910 O HIS 118 12.403 81.686 7.178 1.00 90.93 1SG 911 ATOM 911 N CYS 119 13.310 83.606 6.400 1.00136.32 1SG 912 ATOM 912 CA CYS 119 12.422 83.998 5.324 1.00136.32 1SG 913 ATOM 913 CB CYS 119 12.021 85.475 5.396 1.00136.32 1SG 914 ATOM 914 SG CYS 119 10.894 85.727 6.790 1.00136.32 1SG 915 ATOM 915 C CYS 119 12.862 83.722 3.906 1.00136.32 1SG 916 ATOM 916 O CYS 119 12.081 83.960 2.984 1.00136.32 1SG 917 ATOM 917 N SER 120 14.134 83.343 3.667 1.00 67.61 1SG 918 ATOM 918 CA SER 120 14.663 83.271 2.323 1.00 67.61 1SG 919 ATOM 919 CB SER 120 16.176 83.005 2.277 1.00 67.61 1SG 920 ATOM 920 OG SER 120 16.460 81.716 2.802 1.00 67.61 1SG 921 ATOM 921 C SER 120 14.000 82.211 1.494 1.00 67.61 1SG 922 ATOM 922 O SER 120 13.289 81.340 1.988 1.00 67.61 1SG 923 ATOM 923 N GLU 121 14.251 82.285 0.171 1.00 56.96 1SG 924 ATOM 924 CA GLU 121 13.655 81.449 -0.831 1.00 56.96 1SG 925 ATOM 925 CB GLU 121 14.067 81.847 -2.259 1.00 56.96 1SG 926 ATOM 926 CG GLU 121 13.529 83.213 -2.692 1.00 56.96 1SG 927 ATOM 927 CD GLU 121 14.010 83.482 -4.111 1.00 56.96 1SG 928 ATOM 928 OE1 GLU 121 14.874 82.708 -4.602 1.00 56.96 1SG 929 ATOM 929 OE2 GLU 121 13.521 84.470 -4.724 1.00 56.96 1SG 930 ATOM 930 C GLU 121 14.022 80.007 -0.643 1.00 56.96 1SG 931 ATOM 931 O GLU 121 13.188 79.137 -0.894 1.00 56.96 1SG 932 ATOM 932 N ASP 122 15.268 79.693 -0.228 1.00153.78 1SG 933 ATOM 933 CA ASP 122 15.621 78.299 -0.121 1.00153.78 1SG 934 ATOM 934 CB ASP 122 16.984 77.971 -0.756 1.00153.78 1SG 935 ATOM 935 CG ASP 122 18.062 78.720 0.010 1.00153.78 1SG 936 ATOM 936 OD1 ASP 122 17.836 79.916 0.335 1.00153.78 1SG 937 ATOM 937 OD2 ASP 122 19.130 78.107 0.276 1.00153.78 1SG 938 ATOM 938 C ASP 122 15.698 77.898 1.319 1.00153.78 1SG 939 ATOM 939 O ASP 122 16.490 77.044 1.714 1.00153.78 1SG 940 ATOM 940 N CYS 123 14.819 78.492 2.127 1.00106.59 1SG 941 ATOM 941 CA CYS 123 14.695 78.292 3.534 1.00106.59 1SG 942 ATOM 942 CB CYS 123 13.684 79.323 4.040 1.00106.59 1SG 943 ATOM 943 SG CYS 123 12.969 78.949 5.638 1.00106.59 1SG 944 ATOM 944 C CYS 123 14.252 76.888 3.824 1.00106.59 1SG 945 ATOM 945 O CYS 123 14.672 76.285 4.812 1.00106.59 1SG 946 ATOM 946 N LEU 124 13.394 76.324 2.955 1.00 77.32 1SG 947 ATOM 947 CA LEU 124 12.848 75.012 3.162 1.00 77.32 1SG 948 ATOM 948 CB LEU 124 11.844 74.611 2.069 1.00 77.32 1SG 949 ATOM 949 CG LEU 124 10.598 75.515 2.015 1.00 77.32 1SG 950 ATOM 950 CD1 LEU 124 9.778 75.415 3.311 1.00 77.32 1SG 951 ATOM 951 CD2 LEU 124 10.968 76.961 1.648 1.00 77.32 1SG 952 ATOM 952 C LEU 124 13.952 74.000 3.153 1.00 77.32 1SG 953 ATOM 953 O LEU 124 13.944 73.056 3.942 1.00 77.32 1SG 954 ATOM 954 N SER 125 14.941 74.162 2.256 1.00 24.27 1SG 955 ATOM 955 CA SER 125 15.995 73.190 2.195 1.00 24.27 1SG 956 ATOM 956 CB SER 125 17.054 73.524 1.131 1.00 24.27 1SG 957 ATOM 957 OG SER 125 16.476 73.482 -0.166 1.00 24.27 1SG 958 ATOM 958 C SER 125 16.677 73.179 3.524 1.00 24.27 1SG 959 ATOM 959 O SER 125 17.059 72.125 4.031 1.00 24.27 1SG 960 ATOM 960 N ARG 126 16.845 74.379 4.108 1.00126.60 1SG 961 ATOM 961 CA ARG 126 17.477 74.592 5.377 1.00126.60 1SG 962 ATOM 962 CB ARG 126 17.712 76.083 5.676 1.00126.60 1SG 963 ATOM 963 CG ARG 126 18.688 76.753 4.705 1.00126.60 1SG 964 ATOM 964 CD ARG 126 20.160 76.572 5.083 1.00126.60 1SG 965 ATOM 965 NE ARG 126 20.392 77.314 6.355 1.00126.60 1SG 966 ATOM 966 CZ ARG 126 21.648 77.379 6.887 1.00126.60 1SG 967 ATOM 967 NH1 ARG 126 22.690 76.769 6.251 1.00126.60 1SG 968 ATOM 968 NH2 ARG 126 21.860 78.055 8.053 1.00126.60 1SG 969 ATOM 969 C ARG 126 16.617 74.035 6.471 1.00126.60 1SG 970 ATOM 970 O ARG 126 17.120 73.627 7.513 1.00126.60 1SG 971 ATOM 971 N GLY 127 15.284 74.047 6.294 1.00 35.58 1SG 972 ATOM 972 CA GLY 127 14.435 73.525 7.327 1.00 35.58 1SG 973 ATOM 973 C GLY 127 14.376 74.536 8.428 1.00 35.58 1SG 974 ATOM 974 O GLY 127 14.167 74.185 9.588 1.00 35.58 1SG 975 ATOM 975 N ASP 128 14.576 75.826 8.090 1.00159.80 1SG 976 ATOM 976 CA ASP 128 14.564 76.844 9.103 1.00159.80 1SG 977 ATOM 977 CB ASP 128 15.917 77.567 9.212 1.00159.80 1SG 978 ATOM 978 CG ASP 128 16.224 78.236 7.877 1.00159.80 1SG 979 ATOM 979 OD1 ASP 128 15.490 77.968 6.888 1.00159.80 1SG 980 ATOM 980 OD2 ASP 128 17.204 79.026 7.829 1.00159.80 1SG 981 ATOM 981 C ASP 128 13.523 77.880 8.798 1.00159.80 1SG 982 ATOM 982 O ASP 128 13.648 79.031 9.216 1.00159.80 1SG 983 ATOM 983 N CYS 129 12.443 77.493 8.099 1.00 76.65 1SG 984 ATOM 984 CA CYS 129 11.423 78.436 7.739 1.00 76.65 1SG 985 ATOM 985 CB CYS 129 10.471 77.907 6.654 1.00 76.65 1SG 986 ATOM 986 SG CYS 129 11.381 77.817 5.108 1.00 76.65 1SG 987 ATOM 987 C CYS 129 10.576 78.742 8.917 1.00 76.65 1SG 988 ATOM 988 O CYS 129 10.327 77.890 9.769 1.00 76.65 1SG 989 ATOM 989 N CYS 130 10.117 80.005 8.982 1.00 85.93 1SG 990 ATOM 990 CA CYS 130 9.183 80.405 9.985 1.00 85.93 1SG 991 ATOM 991 CB CYS 130 8.927 81.918 9.992 1.00 85.93 1SG 992 ATOM 992 SG CYS 130 10.428 82.727 10.558 1.00 85.93 1SG 993 ATOM 993 C CYS 130 7.909 79.744 9.586 1.00 85.93 1SG 994 ATOM 994 O CYS 130 7.681 79.509 8.402 1.00 85.93 1SG 995 ATOM 995 N THR 131 7.041 79.432 10.561 1.00115.59 1SG 996 ATOM 996 CA THR 131 5.829 78.727 10.261 1.00115.59 1SG 997 ATOM 997 CB THR 131 5.014 78.429 11.486 1.00115.59 1SG 998 ATOM 998 OG1 THR 131 4.631 79.636 12.127 1.00115.59 1SG 999 ATOM 999 CG2 THR 131 5.852 77.561 12.440 1.00115.59 1SG1000 ATOM 1000 C THR 131 4.981 79.554 9.341 1.00115.59 1SG1001 ATOM 1001 O THR 131 4.337 79.027 8.436 1.00115.59 1SG1002 ATOM 1002 N ASN 132 4.954 80.877 9.574 1.00 94.53 1SG1003 ATOM 1003 CA ASN 132 4.153 81.818 8.839 1.00 94.53 1SG1004 ATOM 1004 CB ASN 132 3.971 83.168 9.545 1.00 94.53 1SG1005 ATOM 1005 CG ASN 132 5.289 83.899 9.475 1.00 94.53 1SG1006 ATOM 1006 OD1 ASN 132 6.177 83.775 10.317 1.00 94.53 1SG1007 ATOM 1007 ND2 ASN 132 5.424 84.684 8.378 1.00 94.53 1SG1008 ATOM 1008 C ASN 132 4.725 82.062 7.470 1.00 94.53 1SG1009 ATOM 1009 O ASN 132 4.102 82.725 6.642 1.00 94.53 1SG1010 ATOM 1010 N TYR 133 5.945 81.566 7.203 1.00 87.35 1SG1011 ATOM 1011 CA TYR 133 6.657 81.849 5.986 1.00 87.35 1SG1012 ATOM 1012 CB TYR 133 7.915 80.961 5.899 1.00 87.35 1SG1013 ATOM 1013 CG TYR 133 8.561 81.063 4.563 1.00 87.35 1SG1014 ATOM 1014 CD1 TYR 133 9.432 82.084 4.271 1.00 87.35 1SG1015 ATOM 1015 CD2 TYR 133 8.301 80.110 3.605 1.00 87.35 1SG1016 ATOM 1016 CE1 TYR 133 10.024 82.153 3.032 1.00 87.35 1SG1017 ATOM 1017 CE2 TYR 133 8.892 80.176 2.366 1.00 87.35 1SG1018 ATOM 1018 CZ TYR 133 9.758 81.202 2.077 1.00 87.35 1SG1019 ATOM 1019 OH TYR 133 10.370 81.279 0.808 1.00 87.35 1SG1020 ATOM 1020 C TYR 133 5.802 81.574 4.779 1.00 87.35 1SG1021 ATOM 1021 O TYR 133 5.739 82.403 3.872 1.00 87.35 1SG1022 ATOM 1022 N GLN 134 5.095 80.431 4.725 1.00 89.92 1SG1023 ATOM 1023 CA GLN 134 4.375 80.128 3.520 1.00 89.92 1SG1024 ATOM 1024 CB GLN 134 3.686 78.754 3.571 1.00 89.92 1SG1025 ATOM 1025 CG GLN 134 2.962 78.391 2.273 1.00 89.92 1SG1026 ATOM 1026 CD GLN 134 2.330 77.019 2.459 1.00 89.92 1SG1027 ATOM 1027 OE1 GLN 134 1.763 76.453 1.526 1.00 89.92 1SG1028 ATOM 1028 NE2 GLN 134 2.437 76.464 3.696 1.00 89.92 1SG1029 ATOM 1029 C GLN 134 3.323 81.161 3.251 1.00 89.92 1SG1030 ATOM 1030 O GLN 134 3.212 81.656 2.130 1.00 89.92 1SG1031 ATOM 1031 N VAL 135 2.531 81.534 4.272 1.00 31.46 1SG1032 ATOM 1032 CA VAL 135 1.472 82.467 4.030 1.00 31.46 1SG1033 ATOM 1033 CB VAL 135 0.619 82.699 5.242 1.00 31.46 1SG1034 ATOM 1034 CG1 VAL 135 -0.425 83.777 4.904 1.00 31.46 1SG1035 ATOM 1035 CG2 VAL 135 0.013 81.355 5.681 1.00 31.46 1SG1036 ATOM 1036 C VAL 135 2.040 83.790 3.625 1.00 31.46 1SG1037 ATOM 1037 O VAL 135 1.630 84.369 2.621 1.00 31.46 1SG1038 ATOM 1038 N VAL 136 3.017 84.299 4.397 1.00 36.35 1SG1039 ATOM 1039 CA VAL 136 3.547 85.605 4.132 1.00 36.35 1SG1040 ATOM 1040 CB VAL 136 4.530 86.045 5.173 1.00 36.35 1SG1041 ATOM 1041 CG1 VAL 136 5.151 87.382 4.735 1.00 36.35 1SG1042 ATOM 1042 CG2 VAL 136 3.786 86.119 6.517 1.00 36.35 1SG1043 ATOM 1043 C VAL 136 4.231 85.632 2.805 1.00 36.35 1SG1044 ATOM 1044 O VAL 136 3.966 86.514 1.988 1.00 36.35 1SG1045 ATOM 1045 N CYS 137 5.118 84.657 2.534 1.00 89.68 1SG1046 ATOM 1046 CA CYS 137 5.800 84.707 1.274 1.00 89.68 1SG1047 ATOM 1047 CB CYS 137 7.132 83.935 1.243 1.00 89.68 1SG1048 ATOM 1048 SG CYS 137 8.462 84.844 2.082 1.00 89.68 1SG1049 ATOM 1049 C CYS 137 4.897 84.119 0.245 1.00 89.68 1SG1050 ATOM 1050 O CYS 137 5.053 82.971 -0.167 1.00 89.68 1SG1051 ATOM 1051 N LYS 138 3.912 84.921 -0.200 1.00252.90 1SG1052 ATOM 1052 CA LYS 138 3.006 84.492 -1.220 1.00252.90 1SG1053 ATOM 1053 CB LYS 138 1.601 84.160 -0.686 1.00252.90 1SG1054 ATOM 1054 CG LYS 138 0.666 83.542 -1.727 1.00252.90 1SG1055 ATOM 1055 CD LYS 138 -0.585 82.912 -1.110 1.00252.90 1SG1056 ATOM 1056 CE LYS 138 -1.537 82.295 -2.136 1.00252.90 1SG1057 ATOM 1057 NZ LYS 138 -2.711 81.712 -1.448 1.00252.90 1SG1058 ATOM 1058 C LYS 138 2.881 85.654 -2.143 1.00252.90 1SG1059 ATOM 1059 O LYS 138 3.024 86.800 -1.720 1.00252.90 1SG1060 ATOM 1060 N GLY 139 2.636 85.406 -3.443 1.00150.88 1SG1061 ATOM 1061 CA GLY 139 2.527 86.551 -4.291 1.00150.88 1SG1062 ATOM 1062 C GLY 139 1.496 86.290 -5.336 1.00150.88 1SG1063 ATOM 1063 O GLY 139 1.706 85.509 -6.262 1.00150.88 1SG1064 ATOM 1064 N GLU 140 0.338 86.958 -5.192 1.00331.96 1SG1065 ATOM 1065 CA GLU 140 -0.702 86.892 -6.171 1.00331.96 1SG1066 ATOM 1066 CB GLU 140 -1.343 85.504 -6.342 1.00331.96 1SG1067 ATOM 1067 CG GLU 140 -2.040 84.972 -5.090 1.00331.96 1SG1068 ATOM 1068 CD GLU 140 -2.640 83.619 -5.446 1.00331.96 1SG1069 ATOM 1069 OE1 GLU 140 -2.485 83.198 -6.625 1.00331.96 1SG1070 ATOM 1070 OE2 GLU 140 -3.264 82.990 -4.551 1.00331.96 1SG1071 ATOM 1071 C GLU 140 -1.763 87.827 -5.704 1.00331.96 1SG1072 ATOM 1072 O GLU 140 -1.997 87.959 -4.504 1.00331.96 1SG1073 ATOM 1073 N SER 141 -2.425 88.523 -6.644 1.00186.49 1SG1074 ATOM 1074 CA SER 141 -3.457 89.422 -6.227 1.00186.49 1SG1075 ATOM 1075 CB SER 141 -2.975 90.871 -6.039 1.00186.49 1SG1076 ATOM 1076 OG SER 141 -2.549 91.410 -7.281 1.00186.49 1SG1077 ATOM 1077 C SER 141 -4.498 89.439 -7.293 1.00186.49 1SG1078 ATOM 1078 O SER 141 -4.229 89.111 -8.448 1.00186.49 1SG1079 TER END ########################## # # # ACE results: # # # ########################## # WARNING! TARGET 6318 atoms, MODEL 7140 atoms, 6318 common with TARGET Number of atoms possible to evaluate: 324 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 59.68 73.2 82 5.2 1563 ARMSMC SECONDARY STRUCTURE . . 50.65 83.3 12 2.2 534 ARMSMC SURFACE . . . . . . . . 72.00 58.1 43 6.3 680 ARMSMC BURIED . . . . . . . . 42.11 89.7 39 4.4 883 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.86 63.2 38 5.7 670 ARMSSC1 RELIABLE SIDE CHAINS . 71.15 62.9 35 5.6 624 ARMSSC1 SECONDARY STRUCTURE . . 64.55 66.7 6 2.6 233 ARMSSC1 SURFACE . . . . . . . . 78.97 60.0 20 6.8 296 ARMSSC1 BURIED . . . . . . . . 63.04 66.7 18 4.8 374 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.48 54.5 22 5.0 444 ARMSSC2 RELIABLE SIDE CHAINS . 69.09 64.7 17 5.0 343 ARMSSC2 SECONDARY STRUCTURE . . 82.91 66.7 3 1.9 159 ARMSSC2 SURFACE . . . . . . . . 84.99 41.7 12 5.9 203 ARMSSC2 BURIED . . . . . . . . 64.81 70.0 10 4.1 241 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.65 8.3 12 8.7 138 ARMSSC3 RELIABLE SIDE CHAINS . 85.36 9.1 11 9.6 115 ARMSSC3 SECONDARY STRUCTURE . . 43.74 50.0 2 3.8 52 ARMSSC3 SURFACE . . . . . . . . 69.28 12.5 8 10.8 74 ARMSSC3 BURIED . . . . . . . . 106.74 0.0 4 6.2 64 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 53.27 60.0 5 10.2 49 ARMSSC4 RELIABLE SIDE CHAINS . 53.27 60.0 5 10.2 49 ARMSSC4 SECONDARY STRUCTURE . . 22.08 100.0 1 5.9 17 ARMSSC4 SURFACE . . . . . . . . 51.10 66.7 3 10.3 29 ARMSSC4 BURIED . . . . . . . . 56.37 50.0 2 10.0 20 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.77 (Number of atoms: 42) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.77 42 5.4 784 CRMSCA CRN = ALL/NP . . . . . 0.0661 CRMSCA SECONDARY STRUCTURE . . 1.82 6 2.2 268 CRMSCA SURFACE . . . . . . . . 3.58 22 6.5 341 CRMSCA BURIED . . . . . . . . 1.45 20 4.5 443 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.98 207 5.3 3872 CRMSMC SECONDARY STRUCTURE . . 2.12 30 2.3 1331 CRMSMC SURFACE . . . . . . . . 3.86 108 6.4 1686 CRMSMC BURIED . . . . . . . . 1.53 99 4.5 2186 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.15 156 4.9 3182 CRMSSC RELIABLE SIDE CHAINS . 4.30 136 5.0 2746 CRMSSC SECONDARY STRUCTURE . . 4.38 26 2.3 1125 CRMSSC SURFACE . . . . . . . . 5.28 78 5.7 1379 CRMSSC BURIED . . . . . . . . 2.56 78 4.3 1803 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.57 324 5.1 6318 CRMSALL SECONDARY STRUCTURE . . 3.47 50 2.3 2197 CRMSALL SURFACE . . . . . . . . 4.54 166 6.1 2743 CRMSALL BURIED . . . . . . . . 2.10 158 4.4 3575 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 105.777 0.956 0.957 42 5.4 784 ERRCA SECONDARY STRUCTURE . . 96.168 0.947 0.949 6 2.2 268 ERRCA SURFACE . . . . . . . . 115.660 0.947 0.948 22 6.5 341 ERRCA BURIED . . . . . . . . 94.905 0.967 0.968 20 4.5 443 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 106.092 0.955 0.957 207 5.3 3872 ERRMC SECONDARY STRUCTURE . . 95.951 0.943 0.945 30 2.3 1331 ERRMC SURFACE . . . . . . . . 115.853 0.946 0.948 108 6.4 1686 ERRMC BURIED . . . . . . . . 95.444 0.966 0.967 99 4.5 2186 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 111.685 0.944 0.947 156 4.9 3182 ERRSC RELIABLE SIDE CHAINS . 117.466 0.946 0.948 136 5.0 2746 ERRSC SECONDARY STRUCTURE . . 104.268 0.942 0.944 26 2.3 1125 ERRSC SURFACE . . . . . . . . 123.999 0.933 0.936 78 5.7 1379 ERRSC BURIED . . . . . . . . 99.371 0.956 0.957 78 4.3 1803 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 108.601 0.950 0.952 324 5.1 6318 ERRALL SECONDARY STRUCTURE . . 100.292 0.942 0.944 50 2.3 2197 ERRALL SURFACE . . . . . . . . 119.573 0.940 0.943 166 6.1 2743 ERRALL BURIED . . . . . . . . 97.072 0.961 0.962 158 4.4 3575 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 28 38 40 41 42 784 DISTCA CA (P) 0.51 3.57 4.85 5.10 5.23 784 DISTCA CA (RMS) 0.75 1.37 1.73 1.90 2.20 DISTCA ALL (N) 38 180 251 291 313 324 6318 DISTALL ALL (P) 0.60 2.85 3.97 4.61 4.95 6318 DISTALL ALL (RMS) 0.80 1.40 1.75 2.15 2.75 DISTALL END of the results output