####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS423_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS423_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.50 2.50 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 98 - 139 1.97 2.54 LCS_AVERAGE: 89.09 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 115 - 139 0.91 2.86 LCS_AVERAGE: 41.98 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 4 45 3 3 3 16 24 28 35 42 42 42 44 44 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 7 45 3 3 4 6 13 17 25 34 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 42 45 3 3 4 10 17 24 32 34 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 13 42 45 6 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 13 42 45 6 15 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 13 42 45 4 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 13 42 45 9 17 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 13 42 45 4 15 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 13 42 45 4 5 5 22 28 35 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 12 42 45 5 16 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 8 42 45 3 5 12 18 23 32 38 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 24 42 45 3 13 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 25 42 45 3 13 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 25 42 45 6 19 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 25 42 45 8 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 25 42 45 5 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 25 42 45 4 19 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 25 42 45 4 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 25 42 45 7 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 25 42 45 9 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 25 42 45 10 20 25 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 25 42 45 10 20 25 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 25 42 45 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 25 42 45 10 20 26 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 25 42 45 10 17 25 33 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 25 42 45 4 16 24 33 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 29 45 3 3 3 3 4 5 7 8 34 37 40 42 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 77.02 ( 41.98 89.09 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 20 28 37 39 39 40 42 42 43 44 44 45 45 45 45 45 45 45 45 GDT PERCENT_AT 22.22 44.44 62.22 82.22 86.67 86.67 88.89 93.33 93.33 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.28 0.68 1.12 1.38 1.48 1.48 1.60 1.90 1.90 2.14 2.26 2.26 2.50 2.50 2.50 2.50 2.50 2.50 2.50 2.50 GDT RMS_ALL_AT 3.67 2.90 2.69 2.59 2.60 2.60 2.58 2.57 2.57 2.53 2.52 2.52 2.50 2.50 2.50 2.50 2.50 2.50 2.50 2.50 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 4.829 0 0.724 0.877 6.781 31.310 34.694 LGA A 97 A 97 6.363 0 0.163 0.176 8.208 24.048 20.190 LGA R 98 R 98 6.561 0 0.669 1.124 19.177 26.190 9.654 LGA G 99 G 99 2.047 0 0.423 0.423 2.990 62.857 62.857 LGA W 100 W 100 2.048 0 0.188 0.318 5.303 68.810 48.367 LGA E 101 E 101 1.653 0 0.109 0.197 2.898 72.857 68.413 LGA C 102 C 102 1.394 0 0.070 0.157 1.812 77.143 78.651 LGA T 103 T 103 1.830 0 0.045 0.168 2.270 72.857 70.544 LGA K 104 K 104 1.852 0 0.051 1.133 4.178 72.857 73.175 LGA D 105 D 105 1.983 0 0.143 1.004 5.314 70.833 57.619 LGA R 106 R 106 1.076 0 0.149 1.102 4.189 81.429 72.641 LGA C 107 C 107 1.553 0 0.043 0.064 1.829 79.286 77.143 LGA G 108 G 108 1.638 0 0.149 0.149 1.638 75.000 75.000 LGA E 109 E 109 1.349 0 0.069 0.823 3.495 79.286 66.508 LGA V 110 V 110 1.510 0 0.647 0.902 3.403 67.262 64.150 LGA R 111 R 111 3.536 0 0.046 1.356 13.444 52.143 21.861 LGA N 112 N 112 1.309 0 0.074 1.385 7.100 77.381 54.286 LGA E 113 E 113 4.411 0 0.286 1.054 12.116 48.571 23.598 LGA E 114 E 114 1.753 0 0.584 0.743 7.127 66.905 46.931 LGA N 115 N 115 1.918 0 0.117 0.658 4.797 72.857 60.298 LGA A 116 A 116 1.718 0 0.140 0.148 2.341 77.143 74.667 LGA C 117 C 117 1.478 0 0.060 0.117 1.951 77.143 75.714 LGA H 118 H 118 1.488 0 0.052 1.044 3.044 77.143 70.714 LGA C 119 C 119 1.218 0 0.056 0.148 1.460 81.429 81.429 LGA S 120 S 120 0.672 0 0.097 0.177 1.361 92.857 90.556 LGA E 121 E 121 0.467 0 0.104 0.900 3.478 95.238 83.651 LGA D 122 D 122 0.130 0 0.142 1.182 4.091 97.619 84.167 LGA C 123 C 123 0.306 0 0.086 0.090 1.125 92.976 95.317 LGA L 124 L 124 1.554 0 0.067 1.415 5.031 75.238 69.583 LGA S 125 S 125 1.789 0 0.157 0.181 2.454 72.976 72.937 LGA R 126 R 126 1.774 0 0.150 1.029 3.009 70.833 71.602 LGA G 127 G 127 1.391 0 0.112 0.112 1.406 81.429 81.429 LGA D 128 D 128 1.315 0 0.121 1.252 4.061 81.429 71.726 LGA C 129 C 129 1.481 0 0.105 0.281 1.664 81.429 80.000 LGA C 130 C 130 1.221 0 0.101 0.191 1.757 79.286 80.000 LGA T 131 T 131 1.053 0 0.091 0.096 1.177 83.690 82.721 LGA N 132 N 132 1.108 0 0.191 1.231 5.125 81.548 65.119 LGA Y 133 Y 133 1.106 0 0.102 0.363 1.515 81.429 81.468 LGA Q 134 Q 134 1.644 0 0.066 0.235 3.166 75.000 66.878 LGA V 135 V 135 1.756 0 0.036 0.040 1.887 72.857 72.857 LGA V 136 V 136 1.240 0 0.106 0.118 1.475 81.429 84.014 LGA C 137 C 137 1.304 0 0.174 0.182 2.508 73.214 74.524 LGA K 138 K 138 2.479 0 0.211 0.264 5.876 61.190 45.556 LGA G 139 G 139 3.094 0 0.717 0.717 4.650 43.929 43.929 LGA E 140 E 140 7.858 0 0.108 0.372 12.331 9.048 4.497 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.498 2.427 3.981 70.608 64.258 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.90 80.000 85.459 2.098 LGA_LOCAL RMSD: 1.902 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.570 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.498 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.917605 * X + 0.080472 * Y + -0.389261 * Z + 20.278896 Y_new = -0.338436 * X + 0.355446 * Y + 0.871275 * Z + 66.511848 Z_new = 0.208474 * X + 0.931226 * Y + -0.298925 * Z + 32.010933 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.788247 -0.210015 1.881407 [DEG: -159.7548 -12.0330 107.7967 ] ZXZ: -2.721426 1.874362 0.220239 [DEG: -155.9262 107.3930 12.6188 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS423_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS423_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.90 85.459 2.50 REMARK ---------------------------------------------------------- MOLECULE T0543TS423_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 14.917 90.071 21.114 1.00 30.00 N ATOM 729 CA THR 96 14.660 88.734 21.540 1.00 30.00 C ATOM 730 C THR 96 13.267 88.472 21.071 1.00 30.00 C ATOM 731 O THR 96 12.681 89.317 20.398 1.00 30.00 O ATOM 732 CB THR 96 14.828 88.586 23.063 1.00 30.00 C ATOM 733 OG1 THR 96 14.822 87.196 23.415 1.00 30.00 O ATOM 734 CG2 THR 96 13.687 89.276 23.795 1.00 30.00 C ATOM 735 N ALA 97 12.721 87.292 21.424 1.00 30.00 N ATOM 736 CA ALA 97 11.385 86.854 21.148 1.00 30.00 C ATOM 737 C ALA 97 11.463 85.862 20.050 1.00 30.00 C ATOM 738 O ALA 97 12.421 85.845 19.276 1.00 30.00 O ATOM 739 CB ALA 97 10.502 88.039 20.788 1.00 30.00 C ATOM 740 N ARG 98 10.439 85.000 19.957 1.00 30.00 N ATOM 741 CA ARG 98 10.441 84.033 18.911 1.00 30.00 C ATOM 742 C ARG 98 9.992 84.783 17.712 1.00 30.00 C ATOM 743 O ARG 98 9.131 85.658 17.809 1.00 30.00 O ATOM 744 CB ARG 98 9.534 82.854 19.271 1.00 30.00 C ATOM 745 CG ARG 98 10.031 82.022 20.442 1.00 30.00 C ATOM 746 CD ARG 98 9.141 80.813 20.677 1.00 30.00 C ATOM 747 NE ARG 98 9.569 80.038 21.840 1.00 30.00 N ATOM 748 CZ ARG 98 10.502 79.092 21.804 1.00 30.00 C ATOM 749 NH1 ARG 98 10.827 78.439 22.911 1.00 30.00 H ATOM 750 NH2 ARG 98 11.110 78.802 20.662 1.00 30.00 H ATOM 751 N GLY 99 10.558 84.469 16.539 1.00 28.84 N ATOM 752 CA GLY 99 10.087 85.139 15.370 1.00 28.84 C ATOM 753 C GLY 99 9.862 84.069 14.350 1.00 28.84 C ATOM 754 O GLY 99 10.679 83.848 13.459 1.00 28.84 O ATOM 755 N TRP 100 8.716 83.380 14.481 1.00 26.89 N ATOM 756 CA TRP 100 8.297 82.298 13.642 1.00 26.89 C ATOM 757 C TRP 100 7.879 82.804 12.296 1.00 26.89 C ATOM 758 O TRP 100 7.933 82.073 11.309 1.00 26.89 O ATOM 759 CB TRP 100 7.151 81.524 14.297 1.00 26.89 C ATOM 760 CG TRP 100 7.577 80.708 15.479 1.00 26.89 C ATOM 761 CD1 TRP 100 7.320 80.972 16.793 1.00 26.89 C ATOM 762 CD2 TRP 100 8.337 79.493 15.453 1.00 26.89 C ATOM 763 NE1 TRP 100 7.872 79.997 17.589 1.00 26.89 N ATOM 764 CE2 TRP 100 8.502 79.077 16.787 1.00 26.89 C ATOM 765 CE3 TRP 100 8.894 78.717 14.433 1.00 26.89 C ATOM 766 CZ2 TRP 100 9.201 77.920 17.129 1.00 26.89 C ATOM 767 CZ3 TRP 100 9.585 77.570 14.776 1.00 26.89 C ATOM 768 CH2 TRP 100 9.734 77.180 16.111 1.00 26.89 H ATOM 769 N GLU 101 7.449 84.078 12.220 1.00 28.46 N ATOM 770 CA GLU 101 6.892 84.596 10.999 1.00 28.46 C ATOM 771 C GLU 101 7.899 85.420 10.250 1.00 28.46 C ATOM 772 O GLU 101 8.935 85.808 10.785 1.00 28.46 O ATOM 773 CB GLU 101 5.645 85.431 11.292 1.00 28.46 C ATOM 774 CG GLU 101 4.497 84.643 11.902 1.00 28.46 C ATOM 775 CD GLU 101 3.275 85.500 12.165 1.00 28.46 C ATOM 776 OE1 GLU 101 3.359 86.731 11.967 1.00 28.46 O ATOM 777 OE2 GLU 101 2.234 84.941 12.568 1.00 28.46 O ATOM 778 N CYS 102 7.592 85.704 8.961 1.00 30.00 N ATOM 779 CA CYS 102 8.398 86.560 8.133 1.00 30.00 C ATOM 780 C CYS 102 7.589 87.769 7.822 1.00 30.00 C ATOM 781 O CYS 102 6.373 87.789 8.006 1.00 30.00 O ATOM 782 CB CYS 102 8.837 85.822 6.867 1.00 30.00 C ATOM 783 SG CYS 102 9.845 84.352 7.171 1.00 30.00 S ATOM 784 N THR 103 8.264 88.825 7.331 1.00 30.00 N ATOM 785 CA THR 103 7.516 89.976 6.952 1.00 30.00 C ATOM 786 C THR 103 7.785 90.227 5.502 1.00 30.00 C ATOM 787 O THR 103 8.728 89.682 4.932 1.00 30.00 O ATOM 788 CB THR 103 7.887 91.198 7.812 1.00 30.00 C ATOM 789 OG1 THR 103 9.264 91.534 7.602 1.00 30.00 O ATOM 790 CG2 THR 103 7.681 90.894 9.288 1.00 30.00 C ATOM 791 N LYS 104 6.948 91.069 4.865 1.00 30.00 N ATOM 792 CA LYS 104 7.009 91.269 3.443 1.00 30.00 C ATOM 793 C LYS 104 8.364 91.763 3.097 1.00 30.00 C ATOM 794 O LYS 104 8.949 91.336 2.102 1.00 30.00 O ATOM 795 CB LYS 104 5.923 92.247 2.992 1.00 30.00 C ATOM 796 CG LYS 104 4.512 91.687 3.070 1.00 30.00 C ATOM 797 CD LYS 104 3.484 92.715 2.627 1.00 30.00 C ATOM 798 CE LYS 104 2.072 92.160 2.718 1.00 30.00 C ATOM 799 NZ LYS 104 1.051 93.171 2.328 1.00 30.00 N ATOM 800 N ASP 105 8.895 92.683 3.916 1.00 30.00 N ATOM 801 CA ASP 105 10.190 93.225 3.658 1.00 30.00 C ATOM 802 C ASP 105 11.210 92.133 3.688 1.00 30.00 C ATOM 803 O ASP 105 12.129 92.099 2.870 1.00 30.00 O ATOM 804 CB ASP 105 10.529 94.313 4.678 1.00 30.00 C ATOM 805 CG ASP 105 9.727 95.582 4.465 1.00 30.00 C ATOM 806 OD1 ASP 105 9.119 95.726 3.383 1.00 30.00 O ATOM 807 OD2 ASP 105 9.707 96.432 5.380 1.00 30.00 O ATOM 808 N ARG 106 11.067 91.204 4.644 1.00 30.00 N ATOM 809 CA ARG 106 12.071 90.218 4.890 1.00 30.00 C ATOM 810 C ARG 106 12.232 89.338 3.701 1.00 30.00 C ATOM 811 O ARG 106 13.342 88.896 3.409 1.00 30.00 O ATOM 812 CB ARG 106 11.719 89.390 6.127 1.00 30.00 C ATOM 813 CG ARG 106 11.840 90.150 7.438 1.00 30.00 C ATOM 814 CD ARG 106 11.426 89.286 8.618 1.00 30.00 C ATOM 815 NE ARG 106 11.558 89.994 9.889 1.00 30.00 N ATOM 816 CZ ARG 106 11.125 89.525 11.053 1.00 30.00 C ATOM 817 NH1 ARG 106 11.289 90.239 12.158 1.00 30.00 H ATOM 818 NH2 ARG 106 10.528 88.342 11.112 1.00 30.00 H ATOM 819 N CYS 107 11.123 89.065 2.988 1.00 30.00 N ATOM 820 CA CYS 107 11.158 88.170 1.872 1.00 30.00 C ATOM 821 C CYS 107 12.201 88.668 0.934 1.00 30.00 C ATOM 822 O CYS 107 12.225 89.858 0.635 1.00 30.00 O ATOM 823 CB CYS 107 9.782 88.086 1.209 1.00 30.00 C ATOM 824 SG CYS 107 8.501 87.334 2.238 1.00 30.00 S ATOM 825 N GLY 108 13.085 87.760 0.456 1.00 30.00 N ATOM 826 CA GLY 108 14.141 88.106 -0.459 1.00 30.00 C ATOM 827 C GLY 108 15.280 88.740 0.285 1.00 30.00 C ATOM 828 O GLY 108 15.976 89.598 -0.253 1.00 30.00 O ATOM 829 N GLU 109 15.512 88.339 1.549 1.00 30.00 N ATOM 830 CA GLU 109 16.541 88.978 2.328 1.00 30.00 C ATOM 831 C GLU 109 17.827 88.213 2.251 1.00 30.00 C ATOM 832 O GLU 109 17.846 86.985 2.323 1.00 30.00 O ATOM 833 CB GLU 109 16.100 89.119 3.786 1.00 30.00 C ATOM 834 CG GLU 109 17.098 89.850 4.669 1.00 30.00 C ATOM 835 CD GLU 109 16.608 90.010 6.095 1.00 30.00 C ATOM 836 OE1 GLU 109 15.540 89.452 6.420 1.00 30.00 O ATOM 837 OE2 GLU 109 17.294 90.692 6.886 1.00 30.00 O ATOM 838 N VAL 110 18.942 88.962 2.099 1.00 30.00 N ATOM 839 CA VAL 110 20.271 88.425 2.024 1.00 30.00 C ATOM 840 C VAL 110 20.851 88.060 3.370 1.00 30.00 C ATOM 841 O VAL 110 21.600 87.091 3.457 1.00 30.00 O ATOM 842 CB VAL 110 21.237 89.401 1.328 1.00 30.00 C ATOM 843 CG1 VAL 110 22.665 88.888 1.412 1.00 30.00 C ATOM 844 CG2 VAL 110 20.826 89.613 -0.121 1.00 30.00 C ATOM 845 N ARG 111 20.555 88.789 4.472 1.00 29.33 N ATOM 846 CA ARG 111 21.299 88.442 5.644 1.00 29.33 C ATOM 847 C ARG 111 20.329 88.294 6.766 1.00 29.33 C ATOM 848 O ARG 111 19.468 89.147 6.973 1.00 29.33 O ATOM 849 CB ARG 111 22.358 89.506 5.940 1.00 29.33 C ATOM 850 CG ARG 111 23.205 89.213 7.168 1.00 29.33 C ATOM 851 CD ARG 111 24.256 90.289 7.384 1.00 29.33 C ATOM 852 NE ARG 111 25.090 90.015 8.551 1.00 29.33 N ATOM 853 CZ ARG 111 24.799 90.407 9.786 1.00 29.33 C ATOM 854 NH1 ARG 111 25.617 90.111 10.787 1.00 29.33 H ATOM 855 NH2 ARG 111 23.689 91.095 10.019 1.00 29.33 H ATOM 856 N ASN 112 20.444 87.191 7.531 1.00 28.77 N ATOM 857 CA ASN 112 19.794 87.163 8.804 1.00 28.77 C ATOM 858 C ASN 112 20.864 87.238 9.841 1.00 28.77 C ATOM 859 O ASN 112 21.876 86.544 9.763 1.00 28.77 O ATOM 860 CB ASN 112 18.926 85.910 8.936 1.00 28.77 C ATOM 861 CG ASN 112 17.758 85.907 7.970 1.00 28.77 C ATOM 862 OD1 ASN 112 17.066 86.913 7.813 1.00 28.77 O ATOM 863 ND2 ASN 112 17.534 84.771 7.317 1.00 28.77 N ATOM 864 N GLU 113 20.658 88.101 10.854 1.00 30.00 N ATOM 865 CA GLU 113 21.628 88.222 11.897 1.00 30.00 C ATOM 866 C GLU 113 21.314 87.165 12.904 1.00 30.00 C ATOM 867 O GLU 113 22.049 86.186 13.033 1.00 30.00 O ATOM 868 CB GLU 113 21.594 89.628 12.500 1.00 30.00 C ATOM 869 CG GLU 113 22.637 89.866 13.579 1.00 30.00 C ATOM 870 CD GLU 113 22.618 91.288 14.105 1.00 30.00 C ATOM 871 OE1 GLU 113 22.808 92.222 13.298 1.00 30.00 O ATOM 872 OE2 GLU 113 22.414 91.468 15.324 1.00 30.00 O ATOM 873 N GLU 114 20.206 87.329 13.654 1.00 30.00 N ATOM 874 CA GLU 114 19.909 86.393 14.692 1.00 30.00 C ATOM 875 C GLU 114 18.433 86.199 14.682 1.00 30.00 C ATOM 876 O GLU 114 17.675 87.101 15.037 1.00 30.00 O ATOM 877 CB GLU 114 20.422 86.906 16.039 1.00 30.00 C ATOM 878 CG GLU 114 20.200 85.945 17.195 1.00 30.00 C ATOM 879 CD GLU 114 20.785 86.455 18.497 1.00 30.00 C ATOM 880 OE1 GLU 114 21.330 87.579 18.504 1.00 30.00 O ATOM 881 OE2 GLU 114 20.697 85.732 19.512 1.00 30.00 O ATOM 882 N ASN 115 17.986 85.002 14.269 1.00 30.00 N ATOM 883 CA ASN 115 16.581 84.734 14.271 1.00 30.00 C ATOM 884 C ASN 115 16.429 83.280 14.569 1.00 30.00 C ATOM 885 O ASN 115 17.406 82.533 14.582 1.00 30.00 O ATOM 886 CB ASN 115 15.956 85.142 12.935 1.00 30.00 C ATOM 887 CG ASN 115 14.473 85.433 13.050 1.00 30.00 C ATOM 888 OD1 ASN 115 13.795 84.913 13.936 1.00 30.00 O ATOM 889 ND2 ASN 115 13.964 86.268 12.151 1.00 30.00 N ATOM 890 N ALA 116 15.182 82.840 14.818 1.00 30.00 N ATOM 891 CA ALA 116 14.942 81.446 15.021 1.00 30.00 C ATOM 892 C ALA 116 15.102 80.787 13.692 1.00 30.00 C ATOM 893 O ALA 116 16.069 80.064 13.461 1.00 30.00 O ATOM 894 CB ALA 116 13.559 81.227 15.617 1.00 30.00 C ATOM 895 N CYS 117 14.142 81.026 12.776 1.00 29.49 N ATOM 896 CA CYS 117 14.169 80.359 11.513 1.00 29.49 C ATOM 897 C CYS 117 14.704 81.331 10.517 1.00 29.49 C ATOM 898 O CYS 117 15.051 82.459 10.859 1.00 29.49 O ATOM 899 CB CYS 117 12.771 79.860 11.141 1.00 29.49 C ATOM 900 SG CYS 117 11.573 81.172 10.808 1.00 29.49 S ATOM 901 N HIS 118 14.786 80.913 9.241 1.00 30.00 N ATOM 902 CA HIS 118 15.208 81.820 8.220 1.00 30.00 C ATOM 903 C HIS 118 14.016 82.111 7.371 1.00 30.00 C ATOM 904 O HIS 118 13.104 81.292 7.260 1.00 30.00 O ATOM 905 CB HIS 118 16.361 81.219 7.412 1.00 30.00 C ATOM 906 CG HIS 118 17.620 81.034 8.199 1.00 30.00 C ATOM 907 ND1 HIS 118 18.673 81.921 8.137 1.00 30.00 N ATOM 908 CD2 HIS 118 18.118 80.046 9.147 1.00 30.00 C ATOM 909 CE1 HIS 118 19.655 81.491 8.951 1.00 30.00 C ATOM 910 NE2 HIS 118 19.328 80.367 9.558 1.00 30.00 N ATOM 911 N CYS 119 13.994 83.302 6.744 1.00 30.00 N ATOM 912 CA CYS 119 12.856 83.686 5.964 1.00 30.00 C ATOM 913 C CYS 119 13.319 83.841 4.555 1.00 30.00 C ATOM 914 O CYS 119 12.762 84.629 3.792 1.00 30.00 O ATOM 915 CB CYS 119 12.240 84.974 6.514 1.00 30.00 C ATOM 916 SG CYS 119 11.574 84.827 8.189 1.00 30.00 S ATOM 917 N SER 120 14.362 83.084 4.172 1.00 30.00 N ATOM 918 CA SER 120 14.985 83.324 2.905 1.00 30.00 C ATOM 919 C SER 120 14.302 82.467 1.888 1.00 30.00 C ATOM 920 O SER 120 13.383 81.715 2.206 1.00 30.00 O ATOM 921 CB SER 120 16.484 83.029 2.982 1.00 30.00 C ATOM 922 OG SER 120 16.724 81.642 3.144 1.00 30.00 O ATOM 923 N GLU 121 14.749 82.569 0.620 1.00 30.00 N ATOM 924 CA GLU 121 14.301 81.669 -0.402 1.00 30.00 C ATOM 925 C GLU 121 15.004 80.376 -0.156 1.00 30.00 C ATOM 926 O GLU 121 14.518 79.301 -0.503 1.00 30.00 O ATOM 927 CB GLU 121 14.595 82.245 -1.788 1.00 30.00 C ATOM 928 CG GLU 121 13.779 83.481 -2.133 1.00 30.00 C ATOM 929 CD GLU 121 14.115 84.038 -3.502 1.00 30.00 C ATOM 930 OE1 GLU 121 15.089 83.555 -4.117 1.00 30.00 O ATOM 931 OE2 GLU 121 13.405 84.958 -3.959 1.00 30.00 O ATOM 932 N ASP 122 16.198 80.465 0.466 1.00 30.00 N ATOM 933 CA ASP 122 17.009 79.319 0.756 1.00 30.00 C ATOM 934 C ASP 122 16.335 78.483 1.803 1.00 30.00 C ATOM 935 O ASP 122 16.605 77.288 1.909 1.00 30.00 O ATOM 936 CB ASP 122 18.403 79.751 1.215 1.00 30.00 C ATOM 937 CG ASP 122 19.229 80.344 0.090 1.00 30.00 C ATOM 938 OD1 ASP 122 18.848 80.163 -1.085 1.00 30.00 O ATOM 939 OD2 ASP 122 20.258 80.988 0.384 1.00 30.00 O ATOM 940 N CYS 123 15.436 79.088 2.608 1.00 29.86 N ATOM 941 CA CYS 123 14.836 78.424 3.730 1.00 29.86 C ATOM 942 C CYS 123 13.904 77.353 3.252 1.00 29.86 C ATOM 943 O CYS 123 13.595 76.426 3.999 1.00 29.86 O ATOM 944 CB CYS 123 14.097 79.429 4.615 1.00 29.86 C ATOM 945 SG CYS 123 12.629 80.158 3.852 1.00 29.86 S ATOM 946 N LEU 124 13.431 77.450 1.993 1.00 28.79 N ATOM 947 CA LEU 124 12.528 76.473 1.459 1.00 28.79 C ATOM 948 C LEU 124 13.279 75.192 1.282 1.00 28.79 C ATOM 949 O LEU 124 12.813 74.130 1.692 1.00 28.79 O ATOM 950 CB LEU 124 11.927 76.963 0.139 1.00 28.79 C ATOM 951 CG LEU 124 10.951 76.012 -0.555 1.00 28.79 C ATOM 952 CD1 LEU 124 9.753 75.724 0.337 1.00 28.79 C ATOM 953 CD2 LEU 124 10.492 76.590 -1.886 1.00 28.79 C ATOM 954 N SER 125 14.471 75.269 0.658 1.00 27.80 N ATOM 955 CA SER 125 15.175 74.086 0.257 1.00 27.80 C ATOM 956 C SER 125 15.733 73.439 1.482 1.00 27.80 C ATOM 957 O SER 125 15.712 72.216 1.612 1.00 27.80 O ATOM 958 CB SER 125 16.273 74.432 -0.751 1.00 27.80 C ATOM 959 OG SER 125 17.273 75.243 -0.157 1.00 27.80 O ATOM 960 N ARG 126 16.250 74.261 2.413 1.00 24.21 N ATOM 961 CA ARG 126 16.960 73.752 3.547 1.00 24.21 C ATOM 962 C ARG 126 15.955 73.141 4.464 1.00 24.21 C ATOM 963 O ARG 126 16.227 72.140 5.129 1.00 24.21 O ATOM 964 CB ARG 126 17.754 74.869 4.227 1.00 24.21 C ATOM 965 CG ARG 126 18.943 75.366 3.419 1.00 24.21 C ATOM 966 CD ARG 126 19.654 76.507 4.129 1.00 24.21 C ATOM 967 NE ARG 126 20.811 76.982 3.375 1.00 24.21 N ATOM 968 CZ ARG 126 21.537 78.045 3.711 1.00 24.21 C ATOM 969 NH1 ARG 126 22.572 78.403 2.965 1.00 24.21 H ATOM 970 NH2 ARG 126 21.224 78.745 4.793 1.00 24.21 H ATOM 971 N GLY 127 14.755 73.739 4.521 1.00 24.19 N ATOM 972 CA GLY 127 13.741 73.247 5.401 1.00 24.19 C ATOM 973 C GLY 127 13.786 74.081 6.635 1.00 24.19 C ATOM 974 O GLY 127 13.253 73.699 7.676 1.00 24.19 O ATOM 975 N ASP 128 14.432 75.259 6.546 1.00 25.71 N ATOM 976 CA ASP 128 14.568 76.086 7.704 1.00 25.71 C ATOM 977 C ASP 128 13.517 77.141 7.613 1.00 25.71 C ATOM 978 O ASP 128 13.739 78.284 8.007 1.00 25.71 O ATOM 979 CB ASP 128 15.977 76.677 7.778 1.00 25.71 C ATOM 980 CG ASP 128 17.039 75.623 8.021 1.00 25.71 C ATOM 981 OD1 ASP 128 16.780 74.690 8.810 1.00 25.71 O ATOM 982 OD2 ASP 128 18.130 75.730 7.423 1.00 25.71 O ATOM 983 N CYS 129 12.332 76.786 7.086 1.00 24.47 N ATOM 984 CA CYS 129 11.306 77.774 6.946 1.00 24.47 C ATOM 985 C CYS 129 10.737 78.022 8.302 1.00 24.47 C ATOM 986 O CYS 129 10.937 77.235 9.226 1.00 24.47 O ATOM 987 CB CYS 129 10.240 77.303 5.954 1.00 24.47 C ATOM 988 SG CYS 129 10.836 77.106 4.258 1.00 24.47 S ATOM 989 N CYS 130 10.004 79.141 8.454 1.00 26.04 N ATOM 990 CA CYS 130 9.350 79.407 9.698 1.00 26.04 C ATOM 991 C CYS 130 8.052 78.672 9.679 1.00 26.04 C ATOM 992 O CYS 130 7.713 78.014 8.695 1.00 26.04 O ATOM 993 CB CYS 130 9.159 80.912 9.893 1.00 26.04 C ATOM 994 SG CYS 130 10.699 81.850 10.023 1.00 26.04 S ATOM 995 N THR 131 7.285 78.769 10.781 1.00 24.46 N ATOM 996 CA THR 131 6.066 78.021 10.857 1.00 24.46 C ATOM 997 C THR 131 4.988 78.817 10.189 1.00 24.46 C ATOM 998 O THR 131 4.081 78.254 9.576 1.00 24.46 O ATOM 999 CB THR 131 5.690 77.701 12.315 1.00 24.46 C ATOM 1000 OG1 THR 131 5.505 78.920 13.044 1.00 24.46 O ATOM 1001 CG2 THR 131 6.794 76.897 12.985 1.00 24.46 C ATOM 1002 N ASN 132 5.030 80.165 10.273 1.00 25.53 N ATOM 1003 CA ASN 132 4.031 80.979 9.647 1.00 25.53 C ATOM 1004 C ASN 132 4.657 81.669 8.481 1.00 25.53 C ATOM 1005 O ASN 132 4.395 82.844 8.222 1.00 25.53 O ATOM 1006 CB ASN 132 3.436 81.967 10.653 1.00 25.53 C ATOM 1007 CG ASN 132 2.621 81.280 11.732 1.00 25.53 C ATOM 1008 OD1 ASN 132 1.814 80.397 11.445 1.00 25.53 O ATOM 1009 ND2 ASN 132 2.833 81.685 12.979 1.00 25.53 N ATOM 1010 N TYR 133 5.512 80.943 7.736 1.00 25.42 N ATOM 1011 CA TYR 133 6.141 81.557 6.610 1.00 25.42 C ATOM 1012 C TYR 133 5.184 81.710 5.557 1.00 25.42 C ATOM 1013 O TYR 133 5.129 82.762 4.962 1.00 25.42 O ATOM 1014 CB TYR 133 7.339 80.727 6.146 1.00 25.42 C ATOM 1015 CG TYR 133 8.058 81.304 4.947 1.00 25.42 C ATOM 1016 CD1 TYR 133 8.933 82.372 5.090 1.00 25.42 C ATOM 1017 CD2 TYR 133 7.857 80.779 3.677 1.00 25.42 C ATOM 1018 CE1 TYR 133 9.595 82.906 4.000 1.00 25.42 C ATOM 1019 CE2 TYR 133 8.509 81.300 2.576 1.00 25.42 C ATOM 1020 CZ TYR 133 9.384 82.373 2.747 1.00 25.42 C ATOM 1021 OH TYR 133 10.040 82.903 1.661 1.00 25.42 H ATOM 1022 N GLN 134 4.418 80.636 5.328 1.00 25.53 N ATOM 1023 CA GLN 134 3.468 80.622 4.270 1.00 25.53 C ATOM 1024 C GLN 134 2.361 81.570 4.549 1.00 25.53 C ATOM 1025 O GLN 134 1.888 82.242 3.636 1.00 25.53 O ATOM 1026 CB GLN 134 2.919 79.209 4.063 1.00 25.53 C ATOM 1027 CG GLN 134 3.931 78.226 3.499 1.00 25.53 C ATOM 1028 CD GLN 134 3.377 76.821 3.381 1.00 25.53 C ATOM 1029 OE1 GLN 134 2.459 76.442 4.109 1.00 25.53 O ATOM 1030 NE2 GLN 134 3.932 76.042 2.460 1.00 25.53 N ATOM 1031 N VAL 135 1.911 81.656 5.813 1.00 26.20 N ATOM 1032 CA VAL 135 0.784 82.510 6.016 1.00 26.20 C ATOM 1033 C VAL 135 1.165 83.918 5.670 1.00 26.20 C ATOM 1034 O VAL 135 0.436 84.595 4.946 1.00 26.20 O ATOM 1035 CB VAL 135 0.264 82.424 7.463 1.00 26.20 C ATOM 1036 CG1 VAL 135 -0.789 83.492 7.716 1.00 26.20 C ATOM 1037 CG2 VAL 135 -0.299 81.039 7.745 1.00 26.20 C ATOM 1038 N VAL 136 2.314 84.408 6.172 1.00 25.90 N ATOM 1039 CA VAL 136 2.678 85.761 5.875 1.00 25.90 C ATOM 1040 C VAL 136 3.000 85.914 4.418 1.00 25.90 C ATOM 1041 O VAL 136 2.424 86.752 3.727 1.00 25.90 O ATOM 1042 CB VAL 136 3.872 86.225 6.731 1.00 25.90 C ATOM 1043 CG1 VAL 136 4.357 87.591 6.271 1.00 25.90 C ATOM 1044 CG2 VAL 136 3.491 86.257 8.202 1.00 25.90 C ATOM 1045 N CYS 137 3.943 85.091 3.918 1.00 27.55 N ATOM 1046 CA CYS 137 4.445 85.230 2.579 1.00 27.55 C ATOM 1047 C CYS 137 3.384 84.946 1.566 1.00 27.55 C ATOM 1048 O CYS 137 3.139 85.733 0.654 1.00 27.55 O ATOM 1049 CB CYS 137 5.640 84.301 2.355 1.00 27.55 C ATOM 1050 SG CYS 137 7.133 84.775 3.257 1.00 27.55 S ATOM 1051 N LYS 138 2.730 83.785 1.725 1.00 27.35 N ATOM 1052 CA LYS 138 1.799 83.294 0.759 1.00 27.35 C ATOM 1053 C LYS 138 0.582 84.167 0.679 1.00 27.35 C ATOM 1054 O LYS 138 -0.100 84.173 -0.342 1.00 27.35 O ATOM 1055 CB LYS 138 1.390 81.858 1.091 1.00 27.35 C ATOM 1056 CG LYS 138 2.526 80.852 1.002 1.00 27.35 C ATOM 1057 CD LYS 138 3.059 80.745 -0.418 1.00 27.35 C ATOM 1058 CE LYS 138 4.102 79.645 -0.536 1.00 27.35 C ATOM 1059 NZ LYS 138 4.647 79.542 -1.917 1.00 27.35 N ATOM 1060 N GLY 139 0.272 84.928 1.745 1.00 26.75 N ATOM 1061 CA GLY 139 -0.958 85.675 1.837 1.00 26.75 C ATOM 1062 C GLY 139 -1.125 86.640 0.706 1.00 26.75 C ATOM 1063 O GLY 139 -0.212 86.890 -0.080 1.00 26.75 O ATOM 1064 N GLU 140 -2.337 87.223 0.595 1.00 25.23 N ATOM 1065 CA GLU 140 -2.557 88.121 -0.497 1.00 25.23 C ATOM 1066 C GLU 140 -2.856 89.495 -0.020 1.00 25.23 C ATOM 1067 O GLU 140 -3.478 89.713 1.018 1.00 25.23 O ATOM 1068 CB GLU 140 -3.698 87.617 -1.383 1.00 25.23 C ATOM 1069 CG GLU 140 -3.417 86.286 -2.061 1.00 25.23 C ATOM 1070 CD GLU 140 -4.563 85.828 -2.940 1.00 25.23 C ATOM 1071 OE1 GLU 140 -5.657 86.422 -2.850 1.00 25.23 O ATOM 1072 OE2 GLU 140 -4.367 84.872 -3.721 1.00 25.23 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.35 69.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 64.12 64.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 30.71 80.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.63 64.1 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 68.93 63.9 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 74.27 57.7 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 55.66 76.9 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.37 65.2 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 51.04 72.2 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 62.60 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 61.86 85.7 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.76 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 65.20 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 47.67 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 97.45 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.78 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 72.78 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 88.87 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 9.79 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.50 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.50 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0555 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.78 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.61 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.59 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.88 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.71 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.22 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.40 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.56 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.42 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.01 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.28 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.34 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 26.237 0.869 0.879 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 25.747 0.854 0.867 32 100.0 32 ERRCA BURIED . . . . . . . . 27.446 0.905 0.910 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 26.186 0.865 0.876 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 25.685 0.849 0.863 156 100.0 156 ERRMC BURIED . . . . . . . . 27.388 0.902 0.907 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 24.355 0.778 0.806 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 24.299 0.776 0.804 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 23.792 0.760 0.790 112 100.0 112 ERRSC BURIED . . . . . . . . 25.544 0.816 0.839 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 25.343 0.825 0.844 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 24.847 0.810 0.831 240 100.0 240 ERRALL BURIED . . . . . . . . 26.477 0.859 0.873 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 33 39 41 45 45 45 DISTCA CA (P) 8.89 73.33 86.67 91.11 100.00 45 DISTCA CA (RMS) 0.65 1.43 1.63 1.84 2.50 DISTCA ALL (N) 28 178 247 305 331 345 345 DISTALL ALL (P) 8.12 51.59 71.59 88.41 95.94 345 DISTALL ALL (RMS) 0.72 1.41 1.74 2.33 3.01 DISTALL END of the results output