####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS449_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS449_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 126 - 136 4.91 59.61 LCS_AVERAGE: 21.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 99 - 104 1.91 69.11 LONGEST_CONTINUOUS_SEGMENT: 6 100 - 105 1.39 69.48 LONGEST_CONTINUOUS_SEGMENT: 6 108 - 113 1.81 52.25 LONGEST_CONTINUOUS_SEGMENT: 6 116 - 121 1.76 40.91 LONGEST_CONTINUOUS_SEGMENT: 6 125 - 130 1.80 58.26 LONGEST_CONTINUOUS_SEGMENT: 6 126 - 131 1.99 57.66 LCS_AVERAGE: 11.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.69 69.75 LONGEST_CONTINUOUS_SEGMENT: 5 126 - 130 0.94 58.76 LCS_AVERAGE: 8.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 10 3 3 3 3 3 3 4 4 6 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT A 97 A 97 3 5 10 3 3 3 4 5 5 5 6 6 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT R 98 R 98 3 5 10 3 3 3 4 5 5 5 6 6 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT G 99 G 99 3 6 10 3 3 3 4 5 6 6 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT W 100 W 100 5 6 10 3 5 5 5 6 6 6 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT E 101 E 101 5 6 10 4 5 5 5 6 6 6 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT C 102 C 102 5 6 10 4 5 5 5 6 6 6 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT T 103 T 103 5 6 10 4 5 5 5 6 6 6 6 7 7 9 9 9 9 10 10 10 10 11 11 LCS_GDT K 104 K 104 5 6 10 4 5 5 5 6 6 6 7 7 8 9 9 9 10 10 10 10 11 11 11 LCS_GDT D 105 D 105 3 6 10 0 3 4 5 6 6 6 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT R 106 R 106 3 4 10 1 3 4 4 4 4 5 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT C 107 C 107 4 5 10 0 3 4 5 5 5 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT G 108 G 108 4 6 10 3 3 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT E 109 E 109 4 6 10 3 3 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT V 110 V 110 4 6 10 3 4 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT R 111 R 111 4 6 10 3 4 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT N 112 N 112 4 6 10 1 4 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT E 113 E 113 4 6 10 1 4 4 5 6 6 7 7 7 8 8 8 9 10 10 10 10 11 11 11 LCS_GDT E 114 E 114 4 5 9 3 3 4 5 5 5 7 7 7 8 8 8 8 8 9 9 10 11 11 12 LCS_GDT N 115 N 115 3 4 9 3 3 3 4 4 5 5 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT A 116 A 116 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT C 117 C 117 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT H 118 H 118 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT C 119 C 119 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT S 120 S 120 3 6 9 3 3 5 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT E 121 E 121 3 6 9 3 3 4 5 6 6 6 7 7 8 8 8 8 8 9 10 11 11 11 12 LCS_GDT D 122 D 122 3 4 9 3 3 3 4 4 4 5 7 7 7 7 8 8 8 9 10 11 11 11 12 LCS_GDT C 123 C 123 3 4 9 3 3 3 4 4 4 5 6 6 7 7 7 8 8 9 10 11 11 11 12 LCS_GDT L 124 L 124 3 4 10 3 3 3 4 4 4 5 6 6 7 7 7 8 8 9 10 11 11 11 12 LCS_GDT S 125 S 125 3 6 10 0 3 3 4 4 6 7 7 8 8 8 8 8 8 9 10 11 11 12 12 LCS_GDT R 126 R 126 5 6 11 0 3 5 5 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT G 127 G 127 5 6 11 0 3 5 5 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT D 128 D 128 5 6 11 3 3 5 5 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT C 129 C 129 5 6 11 3 3 5 5 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT C 130 C 130 5 6 11 3 3 5 5 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT T 131 T 131 3 6 11 3 3 3 4 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT N 132 N 132 3 5 11 3 3 3 4 5 7 7 7 8 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT Y 133 Y 133 3 4 11 3 3 3 4 4 4 5 6 6 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT Q 134 Q 134 3 4 11 3 3 3 4 4 4 5 6 6 8 8 8 10 10 11 11 11 11 12 12 LCS_GDT V 135 V 135 3 3 11 0 3 3 3 3 4 5 6 6 8 8 9 10 10 11 11 11 11 12 12 LCS_GDT V 136 V 136 3 3 11 3 3 3 3 3 4 4 6 6 7 7 8 9 10 11 11 11 11 12 12 LCS_GDT C 137 C 137 3 4 9 3 3 3 4 4 4 4 5 5 7 7 8 8 9 9 10 11 11 12 12 LCS_GDT K 138 K 138 3 4 8 3 3 3 4 4 4 4 5 5 5 7 8 8 9 9 10 11 11 12 12 LCS_GDT G 139 G 139 3 4 7 0 3 3 4 4 4 4 5 5 5 5 7 7 9 9 10 10 11 12 12 LCS_GDT E 140 E 140 3 4 6 0 3 3 4 4 4 4 5 5 5 5 5 5 5 5 6 8 10 10 10 LCS_AVERAGE LCS_A: 13.86 ( 8.25 11.56 21.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 5 6 7 7 7 8 8 9 9 10 10 11 11 11 11 12 12 GDT PERCENT_AT 8.89 11.11 11.11 11.11 13.33 15.56 15.56 15.56 17.78 17.78 20.00 20.00 22.22 22.22 24.44 24.44 24.44 24.44 26.67 26.67 GDT RMS_LOCAL 0.34 0.69 0.69 0.69 1.39 2.20 2.20 2.20 2.71 2.71 4.07 4.07 4.44 4.44 4.91 4.91 4.91 4.91 5.49 5.49 GDT RMS_ALL_AT 69.97 69.75 69.75 69.75 69.48 57.71 57.71 57.71 57.38 57.38 70.69 70.69 59.09 59.09 59.61 59.61 59.61 59.61 59.36 59.36 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 113 E 113 # possible swapping detected: D 122 D 122 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 110.185 0 0.711 1.439 114.363 0.000 0.000 LGA A 97 A 97 107.040 0 0.143 0.139 107.756 0.000 0.000 LGA R 98 R 98 107.315 0 0.696 0.704 108.504 0.000 0.000 LGA G 99 G 99 104.555 0 0.241 0.241 105.317 0.000 0.000 LGA W 100 W 100 101.088 0 0.665 1.272 102.682 0.000 0.000 LGA E 101 E 101 99.431 0 0.112 1.080 104.707 0.000 0.000 LGA C 102 C 102 95.341 0 0.060 0.149 96.675 0.000 0.000 LGA T 103 T 103 94.227 0 0.036 1.236 94.411 0.000 0.000 LGA K 104 K 104 91.913 0 0.634 0.971 94.428 0.000 0.000 LGA D 105 D 105 87.062 0 0.667 1.310 89.108 0.000 0.000 LGA R 106 R 106 81.352 0 0.690 0.881 83.568 0.000 0.000 LGA C 107 C 107 76.909 0 0.145 0.740 78.849 0.000 0.000 LGA G 108 G 108 70.762 0 0.687 0.687 72.737 0.000 0.000 LGA E 109 E 109 66.801 0 0.016 0.926 68.430 0.000 0.000 LGA V 110 V 110 60.849 0 0.060 1.116 63.486 0.000 0.000 LGA R 111 R 111 55.853 0 0.091 1.280 57.291 0.000 0.000 LGA N 112 N 112 54.540 0 0.162 0.916 58.426 0.000 0.000 LGA E 113 E 113 49.376 0 0.699 1.206 51.054 0.000 0.000 LGA E 114 E 114 50.346 0 0.703 1.232 52.981 0.000 0.000 LGA N 115 N 115 48.083 0 0.039 0.985 48.697 0.000 0.000 LGA A 116 A 116 46.503 0 0.588 0.589 48.854 0.000 0.000 LGA C 117 C 117 41.749 0 0.073 0.186 43.683 0.000 0.000 LGA H 118 H 118 37.490 0 0.060 1.248 38.925 0.000 0.000 LGA C 119 C 119 34.921 0 0.603 0.931 36.819 0.000 0.000 LGA S 120 S 120 28.535 0 0.059 0.603 30.711 0.000 0.000 LGA E 121 E 121 23.238 0 0.680 1.361 25.380 0.000 0.000 LGA D 122 D 122 16.819 0 0.621 1.111 19.394 0.000 0.000 LGA C 123 C 123 15.553 0 0.646 0.805 19.859 0.000 0.000 LGA L 124 L 124 11.100 0 0.624 0.855 13.128 0.714 0.357 LGA S 125 S 125 5.913 0 0.699 0.815 7.447 32.976 25.873 LGA R 126 R 126 2.001 0 0.712 0.723 9.520 57.500 33.247 LGA G 127 G 127 2.974 0 0.365 0.365 4.167 54.048 54.048 LGA D 128 D 128 0.662 0 0.307 0.301 2.949 82.262 73.571 LGA C 129 C 129 1.997 0 0.064 0.140 2.723 75.000 69.048 LGA C 130 C 130 1.355 0 0.066 0.851 3.536 81.548 73.730 LGA T 131 T 131 2.657 0 0.676 0.594 5.402 61.667 52.313 LGA N 132 N 132 2.766 0 0.672 1.214 4.041 54.048 58.571 LGA Y 133 Y 133 8.351 0 0.584 0.781 19.587 4.881 1.627 LGA Q 134 Q 134 10.849 0 0.664 1.183 18.421 0.952 0.423 LGA V 135 V 135 9.134 0 0.604 0.630 10.319 0.476 2.381 LGA V 136 V 136 11.755 0 0.649 0.922 12.981 0.000 0.000 LGA C 137 C 137 16.969 0 0.710 1.055 21.046 0.000 0.000 LGA K 138 K 138 19.497 0 0.677 0.927 26.818 0.000 0.000 LGA G 139 G 139 19.177 0 0.721 0.721 20.892 0.000 0.000 LGA E 140 E 140 24.773 0 0.179 1.131 30.147 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 37.641 37.638 37.925 11.246 9.893 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 7 2.20 15.556 14.926 0.305 LGA_LOCAL RMSD: 2.198 Number of atoms: 7 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 57.714 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 37.641 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.399808 * X + -0.896598 * Y + 0.190437 * Z + -51.408211 Y_new = 0.645054 * X + 0.422831 * Y + 0.636490 * Z + 108.703041 Z_new = -0.651198 * X + -0.131632 * Y + 0.747405 * Z + -37.192265 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.015941 0.709162 -0.174331 [DEG: 58.2091 40.6320 -9.9884 ] ZXZ: 2.850872 0.726649 -1.770247 [DEG: 163.3429 41.6339 -101.4277 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS449_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS449_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 7 2.20 14.926 37.64 REMARK ---------------------------------------------------------- MOLECULE T0543TS449_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gso_A 3ism_A 1zm8_A 1g8t_A ATOM 728 N THR 96 105.224 29.280 -16.171 1.00347.79 N ATOM 729 CA THR 96 104.051 29.533 -16.952 1.00347.79 C ATOM 730 CB THR 96 103.590 28.345 -17.739 1.00347.79 C ATOM 731 OG1 THR 96 103.228 27.286 -16.864 1.00347.79 O ATOM 732 CG2 THR 96 104.753 27.894 -18.641 1.00347.79 C ATOM 733 C THR 96 102.944 29.881 -16.013 1.00347.79 C ATOM 734 O THR 96 102.967 29.501 -14.843 1.00347.79 O ATOM 735 N ALA 97 101.949 30.642 -16.507 1.00302.97 N ATOM 736 CA ALA 97 100.805 30.963 -15.705 1.00302.97 C ATOM 737 CB ALA 97 101.013 32.181 -14.790 1.00302.97 C ATOM 738 C ALA 97 99.704 31.304 -16.654 1.00302.97 C ATOM 739 O ALA 97 99.955 31.818 -17.744 1.00302.97 O ATOM 740 N ARG 98 98.444 31.011 -16.275 1.00341.14 N ATOM 741 CA ARG 98 97.368 31.344 -17.159 1.00341.14 C ATOM 742 CB ARG 98 97.121 30.305 -18.265 1.00341.14 C ATOM 743 CG ARG 98 98.160 30.343 -19.385 1.00341.14 C ATOM 744 CD ARG 98 98.186 31.673 -20.142 1.00341.14 C ATOM 745 NE ARG 98 96.819 31.906 -20.689 1.00341.14 N ATOM 746 CZ ARG 98 96.396 31.250 -21.809 1.00341.14 C ATOM 747 NH1 ARG 98 97.218 30.357 -22.434 1.00341.14 N ATOM 748 NH2 ARG 98 95.145 31.487 -22.300 1.00341.14 N ATOM 749 C ARG 98 96.106 31.435 -16.369 1.00341.14 C ATOM 750 O ARG 98 96.042 31.013 -15.216 1.00341.14 O ATOM 751 N GLY 99 95.067 32.030 -16.988 1.00124.54 N ATOM 752 CA GLY 99 93.776 32.129 -16.379 1.00124.54 C ATOM 753 C GLY 99 93.206 33.456 -16.757 1.00124.54 C ATOM 754 O GLY 99 93.872 34.484 -16.640 1.00124.54 O ATOM 755 N TRP 100 91.942 33.466 -17.229 1.00308.96 N ATOM 756 CA TRP 100 91.320 34.711 -17.570 1.00308.96 C ATOM 757 CB TRP 100 91.626 35.178 -19.004 1.00308.96 C ATOM 758 CG TRP 100 90.980 36.491 -19.382 1.00308.96 C ATOM 759 CD2 TRP 100 91.647 37.761 -19.309 1.00308.96 C ATOM 760 CD1 TRP 100 89.729 36.738 -19.864 1.00308.96 C ATOM 761 NE1 TRP 100 89.569 38.085 -20.086 1.00308.96 N ATOM 762 CE2 TRP 100 90.743 38.727 -19.751 1.00308.96 C ATOM 763 CE3 TRP 100 92.909 38.097 -18.910 1.00308.96 C ATOM 764 CZ2 TRP 100 91.089 40.047 -19.800 1.00308.96 C ATOM 765 CZ3 TRP 100 93.254 39.429 -18.957 1.00308.96 C ATOM 766 CH2 TRP 100 92.361 40.385 -19.394 1.00308.96 C ATOM 767 C TRP 100 89.842 34.493 -17.492 1.00308.96 C ATOM 768 O TRP 100 89.356 33.390 -17.735 1.00308.96 O ATOM 769 N GLU 101 89.084 35.542 -17.128 1.00308.03 N ATOM 770 CA GLU 101 87.656 35.411 -17.097 1.00308.03 C ATOM 771 CB GLU 101 87.093 34.823 -15.791 1.00308.03 C ATOM 772 CG GLU 101 87.407 35.656 -14.546 1.00308.03 C ATOM 773 CD GLU 101 88.792 35.256 -14.059 1.00308.03 C ATOM 774 OE1 GLU 101 89.410 34.368 -14.706 1.00308.03 O ATOM 775 OE2 GLU 101 89.248 35.829 -13.034 1.00308.03 O ATOM 776 C GLU 101 87.085 36.780 -17.250 1.00308.03 C ATOM 777 O GLU 101 87.763 37.774 -16.996 1.00308.03 O ATOM 778 N CYS 102 85.817 36.866 -17.699 1.00 81.66 N ATOM 779 CA CYS 102 85.199 38.150 -17.848 1.00 81.66 C ATOM 780 CB CYS 102 85.129 38.655 -19.298 1.00 81.66 C ATOM 781 SG CYS 102 86.764 38.849 -20.062 1.00 81.66 S ATOM 782 C CYS 102 83.783 38.039 -17.395 1.00 81.66 C ATOM 783 O CYS 102 83.242 36.944 -17.253 1.00 81.66 O ATOM 784 N THR 103 83.157 39.202 -17.133 1.00295.46 N ATOM 785 CA THR 103 81.773 39.239 -16.774 1.00295.46 C ATOM 786 CB THR 103 81.527 39.610 -15.343 1.00295.46 C ATOM 787 OG1 THR 103 80.136 39.554 -15.058 1.00295.46 O ATOM 788 CG2 THR 103 82.063 41.031 -15.104 1.00295.46 C ATOM 789 C THR 103 81.151 40.302 -17.619 1.00295.46 C ATOM 790 O THR 103 81.818 41.259 -18.013 1.00295.46 O ATOM 791 N LYS 104 79.852 40.152 -17.944 1.00229.19 N ATOM 792 CA LYS 104 79.209 41.148 -18.752 1.00229.19 C ATOM 793 CB LYS 104 78.764 40.621 -20.126 1.00229.19 C ATOM 794 CG LYS 104 77.752 39.474 -20.055 1.00229.19 C ATOM 795 CD LYS 104 77.092 39.161 -21.400 1.00229.19 C ATOM 796 CE LYS 104 76.326 40.344 -21.995 1.00229.19 C ATOM 797 NZ LYS 104 75.883 40.023 -23.371 1.00229.19 N ATOM 798 C LYS 104 77.995 41.616 -18.020 1.00229.19 C ATOM 799 O LYS 104 77.268 40.819 -17.429 1.00229.19 O ATOM 800 N ASP 105 77.755 42.941 -18.027 1.00191.28 N ATOM 801 CA ASP 105 76.608 43.457 -17.340 1.00191.28 C ATOM 802 CB ASP 105 76.940 44.564 -16.326 1.00191.28 C ATOM 803 CG ASP 105 77.847 43.980 -15.253 1.00191.28 C ATOM 804 OD1 ASP 105 78.408 42.875 -15.481 1.00191.28 O ATOM 805 OD2 ASP 105 77.988 44.634 -14.185 1.00191.28 O ATOM 806 C ASP 105 75.691 44.062 -18.353 1.00191.28 C ATOM 807 O ASP 105 76.092 44.931 -19.126 1.00191.28 O ATOM 808 N ARG 106 74.427 43.595 -18.383 1.00292.68 N ATOM 809 CA ARG 106 73.462 44.156 -19.281 1.00292.68 C ATOM 810 CB ARG 106 73.128 43.261 -20.486 1.00292.68 C ATOM 811 CG ARG 106 72.096 43.901 -21.413 1.00292.68 C ATOM 812 CD ARG 106 71.729 43.053 -22.630 1.00292.68 C ATOM 813 NE ARG 106 70.474 43.630 -23.190 1.00292.68 N ATOM 814 CZ ARG 106 70.340 43.828 -24.534 1.00292.68 C ATOM 815 NH1 ARG 106 71.375 43.539 -25.376 1.00292.68 N ATOM 816 NH2 ARG 106 69.169 44.320 -25.033 1.00292.68 N ATOM 817 C ARG 106 72.191 44.347 -18.516 1.00292.68 C ATOM 818 O ARG 106 71.892 43.584 -17.599 1.00292.68 O ATOM 819 N CYS 107 71.414 45.394 -18.864 1.00108.42 N ATOM 820 CA CYS 107 70.171 45.616 -18.181 1.00108.42 C ATOM 821 CB CYS 107 70.286 46.613 -17.013 1.00108.42 C ATOM 822 SG CYS 107 68.706 46.890 -16.153 1.00108.42 S ATOM 823 C CYS 107 69.199 46.193 -19.166 1.00108.42 C ATOM 824 O CYS 107 69.592 46.733 -20.199 1.00108.42 O ATOM 825 N GLY 108 67.888 46.073 -18.863 1.00126.34 N ATOM 826 CA GLY 108 66.851 46.623 -19.692 1.00126.34 C ATOM 827 C GLY 108 65.709 46.943 -18.779 1.00126.34 C ATOM 828 O GLY 108 65.548 46.303 -17.741 1.00126.34 O ATOM 829 N GLU 109 64.872 47.940 -19.137 1.00240.56 N ATOM 830 CA GLU 109 63.810 48.281 -18.233 1.00240.56 C ATOM 831 CB GLU 109 64.181 49.449 -17.305 1.00240.56 C ATOM 832 CG GLU 109 65.409 49.140 -16.446 1.00240.56 C ATOM 833 CD GLU 109 65.915 50.438 -15.832 1.00240.56 C ATOM 834 OE1 GLU 109 65.067 51.258 -15.390 1.00240.56 O ATOM 835 OE2 GLU 109 67.162 50.619 -15.786 1.00240.56 O ATOM 836 C GLU 109 62.603 48.697 -19.016 1.00240.56 C ATOM 837 O GLU 109 62.700 49.093 -20.178 1.00240.56 O ATOM 838 N VAL 110 61.416 48.578 -18.382 1.00148.95 N ATOM 839 CA VAL 110 60.180 48.976 -18.990 1.00148.95 C ATOM 840 CB VAL 110 59.457 47.837 -19.643 1.00148.95 C ATOM 841 CG1 VAL 110 60.368 47.255 -20.737 1.00148.95 C ATOM 842 CG2 VAL 110 59.066 46.816 -18.561 1.00148.95 C ATOM 843 C VAL 110 59.300 49.495 -17.893 1.00148.95 C ATOM 844 O VAL 110 59.432 49.089 -16.739 1.00148.95 O ATOM 845 N ARG 111 58.390 50.438 -18.222 1.00329.61 N ATOM 846 CA ARG 111 57.506 50.974 -17.222 1.00329.61 C ATOM 847 CB ARG 111 58.220 51.974 -16.295 1.00329.61 C ATOM 848 CG ARG 111 58.867 53.140 -17.048 1.00329.61 C ATOM 849 CD ARG 111 57.908 54.235 -17.511 1.00329.61 C ATOM 850 NE ARG 111 58.681 55.125 -18.424 1.00329.61 N ATOM 851 CZ ARG 111 59.566 56.036 -17.921 1.00329.61 C ATOM 852 NH1 ARG 111 59.751 56.140 -16.573 1.00329.61 N ATOM 853 NH2 ARG 111 60.274 56.837 -18.769 1.00329.61 N ATOM 854 C ARG 111 56.353 51.658 -17.895 1.00329.61 C ATOM 855 O ARG 111 56.513 52.258 -18.957 1.00329.61 O ATOM 856 N ASN 112 55.144 51.567 -17.293 1.00278.73 N ATOM 857 CA ASN 112 53.984 52.218 -17.841 1.00278.73 C ATOM 858 CB ASN 112 53.134 51.322 -18.761 1.00278.73 C ATOM 859 CG ASN 112 52.640 50.129 -17.959 1.00278.73 C ATOM 860 OD1 ASN 112 53.428 49.290 -17.526 1.00278.73 O ATOM 861 ND2 ASN 112 51.298 50.050 -17.752 1.00278.73 N ATOM 862 C ASN 112 53.112 52.667 -16.701 1.00278.73 C ATOM 863 O ASN 112 53.207 52.144 -15.593 1.00278.73 O ATOM 864 N GLU 113 52.247 53.673 -16.948 1.00296.91 N ATOM 865 CA GLU 113 51.400 54.196 -15.909 1.00296.91 C ATOM 866 CB GLU 113 52.043 55.401 -15.200 1.00296.91 C ATOM 867 CG GLU 113 51.205 56.023 -14.084 1.00296.91 C ATOM 868 CD GLU 113 52.042 57.140 -13.474 1.00296.91 C ATOM 869 OE1 GLU 113 53.261 57.194 -13.791 1.00296.91 O ATOM 870 OE2 GLU 113 51.484 57.946 -12.683 1.00296.91 O ATOM 871 C GLU 113 50.112 54.653 -16.530 1.00296.91 C ATOM 872 O GLU 113 50.048 54.870 -17.738 1.00296.91 O ATOM 873 N GLU 114 49.034 54.773 -15.719 1.00298.55 N ATOM 874 CA GLU 114 47.783 55.259 -16.245 1.00298.55 C ATOM 875 CB GLU 114 46.800 54.163 -16.694 1.00298.55 C ATOM 876 CG GLU 114 46.179 53.365 -15.548 1.00298.55 C ATOM 877 CD GLU 114 45.020 52.572 -16.134 1.00298.55 C ATOM 878 OE1 GLU 114 45.100 52.216 -17.340 1.00298.55 O ATOM 879 OE2 GLU 114 44.039 52.311 -15.387 1.00298.55 O ATOM 880 C GLU 114 47.088 56.044 -15.170 1.00298.55 C ATOM 881 O GLU 114 47.352 55.857 -13.983 1.00298.55 O ATOM 882 N ASN 115 46.180 56.963 -15.570 1.00349.86 N ATOM 883 CA ASN 115 45.472 57.785 -14.625 1.00349.86 C ATOM 884 CB ASN 115 45.904 59.261 -14.679 1.00349.86 C ATOM 885 CG ASN 115 45.048 60.047 -13.699 1.00349.86 C ATOM 886 OD1 ASN 115 45.952 59.220 -13.598 1.00349.86 O ATOM 887 ND2 ASN 115 44.362 60.674 -14.692 1.00349.86 N ATOM 888 C ASN 115 44.007 57.772 -14.940 1.00349.86 C ATOM 889 O ASN 115 43.615 57.780 -16.106 1.00349.86 O ATOM 890 N ALA 116 43.151 57.731 -13.894 1.00293.66 N ATOM 891 CA ALA 116 41.736 57.809 -14.134 1.00293.66 C ATOM 892 CB ALA 116 41.213 56.731 -15.097 1.00293.66 C ATOM 893 C ALA 116 41.007 57.627 -12.838 1.00293.66 C ATOM 894 O ALA 116 41.542 57.069 -11.881 1.00293.66 O ATOM 895 N CYS 117 39.754 58.128 -12.780 1.00147.24 N ATOM 896 CA CYS 117 38.904 57.948 -11.637 1.00147.24 C ATOM 897 CB CYS 117 39.478 58.499 -10.318 1.00147.24 C ATOM 898 SG CYS 117 39.794 60.288 -10.357 1.00147.24 S ATOM 899 C CYS 117 37.624 58.670 -11.923 1.00147.24 C ATOM 900 O CYS 117 37.602 59.611 -12.714 1.00147.24 O ATOM 901 N HIS 118 36.508 58.236 -11.297 1.00280.26 N ATOM 902 CA HIS 118 35.258 58.899 -11.547 1.00280.26 C ATOM 903 ND1 HIS 118 32.866 59.721 -13.870 1.00280.26 N ATOM 904 CG HIS 118 33.066 58.839 -12.832 1.00280.26 C ATOM 905 CB HIS 118 34.371 58.151 -12.557 1.00280.26 C ATOM 906 NE2 HIS 118 30.931 59.566 -12.787 1.00280.26 N ATOM 907 CD2 HIS 118 31.874 58.756 -12.181 1.00280.26 C ATOM 908 CE1 HIS 118 31.573 60.126 -13.796 1.00280.26 C ATOM 909 C HIS 118 34.486 58.972 -10.267 1.00280.26 C ATOM 910 O HIS 118 34.525 58.047 -9.456 1.00280.26 O ATOM 911 N CYS 119 33.776 60.099 -10.042 1.00118.23 N ATOM 912 CA CYS 119 32.957 60.221 -8.869 1.00118.23 C ATOM 913 CB CYS 119 33.742 60.540 -7.585 1.00118.23 C ATOM 914 SG CYS 119 34.637 62.119 -7.687 1.00118.23 S ATOM 915 C CYS 119 32.001 61.353 -9.087 1.00118.23 C ATOM 916 O CYS 119 32.250 62.243 -9.898 1.00118.23 O ATOM 917 N SER 120 30.861 61.331 -8.365 1.00203.78 N ATOM 918 CA SER 120 29.895 62.388 -8.464 1.00203.78 C ATOM 919 CB SER 120 28.633 61.999 -9.258 1.00203.78 C ATOM 920 OG SER 120 28.980 61.635 -10.586 1.00203.78 O ATOM 921 C SER 120 29.456 62.697 -7.070 1.00203.78 C ATOM 922 O SER 120 29.465 61.825 -6.203 1.00203.78 O ATOM 923 N GLU 121 29.078 63.962 -6.801 1.00275.86 N ATOM 924 CA GLU 121 28.646 64.292 -5.474 1.00275.86 C ATOM 925 CB GLU 121 29.716 65.014 -4.636 1.00275.86 C ATOM 926 CG GLU 121 29.236 65.370 -3.227 1.00275.86 C ATOM 927 CD GLU 121 30.382 66.046 -2.485 1.00275.86 C ATOM 928 OE1 GLU 121 31.545 65.596 -2.667 1.00275.86 O ATOM 929 OE2 GLU 121 30.111 67.006 -1.717 1.00275.86 O ATOM 930 C GLU 121 27.465 65.201 -5.566 1.00275.86 C ATOM 931 O GLU 121 27.385 66.047 -6.455 1.00275.86 O ATOM 932 N ASP 122 26.500 65.019 -4.643 1.00193.65 N ATOM 933 CA ASP 122 25.335 65.853 -4.608 1.00193.65 C ATOM 934 CB ASP 122 24.027 65.072 -4.835 1.00193.65 C ATOM 935 CG ASP 122 22.916 66.066 -5.147 1.00193.65 C ATOM 936 OD1 ASP 122 23.115 67.281 -4.883 1.00193.65 O ATOM 937 OD2 ASP 122 21.854 65.619 -5.654 1.00193.65 O ATOM 938 C ASP 122 25.274 66.449 -3.238 1.00193.65 C ATOM 939 O ASP 122 25.329 65.728 -2.242 1.00193.65 O ATOM 940 N CYS 123 25.181 67.790 -3.140 1.00 65.38 N ATOM 941 CA CYS 123 25.129 68.384 -1.834 1.00 65.38 C ATOM 942 CB CYS 123 26.173 69.494 -1.614 1.00 65.38 C ATOM 943 SG CYS 123 27.884 68.912 -1.806 1.00 65.38 S ATOM 944 C CYS 123 23.790 69.022 -1.659 1.00 65.38 C ATOM 945 O CYS 123 23.377 69.857 -2.462 1.00 65.38 O ATOM 946 N LEU 124 23.057 68.620 -0.601 1.00233.13 N ATOM 947 CA LEU 124 21.797 69.251 -0.352 1.00233.13 C ATOM 948 CB LEU 124 20.596 68.453 -0.906 1.00233.13 C ATOM 949 CG LEU 124 19.233 69.189 -0.922 1.00233.13 C ATOM 950 CD1 LEU 124 18.139 68.275 -1.495 1.00233.13 C ATOM 951 CD2 LEU 124 18.833 69.771 0.444 1.00233.13 C ATOM 952 C LEU 124 21.653 69.337 1.133 1.00233.13 C ATOM 953 O LEU 124 21.782 68.335 1.835 1.00233.13 O ATOM 954 N SER 125 21.400 70.556 1.650 1.00189.75 N ATOM 955 CA SER 125 21.170 70.722 3.054 1.00189.75 C ATOM 956 CB SER 125 22.446 71.010 3.864 1.00189.75 C ATOM 957 OG SER 125 22.130 71.161 5.240 1.00189.75 O ATOM 958 C SER 125 20.272 71.905 3.206 1.00189.75 C ATOM 959 O SER 125 20.427 72.903 2.504 1.00189.75 O ATOM 960 N ARG 126 19.293 71.817 4.125 1.00264.47 N ATOM 961 CA ARG 126 18.402 72.920 4.333 1.00264.47 C ATOM 962 CB ARG 126 17.248 73.011 3.325 1.00264.47 C ATOM 963 CG ARG 126 17.585 73.551 1.937 1.00264.47 C ATOM 964 CD ARG 126 16.296 73.852 1.168 1.00264.47 C ATOM 965 NE ARG 126 16.622 74.541 -0.109 1.00264.47 N ATOM 966 CZ ARG 126 15.627 75.239 -0.731 1.00264.47 C ATOM 967 NH1 ARG 126 14.400 75.328 -0.138 1.00264.47 N ATOM 968 NH2 ARG 126 15.850 75.846 -1.933 1.00264.47 N ATOM 969 C ARG 126 17.720 72.721 5.642 1.00264.47 C ATOM 970 O ARG 126 17.858 71.676 6.278 1.00264.47 O ATOM 971 N GLY 127 16.976 73.755 6.082 1.00113.99 N ATOM 972 CA GLY 127 16.173 73.650 7.263 1.00113.99 C ATOM 973 C GLY 127 15.977 75.025 7.810 1.00113.99 C ATOM 974 O GLY 127 16.880 75.581 8.433 1.00113.99 O ATOM 975 N ASP 128 14.782 75.617 7.592 1.00210.68 N ATOM 976 CA ASP 128 14.510 76.911 8.150 1.00210.68 C ATOM 977 CB ASP 128 15.622 77.950 7.872 1.00210.68 C ATOM 978 CG ASP 128 15.805 78.146 6.371 1.00210.68 C ATOM 979 OD1 ASP 128 15.183 77.375 5.593 1.00210.68 O ATOM 980 OD2 ASP 128 16.572 79.068 5.985 1.00210.68 O ATOM 981 C ASP 128 13.185 77.412 7.655 1.00210.68 C ATOM 982 O ASP 128 13.109 78.257 6.764 1.00210.68 O ATOM 983 N CYS 129 12.080 76.907 8.235 1.00 46.90 N ATOM 984 CA CYS 129 10.805 77.386 7.789 1.00 46.90 C ATOM 985 CB CYS 129 9.986 76.345 7.003 1.00 46.90 C ATOM 986 SG CYS 129 10.827 75.768 5.498 1.00 46.90 S ATOM 987 C CYS 129 9.989 77.773 8.979 1.00 46.90 C ATOM 988 O CYS 129 9.816 76.995 9.916 1.00 46.90 O ATOM 989 N CYS 130 9.477 79.019 8.971 1.00 95.96 N ATOM 990 CA CYS 130 8.598 79.469 10.009 1.00 95.96 C ATOM 991 CB CYS 130 9.254 80.452 10.993 1.00 95.96 C ATOM 992 SG CYS 130 8.108 80.999 12.293 1.00 95.96 S ATOM 993 C CYS 130 7.515 80.199 9.286 1.00 95.96 C ATOM 994 O CYS 130 7.791 80.922 8.330 1.00 95.96 O ATOM 995 N THR 131 6.245 80.032 9.700 1.00302.66 N ATOM 996 CA THR 131 5.224 80.687 8.935 1.00302.66 C ATOM 997 CB THR 131 4.455 79.747 8.059 1.00302.66 C ATOM 998 OG1 THR 131 3.808 78.766 8.855 1.00302.66 O ATOM 999 CG2 THR 131 5.438 79.065 7.093 1.00302.66 C ATOM 1000 C THR 131 4.224 81.298 9.860 1.00302.66 C ATOM 1001 O THR 131 4.180 80.989 11.049 1.00302.66 O ATOM 1002 N ASN 132 3.409 82.220 9.309 1.00246.08 N ATOM 1003 CA ASN 132 2.338 82.833 10.036 1.00246.08 C ATOM 1004 CB ASN 132 2.591 84.300 10.427 1.00246.08 C ATOM 1005 CG ASN 132 3.742 84.354 11.418 1.00246.08 C ATOM 1006 OD1 ASN 132 3.801 83.575 12.368 1.00246.08 O ATOM 1007 ND2 ASN 132 4.685 85.307 11.194 1.00246.08 N ATOM 1008 C ASN 132 1.173 82.860 9.103 1.00246.08 C ATOM 1009 O ASN 132 1.342 82.996 7.892 1.00246.08 O ATOM 1010 N TYR 133 -0.051 82.700 9.637 1.00348.22 N ATOM 1011 CA TYR 133 -1.189 82.793 8.773 1.00348.22 C ATOM 1012 CB TYR 133 -1.952 81.464 8.598 1.00348.22 C ATOM 1013 CG TYR 133 -2.445 80.966 9.915 1.00348.22 C ATOM 1014 CD1 TYR 133 -1.641 80.152 10.679 1.00348.22 C ATOM 1015 CD2 TYR 133 -3.696 81.294 10.387 1.00348.22 C ATOM 1016 CE1 TYR 133 -2.071 79.671 11.892 1.00348.22 C ATOM 1017 CE2 TYR 133 -4.133 80.816 11.601 1.00348.22 C ATOM 1018 CZ TYR 133 -3.320 80.003 12.356 1.00348.22 C ATOM 1019 OH TYR 133 -3.764 79.509 13.602 1.00348.22 O ATOM 1020 C TYR 133 -2.097 83.843 9.316 1.00348.22 C ATOM 1021 O TYR 133 -2.502 83.796 10.476 1.00348.22 O ATOM 1022 N GLN 134 -2.414 84.845 8.470 1.00277.65 N ATOM 1023 CA GLN 134 -3.264 85.933 8.856 1.00277.65 C ATOM 1024 CB GLN 134 -2.503 87.250 9.098 1.00277.65 C ATOM 1025 CG GLN 134 -1.666 87.286 10.377 1.00277.65 C ATOM 1026 CD GLN 134 -2.584 87.672 11.527 1.00277.65 C ATOM 1027 OE1 GLN 134 -3.573 86.996 11.811 1.00277.65 O ATOM 1028 NE2 GLN 134 -2.255 88.803 12.206 1.00277.65 N ATOM 1029 C GLN 134 -4.167 86.214 7.701 1.00277.65 C ATOM 1030 O GLN 134 -3.862 85.862 6.563 1.00277.65 O ATOM 1031 N VAL 135 -5.331 86.830 7.978 1.00 61.88 N ATOM 1032 CA VAL 135 -6.193 87.224 6.905 1.00 61.88 C ATOM 1033 CB VAL 135 -7.260 86.220 6.587 1.00 61.88 C ATOM 1034 CG1 VAL 135 -8.150 86.789 5.468 1.00 61.88 C ATOM 1035 CG2 VAL 135 -6.578 84.893 6.214 1.00 61.88 C ATOM 1036 C VAL 135 -6.878 88.480 7.322 1.00 61.88 C ATOM 1037 O VAL 135 -7.350 88.597 8.452 1.00 61.88 O ATOM 1038 N VAL 136 -6.931 89.475 6.418 1.00 89.11 N ATOM 1039 CA VAL 136 -7.650 90.662 6.752 1.00 89.11 C ATOM 1040 CB VAL 136 -6.794 91.767 7.301 1.00 89.11 C ATOM 1041 CG1 VAL 136 -5.759 92.164 6.235 1.00 89.11 C ATOM 1042 CG2 VAL 136 -7.712 92.919 7.746 1.00 89.11 C ATOM 1043 C VAL 136 -8.264 91.170 5.493 1.00 89.11 C ATOM 1044 O VAL 136 -7.619 91.210 4.446 1.00 89.11 O ATOM 1045 N CYS 137 -9.547 91.564 5.572 1.00 87.95 N ATOM 1046 CA CYS 137 -10.209 92.123 4.435 1.00 87.95 C ATOM 1047 CB CYS 137 -11.577 91.478 4.143 1.00 87.95 C ATOM 1048 SG CYS 137 -12.746 91.672 5.520 1.00 87.95 S ATOM 1049 C CYS 137 -10.428 93.557 4.779 1.00 87.95 C ATOM 1050 O CYS 137 -10.766 93.883 5.915 1.00 87.95 O ATOM 1051 N LYS 138 -10.212 94.461 3.807 1.00254.98 N ATOM 1052 CA LYS 138 -10.347 95.853 4.117 1.00254.98 C ATOM 1053 CB LYS 138 -8.994 96.576 4.222 1.00254.98 C ATOM 1054 CG LYS 138 -9.101 98.050 4.616 1.00254.98 C ATOM 1055 CD LYS 138 -9.523 98.264 6.070 1.00254.98 C ATOM 1056 CE LYS 138 -10.971 97.863 6.355 1.00254.98 C ATOM 1057 NZ LYS 138 -11.285 98.103 7.780 1.00254.98 N ATOM 1058 C LYS 138 -11.111 96.500 3.011 1.00254.98 C ATOM 1059 O LYS 138 -11.343 95.900 1.962 1.00254.98 O ATOM 1060 N GLY 139 -11.553 97.750 3.242 1.00127.38 N ATOM 1061 CA GLY 139 -12.254 98.463 2.218 1.00127.38 C ATOM 1062 C GLY 139 -12.681 99.771 2.793 1.00127.38 C ATOM 1063 O GLY 139 -12.846 99.909 4.004 1.00127.38 O ATOM 1064 N GLU 140 -12.859 100.779 1.918 1.00222.29 N ATOM 1065 CA GLU 140 -13.312 102.055 2.377 1.00222.29 C ATOM 1066 CB GLU 140 -12.199 103.118 2.406 1.00222.29 C ATOM 1067 CG GLU 140 -11.571 103.399 1.039 1.00222.29 C ATOM 1068 CD GLU 140 -10.426 104.385 1.238 1.00222.29 C ATOM 1069 OE1 GLU 140 -10.070 104.651 2.418 1.00222.29 O ATOM 1070 OE2 GLU 140 -9.887 104.879 0.212 1.00222.29 O ATOM 1071 C GLU 140 -14.350 102.505 1.405 1.00222.29 C ATOM 1072 O GLU 140 -14.103 102.549 0.201 1.00222.29 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 102.01 20.5 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 109.36 14.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 81.88 34.6 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 106.37 20.5 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 107.23 19.4 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 104.96 23.1 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 109.13 15.4 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.22 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 84.82 38.9 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 86.88 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 53.36 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.87 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 76.97 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 75.63 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 88.79 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.56 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 83.56 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 99.17 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 35.74 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 37.64 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 37.64 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.8365 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 40.67 32 100.0 32 CRMSCA BURIED . . . . . . . . 28.85 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 37.55 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 40.60 156 100.0 156 CRMSMC BURIED . . . . . . . . 28.94 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 38.29 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 39.06 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 41.26 112 100.0 112 CRMSSC BURIED . . . . . . . . 31.09 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 37.95 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 40.95 240 100.0 240 CRMSALL BURIED . . . . . . . . 29.99 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 183.617 0.688 0.718 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 180.475 0.660 0.692 32 100.0 32 ERRCA BURIED . . . . . . . . 191.351 0.758 0.780 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 185.445 0.692 0.720 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 183.023 0.664 0.694 156 100.0 156 ERRMC BURIED . . . . . . . . 191.259 0.758 0.780 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 218.144 0.736 0.758 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 220.931 0.739 0.764 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 210.689 0.710 0.735 112 100.0 112 ERRSC BURIED . . . . . . . . 233.899 0.790 0.809 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 200.142 0.711 0.737 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 194.591 0.683 0.712 240 100.0 240 ERRALL BURIED . . . . . . . . 212.830 0.774 0.795 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 7 45 45 DISTCA CA (P) 0.00 0.00 0.00 0.00 15.56 45 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.01 DISTCA ALL (N) 0 0 0 0 48 345 345 DISTALL ALL (P) 0.00 0.00 0.00 0.00 13.91 345 DISTALL ALL (RMS) 0.00 0.00 0.00 0.00 7.94 DISTALL END of the results output