####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS457_1_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS457_1_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 3.04 3.04 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 99 - 139 1.95 3.30 LCS_AVERAGE: 84.84 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 118 - 132 0.99 3.63 LONGEST_CONTINUOUS_SEGMENT: 15 119 - 133 0.97 3.51 LCS_AVERAGE: 24.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 45 3 3 3 3 3 4 10 16 18 34 41 42 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 5 45 3 3 3 4 4 5 10 16 18 29 41 41 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 5 45 3 3 3 4 4 6 10 20 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 12 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 12 41 45 5 10 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 12 41 45 5 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 12 41 45 5 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 12 41 45 5 10 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 12 41 45 5 15 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 12 41 45 4 10 19 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 12 41 45 3 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 12 41 45 3 10 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 12 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 12 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 12 41 45 6 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 5 41 45 4 5 8 19 27 35 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 5 41 45 4 14 23 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 6 41 45 4 5 16 23 33 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 6 41 45 3 7 22 30 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 6 41 45 3 12 23 31 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 6 41 45 3 14 23 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 6 41 45 3 14 23 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 15 41 45 3 8 19 31 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 15 41 45 3 14 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 15 41 45 5 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 15 41 45 4 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 15 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 15 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 15 41 45 4 14 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 15 41 45 6 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 15 41 45 5 15 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 15 41 45 5 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 15 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 15 41 45 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 15 41 45 6 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 15 41 45 5 10 23 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 15 41 45 6 14 23 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 15 41 45 5 12 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 13 41 45 5 9 18 29 35 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 13 41 45 5 15 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 10 41 45 4 8 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 10 41 45 4 8 17 28 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 4 41 45 4 10 14 25 33 36 40 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 4 41 45 4 4 14 15 29 32 37 41 41 42 43 43 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 4 24 45 4 4 5 6 6 9 32 38 41 42 43 43 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 69.70 ( 24.25 84.84 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 16 24 32 36 38 40 41 41 42 43 43 45 45 45 45 45 45 45 45 GDT PERCENT_AT 15.56 35.56 53.33 71.11 80.00 84.44 88.89 91.11 91.11 93.33 95.56 95.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.73 1.00 1.27 1.46 1.60 1.79 1.95 1.95 2.17 2.45 2.45 3.04 3.04 3.04 3.04 3.04 3.04 3.04 3.04 GDT RMS_ALL_AT 3.12 3.23 3.32 3.39 3.35 3.38 3.33 3.30 3.30 3.26 3.15 3.15 3.04 3.04 3.04 3.04 3.04 3.04 3.04 3.04 # Checking swapping # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 10.469 0 0.683 0.899 11.669 0.833 0.884 LGA A 97 A 97 10.591 0 0.160 0.205 12.234 0.238 0.190 LGA R 98 R 98 8.176 0 0.518 1.355 18.085 15.000 5.498 LGA G 99 G 99 1.117 0 0.658 0.658 3.814 76.429 76.429 LGA W 100 W 100 1.719 0 0.206 0.935 4.895 79.286 52.993 LGA E 101 E 101 1.143 0 0.008 0.099 2.141 79.286 76.720 LGA C 102 C 102 1.305 0 0.165 0.231 2.419 75.119 77.222 LGA T 103 T 103 1.518 0 0.089 0.164 2.478 72.976 70.612 LGA K 104 K 104 1.455 0 0.039 1.350 4.771 75.119 72.222 LGA D 105 D 105 2.553 0 0.075 0.960 6.501 60.952 47.143 LGA R 106 R 106 0.936 0 0.122 0.621 2.608 83.690 80.216 LGA C 107 C 107 1.868 0 0.525 0.553 4.378 61.905 65.635 LGA G 108 G 108 0.621 0 0.278 0.278 1.685 86.071 86.071 LGA E 109 E 109 0.415 0 0.202 0.967 1.664 88.452 85.608 LGA V 110 V 110 0.808 0 0.624 1.402 4.855 84.048 72.177 LGA R 111 R 111 3.725 0 0.233 1.175 14.205 47.262 19.091 LGA N 112 N 112 1.742 0 0.079 0.690 7.624 81.548 55.833 LGA E 113 E 113 3.669 0 0.149 0.944 10.562 51.905 27.090 LGA E 114 E 114 2.665 0 0.156 0.284 6.102 60.952 43.228 LGA N 115 N 115 2.057 0 0.076 0.147 2.380 68.810 70.893 LGA A 116 A 116 1.727 0 0.056 0.067 2.859 84.048 78.667 LGA C 117 C 117 1.991 0 0.028 0.147 4.475 72.976 63.175 LGA H 118 H 118 2.514 0 0.113 1.395 8.023 69.048 43.000 LGA C 119 C 119 1.438 0 0.335 0.319 3.640 81.548 71.111 LGA S 120 S 120 0.894 0 0.167 0.705 4.380 95.238 81.825 LGA E 121 E 121 0.797 0 0.136 1.439 5.762 88.214 65.767 LGA D 122 D 122 0.449 0 0.161 1.086 3.582 97.619 82.738 LGA C 123 C 123 0.564 0 0.044 0.105 1.048 90.595 90.556 LGA L 124 L 124 1.448 0 0.034 1.426 5.084 81.548 72.560 LGA S 125 S 125 1.104 0 0.205 0.705 3.173 79.286 74.762 LGA R 126 R 126 1.029 0 0.063 1.273 6.917 88.214 63.463 LGA G 127 G 127 0.843 0 0.235 0.235 1.559 86.071 86.071 LGA D 128 D 128 0.834 0 0.298 1.293 4.673 86.071 72.560 LGA C 129 C 129 0.906 0 0.149 0.186 1.367 85.952 87.460 LGA C 130 C 130 0.464 0 0.139 0.172 1.428 92.976 90.635 LGA T 131 T 131 1.737 0 0.129 1.112 3.291 75.000 68.503 LGA N 132 N 132 1.620 0 0.138 0.483 2.952 79.405 72.143 LGA Y 133 Y 133 1.555 0 0.046 0.460 4.805 77.262 55.040 LGA Q 134 Q 134 2.824 0 0.183 0.723 8.678 66.905 40.212 LGA V 135 V 135 1.264 0 0.141 0.968 3.905 79.286 70.068 LGA V 136 V 136 1.806 0 0.077 0.106 3.034 70.952 66.190 LGA C 137 C 137 2.909 0 0.039 0.086 6.699 67.024 53.095 LGA K 138 K 138 3.462 0 0.388 1.105 7.426 39.762 29.683 LGA G 139 G 139 5.012 0 0.367 0.367 5.486 30.476 30.476 LGA E 140 E 140 6.787 0 0.077 1.353 12.756 12.976 5.926 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 3.039 2.979 4.503 69.519 60.032 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 41 1.95 74.444 81.190 1.999 LGA_LOCAL RMSD: 1.951 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.302 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 3.039 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.994911 * X + 0.047633 * Y + 0.088787 * Z + -13.768650 Y_new = 0.100297 * X + 0.552351 * Y + 0.827556 * Z + 54.491604 Z_new = -0.009623 * X + 0.832250 * Y + -0.554317 * Z + 17.184650 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.041122 0.009623 2.158370 [DEG: 174.2435 0.5513 123.6655 ] ZXZ: 3.034713 2.158339 -0.011562 [DEG: 173.8762 123.6637 -0.6624 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS457_1_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS457_1_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 41 1.95 81.190 3.04 REMARK ---------------------------------------------------------- MOLECULE T0543TS457_1_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 1 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 2ys0_A ATOM 1426 N THR 96 8.628 80.407 26.075 1.00 0.50 N ATOM 1427 CA THR 96 8.043 80.172 24.760 1.00 0.50 C ATOM 1428 C THR 96 9.006 80.568 23.650 1.00 0.50 C ATOM 1429 O THR 96 10.098 81.073 23.912 1.00 0.50 O ATOM 1430 CB THR 96 6.721 80.954 24.591 1.00 0.50 C ATOM 1431 OG1 THR 96 6.095 80.542 23.370 1.00 0.50 O ATOM 1432 CG2 THR 96 6.974 82.455 24.543 1.00 0.50 C ATOM 1440 N ALA 97 8.597 80.336 22.408 1.00 0.50 N ATOM 1441 CA ALA 97 9.418 80.682 21.252 1.00 0.50 C ATOM 1442 C ALA 97 8.655 81.573 20.281 1.00 0.50 C ATOM 1443 O ALA 97 7.955 81.085 19.393 1.00 0.50 O ATOM 1444 CB ALA 97 9.886 79.417 20.540 1.00 0.50 C ATOM 1450 N ARG 98 8.791 82.883 20.457 1.00 0.50 N ATOM 1451 CA ARG 98 8.130 83.846 19.584 1.00 0.50 C ATOM 1452 C ARG 98 9.144 84.726 18.865 1.00 0.50 C ATOM 1453 O ARG 98 9.816 85.549 19.487 1.00 0.50 O ATOM 1454 CB ARG 98 7.163 84.721 20.387 1.00 0.50 C ATOM 1455 CG ARG 98 5.908 83.987 20.838 1.00 0.50 C ATOM 1456 CD ARG 98 5.032 84.868 21.718 1.00 0.50 C ATOM 1457 NE ARG 98 3.890 84.130 22.253 1.00 0.50 N ATOM 1458 CZ ARG 98 2.750 83.915 21.601 1.00 0.50 C ATOM 1459 NH1 ARG 98 2.636 84.207 20.308 1.00 0.50 H ATOM 1460 NH2 ARG 98 1.706 83.411 22.254 1.00 0.50 H ATOM 1474 N GLY 99 9.252 84.547 17.553 1.00 0.50 N ATOM 1475 CA GLY 99 10.146 85.361 16.739 1.00 0.50 C ATOM 1476 C GLY 99 10.400 84.714 15.384 1.00 0.50 C ATOM 1477 O GLY 99 11.116 85.265 14.547 1.00 0.50 O ATOM 1481 N TRP 100 9.811 83.542 15.173 1.00 0.50 N ATOM 1482 CA TRP 100 9.973 82.817 13.919 1.00 0.50 C ATOM 1483 C TRP 100 8.862 83.164 12.935 1.00 0.50 C ATOM 1484 O TRP 100 8.241 82.279 12.348 1.00 0.50 O ATOM 1485 CB TRP 100 9.990 81.305 14.174 1.00 0.50 C ATOM 1486 CG TRP 100 11.190 80.829 14.940 1.00 0.50 C ATOM 1487 CD1 TRP 100 12.231 81.593 15.390 1.00 0.50 C ATOM 1488 CD2 TRP 100 11.468 79.485 15.343 1.00 0.50 C ATOM 1489 NE1 TRP 100 13.142 80.802 16.049 1.00 0.50 N ATOM 1490 CE2 TRP 100 12.699 79.506 16.034 1.00 0.50 C ATOM 1491 CE3 TRP 100 10.797 78.266 15.185 1.00 0.50 C ATOM 1492 CZ2 TRP 100 13.274 78.350 16.570 1.00 0.50 C ATOM 1493 CZ3 TRP 100 11.370 77.116 15.718 1.00 0.50 C ATOM 1494 CH2 TRP 100 12.594 77.168 16.401 1.00 0.50 H ATOM 1505 N GLU 101 8.616 84.459 12.762 1.00 0.50 N ATOM 1506 CA GLU 101 7.580 84.926 11.849 1.00 0.50 C ATOM 1507 C GLU 101 8.186 85.538 10.593 1.00 0.50 C ATOM 1508 O GLU 101 9.177 86.267 10.663 1.00 0.50 O ATOM 1509 CB GLU 101 6.678 85.951 12.545 1.00 0.50 C ATOM 1510 CG GLU 101 5.858 85.370 13.690 1.00 0.50 C ATOM 1511 CD GLU 101 4.937 86.385 14.342 1.00 0.50 C ATOM 1512 OE1 GLU 101 4.919 87.559 13.915 1.00 0.50 O ATOM 1513 OE2 GLU 101 4.227 86.000 15.303 1.00 0.50 O ATOM 1520 N CYS 102 7.587 85.239 9.446 1.00 0.50 N ATOM 1521 CA CYS 102 8.068 85.760 8.172 1.00 0.50 C ATOM 1522 C CYS 102 7.174 86.884 7.664 1.00 0.50 C ATOM 1523 O CYS 102 6.013 86.660 7.323 1.00 0.50 O ATOM 1524 CB CYS 102 8.132 84.641 7.126 1.00 0.50 C ATOM 1525 SG CYS 102 9.645 83.648 7.218 1.00 0.50 S ATOM 1531 N THR 103 7.722 88.093 7.618 1.00 0.50 N ATOM 1532 CA THR 103 6.975 89.255 7.152 1.00 0.50 C ATOM 1533 C THR 103 6.969 89.332 5.631 1.00 0.50 C ATOM 1534 O THR 103 7.536 88.473 4.953 1.00 0.50 O ATOM 1535 CB THR 103 7.566 90.563 7.725 1.00 0.50 C ATOM 1536 OG1 THR 103 8.897 90.728 7.223 1.00 0.50 O ATOM 1537 CG2 THR 103 7.605 90.527 9.247 1.00 0.50 C ATOM 1545 N LYS 104 6.326 90.365 5.097 1.00 0.50 N ATOM 1546 CA LYS 104 6.245 90.555 3.654 1.00 0.50 C ATOM 1547 C LYS 104 7.624 90.795 3.053 1.00 0.50 C ATOM 1548 O LYS 104 7.990 90.183 2.049 1.00 0.50 O ATOM 1549 CB LYS 104 5.322 91.730 3.320 1.00 0.50 C ATOM 1550 CG LYS 104 4.841 91.741 1.876 1.00 0.50 C ATOM 1551 CD LYS 104 3.501 92.454 1.742 1.00 0.50 C ATOM 1552 CE LYS 104 2.332 91.491 1.908 1.00 0.50 C ATOM 1553 NZ LYS 104 2.114 91.128 3.337 1.00 0.50 N ATOM 1567 N ASP 105 8.386 91.691 3.670 1.00 0.50 N ATOM 1568 CA ASP 105 9.727 92.014 3.196 1.00 0.50 C ATOM 1569 C ASP 105 10.742 90.980 3.667 1.00 0.50 C ATOM 1570 O ASP 105 11.754 90.744 3.008 1.00 0.50 O ATOM 1571 CB ASP 105 10.140 93.409 3.675 1.00 0.50 C ATOM 1572 CG ASP 105 9.284 94.517 3.093 1.00 0.50 C ATOM 1573 OD1 ASP 105 9.157 94.608 1.854 1.00 0.50 O ATOM 1574 OD2 ASP 105 8.731 95.311 3.888 1.00 0.50 O ATOM 1579 N ARG 106 10.465 90.367 4.813 1.00 0.50 N ATOM 1580 CA ARG 106 11.352 89.354 5.374 1.00 0.50 C ATOM 1581 C ARG 106 11.537 88.189 4.412 1.00 0.50 C ATOM 1582 O ARG 106 12.589 87.552 4.388 1.00 0.50 O ATOM 1583 CB ARG 106 10.805 88.843 6.709 1.00 0.50 C ATOM 1584 CG ARG 106 10.737 89.911 7.792 1.00 0.50 C ATOM 1585 CD ARG 106 12.108 90.185 8.393 1.00 0.50 C ATOM 1586 NE ARG 106 12.571 89.067 9.211 1.00 0.50 N ATOM 1587 CZ ARG 106 12.074 88.735 10.399 1.00 0.50 C ATOM 1588 NH1 ARG 106 10.961 89.303 10.858 1.00 0.50 H ATOM 1589 NH2 ARG 106 12.704 87.831 11.146 1.00 0.50 H ATOM 1603 N CYS 107 10.504 87.912 3.623 1.00 0.50 N ATOM 1604 CA CYS 107 10.550 86.819 2.657 1.00 0.50 C ATOM 1605 C CYS 107 11.905 86.752 1.966 1.00 0.50 C ATOM 1606 O CYS 107 12.723 85.882 2.264 1.00 0.50 O ATOM 1607 CB CYS 107 9.444 86.985 1.608 1.00 0.50 C ATOM 1608 SG CYS 107 7.791 87.177 2.322 1.00 0.50 S ATOM 1614 N GLY 108 12.137 87.675 1.037 1.00 0.50 N ATOM 1615 CA GLY 108 13.394 87.721 0.300 1.00 0.50 C ATOM 1616 C GLY 108 14.573 87.953 1.236 1.00 0.50 C ATOM 1617 O GLY 108 15.571 87.234 1.183 1.00 0.50 O ATOM 1621 N GLU 109 14.454 88.963 2.091 1.00 0.50 N ATOM 1622 CA GLU 109 15.510 89.292 3.040 1.00 0.50 C ATOM 1623 C GLU 109 16.513 88.152 3.164 1.00 0.50 C ATOM 1624 O GLU 109 16.218 87.113 3.753 1.00 0.50 O ATOM 1625 CB GLU 109 14.913 89.610 4.414 1.00 0.50 C ATOM 1626 CG GLU 109 14.118 88.460 5.020 1.00 0.50 C ATOM 1627 CD GLU 109 14.969 87.514 5.849 1.00 0.50 C ATOM 1628 OE1 GLU 109 15.916 87.974 6.523 1.00 0.50 O ATOM 1629 OE2 GLU 109 14.688 86.291 5.817 1.00 0.50 O ATOM 1636 N VAL 110 17.701 88.354 2.604 1.00 0.50 N ATOM 1637 CA VAL 110 18.752 87.343 2.650 1.00 0.50 C ATOM 1638 C VAL 110 19.726 87.613 3.789 1.00 0.50 C ATOM 1639 O VAL 110 20.721 86.908 3.947 1.00 0.50 O ATOM 1640 CB VAL 110 19.528 87.280 1.316 1.00 0.50 C ATOM 1641 CG1 VAL 110 18.594 86.929 0.163 1.00 0.50 C ATOM 1642 CG2 VAL 110 20.226 88.609 1.043 1.00 0.50 C ATOM 1652 N ARG 111 19.432 88.639 4.581 1.00 0.50 N ATOM 1653 CA ARG 111 20.284 89.004 5.707 1.00 0.50 C ATOM 1654 C ARG 111 19.663 88.573 7.030 1.00 0.50 C ATOM 1655 O ARG 111 19.074 89.385 7.744 1.00 0.50 O ATOM 1656 CB ARG 111 20.535 90.515 5.720 1.00 0.50 C ATOM 1657 CG ARG 111 21.337 91.011 4.525 1.00 0.50 C ATOM 1658 CD ARG 111 20.432 91.365 3.354 1.00 0.50 C ATOM 1659 NE ARG 111 21.106 91.175 2.074 1.00 0.50 N ATOM 1660 CZ ARG 111 20.777 91.787 0.939 1.00 0.50 C ATOM 1661 NH1 ARG 111 19.898 92.787 0.932 1.00 0.50 H ATOM 1662 NH2 ARG 111 21.324 91.387 -0.206 1.00 0.50 H ATOM 1676 N ASN 112 19.795 87.290 7.349 1.00 0.50 N ATOM 1677 CA ASN 112 19.247 86.749 8.586 1.00 0.50 C ATOM 1678 C ASN 112 20.333 86.582 9.642 1.00 0.50 C ATOM 1679 O ASN 112 21.170 85.684 9.549 1.00 0.50 O ATOM 1680 CB ASN 112 18.554 85.407 8.322 1.00 0.50 C ATOM 1681 CG ASN 112 17.859 84.860 9.554 1.00 0.50 C ATOM 1682 OD1 ASN 112 18.193 85.228 10.685 1.00 0.50 O ATOM 1683 ND2 ASN 112 16.888 83.978 9.351 1.00 0.50 N ATOM 1690 N GLU 113 20.314 87.453 10.645 1.00 0.50 N ATOM 1691 CA GLU 113 21.296 87.405 11.721 1.00 0.50 C ATOM 1692 C GLU 113 20.719 86.743 12.966 1.00 0.50 C ATOM 1693 O GLU 113 21.341 85.861 13.558 1.00 0.50 O ATOM 1694 CB GLU 113 21.785 88.816 12.063 1.00 0.50 C ATOM 1695 CG GLU 113 22.552 89.490 10.932 1.00 0.50 C ATOM 1696 CD GLU 113 23.001 90.900 11.269 1.00 0.50 C ATOM 1697 OE1 GLU 113 22.762 91.364 12.405 1.00 0.50 O ATOM 1698 OE2 GLU 113 23.594 91.556 10.378 1.00 0.50 O ATOM 1705 N GLU 114 19.526 87.176 13.360 1.00 0.50 N ATOM 1706 CA GLU 114 18.862 86.627 14.536 1.00 0.50 C ATOM 1707 C GLU 114 17.541 85.967 14.165 1.00 0.50 C ATOM 1708 O GLU 114 17.170 84.937 14.730 1.00 0.50 O ATOM 1709 CB GLU 114 18.620 87.726 15.576 1.00 0.50 C ATOM 1710 CG GLU 114 19.900 88.302 16.168 1.00 0.50 C ATOM 1711 CD GLU 114 19.654 89.473 17.103 1.00 0.50 C ATOM 1712 OE1 GLU 114 18.489 89.900 17.255 1.00 0.50 O ATOM 1713 OE2 GLU 114 20.645 89.976 17.687 1.00 0.50 O ATOM 1720 N ASN 115 16.832 86.566 13.214 1.00 0.50 N ATOM 1721 CA ASN 115 15.550 86.036 12.766 1.00 0.50 C ATOM 1722 C ASN 115 15.414 84.558 13.109 1.00 0.50 C ATOM 1723 O ASN 115 16.308 83.761 12.825 1.00 0.50 O ATOM 1724 CB ASN 115 15.381 86.248 11.257 1.00 0.50 C ATOM 1725 CG ASN 115 15.159 87.705 10.896 1.00 0.50 C ATOM 1726 OD1 ASN 115 14.721 88.503 11.731 1.00 0.50 O ATOM 1727 ND2 ASN 115 15.457 88.065 9.655 1.00 0.50 N ATOM 1734 N ALA 116 14.291 84.198 13.721 1.00 0.50 N ATOM 1735 CA ALA 116 14.036 82.815 14.103 1.00 0.50 C ATOM 1736 C ALA 116 14.808 81.846 13.215 1.00 0.50 C ATOM 1737 O ALA 116 15.297 80.817 13.680 1.00 0.50 O ATOM 1738 CB ALA 116 12.542 82.514 14.028 1.00 0.50 C ATOM 1744 N CYS 117 14.911 82.181 11.933 1.00 0.50 N ATOM 1745 CA CYS 117 15.623 81.342 10.977 1.00 0.50 C ATOM 1746 C CYS 117 14.984 81.416 9.596 1.00 0.50 C ATOM 1747 O CYS 117 13.989 82.112 9.399 1.00 0.50 O ATOM 1748 CB CYS 117 15.645 79.887 11.456 1.00 0.50 C ATOM 1749 SG CYS 117 14.044 79.052 11.318 1.00 0.50 S ATOM 1755 N HIS 118 15.564 80.696 8.643 1.00 0.50 N ATOM 1756 CA HIS 118 15.053 80.679 7.277 1.00 0.50 C ATOM 1757 C HIS 118 14.018 81.776 7.063 1.00 0.50 C ATOM 1758 O HIS 118 13.083 81.923 7.851 1.00 0.50 O ATOM 1759 CB HIS 118 14.435 79.312 6.955 1.00 0.50 C ATOM 1760 CG HIS 118 13.213 79.011 7.767 1.00 0.50 C ATOM 1761 ND1 HIS 118 13.274 78.560 9.068 1.00 0.50 N ATOM 1762 CD2 HIS 118 11.896 79.103 7.451 1.00 0.50 C ATOM 1763 CE1 HIS 118 12.040 78.386 9.519 1.00 0.50 C ATOM 1764 NE2 HIS 118 11.187 78.709 8.560 1.00 0.50 N ATOM 1772 N CYS 119 14.191 82.546 5.994 1.00 0.50 N ATOM 1773 CA CYS 119 13.272 83.632 5.675 1.00 0.50 C ATOM 1774 C CYS 119 13.139 83.816 4.168 1.00 0.50 C ATOM 1775 O CYS 119 12.037 84.004 3.652 1.00 0.50 O ATOM 1776 CB CYS 119 13.750 84.941 6.313 1.00 0.50 C ATOM 1777 SG CYS 119 14.196 84.775 8.061 1.00 0.50 S ATOM 1783 N SER 120 14.267 83.763 3.468 1.00 0.50 N ATOM 1784 CA SER 120 14.278 83.925 2.020 1.00 0.50 C ATOM 1785 C SER 120 14.030 82.598 1.315 1.00 0.50 C ATOM 1786 O SER 120 13.427 81.686 1.881 1.00 0.50 O ATOM 1787 CB SER 120 15.614 84.514 1.560 1.00 0.50 C ATOM 1788 OG SER 120 15.682 84.547 0.144 1.00 0.50 O ATOM 1794 N GLU 121 14.496 82.496 0.075 1.00 0.50 N ATOM 1795 CA GLU 121 14.325 81.280 -0.711 1.00 0.50 C ATOM 1796 C GLU 121 15.038 80.101 -0.061 1.00 0.50 C ATOM 1797 O GLU 121 14.534 78.977 -0.068 1.00 0.50 O ATOM 1798 CB GLU 121 14.851 81.486 -2.135 1.00 0.50 C ATOM 1799 CG GLU 121 15.426 82.874 -2.383 1.00 0.50 C ATOM 1800 CD GLU 121 16.714 83.135 -1.623 1.00 0.50 C ATOM 1801 OE1 GLU 121 17.779 82.620 -2.029 1.00 0.50 O ATOM 1802 OE2 GLU 121 16.657 83.859 -0.600 1.00 0.50 O ATOM 1809 N ASP 122 16.214 80.362 0.499 1.00 0.50 N ATOM 1810 CA ASP 122 17.000 79.322 1.154 1.00 0.50 C ATOM 1811 C ASP 122 16.192 78.624 2.241 1.00 0.50 C ATOM 1812 O ASP 122 16.419 77.452 2.541 1.00 0.50 O ATOM 1813 CB ASP 122 18.279 79.917 1.752 1.00 0.50 C ATOM 1814 CG ASP 122 19.102 78.903 2.524 1.00 0.50 C ATOM 1815 OD1 ASP 122 18.987 77.688 2.258 1.00 0.50 O ATOM 1816 OD2 ASP 122 19.871 79.329 3.415 1.00 0.50 O ATOM 1821 N CYS 123 15.249 79.353 2.829 1.00 0.50 N ATOM 1822 CA CYS 123 14.404 78.804 3.884 1.00 0.50 C ATOM 1823 C CYS 123 13.686 77.546 3.416 1.00 0.50 C ATOM 1824 O CYS 123 13.583 76.567 4.157 1.00 0.50 O ATOM 1825 CB CYS 123 13.375 79.844 4.342 1.00 0.50 C ATOM 1826 SG CYS 123 11.890 79.897 3.308 1.00 0.50 S ATOM 1832 N LEU 124 13.188 77.577 2.185 1.00 0.50 N ATOM 1833 CA LEU 124 12.477 76.438 1.617 1.00 0.50 C ATOM 1834 C LEU 124 13.360 75.197 1.585 1.00 0.50 C ATOM 1835 O LEU 124 12.943 74.115 1.999 1.00 0.50 O ATOM 1836 CB LEU 124 11.996 76.768 0.199 1.00 0.50 C ATOM 1837 CG LEU 124 11.243 75.655 -0.536 1.00 0.50 C ATOM 1838 CD1 LEU 124 9.970 75.296 0.219 1.00 0.50 C ATOM 1839 CD2 LEU 124 10.914 76.095 -1.957 1.00 0.50 C ATOM 1851 N SER 125 14.583 75.360 1.089 1.00 0.50 N ATOM 1852 CA SER 125 15.527 74.253 1.001 1.00 0.50 C ATOM 1853 C SER 125 15.986 73.810 2.385 1.00 0.50 C ATOM 1854 O SER 125 15.898 72.632 2.731 1.00 0.50 O ATOM 1855 CB SER 125 16.739 74.651 0.157 1.00 0.50 C ATOM 1856 OG SER 125 16.360 74.852 -1.194 1.00 0.50 O ATOM 1862 N ARG 126 16.478 74.760 3.173 1.00 0.50 N ATOM 1863 CA ARG 126 16.951 74.470 4.521 1.00 0.50 C ATOM 1864 C ARG 126 15.830 73.918 5.391 1.00 0.50 C ATOM 1865 O ARG 126 16.082 73.266 6.404 1.00 0.50 O ATOM 1866 CB ARG 126 17.536 75.730 5.165 1.00 0.50 C ATOM 1867 CG ARG 126 18.156 75.484 6.534 1.00 0.50 C ATOM 1868 CD ARG 126 18.878 76.720 7.050 1.00 0.50 C ATOM 1869 NE ARG 126 19.467 76.490 8.366 1.00 0.50 N ATOM 1870 CZ ARG 126 20.060 77.422 9.109 1.00 0.50 C ATOM 1871 NH1 ARG 126 19.994 78.708 8.773 1.00 0.50 H ATOM 1872 NH2 ARG 126 20.739 77.062 10.196 1.00 0.50 H ATOM 1886 N GLY 127 14.591 74.186 4.992 1.00 0.50 N ATOM 1887 CA GLY 127 13.428 73.717 5.736 1.00 0.50 C ATOM 1888 C GLY 127 13.126 74.628 6.918 1.00 0.50 C ATOM 1889 O GLY 127 12.081 74.505 7.558 1.00 0.50 O ATOM 1893 N ASP 128 14.047 75.541 7.206 1.00 0.50 N ATOM 1894 CA ASP 128 13.881 76.474 8.314 1.00 0.50 C ATOM 1895 C ASP 128 13.119 77.718 7.877 1.00 0.50 C ATOM 1896 O ASP 128 13.710 78.778 7.664 1.00 0.50 O ATOM 1897 CB ASP 128 15.245 76.871 8.887 1.00 0.50 C ATOM 1898 CG ASP 128 16.026 75.692 9.438 1.00 0.50 C ATOM 1899 OD1 ASP 128 15.548 75.026 10.381 1.00 0.50 O ATOM 1900 OD2 ASP 128 17.135 75.431 8.921 1.00 0.50 O ATOM 1905 N CYS 129 11.804 77.583 7.743 1.00 0.50 N ATOM 1906 CA CYS 129 10.958 78.697 7.330 1.00 0.50 C ATOM 1907 C CYS 129 10.082 79.179 8.478 1.00 0.50 C ATOM 1908 O CYS 129 9.147 78.491 8.889 1.00 0.50 O ATOM 1909 CB CYS 129 10.075 78.288 6.145 1.00 0.50 C ATOM 1910 SG CYS 129 11.013 77.712 4.707 1.00 0.50 S ATOM 1916 N CYS 130 10.390 80.363 8.995 1.00 0.50 N ATOM 1917 CA CYS 130 9.629 80.940 10.097 1.00 0.50 C ATOM 1918 C CYS 130 8.180 80.473 10.071 1.00 0.50 C ATOM 1919 O CYS 130 7.491 80.613 9.060 1.00 0.50 O ATOM 1920 CB CYS 130 9.678 82.471 10.036 1.00 0.50 C ATOM 1921 SG CYS 130 11.339 83.133 9.752 1.00 0.50 S ATOM 1927 N THR 131 7.722 79.916 11.187 1.00 0.50 N ATOM 1928 CA THR 131 6.353 79.426 11.293 1.00 0.50 C ATOM 1929 C THR 131 5.420 80.194 10.365 1.00 0.50 C ATOM 1930 O THR 131 4.575 79.603 9.693 1.00 0.50 O ATOM 1931 CB THR 131 5.834 79.538 12.744 1.00 0.50 C ATOM 1932 OG1 THR 131 6.708 78.799 13.606 1.00 0.50 O ATOM 1933 CG2 THR 131 4.422 78.981 12.866 1.00 0.50 C ATOM 1941 N ASN 132 5.578 81.512 10.333 1.00 0.50 N ATOM 1942 CA ASN 132 4.750 82.363 9.488 1.00 0.50 C ATOM 1943 C ASN 132 5.128 82.215 8.019 1.00 0.50 C ATOM 1944 O ASN 132 5.031 83.167 7.245 1.00 0.50 O ATOM 1945 CB ASN 132 4.871 83.828 9.921 1.00 0.50 C ATOM 1946 CG ASN 132 6.314 84.268 10.084 1.00 0.50 C ATOM 1947 OD1 ASN 132 7.030 83.778 10.963 1.00 0.50 O ATOM 1948 ND2 ASN 132 6.756 85.194 9.241 1.00 0.50 N ATOM 1955 N TYR 133 5.561 81.017 7.643 1.00 0.50 N ATOM 1956 CA TYR 133 5.955 80.743 6.266 1.00 0.50 C ATOM 1957 C TYR 133 4.744 80.715 5.342 1.00 0.50 C ATOM 1958 O TYR 133 4.634 81.526 4.422 1.00 0.50 O ATOM 1959 CB TYR 133 6.702 79.405 6.180 1.00 0.50 C ATOM 1960 CG TYR 133 7.099 79.020 4.771 1.00 0.50 C ATOM 1961 CD1 TYR 133 6.236 78.286 3.960 1.00 0.50 C ATOM 1962 CD2 TYR 133 8.337 79.393 4.254 1.00 0.50 C ATOM 1963 CE1 TYR 133 6.598 77.929 2.665 1.00 0.50 C ATOM 1964 CE2 TYR 133 8.710 79.042 2.961 1.00 0.50 C ATOM 1965 CZ TYR 133 7.835 78.310 2.174 1.00 0.50 C ATOM 1966 OH TYR 133 8.200 77.962 0.894 1.00 0.50 H ATOM 1976 N GLN 134 3.837 79.777 5.591 1.00 0.50 N ATOM 1977 CA GLN 134 2.631 79.643 4.782 1.00 0.50 C ATOM 1978 C GLN 134 2.000 81.001 4.503 1.00 0.50 C ATOM 1979 O GLN 134 1.982 81.464 3.362 1.00 0.50 O ATOM 1980 CB GLN 134 1.616 78.733 5.481 1.00 0.50 C ATOM 1981 CG GLN 134 0.342 78.508 4.673 1.00 0.50 C ATOM 1982 CD GLN 134 -0.631 77.570 5.363 1.00 0.50 C ATOM 1983 OE1 GLN 134 -0.391 77.124 6.491 1.00 0.50 O ATOM 1984 NE2 GLN 134 -1.737 77.258 4.695 1.00 0.50 N ATOM 1993 N VAL 135 1.483 81.633 5.550 1.00 0.50 N ATOM 1994 CA VAL 135 0.850 82.941 5.420 1.00 0.50 C ATOM 1995 C VAL 135 1.865 84.006 5.021 1.00 0.50 C ATOM 1996 O VAL 135 1.502 85.055 4.489 1.00 0.50 O ATOM 1997 CB VAL 135 0.155 83.361 6.734 1.00 0.50 C ATOM 1998 CG1 VAL 135 1.185 83.709 7.803 1.00 0.50 C ATOM 1999 CG2 VAL 135 -0.772 84.547 6.489 1.00 0.50 C ATOM 2009 N VAL 136 3.138 83.730 5.283 1.00 0.50 N ATOM 2010 CA VAL 136 4.208 84.664 4.951 1.00 0.50 C ATOM 2011 C VAL 136 4.727 84.427 3.538 1.00 0.50 C ATOM 2012 O VAL 136 4.827 85.358 2.740 1.00 0.50 O ATOM 2013 CB VAL 136 5.379 84.555 5.954 1.00 0.50 C ATOM 2014 CG1 VAL 136 6.502 85.517 5.579 1.00 0.50 C ATOM 2015 CG2 VAL 136 4.894 84.839 7.371 1.00 0.50 C ATOM 2025 N CYS 137 5.059 83.177 3.238 1.00 0.50 N ATOM 2026 CA CYS 137 5.569 82.816 1.920 1.00 0.50 C ATOM 2027 C CYS 137 5.614 84.025 0.996 1.00 0.50 C ATOM 2028 O CYS 137 6.357 84.042 0.015 1.00 0.50 O ATOM 2029 CB CYS 137 4.701 81.720 1.292 1.00 0.50 C ATOM 2030 SG CYS 137 4.558 80.233 2.316 1.00 0.50 S ATOM 2036 N LYS 138 4.812 85.036 1.314 1.00 0.50 N ATOM 2037 CA LYS 138 4.759 86.253 0.513 1.00 0.50 C ATOM 2038 C LYS 138 3.866 87.303 1.163 1.00 0.50 C ATOM 2039 O LYS 138 4.319 88.399 1.492 1.00 0.50 O ATOM 2040 CB LYS 138 4.252 85.943 -0.898 1.00 0.50 C ATOM 2041 CG LYS 138 4.236 87.150 -1.824 1.00 0.50 C ATOM 2042 CD LYS 138 3.807 86.764 -3.233 1.00 0.50 C ATOM 2043 CE LYS 138 3.788 87.969 -4.166 1.00 0.50 C ATOM 2044 NZ LYS 138 3.349 87.595 -5.542 1.00 0.50 N ATOM 2058 N GLY 139 2.596 86.960 1.344 1.00 0.50 N ATOM 2059 CA GLY 139 1.636 87.872 1.955 1.00 0.50 C ATOM 2060 C GLY 139 0.206 87.485 1.604 1.00 0.50 C ATOM 2061 O GLY 139 -0.581 87.120 2.478 1.00 0.50 O ATOM 2065 N GLU 140 -0.126 87.566 0.320 1.00 0.50 N ATOM 2066 CA GLU 140 -1.463 87.223 -0.149 1.00 0.50 C ATOM 2067 C GLU 140 -1.472 86.974 -1.652 1.00 0.50 C ATOM 2068 O GLU 140 -0.632 87.498 -2.383 1.00 0.50 O ATOM 2069 CB GLU 140 -2.454 88.340 0.199 1.00 0.50 C ATOM 2070 CG GLU 140 -3.898 87.867 0.307 1.00 0.50 C ATOM 2071 CD GLU 140 -4.392 87.158 -0.941 1.00 0.50 C ATOM 2072 OE1 GLU 140 -4.246 85.921 -1.040 1.00 0.50 O ATOM 2073 OE2 GLU 140 -4.925 87.854 -1.838 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 58.31 47.7 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 63.29 45.2 62 100.0 62 ARMSMC BURIED . . . . . . . . 44.22 53.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.57 56.4 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 77.57 58.3 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 86.03 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 60.96 76.9 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.04 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 77.90 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 79.84 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 92.94 14.3 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.69 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 71.45 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 62.91 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 88.62 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.69 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 90.69 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 92.68 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 86.57 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.04 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.04 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0675 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 3.34 32 100.0 32 CRMSCA BURIED . . . . . . . . 2.14 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.18 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 3.50 156 100.0 156 CRMSMC BURIED . . . . . . . . 2.22 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.76 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.87 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.99 112 100.0 112 CRMSSC BURIED . . . . . . . . 5.24 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.53 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.75 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.98 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.978 0.565 0.288 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 2.184 0.571 0.291 32 100.0 32 ERRCA BURIED . . . . . . . . 1.469 0.551 0.281 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.075 0.571 0.289 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.325 0.585 0.294 156 100.0 156 ERRMC BURIED . . . . . . . . 1.475 0.538 0.276 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.169 0.722 0.361 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 4.198 0.717 0.358 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 4.449 0.737 0.369 112 100.0 112 ERRSC BURIED . . . . . . . . 3.575 0.689 0.344 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.001 0.637 0.321 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 3.234 0.650 0.326 240 100.0 240 ERRALL BURIED . . . . . . . . 2.466 0.607 0.308 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 21 35 41 45 45 45 DISTCA CA (P) 15.56 46.67 77.78 91.11 100.00 45 DISTCA CA (RMS) 0.62 1.28 1.83 2.27 3.04 DISTCA ALL (N) 39 117 204 280 330 345 345 DISTALL ALL (P) 11.30 33.91 59.13 81.16 95.65 345 DISTALL ALL (RMS) 0.67 1.38 1.92 2.61 3.70 DISTALL END of the results output