####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS452_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS452_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.29 2.29 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 97 - 139 1.82 2.33 LONGEST_CONTINUOUS_SEGMENT: 43 98 - 140 1.88 2.35 LCS_AVERAGE: 93.58 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 114 - 138 0.97 2.47 LONGEST_CONTINUOUS_SEGMENT: 25 115 - 139 0.93 2.56 LCS_AVERAGE: 41.53 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 45 3 5 8 12 14 26 31 36 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 43 45 3 3 5 9 13 27 38 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 4 43 45 3 4 4 7 14 25 41 41 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 12 43 45 3 16 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 12 43 45 8 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 12 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 12 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 12 43 45 7 24 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 12 43 45 7 21 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 12 43 45 4 14 28 37 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 12 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 12 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 12 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 12 43 45 8 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 12 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 12 43 45 4 5 8 19 33 38 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 12 43 45 5 16 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 8 43 45 4 5 14 19 28 37 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 25 43 45 3 16 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 25 43 45 3 16 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 25 43 45 7 24 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 25 43 45 8 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 25 43 45 4 17 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 25 43 45 4 26 33 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 25 43 45 4 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 25 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 25 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 25 43 45 5 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 25 43 45 8 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 25 43 45 6 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 25 43 45 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 25 43 45 7 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 25 43 45 3 7 31 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 5 43 45 0 5 5 5 9 35 38 39 39 42 43 44 44 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 78.37 ( 41.53 93.58 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 26 34 38 39 39 41 42 42 43 43 44 44 45 45 45 45 45 45 45 GDT PERCENT_AT 22.22 57.78 75.56 84.44 86.67 86.67 91.11 93.33 93.33 95.56 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.70 1.03 1.13 1.17 1.17 1.50 1.68 1.66 1.82 1.82 2.02 2.02 2.29 2.29 2.29 2.29 2.29 2.29 2.29 GDT RMS_ALL_AT 2.46 2.56 2.39 2.39 2.39 2.39 2.33 2.31 2.35 2.33 2.33 2.32 2.32 2.29 2.29 2.29 2.29 2.29 2.29 2.29 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: D 105 D 105 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 7.411 0 0.153 1.187 10.323 16.190 10.340 LGA A 97 A 97 4.939 0 0.079 0.093 6.724 36.071 31.524 LGA R 98 R 98 5.006 0 0.666 1.550 14.905 31.667 12.468 LGA G 99 G 99 1.807 0 0.185 0.185 2.640 77.738 77.738 LGA W 100 W 100 0.865 0 0.388 0.485 4.537 90.595 60.000 LGA E 101 E 101 0.999 0 0.120 0.180 2.216 83.810 77.831 LGA C 102 C 102 1.040 0 0.102 0.177 1.298 88.214 85.952 LGA T 103 T 103 1.043 0 0.122 1.197 4.045 81.429 71.633 LGA K 104 K 104 1.243 0 0.070 1.122 5.458 77.143 65.767 LGA D 105 D 105 2.264 0 0.080 0.289 2.695 68.810 63.929 LGA R 106 R 106 0.803 0 0.046 0.838 5.005 88.214 75.281 LGA C 107 C 107 1.400 0 0.031 0.789 4.198 81.429 72.619 LGA G 108 G 108 1.056 0 0.165 0.165 1.238 88.333 88.333 LGA E 109 E 109 1.131 0 0.035 0.872 4.592 81.429 70.476 LGA V 110 V 110 1.088 0 0.504 1.036 3.529 75.476 68.095 LGA R 111 R 111 3.462 0 0.048 1.376 8.652 55.476 28.182 LGA N 112 N 112 1.016 0 0.078 0.997 6.283 75.476 54.881 LGA E 113 E 113 4.324 0 0.288 0.868 9.656 46.786 23.757 LGA E 114 E 114 1.383 0 0.588 0.960 6.494 73.095 54.921 LGA N 115 N 115 1.343 0 0.119 0.576 4.038 81.429 67.202 LGA A 116 A 116 1.226 0 0.143 0.144 1.923 83.690 81.524 LGA C 117 C 117 1.242 0 0.061 0.073 1.592 79.286 78.571 LGA H 118 H 118 1.401 0 0.052 1.050 5.506 79.286 60.429 LGA C 119 C 119 1.064 0 0.056 0.213 1.275 85.952 84.444 LGA S 120 S 120 0.647 0 0.100 0.762 2.713 90.476 84.921 LGA E 121 E 121 0.679 0 0.113 0.497 2.369 88.214 81.693 LGA D 122 D 122 0.390 0 0.145 0.866 3.759 92.857 76.905 LGA C 123 C 123 0.432 0 0.088 0.118 1.288 92.976 93.730 LGA L 124 L 124 1.639 0 0.067 1.452 4.800 75.238 70.060 LGA S 125 S 125 2.065 0 0.158 0.549 3.742 64.881 61.270 LGA R 126 R 126 1.737 0 0.153 1.385 6.254 70.833 56.147 LGA G 127 G 127 1.109 0 0.111 0.111 1.139 81.429 81.429 LGA D 128 D 128 1.179 0 0.120 1.138 3.828 81.429 74.524 LGA C 129 C 129 1.287 0 0.108 0.242 1.542 85.952 81.587 LGA C 130 C 130 0.829 0 0.104 0.172 1.520 83.810 84.524 LGA T 131 T 131 1.253 0 0.040 1.098 3.231 81.548 75.782 LGA N 132 N 132 1.139 0 0.134 0.367 1.813 81.548 81.548 LGA Y 133 Y 133 0.997 0 0.091 0.534 1.953 88.214 80.873 LGA Q 134 Q 134 1.480 0 0.116 1.363 7.765 79.286 54.656 LGA V 135 V 135 1.483 0 0.073 0.121 2.425 85.952 79.184 LGA V 136 V 136 0.305 0 0.057 1.088 3.066 95.238 84.898 LGA C 137 C 137 0.577 0 0.103 0.848 3.485 92.857 83.810 LGA K 138 K 138 0.952 0 0.284 0.817 9.525 81.786 53.016 LGA G 139 G 139 2.596 0 0.653 0.653 3.376 61.429 61.429 LGA E 140 E 140 6.525 0 0.540 0.968 14.120 27.024 12.222 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.290 2.120 3.710 75.778 66.225 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.68 83.889 88.756 2.360 LGA_LOCAL RMSD: 1.679 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.314 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.290 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.692993 * X + 0.643199 * Y + 0.325661 * Z + -19.277166 Y_new = -0.560919 * X + -0.764807 * Y + 0.316923 * Z + 77.234459 Z_new = 0.452913 * X + 0.036956 * Y + 0.890789 * Z + -50.623886 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.461137 -0.470030 0.041463 [DEG: -141.0128 -26.9307 2.3757 ] ZXZ: 2.342597 0.471719 1.489380 [DEG: 134.2209 27.0275 85.3352 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS452_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS452_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.68 88.756 2.29 REMARK ---------------------------------------------------------- MOLECULE T0543TS452_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2cqw_A ATOM 728 N THR 96 16.635 91.717 18.608 1.00 99.90 N ATOM 729 CA THR 96 16.194 91.988 19.946 1.00 99.90 C ATOM 730 C THR 96 14.948 91.204 20.210 1.00 99.90 C ATOM 731 O THR 96 14.781 90.643 21.291 1.00 99.90 O ATOM 732 CB THR 96 15.911 93.445 20.202 1.00 99.90 C ATOM 733 OG1 THR 96 14.857 93.921 19.378 1.00 99.90 O ATOM 734 CG2 THR 96 17.196 94.243 19.924 1.00 99.90 C ATOM 735 N ALA 97 14.040 91.129 19.219 1.00 99.90 N ATOM 736 CA ALA 97 12.821 90.417 19.439 1.00 99.90 C ATOM 737 C ALA 97 13.092 88.985 19.134 1.00 99.90 C ATOM 738 O ALA 97 13.552 88.643 18.046 1.00 99.90 O ATOM 739 CB ALA 97 11.665 90.874 18.534 1.00 99.90 C ATOM 740 N ARG 98 12.817 88.104 20.111 1.00 99.90 N ATOM 741 CA ARG 98 12.882 86.702 19.839 1.00 99.90 C ATOM 742 C ARG 98 11.523 86.296 19.373 1.00 99.90 C ATOM 743 O ARG 98 10.516 86.845 19.817 1.00 99.90 O ATOM 744 CB ARG 98 13.230 85.865 21.081 1.00 99.90 C ATOM 745 CG ARG 98 14.724 85.843 21.408 1.00 99.90 C ATOM 746 CD ARG 98 15.580 85.209 20.308 1.00 99.90 C ATOM 747 NE ARG 98 16.919 84.905 20.894 1.00 99.90 N ATOM 748 CZ ARG 98 17.953 85.807 20.911 1.00 99.90 C ATOM 749 NH1 ARG 98 17.882 87.078 20.403 1.00 99.90 H ATOM 750 NH2 ARG 98 19.134 85.412 21.472 1.00 99.90 H ATOM 751 N GLY 99 11.463 85.325 18.443 1.00 99.90 N ATOM 752 CA GLY 99 10.188 84.892 17.952 1.00 99.90 C ATOM 753 C GLY 99 10.371 84.461 16.535 1.00 99.90 C ATOM 754 O GLY 99 11.236 84.968 15.823 1.00 99.90 O ATOM 755 N TRP 100 9.544 83.494 16.091 1.00 99.90 N ATOM 756 CA TRP 100 9.634 83.030 14.741 1.00 99.90 C ATOM 757 C TRP 100 8.472 83.588 13.995 1.00 99.90 C ATOM 758 O TRP 100 7.462 82.910 13.810 1.00 99.90 O ATOM 759 CB TRP 100 9.535 81.503 14.604 1.00 99.90 C ATOM 760 CG TRP 100 10.406 80.739 15.569 1.00 99.90 C ATOM 761 CD1 TRP 100 10.560 80.906 16.926 1.00 99.90 C ATOM 762 CD2 TRP 100 11.265 79.624 15.177 1.00 99.90 C ATOM 763 NE1 TRP 100 11.450 79.979 17.282 1.00 99.90 N ATOM 764 CE2 TRP 100 11.913 79.173 16.326 1.00 99.90 C ATOM 765 CE3 TRP 100 11.486 79.027 13.971 1.00 99.90 C ATOM 766 CZ2 TRP 100 12.792 78.133 16.331 1.00 99.90 C ATOM 767 CZ3 TRP 100 12.380 77.976 13.959 1.00 99.90 C ATOM 768 CH2 TRP 100 13.017 77.539 15.107 1.00 99.90 H ATOM 769 N GLU 101 8.584 84.849 13.539 1.00 99.90 N ATOM 770 CA GLU 101 7.651 85.315 12.559 1.00 99.90 C ATOM 771 C GLU 101 8.446 85.927 11.457 1.00 99.90 C ATOM 772 O GLU 101 9.614 86.269 11.632 1.00 99.90 O ATOM 773 CB GLU 101 6.684 86.392 13.084 1.00 99.90 C ATOM 774 CG GLU 101 5.644 85.853 14.069 1.00 99.90 C ATOM 775 CD GLU 101 4.550 86.899 14.230 1.00 99.90 C ATOM 776 OE1 GLU 101 3.613 86.650 15.033 1.00 99.90 O ATOM 777 OE2 GLU 101 4.637 87.960 13.555 1.00 99.90 O ATOM 778 N CYS 102 7.823 86.069 10.272 1.00 99.90 N ATOM 779 CA CYS 102 8.423 86.862 9.244 1.00 99.90 C ATOM 780 C CYS 102 7.429 87.907 8.868 1.00 99.90 C ATOM 781 O CYS 102 6.290 87.895 9.334 1.00 99.90 O ATOM 782 CB CYS 102 8.759 86.068 7.970 1.00 99.90 C ATOM 783 SG CYS 102 9.926 84.711 8.287 1.00 99.90 S ATOM 784 N THR 103 7.849 88.856 8.013 1.00 99.90 N ATOM 785 CA THR 103 6.934 89.833 7.508 1.00 99.90 C ATOM 786 C THR 103 7.094 89.810 6.011 1.00 99.90 C ATOM 787 O THR 103 7.816 88.959 5.494 1.00 99.90 O ATOM 788 CB THR 103 7.193 91.199 8.122 1.00 99.90 C ATOM 789 OG1 THR 103 6.162 92.126 7.811 1.00 99.90 O ATOM 790 CG2 THR 103 8.573 91.728 7.698 1.00 99.90 C ATOM 791 N LYS 104 6.390 90.711 5.286 1.00 99.90 N ATOM 792 CA LYS 104 6.319 90.715 3.853 1.00 99.90 C ATOM 793 C LYS 104 7.682 90.994 3.300 1.00 99.90 C ATOM 794 O LYS 104 8.166 90.274 2.426 1.00 99.90 O ATOM 795 CB LYS 104 5.369 91.810 3.334 1.00 99.90 C ATOM 796 CG LYS 104 5.226 91.862 1.812 1.00 99.90 C ATOM 797 CD LYS 104 4.315 90.774 1.248 1.00 99.90 C ATOM 798 CE LYS 104 4.993 89.407 1.148 1.00 99.90 C ATOM 799 NZ LYS 104 4.099 88.454 0.458 1.00 99.90 N ATOM 800 N ASP 105 8.343 92.049 3.813 1.00 99.90 N ATOM 801 CA ASP 105 9.522 92.555 3.173 1.00 99.90 C ATOM 802 C ASP 105 10.655 91.620 3.452 1.00 99.90 C ATOM 803 O ASP 105 11.649 91.607 2.728 1.00 99.90 O ATOM 804 CB ASP 105 9.927 93.948 3.685 1.00 99.90 C ATOM 805 CG ASP 105 9.824 93.940 5.202 1.00 99.90 C ATOM 806 OD1 ASP 105 8.791 94.436 5.727 1.00 99.90 O ATOM 807 OD2 ASP 105 10.774 93.435 5.857 1.00 99.90 O ATOM 808 N ARG 106 10.530 90.794 4.508 1.00 99.90 N ATOM 809 CA ARG 106 11.631 89.968 4.908 1.00 99.90 C ATOM 810 C ARG 106 11.644 88.737 4.060 1.00 99.90 C ATOM 811 O ARG 106 12.585 87.950 4.128 1.00 99.90 O ATOM 812 CB ARG 106 11.549 89.501 6.368 1.00 99.90 C ATOM 813 CG ARG 106 12.284 90.426 7.338 1.00 99.90 C ATOM 814 CD ARG 106 12.566 89.783 8.697 1.00 99.90 C ATOM 815 NE ARG 106 13.535 88.670 8.469 1.00 99.90 N ATOM 816 CZ ARG 106 14.895 88.844 8.488 1.00 99.90 C ATOM 817 NH1 ARG 106 15.519 90.042 8.714 1.00 99.90 H ATOM 818 NH2 ARG 106 15.679 87.749 8.266 1.00 99.90 H ATOM 819 N CYS 107 10.602 88.531 3.233 1.00 99.90 N ATOM 820 CA CYS 107 10.636 87.418 2.334 1.00 99.90 C ATOM 821 C CYS 107 11.642 87.733 1.279 1.00 99.90 C ATOM 822 O CYS 107 11.626 88.813 0.692 1.00 99.90 O ATOM 823 CB CYS 107 9.293 87.144 1.635 1.00 99.90 C ATOM 824 SG CYS 107 9.404 85.790 0.425 1.00 99.90 S ATOM 825 N GLY 108 12.564 86.786 1.027 1.00 99.90 N ATOM 826 CA GLY 108 13.569 87.007 0.034 1.00 99.90 C ATOM 827 C GLY 108 14.675 87.774 0.676 1.00 99.90 C ATOM 828 O GLY 108 15.330 88.589 0.030 1.00 99.90 O ATOM 829 N GLU 109 14.905 87.526 1.980 1.00 99.90 N ATOM 830 CA GLU 109 15.971 88.208 2.662 1.00 99.90 C ATOM 831 C GLU 109 17.269 87.682 2.147 1.00 99.90 C ATOM 832 O GLU 109 17.378 86.523 1.748 1.00 99.90 O ATOM 833 CB GLU 109 15.979 88.067 4.205 1.00 99.90 C ATOM 834 CG GLU 109 15.813 86.646 4.763 1.00 99.90 C ATOM 835 CD GLU 109 17.165 86.141 5.239 1.00 99.90 C ATOM 836 OE1 GLU 109 18.186 86.789 4.894 1.00 99.90 O ATOM 837 OE2 GLU 109 17.200 85.103 5.951 1.00 99.90 O ATOM 838 N VAL 110 18.292 88.556 2.126 1.00 99.90 N ATOM 839 CA VAL 110 19.603 88.138 1.732 1.00 99.90 C ATOM 840 C VAL 110 20.304 87.704 2.974 1.00 99.90 C ATOM 841 O VAL 110 20.540 86.515 3.182 1.00 99.90 O ATOM 842 CB VAL 110 20.408 89.244 1.115 1.00 99.90 C ATOM 843 CG1 VAL 110 21.747 88.667 0.616 1.00 99.90 C ATOM 844 CG2 VAL 110 19.565 89.887 0.001 1.00 99.90 C ATOM 845 N ARG 111 20.636 88.668 3.852 1.00 99.90 N ATOM 846 CA ARG 111 21.413 88.344 5.009 1.00 99.90 C ATOM 847 C ARG 111 20.480 88.262 6.169 1.00 99.90 C ATOM 848 O ARG 111 19.646 89.143 6.371 1.00 99.90 O ATOM 849 CB ARG 111 22.470 89.409 5.345 1.00 99.90 C ATOM 850 CG ARG 111 23.569 88.909 6.282 1.00 99.90 C ATOM 851 CD ARG 111 24.446 87.821 5.660 1.00 99.90 C ATOM 852 NE ARG 111 23.596 86.603 5.497 1.00 99.90 N ATOM 853 CZ ARG 111 23.717 85.739 4.440 1.00 99.90 C ATOM 854 NH1 ARG 111 24.609 85.895 3.410 1.00 99.90 H ATOM 855 NH2 ARG 111 22.896 84.649 4.410 1.00 99.90 H ATOM 856 N ASN 112 20.595 87.185 6.969 1.00 99.90 N ATOM 857 CA ASN 112 19.990 87.220 8.265 1.00 99.90 C ATOM 858 C ASN 112 21.098 87.304 9.260 1.00 99.90 C ATOM 859 O ASN 112 22.097 86.594 9.161 1.00 99.90 O ATOM 860 CB ASN 112 19.139 85.980 8.601 1.00 99.90 C ATOM 861 CG ASN 112 19.921 84.720 8.256 1.00 99.90 C ATOM 862 OD1 ASN 112 20.596 84.146 9.108 1.00 99.90 O ATOM 863 ND2 ASN 112 19.825 84.270 6.976 1.00 99.90 N ATOM 864 N GLU 113 20.951 88.208 10.246 1.00 99.90 N ATOM 865 CA GLU 113 21.961 88.341 11.250 1.00 99.90 C ATOM 866 C GLU 113 21.657 87.329 12.306 1.00 99.90 C ATOM 867 O GLU 113 22.364 86.331 12.439 1.00 99.90 O ATOM 868 CB GLU 113 21.998 89.746 11.888 1.00 99.90 C ATOM 869 CG GLU 113 23.106 89.944 12.928 1.00 99.90 C ATOM 870 CD GLU 113 24.451 89.718 12.254 1.00 99.90 C ATOM 871 OE1 GLU 113 25.486 89.780 12.971 1.00 99.90 O ATOM 872 OE2 GLU 113 24.463 89.479 11.018 1.00 99.90 O ATOM 873 N GLU 114 20.580 87.549 13.088 1.00 99.90 N ATOM 874 CA GLU 114 20.297 86.660 14.169 1.00 99.90 C ATOM 875 C GLU 114 18.818 86.506 14.218 1.00 99.90 C ATOM 876 O GLU 114 18.094 87.445 14.548 1.00 99.90 O ATOM 877 CB GLU 114 20.743 87.202 15.538 1.00 99.90 C ATOM 878 CG GLU 114 20.563 86.204 16.684 1.00 99.90 C ATOM 879 CD GLU 114 21.162 86.824 17.938 1.00 99.90 C ATOM 880 OE1 GLU 114 22.382 87.139 17.918 1.00 99.90 O ATOM 881 OE2 GLU 114 20.408 86.994 18.932 1.00 99.90 O ATOM 882 N ASN 115 18.324 85.307 13.867 1.00 99.90 N ATOM 883 CA ASN 115 16.915 85.077 13.927 1.00 99.90 C ATOM 884 C ASN 115 16.736 83.639 14.284 1.00 99.90 C ATOM 885 O ASN 115 17.695 82.869 14.300 1.00 99.90 O ATOM 886 CB ASN 115 16.215 85.328 12.580 1.00 99.90 C ATOM 887 CG ASN 115 14.749 85.670 12.816 1.00 99.90 C ATOM 888 OD1 ASN 115 14.337 85.975 13.934 1.00 99.90 O ATOM 889 ND2 ASN 115 13.936 85.614 11.726 1.00 99.90 N ATOM 890 N ALA 116 15.488 83.243 14.593 1.00 99.90 N ATOM 891 CA ALA 116 15.220 81.864 14.855 1.00 99.90 C ATOM 892 C ALA 116 15.315 81.153 13.546 1.00 99.90 C ATOM 893 O ALA 116 16.260 80.404 13.305 1.00 99.90 O ATOM 894 CB ALA 116 13.816 81.623 15.433 1.00 99.90 C ATOM 895 N CYS 117 14.330 81.385 12.656 1.00 99.90 N ATOM 896 CA CYS 117 14.294 80.673 11.419 1.00 99.90 C ATOM 897 C CYS 117 14.818 81.594 10.369 1.00 99.90 C ATOM 898 O CYS 117 15.215 82.719 10.658 1.00 99.90 O ATOM 899 CB CYS 117 12.871 80.262 11.005 1.00 99.90 C ATOM 900 SG CYS 117 11.722 81.671 10.981 1.00 99.90 S ATOM 901 N HIS 118 14.843 81.127 9.108 1.00 99.90 N ATOM 902 CA HIS 118 15.251 81.985 8.039 1.00 99.90 C ATOM 903 C HIS 118 14.036 82.277 7.223 1.00 99.90 C ATOM 904 O HIS 118 13.092 81.488 7.190 1.00 99.90 O ATOM 905 CB HIS 118 16.299 81.344 7.114 1.00 99.90 C ATOM 906 CG HIS 118 16.984 82.327 6.213 1.00 99.90 C ATOM 907 ND1 HIS 118 18.169 82.072 5.560 1.00 99.90 N ATOM 908 CD2 HIS 118 16.626 83.591 5.855 1.00 99.90 C ATOM 909 CE1 HIS 118 18.469 83.187 4.846 1.00 99.90 C ATOM 910 NE2 HIS 118 17.563 84.135 4.995 1.00 99.90 N ATOM 911 N CYS 119 14.023 83.445 6.554 1.00 99.90 N ATOM 912 CA CYS 119 12.867 83.832 5.800 1.00 99.90 C ATOM 913 C CYS 119 13.283 83.923 4.371 1.00 99.90 C ATOM 914 O CYS 119 12.721 84.698 3.599 1.00 99.90 O ATOM 915 CB CYS 119 12.322 85.212 6.200 1.00 99.90 C ATOM 916 SG CYS 119 11.519 85.199 7.832 1.00 99.90 S ATOM 917 N SER 120 14.292 83.125 3.979 1.00 99.90 N ATOM 918 CA SER 120 14.876 83.301 2.684 1.00 99.90 C ATOM 919 C SER 120 14.134 82.428 1.723 1.00 99.90 C ATOM 920 O SER 120 13.203 81.718 2.101 1.00 99.90 O ATOM 921 CB SER 120 16.364 82.916 2.638 1.00 99.90 C ATOM 922 OG SER 120 17.012 83.557 1.549 1.00 99.90 O ATOM 923 N GLU 121 14.538 82.471 0.438 1.00 99.90 N ATOM 924 CA GLU 121 14.031 81.548 -0.534 1.00 99.90 C ATOM 925 C GLU 121 14.709 80.246 -0.264 1.00 99.90 C ATOM 926 O GLU 121 14.167 79.172 -0.521 1.00 99.90 O ATOM 927 CB GLU 121 14.364 81.972 -1.978 1.00 99.90 C ATOM 928 CG GLU 121 13.478 81.330 -3.051 1.00 99.90 C ATOM 929 CD GLU 121 12.022 81.554 -2.669 1.00 99.90 C ATOM 930 OE1 GLU 121 11.617 82.742 -2.556 1.00 99.90 O ATOM 931 OE2 GLU 121 11.295 80.541 -2.486 1.00 99.90 O ATOM 932 N ASP 122 15.926 80.325 0.311 1.00 99.90 N ATOM 933 CA ASP 122 16.717 79.169 0.615 1.00 99.90 C ATOM 934 C ASP 122 16.060 78.389 1.715 1.00 99.90 C ATOM 935 O ASP 122 16.294 77.190 1.849 1.00 99.90 O ATOM 936 CB ASP 122 18.133 79.537 1.094 1.00 99.90 C ATOM 937 CG ASP 122 18.994 78.281 1.074 1.00 99.90 C ATOM 938 OD1 ASP 122 19.086 77.611 2.136 1.00 99.90 O ATOM 939 OD2 ASP 122 19.570 77.975 -0.003 1.00 99.90 O ATOM 940 N CYS 123 15.206 79.048 2.528 1.00 99.90 N ATOM 941 CA CYS 123 14.631 78.440 3.695 1.00 99.90 C ATOM 942 C CYS 123 13.655 77.379 3.289 1.00 99.90 C ATOM 943 O CYS 123 13.343 76.493 4.084 1.00 99.90 O ATOM 944 CB CYS 123 13.856 79.444 4.564 1.00 99.90 C ATOM 945 SG CYS 123 12.452 80.193 3.684 1.00 99.90 S ATOM 946 N LEU 124 13.139 77.443 2.044 1.00 99.90 N ATOM 947 CA LEU 124 12.193 76.472 1.580 1.00 99.90 C ATOM 948 C LEU 124 12.904 75.165 1.423 1.00 99.90 C ATOM 949 O LEU 124 12.427 74.132 1.891 1.00 99.90 O ATOM 950 CB LEU 124 11.590 76.831 0.211 1.00 99.90 C ATOM 951 CG LEU 124 10.545 75.814 -0.285 1.00 99.90 C ATOM 952 CD1 LEU 124 9.364 75.704 0.694 1.00 99.90 C ATOM 953 CD2 LEU 124 10.102 76.124 -1.724 1.00 99.90 C ATOM 954 N SER 125 14.075 75.188 0.756 1.00 99.90 N ATOM 955 CA SER 125 14.733 73.972 0.373 1.00 99.90 C ATOM 956 C SER 125 15.318 73.356 1.602 1.00 99.90 C ATOM 957 O SER 125 15.268 72.139 1.779 1.00 99.90 O ATOM 958 CB SER 125 15.889 74.205 -0.615 1.00 99.90 C ATOM 959 OG SER 125 16.553 72.979 -0.886 1.00 99.90 O ATOM 960 N ARG 126 15.889 74.197 2.483 1.00 99.90 N ATOM 961 CA ARG 126 16.626 73.709 3.610 1.00 99.90 C ATOM 962 C ARG 126 15.640 73.159 4.584 1.00 99.90 C ATOM 963 O ARG 126 15.904 72.168 5.265 1.00 99.90 O ATOM 964 CB ARG 126 17.420 74.818 4.323 1.00 99.90 C ATOM 965 CG ARG 126 18.560 74.292 5.197 1.00 99.90 C ATOM 966 CD ARG 126 19.741 73.743 4.392 1.00 99.90 C ATOM 967 NE ARG 126 20.808 73.359 5.363 1.00 99.90 N ATOM 968 CZ ARG 126 21.846 72.520 5.044 1.00 99.90 C ATOM 969 NH1 ARG 126 22.029 71.946 3.814 1.00 99.90 H ATOM 970 NH2 ARG 126 22.760 72.239 6.019 1.00 99.90 H ATOM 971 N GLY 127 14.457 73.792 4.660 1.00 99.90 N ATOM 972 CA GLY 127 13.464 73.358 5.593 1.00 99.90 C ATOM 973 C GLY 127 13.575 74.235 6.793 1.00 99.90 C ATOM 974 O GLY 127 13.075 73.903 7.867 1.00 99.90 O ATOM 975 N ASP 128 14.247 75.390 6.638 1.00 99.90 N ATOM 976 CA ASP 128 14.445 76.256 7.758 1.00 99.90 C ATOM 977 C ASP 128 13.420 77.335 7.666 1.00 99.90 C ATOM 978 O ASP 128 13.684 78.484 8.010 1.00 99.90 O ATOM 979 CB ASP 128 15.825 76.936 7.756 1.00 99.90 C ATOM 980 CG ASP 128 16.875 75.877 8.065 1.00 99.90 C ATOM 981 OD1 ASP 128 16.482 74.709 8.321 1.00 99.90 O ATOM 982 OD2 ASP 128 18.086 76.226 8.051 1.00 99.90 O ATOM 983 N CYS 129 12.207 76.993 7.195 1.00 99.90 N ATOM 984 CA CYS 129 11.203 78.002 7.054 1.00 99.90 C ATOM 985 C CYS 129 10.690 78.314 8.419 1.00 99.90 C ATOM 986 O CYS 129 10.914 77.563 9.367 1.00 99.90 O ATOM 987 CB CYS 129 10.007 77.563 6.191 1.00 99.90 C ATOM 988 SG CYS 129 10.499 77.127 4.496 1.00 99.90 S ATOM 989 N CYS 130 9.991 79.457 8.554 1.00 99.90 N ATOM 990 CA CYS 130 9.390 79.785 9.811 1.00 99.90 C ATOM 991 C CYS 130 8.074 79.085 9.863 1.00 99.90 C ATOM 992 O CYS 130 7.690 78.390 8.924 1.00 99.90 O ATOM 993 CB CYS 130 9.126 81.291 9.997 1.00 99.90 C ATOM 994 SG CYS 130 10.656 82.275 9.990 1.00 99.90 S ATOM 995 N THR 131 7.350 79.242 10.988 1.00 99.90 N ATOM 996 CA THR 131 6.115 78.531 11.134 1.00 99.90 C ATOM 997 C THR 131 5.034 79.331 10.475 1.00 99.90 C ATOM 998 O THR 131 3.987 78.794 10.117 1.00 99.90 O ATOM 999 CB THR 131 5.737 78.216 12.572 1.00 99.90 C ATOM 1000 OG1 THR 131 4.495 77.529 12.599 1.00 99.90 O ATOM 1001 CG2 THR 131 5.652 79.481 13.449 1.00 99.90 C ATOM 1002 N ASN 132 5.271 80.641 10.266 1.00 99.90 N ATOM 1003 CA ASN 132 4.266 81.460 9.661 1.00 99.90 C ATOM 1004 C ASN 132 4.852 82.022 8.410 1.00 99.90 C ATOM 1005 O ASN 132 4.460 83.095 7.953 1.00 99.90 O ATOM 1006 CB ASN 132 3.804 82.628 10.559 1.00 99.90 C ATOM 1007 CG ASN 132 4.974 83.554 10.881 1.00 99.90 C ATOM 1008 OD1 ASN 132 5.984 83.156 11.458 1.00 99.90 O ATOM 1009 ND2 ASN 132 4.821 84.851 10.499 1.00 99.90 N ATOM 1010 N TYR 133 5.813 81.281 7.821 1.00 99.90 N ATOM 1011 CA TYR 133 6.518 81.747 6.664 1.00 99.90 C ATOM 1012 C TYR 133 5.567 81.730 5.516 1.00 99.90 C ATOM 1013 O TYR 133 5.515 82.670 4.726 1.00 99.90 O ATOM 1014 CB TYR 133 7.701 80.846 6.274 1.00 99.90 C ATOM 1015 CG TYR 133 8.411 81.513 5.148 1.00 99.90 C ATOM 1016 CD1 TYR 133 9.338 82.501 5.394 1.00 99.90 C ATOM 1017 CD2 TYR 133 8.153 81.149 3.847 1.00 99.90 C ATOM 1018 CE1 TYR 133 9.995 83.118 4.356 1.00 99.90 C ATOM 1019 CE2 TYR 133 8.806 81.763 2.805 1.00 99.90 C ATOM 1020 CZ TYR 133 9.728 82.750 3.060 1.00 99.90 C ATOM 1021 OH TYR 133 10.399 83.381 1.992 1.00 99.90 H ATOM 1022 N GLN 134 4.769 80.652 5.409 1.00 99.90 N ATOM 1023 CA GLN 134 3.973 80.447 4.234 1.00 99.90 C ATOM 1024 C GLN 134 2.743 81.292 4.340 1.00 99.90 C ATOM 1025 O GLN 134 2.023 81.478 3.359 1.00 99.90 O ATOM 1026 CB GLN 134 3.536 78.978 4.035 1.00 99.90 C ATOM 1027 CG GLN 134 2.719 78.382 5.185 1.00 99.90 C ATOM 1028 CD GLN 134 3.689 77.861 6.238 1.00 99.90 C ATOM 1029 OE1 GLN 134 4.852 77.585 5.946 1.00 99.90 O ATOM 1030 NE2 GLN 134 3.199 77.726 7.499 1.00 99.90 N ATOM 1031 N VAL 135 2.480 81.839 5.542 1.00 99.90 N ATOM 1032 CA VAL 135 1.372 82.723 5.732 1.00 99.90 C ATOM 1033 C VAL 135 1.678 83.985 4.991 1.00 99.90 C ATOM 1034 O VAL 135 0.926 84.407 4.115 1.00 99.90 O ATOM 1035 CB VAL 135 1.167 83.065 7.180 1.00 99.90 C ATOM 1036 CG1 VAL 135 -0.001 84.056 7.298 1.00 99.90 C ATOM 1037 CG2 VAL 135 0.954 81.758 7.964 1.00 99.90 C ATOM 1038 N VAL 136 2.811 84.627 5.327 1.00 99.90 N ATOM 1039 CA VAL 136 3.009 85.969 4.862 1.00 99.90 C ATOM 1040 C VAL 136 3.446 85.919 3.410 1.00 99.90 C ATOM 1041 O VAL 136 2.986 86.711 2.587 1.00 99.90 O ATOM 1042 CB VAL 136 3.910 86.795 5.799 1.00 99.90 C ATOM 1043 CG1 VAL 136 5.299 86.165 6.031 1.00 99.90 C ATOM 1044 CG2 VAL 136 3.948 88.267 5.348 1.00 99.90 C ATOM 1045 N CYS 137 4.303 84.948 3.026 1.00 99.90 N ATOM 1046 CA CYS 137 5.154 85.173 1.891 1.00 99.90 C ATOM 1047 C CYS 137 4.389 84.891 0.641 1.00 99.90 C ATOM 1048 O CYS 137 4.599 85.556 -0.372 1.00 99.90 O ATOM 1049 CB CYS 137 6.399 84.271 1.865 1.00 99.90 C ATOM 1050 SG CYS 137 7.343 84.440 0.320 1.00 99.90 S ATOM 1051 N LYS 138 3.487 83.888 0.687 1.00 99.90 N ATOM 1052 CA LYS 138 2.816 83.438 -0.501 1.00 99.90 C ATOM 1053 C LYS 138 1.844 84.498 -0.901 1.00 99.90 C ATOM 1054 O LYS 138 1.641 84.753 -2.087 1.00 99.90 O ATOM 1055 CB LYS 138 2.023 82.136 -0.293 1.00 99.90 C ATOM 1056 CG LYS 138 2.898 80.884 -0.190 1.00 99.90 C ATOM 1057 CD LYS 138 2.100 79.577 -0.194 1.00 99.90 C ATOM 1058 CE LYS 138 2.954 78.334 -0.458 1.00 99.90 C ATOM 1059 NZ LYS 138 2.087 77.174 -0.771 1.00 99.90 N ATOM 1060 N GLY 139 1.239 85.171 0.092 1.00 99.90 N ATOM 1061 CA GLY 139 0.538 86.381 -0.211 1.00 99.90 C ATOM 1062 C GLY 139 -0.918 86.083 -0.131 1.00 99.90 C ATOM 1063 O GLY 139 -1.382 85.103 -0.716 1.00 99.90 O ATOM 1064 N GLU 140 -1.651 86.981 0.578 1.00 99.90 N ATOM 1065 CA GLU 140 -2.932 86.801 1.234 1.00 99.90 C ATOM 1066 C GLU 140 -3.243 85.378 1.592 1.00 99.90 C ATOM 1067 O GLU 140 -4.329 84.876 1.305 1.00 99.90 O ATOM 1068 CB GLU 140 -4.149 87.427 0.495 1.00 99.90 C ATOM 1069 CG GLU 140 -4.178 87.325 -1.037 1.00 99.90 C ATOM 1070 CD GLU 140 -5.394 88.087 -1.545 1.00 99.90 C ATOM 1071 OE1 GLU 140 -5.976 88.872 -0.749 1.00 99.90 O ATOM 1072 OE2 GLU 140 -5.755 87.897 -2.737 1.00 99.90 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 44.03 77.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 49.56 72.6 62 100.0 62 ARMSMC BURIED . . . . . . . . 26.52 88.5 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.44 38.5 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 88.65 38.9 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 101.33 26.9 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 58.86 61.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.40 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 81.12 38.9 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 94.64 31.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 59.10 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.96 69.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 60.10 66.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 65.40 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 17.23 100.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.12 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 90.12 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 82.15 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 104.25 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.29 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.29 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0509 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.55 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.45 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.35 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.62 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.54 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.90 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.01 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.47 112 100.0 112 CRMSSC BURIED . . . . . . . . 3.41 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.72 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.11 240 100.0 240 CRMSALL BURIED . . . . . . . . 2.62 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 98.125 0.965 0.966 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 97.923 0.962 0.963 32 100.0 32 ERRCA BURIED . . . . . . . . 98.624 0.975 0.975 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 98.073 0.964 0.965 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 97.863 0.961 0.962 156 100.0 156 ERRMC BURIED . . . . . . . . 98.576 0.974 0.974 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 96.059 0.928 0.931 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 96.032 0.927 0.931 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 95.513 0.918 0.922 112 100.0 112 ERRSC BURIED . . . . . . . . 97.212 0.948 0.950 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 97.169 0.948 0.950 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 96.845 0.942 0.945 240 100.0 240 ERRALL BURIED . . . . . . . . 97.911 0.961 0.963 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 36 39 42 45 45 45 DISTCA CA (P) 22.22 80.00 86.67 93.33 100.00 45 DISTCA CA (RMS) 0.76 1.24 1.33 1.71 2.29 DISTCA ALL (N) 57 200 244 298 337 345 345 DISTALL ALL (P) 16.52 57.97 70.72 86.38 97.68 345 DISTALL ALL (RMS) 0.77 1.28 1.55 2.22 3.22 DISTALL END of the results output