####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS420_1_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS420_1_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 112 - 130 4.87 14.09 LONGEST_CONTINUOUS_SEGMENT: 19 113 - 131 4.99 13.12 LCS_AVERAGE: 37.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 111 - 118 1.36 14.99 LCS_AVERAGE: 12.99 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 111 - 117 0.99 14.68 LCS_AVERAGE: 9.38 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 4 11 3 3 3 3 3 5 5 9 11 13 17 17 18 20 25 28 30 32 33 35 LCS_GDT A 97 A 97 3 5 16 3 3 3 5 5 9 10 11 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT R 98 R 98 4 6 16 3 3 4 4 5 9 10 11 12 13 15 17 20 21 25 28 30 32 34 36 LCS_GDT G 99 G 99 4 6 16 3 3 4 5 5 6 10 10 11 13 15 17 20 21 25 28 30 32 34 36 LCS_GDT W 100 W 100 4 6 16 3 3 4 5 6 8 9 9 11 12 14 14 15 18 22 28 29 32 33 35 LCS_GDT E 101 E 101 4 6 16 3 3 4 5 6 8 9 9 11 12 14 14 16 20 22 24 28 31 33 36 LCS_GDT C 102 C 102 3 6 16 3 3 4 5 6 8 9 9 11 12 14 14 15 20 22 22 25 27 31 36 LCS_GDT T 103 T 103 3 6 16 3 3 4 5 6 8 9 9 11 12 14 14 17 20 22 23 26 27 32 36 LCS_GDT K 104 K 104 3 5 16 3 4 4 4 5 8 9 12 14 16 16 17 17 20 22 22 26 28 31 34 LCS_GDT D 105 D 105 3 5 16 3 4 4 6 8 9 10 12 14 16 16 17 17 19 20 22 25 27 31 33 LCS_GDT R 106 R 106 3 5 16 3 4 4 5 8 9 10 12 14 16 16 17 18 20 22 25 28 32 34 36 LCS_GDT C 107 C 107 3 5 16 3 3 3 6 6 8 9 10 12 16 16 17 18 20 23 26 30 32 34 36 LCS_GDT G 108 G 108 4 5 16 3 4 4 6 6 8 9 10 11 13 14 15 18 20 23 25 30 32 34 36 LCS_GDT E 109 E 109 4 5 16 3 4 4 4 6 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT V 110 V 110 4 5 16 3 4 4 6 6 9 10 11 12 13 16 17 20 21 25 28 30 32 34 36 LCS_GDT R 111 R 111 7 8 16 3 6 7 8 8 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT N 112 N 112 7 8 19 3 6 7 8 8 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT E 113 E 113 7 8 19 3 6 7 8 8 8 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT E 114 E 114 7 8 19 3 6 7 8 8 8 10 12 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT N 115 N 115 7 8 19 3 6 7 8 8 8 10 12 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT A 116 A 116 7 8 19 3 6 7 8 8 8 9 9 12 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT C 117 C 117 7 8 19 3 3 7 8 8 8 10 12 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT H 118 H 118 6 8 19 3 4 7 8 8 8 10 12 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT C 119 C 119 4 5 19 3 4 4 4 5 7 10 12 13 15 17 17 18 20 23 28 30 32 34 36 LCS_GDT S 120 S 120 4 5 19 3 4 4 5 6 8 10 12 14 16 17 17 18 21 25 28 30 32 34 36 LCS_GDT E 121 E 121 4 5 19 4 4 4 4 7 8 10 12 14 16 17 17 20 21 25 28 30 32 34 36 LCS_GDT D 122 D 122 4 5 19 4 4 4 5 7 8 10 12 14 16 17 17 19 21 25 28 30 32 34 36 LCS_GDT C 123 C 123 4 6 19 4 4 4 6 8 9 10 12 14 16 17 17 20 21 25 28 30 32 34 36 LCS_GDT L 124 L 124 4 7 19 4 4 4 5 6 8 10 12 13 15 17 17 20 21 25 28 30 32 34 36 LCS_GDT S 125 S 125 3 7 19 3 3 4 5 8 9 10 12 14 16 17 17 19 20 23 26 30 32 34 36 LCS_GDT R 126 R 126 3 7 19 3 3 4 5 6 9 10 12 14 16 16 17 18 19 21 24 28 32 34 36 LCS_GDT G 127 G 127 3 7 19 3 3 4 5 8 9 10 12 14 16 17 17 19 20 21 24 28 32 34 36 LCS_GDT D 128 D 128 3 7 19 3 3 4 6 8 9 10 12 14 16 17 17 18 19 20 22 26 29 34 36 LCS_GDT C 129 C 129 4 7 19 3 4 4 6 8 9 10 12 14 16 17 17 19 20 23 27 30 32 34 36 LCS_GDT C 130 C 130 4 7 19 3 4 4 6 8 9 10 12 14 16 17 17 19 20 23 25 28 32 34 36 LCS_GDT T 131 T 131 4 6 19 3 4 4 6 7 8 9 12 14 16 16 17 18 20 21 24 27 30 34 36 LCS_GDT N 132 N 132 4 6 17 3 4 4 6 7 8 9 12 14 16 16 17 19 20 25 28 30 32 34 36 LCS_GDT Y 133 Y 133 4 4 16 3 4 4 4 4 5 6 9 9 9 11 17 17 20 25 28 30 32 34 36 LCS_GDT Q 134 Q 134 4 4 16 3 4 4 6 7 8 9 11 12 12 13 15 17 19 24 28 30 32 34 36 LCS_GDT V 135 V 135 4 4 16 2 4 4 4 4 5 6 10 12 12 12 15 17 19 25 28 30 32 34 36 LCS_GDT V 136 V 136 3 4 16 2 3 3 5 6 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT C 137 C 137 4 4 16 3 3 4 5 6 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT K 138 K 138 4 4 10 3 3 4 5 6 9 10 11 12 14 16 17 20 21 25 28 30 32 34 36 LCS_GDT G 139 G 139 4 4 10 3 3 4 4 6 8 10 11 12 13 16 17 20 21 24 27 29 31 33 35 LCS_GDT E 140 E 140 4 4 6 3 3 4 4 4 6 6 10 12 14 16 17 18 20 22 25 26 30 32 35 LCS_AVERAGE LCS_A: 19.87 ( 9.38 12.99 37.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 8 9 10 12 14 16 17 17 20 21 25 28 30 32 34 36 GDT PERCENT_AT 8.89 13.33 15.56 17.78 17.78 20.00 22.22 26.67 31.11 35.56 37.78 37.78 44.44 46.67 55.56 62.22 66.67 71.11 75.56 80.00 GDT RMS_LOCAL 0.22 0.83 0.99 1.36 1.36 1.92 2.19 2.63 3.16 3.39 3.90 3.90 4.86 5.04 5.77 6.06 6.33 6.53 6.99 7.27 GDT RMS_ALL_AT 16.57 15.47 14.68 14.99 14.99 13.25 13.19 13.28 13.17 13.30 13.88 13.88 9.37 9.46 9.20 9.19 8.96 8.95 8.82 8.78 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 121 E 121 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 22.720 0 0.183 1.197 26.441 0.000 0.000 LGA A 97 A 97 20.030 0 0.155 0.188 21.551 0.000 0.000 LGA R 98 R 98 14.221 0 0.735 1.394 16.229 0.000 0.000 LGA G 99 G 99 14.337 0 0.428 0.428 17.305 0.000 0.000 LGA W 100 W 100 18.635 0 0.350 1.242 27.074 0.000 0.000 LGA E 101 E 101 17.682 0 0.631 1.103 20.380 0.000 0.000 LGA C 102 C 102 13.489 0 0.548 0.520 17.370 0.000 0.000 LGA T 103 T 103 9.449 0 0.369 1.073 12.179 4.643 2.653 LGA K 104 K 104 4.074 0 0.621 1.104 9.915 52.262 30.159 LGA D 105 D 105 2.443 0 0.113 0.921 7.915 63.095 39.286 LGA R 106 R 106 1.782 0 0.666 0.895 9.910 59.881 36.926 LGA C 107 C 107 5.047 0 0.120 0.662 8.961 19.881 19.683 LGA G 108 G 108 11.567 0 0.725 0.725 13.591 0.714 0.714 LGA E 109 E 109 15.133 0 0.045 1.037 16.988 0.000 0.000 LGA V 110 V 110 18.612 0 0.602 0.974 21.576 0.000 0.000 LGA R 111 R 111 21.412 0 0.608 1.248 27.584 0.000 0.000 LGA N 112 N 112 20.815 0 0.129 1.386 22.020 0.000 0.000 LGA E 113 E 113 21.987 0 0.123 1.338 25.558 0.000 0.000 LGA E 114 E 114 19.006 0 0.191 0.693 20.199 0.000 0.000 LGA N 115 N 115 14.338 0 0.215 1.047 16.262 0.000 0.000 LGA A 116 A 116 13.476 0 0.048 0.074 13.778 0.000 0.000 LGA C 117 C 117 9.045 0 0.564 0.969 10.569 0.476 5.556 LGA H 118 H 118 10.383 0 0.608 1.177 16.046 0.833 0.333 LGA C 119 C 119 7.878 0 0.204 0.957 10.717 13.333 9.683 LGA S 120 S 120 5.433 0 0.487 0.806 6.577 28.452 26.111 LGA E 121 E 121 3.572 0 0.337 1.364 6.913 56.667 37.989 LGA D 122 D 122 3.280 0 0.185 0.306 5.759 55.476 42.917 LGA C 123 C 123 1.426 0 0.629 0.854 5.249 67.500 61.508 LGA L 124 L 124 5.754 0 0.581 1.016 11.997 28.929 15.238 LGA S 125 S 125 3.057 0 0.715 0.807 4.882 64.048 54.127 LGA R 126 R 126 2.584 0 0.508 1.462 14.073 65.000 27.489 LGA G 127 G 127 2.751 0 0.494 0.494 3.649 61.548 61.548 LGA D 128 D 128 2.700 0 0.620 1.189 6.834 69.048 46.071 LGA C 129 C 129 0.740 0 0.047 0.743 3.417 85.952 80.714 LGA C 130 C 130 0.643 0 0.047 0.099 5.520 70.714 60.238 LGA T 131 T 131 5.650 0 0.632 1.383 7.591 24.643 18.435 LGA N 132 N 132 8.346 0 0.268 1.072 10.808 4.881 4.345 LGA Y 133 Y 133 9.708 0 0.308 1.195 18.204 0.833 0.278 LGA Q 134 Q 134 12.522 0 0.649 0.773 20.915 0.000 0.000 LGA V 135 V 135 12.516 0 0.599 0.639 15.286 0.000 0.000 LGA V 136 V 136 13.311 0 0.657 1.468 13.813 0.000 0.000 LGA C 137 C 137 14.132 0 0.700 1.027 17.776 0.000 0.000 LGA K 138 K 138 19.022 0 0.539 1.069 23.655 0.000 0.000 LGA G 139 G 139 23.633 0 0.725 0.725 26.281 0.000 0.000 LGA E 140 E 140 24.743 0 0.073 0.889 26.995 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.585 8.550 9.713 19.974 15.156 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 12 2.63 30.000 24.387 0.439 LGA_LOCAL RMSD: 2.632 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.276 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.585 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.623248 * X + -0.450085 * Y + -0.639520 * Z + 14.024342 Y_new = 0.640750 * X + 0.762730 * Y + 0.087649 * Z + 49.053608 Z_new = 0.448332 * X + -0.464399 * Y + 0.763762 * Z + 0.115942 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.799244 -0.464898 -0.546312 [DEG: 45.7933 -26.6367 -31.3013 ] ZXZ: -1.707002 0.701675 2.373796 [DEG: -97.8040 40.2030 136.0085 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS420_1_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS420_1_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 12 2.63 24.387 8.59 REMARK ---------------------------------------------------------- MOLECULE T0543TS420_1_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 1 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 2vj2_A ATOM 677 N THR 96 -2.221 90.810 5.501 1.00 0.00 N ATOM 678 CA THR 96 -0.974 90.317 5.001 1.00 0.00 C ATOM 679 CB THR 96 -1.047 90.147 3.510 1.00 0.00 C ATOM 680 OG1 THR 96 -1.261 91.402 2.881 1.00 0.00 O ATOM 681 CG2 THR 96 -2.200 89.184 3.182 1.00 0.00 C ATOM 682 C THR 96 0.167 91.255 5.284 1.00 0.00 C ATOM 683 O THR 96 1.202 90.842 5.801 1.00 0.00 O ATOM 684 N ALA 97 0.001 92.552 4.970 1.00 0.00 N ATOM 685 CA ALA 97 1.103 93.479 5.040 1.00 0.00 C ATOM 686 CB ALA 97 0.976 94.636 4.036 1.00 0.00 C ATOM 687 C ALA 97 1.267 94.092 6.397 1.00 0.00 C ATOM 688 O ALA 97 0.400 93.984 7.263 1.00 0.00 O ATOM 689 N ARG 98 2.445 94.723 6.613 1.00 0.00 N ATOM 690 CA ARG 98 2.726 95.436 7.829 1.00 0.00 C ATOM 691 CB ARG 98 2.439 94.588 9.083 1.00 0.00 C ATOM 692 CG ARG 98 3.231 93.284 9.172 1.00 0.00 C ATOM 693 CD ARG 98 2.902 92.486 10.435 1.00 0.00 C ATOM 694 NE ARG 98 1.432 92.240 10.435 1.00 0.00 N ATOM 695 CZ ARG 98 0.592 93.148 11.014 1.00 0.00 C ATOM 696 NH1 ARG 98 1.104 94.265 11.608 1.00 0.00 N ATOM 697 NH2 ARG 98 -0.756 92.939 10.995 1.00 0.00 N ATOM 698 C ARG 98 4.176 95.818 7.772 1.00 0.00 C ATOM 699 O ARG 98 4.786 95.673 6.714 1.00 0.00 O ATOM 700 N GLY 99 4.762 96.352 8.879 1.00 0.00 N ATOM 701 CA GLY 99 4.036 96.866 10.007 1.00 0.00 C ATOM 702 C GLY 99 3.676 98.319 9.861 1.00 0.00 C ATOM 703 O GLY 99 2.508 98.699 9.875 1.00 0.00 O ATOM 704 N TRP 100 4.722 99.175 9.750 1.00 0.00 N ATOM 705 CA TRP 100 4.564 100.609 9.716 1.00 0.00 C ATOM 706 CB TRP 100 5.881 101.350 10.009 1.00 0.00 C ATOM 707 CG TRP 100 5.758 102.856 9.988 1.00 0.00 C ATOM 708 CD2 TRP 100 5.334 103.644 11.106 1.00 0.00 C ATOM 709 CD1 TRP 100 6.002 103.732 8.967 1.00 0.00 C ATOM 710 NE1 TRP 100 5.756 105.017 9.387 1.00 0.00 N ATOM 711 CE2 TRP 100 5.342 104.978 10.703 1.00 0.00 C ATOM 712 CE3 TRP 100 4.964 103.284 12.373 1.00 0.00 C ATOM 713 CZ2 TRP 100 4.982 105.977 11.561 1.00 0.00 C ATOM 714 CZ3 TRP 100 4.601 104.293 13.235 1.00 0.00 C ATOM 715 CH2 TRP 100 4.610 105.615 12.837 1.00 0.00 C ATOM 716 C TRP 100 4.063 101.104 8.403 1.00 0.00 C ATOM 717 O TRP 100 3.008 101.731 8.305 1.00 0.00 O ATOM 718 N GLU 101 4.856 100.819 7.355 1.00 0.00 N ATOM 719 CA GLU 101 4.640 101.216 5.994 1.00 0.00 C ATOM 720 CB GLU 101 5.867 100.958 5.102 1.00 0.00 C ATOM 721 CG GLU 101 7.082 101.812 5.467 1.00 0.00 C ATOM 722 CD GLU 101 8.209 101.449 4.511 1.00 0.00 C ATOM 723 OE1 GLU 101 7.986 100.564 3.643 1.00 0.00 O ATOM 724 OE2 GLU 101 9.308 102.053 4.635 1.00 0.00 O ATOM 725 C GLU 101 3.526 100.404 5.450 1.00 0.00 C ATOM 726 O GLU 101 2.831 100.814 4.521 1.00 0.00 O ATOM 727 N CYS 102 3.331 99.216 6.042 1.00 0.00 N ATOM 728 CA CYS 102 2.394 98.282 5.512 1.00 0.00 C ATOM 729 CB CYS 102 0.999 98.883 5.279 1.00 0.00 C ATOM 730 SG CYS 102 0.287 99.536 6.817 1.00 0.00 S ATOM 731 C CYS 102 2.961 97.838 4.209 1.00 0.00 C ATOM 732 O CYS 102 2.242 97.416 3.303 1.00 0.00 O ATOM 733 N THR 103 4.295 97.979 4.079 1.00 0.00 N ATOM 734 CA THR 103 4.991 97.463 2.941 1.00 0.00 C ATOM 735 CB THR 103 5.553 98.536 2.062 1.00 0.00 C ATOM 736 OG1 THR 103 4.522 99.406 1.630 1.00 0.00 O ATOM 737 CG2 THR 103 6.234 97.876 0.851 1.00 0.00 C ATOM 738 C THR 103 6.183 96.758 3.494 1.00 0.00 C ATOM 739 O THR 103 7.303 97.239 3.339 1.00 0.00 O ATOM 740 N LYS 104 6.015 95.596 4.147 1.00 0.00 N ATOM 741 CA LYS 104 7.238 95.042 4.638 1.00 0.00 C ATOM 742 CB LYS 104 7.371 94.970 6.167 1.00 0.00 C ATOM 743 CG LYS 104 8.779 94.568 6.601 1.00 0.00 C ATOM 744 CD LYS 104 9.838 95.612 6.236 1.00 0.00 C ATOM 745 CE LYS 104 11.260 95.224 6.650 1.00 0.00 C ATOM 746 NZ LYS 104 12.212 96.284 6.251 1.00 0.00 N ATOM 747 C LYS 104 7.417 93.666 4.117 1.00 0.00 C ATOM 748 O LYS 104 6.497 92.847 4.148 1.00 0.00 O ATOM 749 N ASP 105 8.637 93.439 3.589 1.00 0.00 N ATOM 750 CA ASP 105 9.134 92.200 3.074 1.00 0.00 C ATOM 751 CB ASP 105 10.475 92.353 2.338 1.00 0.00 C ATOM 752 CG ASP 105 10.227 93.137 1.057 1.00 0.00 C ATOM 753 OD1 ASP 105 9.038 93.438 0.768 1.00 0.00 O ATOM 754 OD2 ASP 105 11.223 93.450 0.352 1.00 0.00 O ATOM 755 C ASP 105 9.370 91.286 4.230 1.00 0.00 C ATOM 756 O ASP 105 9.247 90.069 4.091 1.00 0.00 O ATOM 757 N ARG 106 9.719 91.870 5.399 1.00 0.00 N ATOM 758 CA ARG 106 10.049 91.118 6.579 1.00 0.00 C ATOM 759 CB ARG 106 10.162 91.973 7.853 1.00 0.00 C ATOM 760 CG ARG 106 11.524 92.641 8.047 1.00 0.00 C ATOM 761 CD ARG 106 11.523 93.688 9.164 1.00 0.00 C ATOM 762 NE ARG 106 10.220 93.558 9.873 1.00 0.00 N ATOM 763 CZ ARG 106 9.281 94.539 9.721 1.00 0.00 C ATOM 764 NH1 ARG 106 9.614 95.706 9.097 1.00 0.00 N ATOM 765 NH2 ARG 106 8.013 94.357 10.189 1.00 0.00 N ATOM 766 C ARG 106 8.985 90.109 6.807 1.00 0.00 C ATOM 767 O ARG 106 7.802 90.390 6.635 1.00 0.00 O ATOM 768 N CYS 107 9.411 88.898 7.218 1.00 0.00 N ATOM 769 CA CYS 107 8.533 87.775 7.333 1.00 0.00 C ATOM 770 CB CYS 107 9.246 86.471 7.726 1.00 0.00 C ATOM 771 SG CYS 107 8.226 84.996 7.445 1.00 0.00 S ATOM 772 C CYS 107 7.477 88.082 8.341 1.00 0.00 C ATOM 773 O CYS 107 7.669 88.901 9.236 1.00 0.00 O ATOM 774 N GLY 108 6.304 87.436 8.182 1.00 0.00 N ATOM 775 CA GLY 108 5.189 87.662 9.053 1.00 0.00 C ATOM 776 C GLY 108 4.391 86.402 9.071 1.00 0.00 C ATOM 777 O GLY 108 4.798 85.390 8.503 1.00 0.00 O ATOM 778 N GLU 109 3.214 86.432 9.720 1.00 0.00 N ATOM 779 CA GLU 109 2.439 85.233 9.802 1.00 0.00 C ATOM 780 CB GLU 109 1.136 85.372 10.610 1.00 0.00 C ATOM 781 CG GLU 109 0.147 86.378 10.027 1.00 0.00 C ATOM 782 CD GLU 109 -1.080 86.405 10.926 1.00 0.00 C ATOM 783 OE1 GLU 109 -1.086 85.657 11.940 1.00 0.00 O ATOM 784 OE2 GLU 109 -2.030 87.172 10.613 1.00 0.00 O ATOM 785 C GLU 109 2.096 84.827 8.411 1.00 0.00 C ATOM 786 O GLU 109 2.064 85.651 7.500 1.00 0.00 O ATOM 787 N VAL 110 1.827 83.520 8.231 1.00 0.00 N ATOM 788 CA VAL 110 1.565 82.934 6.949 1.00 0.00 C ATOM 789 CB VAL 110 1.135 81.504 7.069 1.00 0.00 C ATOM 790 CG1 VAL 110 0.796 80.970 5.668 1.00 0.00 C ATOM 791 CG2 VAL 110 2.227 80.721 7.818 1.00 0.00 C ATOM 792 C VAL 110 0.417 83.666 6.352 1.00 0.00 C ATOM 793 O VAL 110 0.394 83.953 5.157 1.00 0.00 O ATOM 794 N ARG 111 -0.559 84.006 7.201 1.00 0.00 N ATOM 795 CA ARG 111 -1.741 84.672 6.761 1.00 0.00 C ATOM 796 CB ARG 111 -2.642 84.997 7.965 1.00 0.00 C ATOM 797 CG ARG 111 -4.119 85.243 7.659 1.00 0.00 C ATOM 798 CD ARG 111 -4.948 85.353 8.942 1.00 0.00 C ATOM 799 NE ARG 111 -6.389 85.436 8.575 1.00 0.00 N ATOM 800 CZ ARG 111 -7.290 85.878 9.501 1.00 0.00 C ATOM 801 NH1 ARG 111 -6.864 86.241 10.745 1.00 0.00 N ATOM 802 NH2 ARG 111 -8.614 85.965 9.179 1.00 0.00 N ATOM 803 C ARG 111 -1.286 85.950 6.129 1.00 0.00 C ATOM 804 O ARG 111 -1.817 86.375 5.105 1.00 0.00 O ATOM 805 N ASN 112 -0.260 86.580 6.731 1.00 0.00 N ATOM 806 CA ASN 112 0.253 87.838 6.271 1.00 0.00 C ATOM 807 CB ASN 112 1.068 88.581 7.345 1.00 0.00 C ATOM 808 CG ASN 112 0.143 88.904 8.508 1.00 0.00 C ATOM 809 OD1 ASN 112 -1.012 88.481 8.537 1.00 0.00 O ATOM 810 ND2 ASN 112 0.666 89.673 9.501 1.00 0.00 N ATOM 811 C ASN 112 1.181 87.650 5.104 1.00 0.00 C ATOM 812 O ASN 112 1.814 86.608 4.939 1.00 0.00 O ATOM 813 N GLU 113 1.238 88.695 4.250 1.00 0.00 N ATOM 814 CA GLU 113 2.116 88.861 3.129 1.00 0.00 C ATOM 815 CB GLU 113 1.810 90.109 2.288 1.00 0.00 C ATOM 816 CG GLU 113 2.752 90.277 1.094 1.00 0.00 C ATOM 817 CD GLU 113 2.341 91.539 0.352 1.00 0.00 C ATOM 818 OE1 GLU 113 1.306 92.143 0.744 1.00 0.00 O ATOM 819 OE2 GLU 113 3.053 91.918 -0.615 1.00 0.00 O ATOM 820 C GLU 113 3.426 89.073 3.767 1.00 0.00 C ATOM 821 O GLU 113 4.488 88.854 3.186 1.00 0.00 O ATOM 822 N GLU 114 3.338 89.539 5.020 1.00 0.00 N ATOM 823 CA GLU 114 4.496 89.777 5.795 1.00 0.00 C ATOM 824 CB GLU 114 4.190 90.139 7.255 1.00 0.00 C ATOM 825 CG GLU 114 5.448 90.432 8.074 1.00 0.00 C ATOM 826 CD GLU 114 5.020 90.655 9.515 1.00 0.00 C ATOM 827 OE1 GLU 114 4.011 90.024 9.932 1.00 0.00 O ATOM 828 OE2 GLU 114 5.690 91.457 10.218 1.00 0.00 O ATOM 829 C GLU 114 5.201 88.478 5.801 1.00 0.00 C ATOM 830 O GLU 114 6.422 88.466 5.757 1.00 0.00 O ATOM 831 N ASN 115 4.455 87.354 5.811 1.00 0.00 N ATOM 832 CA ASN 115 5.079 86.060 5.858 1.00 0.00 C ATOM 833 CB ASN 115 4.083 84.890 5.818 1.00 0.00 C ATOM 834 CG ASN 115 4.832 83.619 6.184 1.00 0.00 C ATOM 835 OD1 ASN 115 5.773 83.222 5.501 1.00 0.00 O ATOM 836 ND2 ASN 115 4.411 82.962 7.299 1.00 0.00 N ATOM 837 C ASN 115 5.982 85.904 4.678 1.00 0.00 C ATOM 838 O ASN 115 5.554 85.566 3.575 1.00 0.00 O ATOM 839 N ALA 116 7.280 86.171 4.910 1.00 0.00 N ATOM 840 CA ALA 116 8.315 86.097 3.930 1.00 0.00 C ATOM 841 CB ALA 116 9.654 86.655 4.435 1.00 0.00 C ATOM 842 C ALA 116 8.535 84.673 3.545 1.00 0.00 C ATOM 843 O ALA 116 8.765 84.370 2.376 1.00 0.00 O ATOM 844 N CYS 117 8.448 83.753 4.524 1.00 0.00 N ATOM 845 CA CYS 117 8.792 82.386 4.264 1.00 0.00 C ATOM 846 CB CYS 117 8.573 81.445 5.472 1.00 0.00 C ATOM 847 SG CYS 117 9.553 81.859 6.953 1.00 0.00 S ATOM 848 C CYS 117 7.926 81.878 3.156 1.00 0.00 C ATOM 849 O CYS 117 8.406 81.198 2.252 1.00 0.00 O ATOM 850 N HIS 118 6.622 82.202 3.193 1.00 0.00 N ATOM 851 CA HIS 118 5.733 81.728 2.175 1.00 0.00 C ATOM 852 ND1 HIS 118 3.157 79.791 3.185 1.00 0.00 N ATOM 853 CG HIS 118 3.776 80.977 3.514 1.00 0.00 C ATOM 854 CB HIS 118 4.253 81.974 2.502 1.00 0.00 C ATOM 855 NE2 HIS 118 3.358 79.810 5.397 1.00 0.00 N ATOM 856 CD2 HIS 118 3.888 80.973 4.870 1.00 0.00 C ATOM 857 CE1 HIS 118 2.929 79.132 4.348 1.00 0.00 C ATOM 858 C HIS 118 6.071 82.335 0.853 1.00 0.00 C ATOM 859 O HIS 118 6.004 81.655 -0.171 1.00 0.00 O ATOM 860 N CYS 119 6.433 83.631 0.817 1.00 0.00 N ATOM 861 CA CYS 119 6.734 84.205 -0.463 1.00 0.00 C ATOM 862 CB CYS 119 5.979 85.522 -0.701 1.00 0.00 C ATOM 863 SG CYS 119 6.349 86.258 -2.317 1.00 0.00 S ATOM 864 C CYS 119 8.201 84.509 -0.517 1.00 0.00 C ATOM 865 O CYS 119 8.600 85.666 -0.642 1.00 0.00 O ATOM 866 N SER 120 9.053 83.467 -0.462 1.00 0.00 N ATOM 867 CA SER 120 10.466 83.712 -0.475 1.00 0.00 C ATOM 868 CB SER 120 10.973 84.476 0.758 1.00 0.00 C ATOM 869 OG SER 120 12.375 84.673 0.668 1.00 0.00 O ATOM 870 C SER 120 11.150 82.385 -0.467 1.00 0.00 C ATOM 871 O SER 120 11.789 81.994 -1.443 1.00 0.00 O ATOM 872 N GLU 121 11.002 81.648 0.655 1.00 0.00 N ATOM 873 CA GLU 121 11.665 80.389 0.842 1.00 0.00 C ATOM 874 CB GLU 121 11.226 79.291 -0.146 1.00 0.00 C ATOM 875 CG GLU 121 9.841 78.705 0.154 1.00 0.00 C ATOM 876 CD GLU 121 8.775 79.659 -0.365 1.00 0.00 C ATOM 877 OE1 GLU 121 9.141 80.622 -1.090 1.00 0.00 O ATOM 878 OE2 GLU 121 7.577 79.435 -0.046 1.00 0.00 O ATOM 879 C GLU 121 13.138 80.604 0.703 1.00 0.00 C ATOM 880 O GLU 121 13.811 79.946 -0.088 1.00 0.00 O ATOM 881 N ASP 122 13.658 81.570 1.487 1.00 0.00 N ATOM 882 CA ASP 122 15.037 81.967 1.502 1.00 0.00 C ATOM 883 CB ASP 122 15.282 83.241 2.333 1.00 0.00 C ATOM 884 CG ASP 122 14.921 82.963 3.786 1.00 0.00 C ATOM 885 OD1 ASP 122 14.057 82.078 4.029 1.00 0.00 O ATOM 886 OD2 ASP 122 15.506 83.637 4.676 1.00 0.00 O ATOM 887 C ASP 122 15.924 80.889 2.052 1.00 0.00 C ATOM 888 O ASP 122 17.069 80.756 1.626 1.00 0.00 O ATOM 889 N CYS 123 15.434 80.090 3.015 1.00 0.00 N ATOM 890 CA CYS 123 16.287 79.133 3.670 1.00 0.00 C ATOM 891 CB CYS 123 15.581 78.454 4.854 1.00 0.00 C ATOM 892 SG CYS 123 16.744 77.640 5.974 1.00 0.00 S ATOM 893 C CYS 123 16.724 78.074 2.696 1.00 0.00 C ATOM 894 O CYS 123 15.907 77.328 2.157 1.00 0.00 O ATOM 895 N LEU 124 18.053 77.982 2.456 1.00 0.00 N ATOM 896 CA LEU 124 18.618 77.015 1.552 1.00 0.00 C ATOM 897 CB LEU 124 19.953 77.427 0.906 1.00 0.00 C ATOM 898 CG LEU 124 19.827 78.602 -0.081 1.00 0.00 C ATOM 899 CD1 LEU 124 19.495 79.913 0.646 1.00 0.00 C ATOM 900 CD2 LEU 124 21.060 78.701 -0.994 1.00 0.00 C ATOM 901 C LEU 124 18.859 75.741 2.291 1.00 0.00 C ATOM 902 O LEU 124 18.716 75.676 3.510 1.00 0.00 O ATOM 903 N SER 125 19.176 74.654 1.554 1.00 0.00 N ATOM 904 CA SER 125 19.394 73.398 2.211 1.00 0.00 C ATOM 905 CB SER 125 20.440 73.458 3.340 1.00 0.00 C ATOM 906 OG SER 125 20.593 72.177 3.932 1.00 0.00 O ATOM 907 C SER 125 18.079 73.004 2.789 1.00 0.00 C ATOM 908 O SER 125 17.086 73.702 2.619 1.00 0.00 O ATOM 909 N ARG 126 17.983 71.864 3.481 1.00 0.00 N ATOM 910 CA ARG 126 16.667 71.624 3.983 1.00 0.00 C ATOM 911 CB ARG 126 16.372 70.141 4.274 1.00 0.00 C ATOM 912 CG ARG 126 14.920 69.881 4.684 1.00 0.00 C ATOM 913 CD ARG 126 14.585 68.399 4.876 1.00 0.00 C ATOM 914 NE ARG 126 15.120 67.981 6.202 1.00 0.00 N ATOM 915 CZ ARG 126 14.829 66.740 6.693 1.00 0.00 C ATOM 916 NH1 ARG 126 14.052 65.884 5.970 1.00 0.00 N ATOM 917 NH2 ARG 126 15.318 66.357 7.911 1.00 0.00 N ATOM 918 C ARG 126 16.556 72.383 5.263 1.00 0.00 C ATOM 919 O ARG 126 16.854 71.859 6.335 1.00 0.00 O ATOM 920 N GLY 127 16.106 73.650 5.180 1.00 0.00 N ATOM 921 CA GLY 127 15.985 74.442 6.366 1.00 0.00 C ATOM 922 C GLY 127 14.559 74.860 6.476 1.00 0.00 C ATOM 923 O GLY 127 13.968 75.339 5.509 1.00 0.00 O ATOM 924 N ASP 128 13.973 74.681 7.676 1.00 0.00 N ATOM 925 CA ASP 128 12.611 75.065 7.902 1.00 0.00 C ATOM 926 CB ASP 128 11.964 74.379 9.118 1.00 0.00 C ATOM 927 CG ASP 128 12.719 74.805 10.370 1.00 0.00 C ATOM 928 OD1 ASP 128 13.957 75.018 10.276 1.00 0.00 O ATOM 929 OD2 ASP 128 12.062 74.927 11.439 1.00 0.00 O ATOM 930 C ASP 128 12.602 76.536 8.149 1.00 0.00 C ATOM 931 O ASP 128 13.554 77.083 8.701 1.00 0.00 O ATOM 932 N CYS 129 11.512 77.212 7.738 1.00 0.00 N ATOM 933 CA CYS 129 11.429 78.634 7.891 1.00 0.00 C ATOM 934 CB CYS 129 11.279 79.352 6.531 1.00 0.00 C ATOM 935 SG CYS 129 11.434 81.165 6.587 1.00 0.00 S ATOM 936 C CYS 129 10.203 78.917 8.696 1.00 0.00 C ATOM 937 O CYS 129 9.162 78.294 8.500 1.00 0.00 O ATOM 938 N CYS 130 10.308 79.858 9.654 1.00 0.00 N ATOM 939 CA CYS 130 9.172 80.214 10.448 1.00 0.00 C ATOM 940 CB CYS 130 9.256 79.723 11.903 1.00 0.00 C ATOM 941 SG CYS 130 9.238 77.909 12.024 1.00 0.00 S ATOM 942 C CYS 130 9.141 81.703 10.482 1.00 0.00 C ATOM 943 O CYS 130 10.154 82.356 10.238 1.00 0.00 O ATOM 944 N THR 131 7.967 82.289 10.774 1.00 0.00 N ATOM 945 CA THR 131 7.938 83.715 10.794 1.00 0.00 C ATOM 946 CB THR 131 6.782 84.313 10.058 1.00 0.00 C ATOM 947 OG1 THR 131 6.864 85.726 10.146 1.00 0.00 O ATOM 948 CG2 THR 131 5.454 83.804 10.646 1.00 0.00 C ATOM 949 C THR 131 7.843 84.181 12.205 1.00 0.00 C ATOM 950 O THR 131 6.936 83.807 12.947 1.00 0.00 O ATOM 951 N ASN 132 8.827 84.994 12.626 1.00 0.00 N ATOM 952 CA ASN 132 8.744 85.573 13.928 1.00 0.00 C ATOM 953 CB ASN 132 9.950 85.221 14.824 1.00 0.00 C ATOM 954 CG ASN 132 11.238 85.688 14.156 1.00 0.00 C ATOM 955 OD1 ASN 132 11.953 86.535 14.689 1.00 0.00 O ATOM 956 ND2 ASN 132 11.549 85.118 12.960 1.00 0.00 N ATOM 957 C ASN 132 8.708 87.048 13.710 1.00 0.00 C ATOM 958 O ASN 132 9.502 87.802 14.270 1.00 0.00 O ATOM 959 N TYR 133 7.744 87.501 12.882 1.00 0.00 N ATOM 960 CA TYR 133 7.629 88.890 12.546 1.00 0.00 C ATOM 961 CB TYR 133 7.630 89.761 13.819 1.00 0.00 C ATOM 962 CG TYR 133 7.512 91.211 13.492 1.00 0.00 C ATOM 963 CD1 TYR 133 6.283 91.762 13.209 1.00 0.00 C ATOM 964 CD2 TYR 133 8.621 92.026 13.495 1.00 0.00 C ATOM 965 CE1 TYR 133 6.163 93.100 12.919 1.00 0.00 C ATOM 966 CE2 TYR 133 8.508 93.366 13.207 1.00 0.00 C ATOM 967 CZ TYR 133 7.277 93.904 12.918 1.00 0.00 C ATOM 968 OH TYR 133 7.157 95.278 12.622 1.00 0.00 O ATOM 969 C TYR 133 8.823 89.234 11.701 1.00 0.00 C ATOM 970 O TYR 133 9.026 90.388 11.330 1.00 0.00 O ATOM 971 N GLN 134 9.604 88.203 11.319 1.00 0.00 N ATOM 972 CA GLN 134 10.796 88.345 10.539 1.00 0.00 C ATOM 973 CB GLN 134 12.029 88.745 11.367 1.00 0.00 C ATOM 974 CG GLN 134 11.911 90.127 12.013 1.00 0.00 C ATOM 975 CD GLN 134 13.187 90.391 12.797 1.00 0.00 C ATOM 976 OE1 GLN 134 14.065 89.535 12.889 1.00 0.00 O ATOM 977 NE2 GLN 134 13.299 91.615 13.381 1.00 0.00 N ATOM 978 C GLN 134 11.070 86.988 9.984 1.00 0.00 C ATOM 979 O GLN 134 10.308 86.051 10.221 1.00 0.00 O ATOM 980 N VAL 135 12.161 86.843 9.209 1.00 0.00 N ATOM 981 CA VAL 135 12.444 85.552 8.658 1.00 0.00 C ATOM 982 CB VAL 135 12.913 85.590 7.232 1.00 0.00 C ATOM 983 CG1 VAL 135 13.237 84.154 6.790 1.00 0.00 C ATOM 984 CG2 VAL 135 11.855 86.290 6.367 1.00 0.00 C ATOM 985 C VAL 135 13.568 84.953 9.435 1.00 0.00 C ATOM 986 O VAL 135 14.597 85.589 9.655 1.00 0.00 O ATOM 987 N VAL 136 13.378 83.704 9.901 1.00 0.00 N ATOM 988 CA VAL 136 14.437 83.015 10.575 1.00 0.00 C ATOM 989 CB VAL 136 14.359 83.111 12.070 1.00 0.00 C ATOM 990 CG1 VAL 136 14.526 84.586 12.474 1.00 0.00 C ATOM 991 CG2 VAL 136 13.032 82.487 12.533 1.00 0.00 C ATOM 992 C VAL 136 14.288 81.575 10.215 1.00 0.00 C ATOM 993 O VAL 136 13.178 81.047 10.199 1.00 0.00 O ATOM 994 N CYS 137 15.396 80.881 9.896 1.00 0.00 N ATOM 995 CA CYS 137 15.173 79.503 9.594 1.00 0.00 C ATOM 996 CB CYS 137 15.290 79.124 8.105 1.00 0.00 C ATOM 997 SG CYS 137 16.980 79.001 7.464 1.00 0.00 S ATOM 998 C CYS 137 16.128 78.682 10.387 1.00 0.00 C ATOM 999 O CYS 137 17.172 79.162 10.825 1.00 0.00 O ATOM 1000 N LYS 138 15.758 77.410 10.625 1.00 0.00 N ATOM 1001 CA LYS 138 16.616 76.548 11.374 1.00 0.00 C ATOM 1002 CB LYS 138 15.862 75.656 12.377 1.00 0.00 C ATOM 1003 CG LYS 138 16.781 74.765 13.216 1.00 0.00 C ATOM 1004 CD LYS 138 16.086 74.136 14.425 1.00 0.00 C ATOM 1005 CE LYS 138 17.002 73.245 15.266 1.00 0.00 C ATOM 1006 NZ LYS 138 16.251 72.684 16.411 1.00 0.00 N ATOM 1007 C LYS 138 17.288 75.656 10.386 1.00 0.00 C ATOM 1008 O LYS 138 16.633 74.938 9.633 1.00 0.00 O ATOM 1009 N GLY 139 18.632 75.705 10.353 1.00 0.00 N ATOM 1010 CA GLY 139 19.358 74.901 9.418 1.00 0.00 C ATOM 1011 C GLY 139 19.565 73.547 10.009 1.00 0.00 C ATOM 1012 O GLY 139 19.483 73.361 11.222 1.00 0.00 O ATOM 1013 N GLU 140 19.855 72.561 9.139 1.00 0.00 N ATOM 1014 CA GLU 140 20.138 71.238 9.604 1.00 0.00 C ATOM 1015 CB GLU 140 20.008 70.152 8.521 1.00 0.00 C ATOM 1016 CG GLU 140 18.576 69.935 8.033 1.00 0.00 C ATOM 1017 CD GLU 140 18.613 68.841 6.976 1.00 0.00 C ATOM 1018 OE1 GLU 140 19.586 68.823 6.177 1.00 0.00 O ATOM 1019 OE2 GLU 140 17.672 68.002 6.960 1.00 0.00 O ATOM 1020 C GLU 140 21.562 71.256 10.041 1.00 0.00 C ATOM 1021 O GLU 140 22.332 72.118 9.622 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 96.96 31.8 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 98.85 32.3 62 100.0 62 ARMSMC BURIED . . . . . . . . 92.29 30.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.18 41.0 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 90.61 41.7 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 98.18 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 75.25 53.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.98 34.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 78.64 44.4 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 91.18 25.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 83.75 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 52.41 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 53.54 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 46.51 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 68.50 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.21 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 81.21 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 87.24 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 67.54 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.59 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.59 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1908 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 8.88 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.80 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.69 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.03 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.82 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.95 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 11.32 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 11.35 112 100.0 112 CRMSSC BURIED . . . . . . . . 10.04 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.77 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 10.12 240 100.0 240 CRMSALL BURIED . . . . . . . . 8.92 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.113 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 8.393 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 7.424 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.176 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 8.490 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 7.420 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.176 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 10.564 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 10.576 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 9.331 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.078 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 9.413 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 8.313 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 5 33 45 45 DISTCA CA (P) 0.00 0.00 2.22 11.11 73.33 45 DISTCA CA (RMS) 0.00 0.00 2.78 3.51 7.01 DISTCA ALL (N) 0 1 9 38 214 345 345 DISTALL ALL (P) 0.00 0.29 2.61 11.01 62.03 345 DISTALL ALL (RMS) 0.00 1.63 2.55 3.82 6.97 DISTALL END of the results output