####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS409_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS409_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 96 - 105 4.86 68.93 LONGEST_CONTINUOUS_SEGMENT: 10 103 - 112 4.81 56.09 LONGEST_CONTINUOUS_SEGMENT: 10 104 - 113 4.46 54.99 LONGEST_CONTINUOUS_SEGMENT: 10 105 - 114 4.69 54.02 LONGEST_CONTINUOUS_SEGMENT: 10 126 - 135 4.43 58.52 LONGEST_CONTINUOUS_SEGMENT: 10 127 - 136 4.88 60.16 LCS_AVERAGE: 21.14 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 99 - 104 1.84 69.32 LONGEST_CONTINUOUS_SEGMENT: 6 100 - 105 1.51 69.11 LONGEST_CONTINUOUS_SEGMENT: 6 108 - 113 1.58 53.19 LONGEST_CONTINUOUS_SEGMENT: 6 109 - 114 1.71 52.38 LONGEST_CONTINUOUS_SEGMENT: 6 116 - 121 1.59 40.88 LONGEST_CONTINUOUS_SEGMENT: 6 126 - 131 1.67 56.27 LONGEST_CONTINUOUS_SEGMENT: 6 127 - 132 1.90 56.68 LCS_AVERAGE: 11.56 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.82 70.02 LONGEST_CONTINUOUS_SEGMENT: 5 110 - 114 0.79 52.82 LONGEST_CONTINUOUS_SEGMENT: 5 116 - 120 0.88 41.26 LCS_AVERAGE: 8.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 10 3 3 3 3 3 3 4 6 7 7 9 9 9 9 10 10 10 10 10 10 LCS_GDT A 97 A 97 3 5 10 3 3 3 4 5 5 5 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT R 98 R 98 3 5 10 3 3 3 4 5 5 5 6 7 7 9 9 9 9 10 10 10 10 10 11 LCS_GDT G 99 G 99 3 6 10 3 3 3 4 5 5 6 7 7 7 9 9 9 10 10 10 10 10 10 11 LCS_GDT W 100 W 100 5 6 10 3 4 5 5 6 6 6 7 7 7 9 9 9 10 10 10 10 10 10 11 LCS_GDT E 101 E 101 5 6 10 4 4 5 5 6 6 6 7 7 7 9 9 9 10 10 10 10 10 11 11 LCS_GDT C 102 C 102 5 6 10 4 4 5 5 6 6 6 7 7 7 9 9 9 10 10 10 10 10 11 11 LCS_GDT T 103 T 103 5 6 10 4 4 5 5 6 6 6 7 7 7 9 9 9 10 10 10 10 11 11 11 LCS_GDT K 104 K 104 5 6 10 4 4 5 5 6 6 6 7 8 8 9 9 10 10 10 11 11 11 11 11 LCS_GDT D 105 D 105 3 6 10 3 3 4 5 6 6 6 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT R 106 R 106 3 4 10 3 3 4 4 4 4 6 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT C 107 C 107 4 5 10 3 3 4 5 5 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT G 108 G 108 4 6 10 3 3 4 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT E 109 E 109 4 6 10 3 3 4 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT V 110 V 110 5 6 10 4 4 5 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT R 111 R 111 5 6 10 4 4 5 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT N 112 N 112 5 6 10 4 4 5 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT E 113 E 113 5 6 10 4 4 5 6 6 6 7 7 8 8 8 9 10 10 10 11 11 11 11 11 LCS_GDT E 114 E 114 5 6 10 3 4 5 5 5 6 7 7 8 8 8 8 8 9 10 11 11 11 11 11 LCS_GDT N 115 N 115 4 4 9 3 3 4 4 4 5 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT A 116 A 116 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT C 117 C 117 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT H 118 H 118 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT C 119 C 119 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT S 120 S 120 5 6 9 3 3 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT E 121 E 121 4 6 9 3 3 4 4 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT D 122 D 122 4 4 9 3 3 4 4 4 5 6 6 7 7 7 8 8 9 9 10 10 11 11 11 LCS_GDT C 123 C 123 3 4 9 3 3 3 4 4 4 6 6 7 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT L 124 L 124 3 4 9 3 3 3 4 4 4 6 6 7 7 7 7 8 9 9 10 10 11 11 11 LCS_GDT S 125 S 125 3 4 9 0 3 3 3 5 5 6 7 7 8 8 8 8 8 9 10 10 11 12 12 LCS_GDT R 126 R 126 3 6 10 0 3 5 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT G 127 G 127 4 6 10 3 4 5 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT D 128 D 128 4 6 10 3 4 5 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT C 129 C 129 4 6 10 3 4 5 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT C 130 C 130 4 6 10 3 4 5 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT T 131 T 131 3 6 10 3 3 4 5 6 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT N 132 N 132 3 6 10 0 3 3 5 5 7 7 7 7 8 8 9 10 10 10 11 11 11 12 12 LCS_GDT Y 133 Y 133 3 4 10 1 3 3 4 4 4 5 6 6 7 8 9 10 10 10 11 11 11 12 12 LCS_GDT Q 134 Q 134 3 4 10 0 3 3 4 4 4 5 6 6 7 8 8 10 10 10 11 11 11 12 12 LCS_GDT V 135 V 135 3 3 10 0 3 3 3 3 4 5 6 6 7 8 9 10 10 10 11 11 11 12 12 LCS_GDT V 136 V 136 3 3 10 3 3 3 3 3 4 4 5 6 7 7 7 9 9 10 11 11 11 12 12 LCS_GDT C 137 C 137 3 4 8 3 3 3 3 4 4 4 5 5 7 7 7 8 8 9 9 10 10 11 12 LCS_GDT K 138 K 138 3 4 8 3 3 3 3 4 4 4 5 5 5 5 6 8 8 9 9 10 10 10 12 LCS_GDT G 139 G 139 3 4 7 0 3 3 3 4 4 4 5 5 5 5 6 7 7 9 9 10 10 10 12 LCS_GDT E 140 E 140 3 4 6 0 3 3 3 4 4 4 5 5 5 5 5 5 5 5 5 7 8 8 8 LCS_AVERAGE LCS_A: 13.78 ( 8.64 11.56 21.14 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 6 6 7 7 7 8 8 9 9 10 10 10 11 11 11 12 12 GDT PERCENT_AT 8.89 8.89 11.11 13.33 13.33 15.56 15.56 15.56 17.78 17.78 20.00 20.00 22.22 22.22 22.22 24.44 24.44 24.44 26.67 26.67 GDT RMS_LOCAL 0.37 0.37 0.79 1.58 1.51 2.04 2.04 2.04 2.79 2.79 4.18 3.87 4.46 4.46 4.43 5.11 5.11 5.11 5.86 5.86 GDT RMS_ALL_AT 70.34 70.34 52.82 53.19 69.11 56.46 56.46 56.46 53.52 53.52 68.02 58.34 54.99 54.99 58.52 59.80 59.80 59.80 59.68 59.68 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 109 E 109 # possible swapping detected: D 122 D 122 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 106.410 0 0.704 0.843 107.211 0.000 0.000 LGA A 97 A 97 103.615 0 0.133 0.125 104.301 0.000 0.000 LGA R 98 R 98 103.674 0 0.670 1.546 107.261 0.000 0.000 LGA G 99 G 99 101.345 0 0.279 0.279 101.905 0.000 0.000 LGA W 100 W 100 99.125 0 0.653 1.239 100.135 0.000 0.000 LGA E 101 E 101 97.800 0 0.042 1.059 100.951 0.000 0.000 LGA C 102 C 102 94.614 0 0.059 0.156 95.800 0.000 0.000 LGA T 103 T 103 93.370 0 0.055 1.266 93.425 0.000 0.000 LGA K 104 K 104 91.743 0 0.641 0.996 93.895 0.000 0.000 LGA D 105 D 105 86.343 0 0.690 1.132 88.432 0.000 0.000 LGA R 106 R 106 80.212 0 0.655 1.581 82.592 0.000 0.000 LGA C 107 C 107 77.147 0 0.129 0.859 79.427 0.000 0.000 LGA G 108 G 108 70.793 0 0.662 0.662 72.799 0.000 0.000 LGA E 109 E 109 65.856 0 0.048 1.282 67.709 0.000 0.000 LGA V 110 V 110 59.536 0 0.042 0.073 62.019 0.000 0.000 LGA R 111 R 111 53.868 0 0.112 0.860 55.581 0.000 0.000 LGA N 112 N 112 50.721 0 0.109 1.036 54.128 0.000 0.000 LGA E 113 E 113 44.579 0 0.694 1.284 46.548 0.000 0.000 LGA E 114 E 114 43.841 0 0.699 0.948 45.087 0.000 0.000 LGA N 115 N 115 43.993 0 0.057 0.866 45.120 0.000 0.000 LGA A 116 A 116 40.919 0 0.607 0.604 42.337 0.000 0.000 LGA C 117 C 117 38.484 0 0.095 0.729 39.940 0.000 0.000 LGA H 118 H 118 34.793 0 0.074 0.238 36.166 0.000 0.000 LGA C 119 C 119 34.472 0 0.612 0.540 38.105 0.000 0.000 LGA S 120 S 120 28.421 0 0.051 0.674 30.329 0.000 0.000 LGA E 121 E 121 26.015 0 0.672 1.128 30.162 0.000 0.000 LGA D 122 D 122 18.577 0 0.602 1.104 21.355 0.000 0.000 LGA C 123 C 123 16.605 0 0.661 0.829 21.019 0.000 0.000 LGA L 124 L 124 13.483 0 0.615 0.614 17.384 0.000 0.000 LGA S 125 S 125 8.371 0 0.708 0.819 9.939 17.143 12.143 LGA R 126 R 126 2.407 0 0.686 1.334 10.681 58.452 30.476 LGA G 127 G 127 2.112 0 0.418 0.418 3.117 63.095 63.095 LGA D 128 D 128 0.869 0 0.363 1.283 3.304 81.786 78.810 LGA C 129 C 129 1.046 0 0.041 0.714 3.451 85.952 79.206 LGA C 130 C 130 1.100 0 0.090 0.149 3.517 81.548 73.730 LGA T 131 T 131 2.722 0 0.677 1.413 5.676 65.119 50.068 LGA N 132 N 132 2.918 0 0.646 1.112 4.560 50.595 48.869 LGA Y 133 Y 133 8.557 0 0.584 0.818 16.757 4.167 1.389 LGA Q 134 Q 134 12.050 0 0.665 0.693 20.669 0.000 0.000 LGA V 135 V 135 10.555 0 0.597 0.624 12.887 0.000 1.429 LGA V 136 V 136 15.382 0 0.651 1.467 17.392 0.000 0.000 LGA C 137 C 137 21.740 0 0.703 0.827 25.011 0.000 0.000 LGA K 138 K 138 24.723 0 0.650 1.095 32.067 0.000 0.000 LGA G 139 G 139 23.885 0 0.697 0.697 24.388 0.000 0.000 LGA E 140 E 140 26.484 0 0.076 0.977 31.647 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 38.435 38.440 38.663 11.286 9.760 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 7 2.04 15.556 14.858 0.327 LGA_LOCAL RMSD: 2.044 Number of atoms: 7 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 56.465 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 38.435 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.149600 * X + -0.987414 * Y + -0.051324 * Z + -70.469604 Y_new = -0.805209 * X + 0.091541 * Y + 0.585883 * Z + 64.725517 Z_new = -0.573811 * X + 0.128975 * Y + -0.808769 * Z + 26.961617 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.754492 0.611151 2.983454 [DEG: -100.5250 35.0164 170.9393 ] ZXZ: -3.054214 2.512852 -1.349702 [DEG: -174.9936 143.9758 -77.3322 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS409_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS409_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 7 2.04 14.858 38.43 REMARK ---------------------------------------------------------- MOLECULE T0543TS409_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2rh6A ATOM 728 N THR 96 115.927 48.200 5.710 1.00310.84 N ATOM 729 CA THR 96 114.619 47.623 5.767 1.00310.84 C ATOM 730 CB THR 96 114.250 47.111 7.127 1.00310.84 C ATOM 731 OG1 THR 96 113.033 46.383 7.065 1.00310.84 O ATOM 732 CG2 THR 96 114.108 48.309 8.081 1.00310.84 C ATOM 733 C THR 96 113.635 48.687 5.417 1.00310.84 C ATOM 734 O THR 96 113.846 49.863 5.707 1.00310.84 O ATOM 735 N ALA 97 112.529 48.293 4.755 1.00288.61 N ATOM 736 CA ALA 97 111.514 49.246 4.427 1.00288.61 C ATOM 737 CB ALA 97 111.537 49.694 2.956 1.00288.61 C ATOM 738 C ALA 97 110.204 48.571 4.662 1.00288.61 C ATOM 739 O ALA 97 110.070 47.368 4.447 1.00288.61 O ATOM 740 N ARG 98 109.200 49.332 5.137 1.00346.64 N ATOM 741 CA ARG 98 107.916 48.738 5.360 1.00346.64 C ATOM 742 CB ARG 98 107.679 48.305 6.816 1.00346.64 C ATOM 743 CG ARG 98 106.305 47.669 7.046 1.00346.64 C ATOM 744 CD ARG 98 106.023 47.336 8.513 1.00346.64 C ATOM 745 NE ARG 98 107.021 46.317 8.942 1.00346.64 N ATOM 746 CZ ARG 98 107.205 46.060 10.270 1.00346.64 C ATOM 747 NH1 ARG 98 106.470 46.735 11.202 1.00346.64 H ATOM 748 NH2 ARG 98 108.123 45.132 10.667 1.00346.64 H ATOM 749 C ARG 98 106.883 49.769 5.050 1.00346.64 C ATOM 750 O ARG 98 107.119 50.966 5.210 1.00346.64 O ATOM 751 N GLY 99 105.707 49.323 4.572 1.00132.63 N ATOM 752 CA GLY 99 104.652 50.256 4.318 1.00132.63 C ATOM 753 C GLY 99 103.549 49.528 3.623 1.00132.63 C ATOM 754 O GLY 99 103.735 48.985 2.534 1.00132.63 O ATOM 755 N TRP 100 102.360 49.504 4.256 1.00341.77 N ATOM 756 CA TRP 100 101.218 48.884 3.655 1.00341.77 C ATOM 757 CB TRP 100 101.113 47.378 3.959 1.00341.77 C ATOM 758 CG TRP 100 99.917 46.694 3.343 1.00341.77 C ATOM 759 CD2 TRP 100 99.888 46.144 2.020 1.00341.77 C ATOM 760 CD1 TRP 100 98.683 46.460 3.885 1.00341.77 C ATOM 761 NE1 TRP 100 97.894 45.797 2.977 1.00341.77 N ATOM 762 CE2 TRP 100 98.621 45.596 1.822 1.00341.77 C ATOM 763 CE3 TRP 100 100.844 46.098 1.039 1.00341.77 C ATOM 764 CZ2 TRP 100 98.286 44.992 0.646 1.00341.77 C ATOM 765 CZ3 TRP 100 100.501 45.490 -0.147 1.00341.77 C ATOM 766 CH2 TRP 100 99.248 44.948 -0.341 1.00341.77 H ATOM 767 C TRP 100 100.023 49.548 4.256 1.00341.77 C ATOM 768 O TRP 100 100.028 49.894 5.435 1.00341.77 O ATOM 769 N GLU 101 98.966 49.770 3.452 1.00286.06 N ATOM 770 CA GLU 101 97.807 50.383 4.025 1.00286.06 C ATOM 771 CB GLU 101 97.798 51.916 3.901 1.00286.06 C ATOM 772 CG GLU 101 96.573 52.573 4.539 1.00286.06 C ATOM 773 CD GLU 101 96.726 52.478 6.050 1.00286.06 C ATOM 774 OE1 GLU 101 97.756 51.911 6.505 1.00286.06 O ATOM 775 OE2 GLU 101 95.817 52.970 6.769 1.00286.06 O ATOM 776 C GLU 101 96.605 49.880 3.298 1.00286.06 C ATOM 777 O GLU 101 96.615 49.742 2.075 1.00286.06 O ATOM 778 N CYS 102 95.534 49.566 4.052 1.00 78.99 N ATOM 779 CA CYS 102 94.314 49.148 3.434 1.00 78.99 C ATOM 780 CB CYS 102 94.163 47.623 3.311 1.00 78.99 C ATOM 781 SG CYS 102 95.339 46.900 2.129 1.00 78.99 S ATOM 782 C CYS 102 93.204 49.630 4.305 1.00 78.99 C ATOM 783 O CYS 102 93.264 49.502 5.527 1.00 78.99 O ATOM 784 N THR 103 92.164 50.225 3.696 1.00280.08 N ATOM 785 CA THR 103 91.058 50.674 4.485 1.00280.08 C ATOM 786 CB THR 103 91.000 52.165 4.645 1.00280.08 C ATOM 787 OG1 THR 103 89.986 52.518 5.573 1.00280.08 O ATOM 788 CG2 THR 103 90.711 52.797 3.272 1.00280.08 C ATOM 789 C THR 103 89.811 50.260 3.783 1.00280.08 C ATOM 790 O THR 103 89.742 50.278 2.554 1.00280.08 O ATOM 791 N LYS 104 88.788 49.850 4.556 1.00297.42 N ATOM 792 CA LYS 104 87.545 49.492 3.946 1.00297.42 C ATOM 793 CB LYS 104 87.194 47.995 4.082 1.00297.42 C ATOM 794 CG LYS 104 86.941 47.506 5.511 1.00297.42 C ATOM 795 CD LYS 104 85.573 47.898 6.075 1.00297.42 C ATOM 796 CE LYS 104 84.423 47.050 5.530 1.00297.42 C ATOM 797 NZ LYS 104 83.141 47.493 6.126 1.00297.42 N ATOM 798 C LYS 104 86.494 50.300 4.629 1.00297.42 C ATOM 799 O LYS 104 86.515 50.461 5.848 1.00297.42 O ATOM 800 N ASP 105 85.566 50.876 3.844 1.00233.62 N ATOM 801 CA ASP 105 84.524 51.651 4.445 1.00233.62 C ATOM 802 CB ASP 105 84.688 53.169 4.258 1.00233.62 C ATOM 803 CG ASP 105 84.614 53.480 2.769 1.00233.62 C ATOM 804 OD1 ASP 105 85.106 52.647 1.963 1.00233.62 O ATOM 805 OD2 ASP 105 84.069 54.561 2.421 1.00233.62 O ATOM 806 C ASP 105 83.237 51.255 3.806 1.00233.62 C ATOM 807 O ASP 105 83.146 51.154 2.583 1.00233.62 O ATOM 808 N ARG 106 82.205 50.998 4.627 1.00286.05 N ATOM 809 CA ARG 106 80.931 50.662 4.067 1.00286.05 C ATOM 810 CB ARG 106 80.276 49.425 4.706 1.00286.05 C ATOM 811 CG ARG 106 78.915 49.080 4.097 1.00286.05 C ATOM 812 CD ARG 106 78.997 48.633 2.635 1.00286.05 C ATOM 813 NE ARG 106 79.616 47.279 2.613 1.00286.05 N ATOM 814 CZ ARG 106 79.719 46.595 1.435 1.00286.05 C ATOM 815 NH1 ARG 106 79.257 47.154 0.280 1.00286.05 H ATOM 816 NH2 ARG 106 80.282 45.351 1.415 1.00286.05 H ATOM 817 C ARG 106 80.041 51.827 4.332 1.00286.05 C ATOM 818 O ARG 106 79.978 52.332 5.452 1.00286.05 O ATOM 819 N CYS 107 79.336 52.303 3.288 1.00 91.80 N ATOM 820 CA CYS 107 78.480 53.430 3.486 1.00 91.80 C ATOM 821 CB CYS 107 78.943 54.692 2.737 1.00 91.80 C ATOM 822 SG CYS 107 78.937 54.472 0.932 1.00 91.80 S ATOM 823 C CYS 107 77.128 53.082 2.964 1.00 91.80 C ATOM 824 O CYS 107 76.979 52.211 2.107 1.00 91.80 O ATOM 825 N GLY 108 76.095 53.753 3.504 1.00105.14 N ATOM 826 CA GLY 108 74.753 53.538 3.058 1.00105.14 C ATOM 827 C GLY 108 73.868 54.227 4.041 1.00105.14 C ATOM 828 O GLY 108 74.151 54.241 5.238 1.00105.14 O ATOM 829 N GLU 109 72.761 54.818 3.558 1.00302.75 N ATOM 830 CA GLU 109 71.882 55.484 4.470 1.00302.75 C ATOM 831 CB GLU 109 72.059 57.012 4.487 1.00302.75 C ATOM 832 CG GLU 109 71.175 57.716 5.518 1.00302.75 C ATOM 833 CD GLU 109 71.766 57.454 6.896 1.00302.75 C ATOM 834 OE1 GLU 109 72.834 56.790 6.965 1.00302.75 O ATOM 835 OE2 GLU 109 71.158 57.917 7.899 1.00302.75 O ATOM 836 C GLU 109 70.483 55.210 4.037 1.00302.75 C ATOM 837 O GLU 109 70.195 55.118 2.844 1.00302.75 O ATOM 838 N VAL 110 69.573 55.050 5.016 1.00131.57 N ATOM 839 CA VAL 110 68.195 54.841 4.696 1.00131.57 C ATOM 840 CB VAL 110 67.685 53.483 5.077 1.00131.57 C ATOM 841 CG1 VAL 110 67.774 53.341 6.607 1.00131.57 C ATOM 842 CG2 VAL 110 66.258 53.324 4.524 1.00131.57 C ATOM 843 C VAL 110 67.426 55.843 5.488 1.00131.57 C ATOM 844 O VAL 110 67.783 56.152 6.624 1.00131.57 O ATOM 845 N ARG 111 66.353 56.400 4.897 1.00320.20 N ATOM 846 CA ARG 111 65.585 57.365 5.622 1.00320.20 C ATOM 847 CB ARG 111 65.802 58.807 5.135 1.00320.20 C ATOM 848 CG ARG 111 64.985 59.848 5.904 1.00320.20 C ATOM 849 CD ARG 111 65.257 61.283 5.448 1.00320.20 C ATOM 850 NE ARG 111 66.683 61.580 5.765 1.00320.20 N ATOM 851 CZ ARG 111 67.315 62.628 5.164 1.00320.20 C ATOM 852 NH1 ARG 111 66.644 63.414 4.272 1.00320.20 H ATOM 853 NH2 ARG 111 68.623 62.892 5.453 1.00320.20 H ATOM 854 C ARG 111 64.145 57.035 5.424 1.00320.20 C ATOM 855 O ARG 111 63.754 56.514 4.380 1.00320.20 O ATOM 856 N ASN 112 63.315 57.315 6.446 1.00244.05 N ATOM 857 CA ASN 112 61.916 57.046 6.323 1.00244.05 C ATOM 858 CB ASN 112 61.389 56.031 7.352 1.00244.05 C ATOM 859 CG ASN 112 62.010 54.678 7.037 1.00244.05 C ATOM 860 OD1 ASN 112 62.587 54.029 7.910 1.00244.05 O ATOM 861 ND2 ASN 112 61.892 54.237 5.757 1.00244.05 N ATOM 862 C ASN 112 61.202 58.332 6.570 1.00244.05 C ATOM 863 O ASN 112 61.602 59.121 7.426 1.00244.05 O ATOM 864 N GLU 113 60.128 58.587 5.800 1.00265.39 N ATOM 865 CA GLU 113 59.387 59.795 6.002 1.00265.39 C ATOM 866 CB GLU 113 59.306 60.687 4.750 1.00265.39 C ATOM 867 CG GLU 113 58.607 60.016 3.566 1.00265.39 C ATOM 868 CD GLU 113 58.596 61.002 2.407 1.00265.39 C ATOM 869 OE1 GLU 113 59.209 62.091 2.553 1.00265.39 O ATOM 870 OE2 GLU 113 57.974 60.677 1.360 1.00265.39 O ATOM 871 C GLU 113 57.992 59.401 6.354 1.00265.39 C ATOM 872 O GLU 113 57.427 58.482 5.764 1.00265.39 O ATOM 873 N GLU 114 57.408 60.082 7.357 1.00256.51 N ATOM 874 CA GLU 114 56.065 59.778 7.745 1.00256.51 C ATOM 875 CB GLU 114 55.721 60.213 9.181 1.00256.51 C ATOM 876 CG GLU 114 56.448 59.398 10.252 1.00256.51 C ATOM 877 CD GLU 114 57.923 59.765 10.200 1.00256.51 C ATOM 878 OE1 GLU 114 58.227 60.981 10.071 1.00256.51 O ATOM 879 OE2 GLU 114 58.768 58.833 10.284 1.00256.51 O ATOM 880 C GLU 114 55.155 60.514 6.821 1.00256.51 C ATOM 881 O GLU 114 55.501 61.574 6.304 1.00256.51 O ATOM 882 N ASN 115 53.963 59.943 6.572 1.00274.79 N ATOM 883 CA ASN 115 53.016 60.596 5.721 1.00274.79 C ATOM 884 CB ASN 115 52.590 59.754 4.507 1.00274.79 C ATOM 885 CG ASN 115 51.664 60.604 3.648 1.00274.79 C ATOM 886 OD1 ASN 115 52.082 61.604 3.066 1.00274.79 O ATOM 887 ND2 ASN 115 50.371 60.195 3.563 1.00274.79 N ATOM 888 C ASN 115 51.796 60.837 6.542 1.00274.79 C ATOM 889 O ASN 115 51.424 60.012 7.375 1.00274.79 O ATOM 890 N ALA 116 51.148 61.998 6.342 1.00240.53 N ATOM 891 CA ALA 116 49.965 62.285 7.093 1.00240.53 C ATOM 892 CB ALA 116 50.096 63.513 8.007 1.00240.53 C ATOM 893 C ALA 116 48.880 62.579 6.114 1.00240.53 C ATOM 894 O ALA 116 49.126 63.137 5.044 1.00240.53 O ATOM 895 N CYS 117 47.640 62.185 6.456 1.00111.31 N ATOM 896 CA CYS 117 46.539 62.449 5.581 1.00111.31 C ATOM 897 CB CYS 117 45.694 61.204 5.264 1.00111.31 C ATOM 898 SG CYS 117 44.303 61.569 4.152 1.00111.31 S ATOM 899 C CYS 117 45.653 63.418 6.289 1.00111.31 C ATOM 900 O CYS 117 45.565 63.413 7.517 1.00111.31 O ATOM 901 N HIS 118 44.985 64.299 5.523 1.00207.30 N ATOM 902 CA HIS 118 44.109 65.250 6.136 1.00207.30 C ATOM 903 ND1 HIS 118 46.890 67.045 5.502 1.00207.30 N ATOM 904 CG HIS 118 45.709 67.218 6.189 1.00207.30 C ATOM 905 CB HIS 118 44.379 66.707 5.720 1.00207.30 C ATOM 906 NE2 HIS 118 47.387 68.189 7.344 1.00207.30 N ATOM 907 CD2 HIS 118 46.030 67.918 7.311 1.00207.30 C ATOM 908 CE1 HIS 118 47.861 67.645 6.238 1.00207.30 C ATOM 909 C HIS 118 42.724 64.918 5.692 1.00207.30 C ATOM 910 O HIS 118 42.499 64.558 4.539 1.00207.30 O ATOM 911 N CYS 119 41.757 65.012 6.622 1.00 59.32 N ATOM 912 CA CYS 119 40.400 64.719 6.278 1.00 59.32 C ATOM 913 CB CYS 119 39.770 63.612 7.142 1.00 59.32 C ATOM 914 SG CYS 119 40.582 62.003 6.913 1.00 59.32 S ATOM 915 C CYS 119 39.609 65.963 6.511 1.00 59.32 C ATOM 916 O CYS 119 40.018 66.836 7.275 1.00 59.32 O ATOM 917 N SER 120 38.459 66.083 5.825 1.00180.46 N ATOM 918 CA SER 120 37.632 67.238 6.011 1.00180.46 C ATOM 919 CB SER 120 37.506 68.115 4.755 1.00180.46 C ATOM 920 OG SER 120 36.675 69.235 5.023 1.00180.46 O ATOM 921 C SER 120 36.265 66.742 6.341 1.00180.46 C ATOM 922 O SER 120 35.866 65.659 5.915 1.00180.46 O ATOM 923 N GLU 121 35.514 67.524 7.139 1.00277.93 N ATOM 924 CA GLU 121 34.186 67.117 7.481 1.00277.93 C ATOM 925 CB GLU 121 33.938 67.031 8.998 1.00277.93 C ATOM 926 CG GLU 121 32.531 66.550 9.354 1.00277.93 C ATOM 927 CD GLU 121 32.454 65.063 9.034 1.00277.93 C ATOM 928 OE1 GLU 121 33.485 64.503 8.575 1.00277.93 O ATOM 929 OE2 GLU 121 31.364 64.467 9.247 1.00277.93 O ATOM 930 C GLU 121 33.257 68.148 6.935 1.00277.93 C ATOM 931 O GLU 121 33.508 69.346 7.047 1.00277.93 O ATOM 932 N ASP 122 32.157 67.698 6.305 1.00149.37 N ATOM 933 CA ASP 122 31.219 68.629 5.758 1.00149.37 C ATOM 934 CB ASP 122 30.855 68.343 4.290 1.00149.37 C ATOM 935 CG ASP 122 32.078 68.647 3.436 1.00149.37 C ATOM 936 OD1 ASP 122 32.966 69.398 3.920 1.00149.37 O ATOM 937 OD2 ASP 122 32.139 68.133 2.287 1.00149.37 O ATOM 938 C ASP 122 29.961 68.523 6.552 1.00149.37 C ATOM 939 O ASP 122 29.382 67.445 6.676 1.00149.37 O ATOM 940 N CYS 123 29.517 69.651 7.136 1.00 66.30 N ATOM 941 CA CYS 123 28.293 69.634 7.878 1.00 66.30 C ATOM 942 CB CYS 123 28.392 70.319 9.252 1.00 66.30 C ATOM 943 SG CYS 123 29.523 69.455 10.383 1.00 66.30 S ATOM 944 C CYS 123 27.306 70.407 7.070 1.00 66.30 C ATOM 945 O CYS 123 27.579 71.531 6.652 1.00 66.30 O ATOM 946 N LEU 124 26.127 69.812 6.808 1.00214.93 N ATOM 947 CA LEU 124 25.150 70.512 6.033 1.00214.93 C ATOM 948 CB LEU 124 24.801 69.814 4.707 1.00214.93 C ATOM 949 CG LEU 124 25.990 69.710 3.736 1.00214.93 C ATOM 950 CD1 LEU 124 25.588 69.008 2.429 1.00214.93 C ATOM 951 CD2 LEU 124 26.645 71.080 3.504 1.00214.93 C ATOM 952 C LEU 124 23.895 70.587 6.835 1.00214.93 C ATOM 953 O LEU 124 23.526 69.642 7.529 1.00214.93 O ATOM 954 N SER 125 23.214 71.748 6.771 1.00185.46 N ATOM 955 CA SER 125 21.964 71.902 7.455 1.00185.46 C ATOM 956 CB SER 125 21.996 72.952 8.577 1.00185.46 C ATOM 957 OG SER 125 20.721 73.040 9.198 1.00185.46 O ATOM 958 C SER 125 20.994 72.381 6.430 1.00185.46 C ATOM 959 O SER 125 21.346 73.169 5.555 1.00185.46 O ATOM 960 N ARG 126 19.739 71.901 6.495 1.00262.12 N ATOM 961 CA ARG 126 18.799 72.339 5.512 1.00262.12 C ATOM 962 CB ARG 126 18.639 71.348 4.345 1.00262.12 C ATOM 963 CG ARG 126 17.640 71.792 3.275 1.00262.12 C ATOM 964 CD ARG 126 17.506 70.792 2.125 1.00262.12 C ATOM 965 NE ARG 126 16.472 71.313 1.187 1.00262.12 N ATOM 966 CZ ARG 126 15.171 70.926 1.327 1.00262.12 C ATOM 967 NH1 ARG 126 14.821 70.063 2.325 1.00262.12 H ATOM 968 NH2 ARG 126 14.220 71.398 0.469 1.00262.12 H ATOM 969 C ARG 126 17.462 72.494 6.154 1.00262.12 C ATOM 970 O ARG 126 17.102 71.751 7.065 1.00262.12 O ATOM 971 N GLY 127 16.702 73.505 5.692 1.00 93.23 N ATOM 972 CA GLY 127 15.364 73.725 6.156 1.00 93.23 C ATOM 973 C GLY 127 15.396 74.755 7.235 1.00 93.23 C ATOM 974 O GLY 127 15.977 74.541 8.297 1.00 93.23 O ATOM 975 N ASP 128 14.753 75.910 6.976 1.00140.06 N ATOM 976 CA ASP 128 14.653 76.942 7.963 1.00140.06 C ATOM 977 CB ASP 128 15.896 77.846 8.041 1.00140.06 C ATOM 978 CG ASP 128 17.026 77.051 8.681 1.00140.06 C ATOM 979 OD1 ASP 128 16.787 76.451 9.763 1.00140.06 O ATOM 980 OD2 ASP 128 18.146 77.041 8.103 1.00140.06 O ATOM 981 C ASP 128 13.509 77.808 7.551 1.00140.06 C ATOM 982 O ASP 128 13.704 78.823 6.884 1.00140.06 O ATOM 983 N CYS 129 12.273 77.428 7.925 1.00 82.38 N ATOM 984 CA CYS 129 11.169 78.245 7.526 1.00 82.38 C ATOM 985 CB CYS 129 10.371 77.664 6.348 1.00 82.38 C ATOM 986 SG CYS 129 9.590 76.074 6.759 1.00 82.38 S ATOM 987 C CYS 129 10.226 78.360 8.675 1.00 82.38 C ATOM 988 O CYS 129 10.036 77.414 9.439 1.00 82.38 O ATOM 989 N CYS 130 9.624 79.554 8.835 1.00 53.19 N ATOM 990 CA CYS 130 8.649 79.753 9.865 1.00 53.19 C ATOM 991 CB CYS 130 9.150 80.628 11.027 1.00 53.19 C ATOM 992 SG CYS 130 10.531 79.863 11.928 1.00 53.19 S ATOM 993 C CYS 130 7.516 80.482 9.223 1.00 53.19 C ATOM 994 O CYS 130 7.728 81.466 8.515 1.00 53.19 O ATOM 995 N THR 131 6.274 80.006 9.431 1.00277.08 N ATOM 996 CA THR 131 5.172 80.693 8.828 1.00277.08 C ATOM 997 CB THR 131 4.583 79.967 7.654 1.00277.08 C ATOM 998 OG1 THR 131 3.627 80.787 6.999 1.00277.08 O ATOM 999 CG2 THR 131 3.923 78.672 8.156 1.00277.08 C ATOM 1000 C THR 131 4.088 80.833 9.843 1.00277.08 C ATOM 1001 O THR 131 3.908 79.970 10.702 1.00277.08 O ATOM 1002 N ASN 132 3.349 81.956 9.778 1.00220.02 N ATOM 1003 CA ASN 132 2.244 82.159 10.665 1.00220.02 C ATOM 1004 CB ASN 132 2.495 83.243 11.727 1.00220.02 C ATOM 1005 CG ASN 132 3.554 82.723 12.688 1.00220.02 C ATOM 1006 OD1 ASN 132 4.618 83.321 12.844 1.00220.02 O ATOM 1007 ND2 ASN 132 3.257 81.575 13.354 1.00220.02 N ATOM 1008 C ASN 132 1.108 82.624 9.816 1.00220.02 C ATOM 1009 O ASN 132 1.296 83.437 8.911 1.00220.02 O ATOM 1010 N TYR 133 -0.107 82.103 10.069 1.00308.52 N ATOM 1011 CA TYR 133 -1.219 82.530 9.276 1.00308.52 C ATOM 1012 CB TYR 133 -1.727 81.449 8.306 1.00308.52 C ATOM 1013 CG TYR 133 -2.735 82.079 7.407 1.00308.52 C ATOM 1014 CD1 TYR 133 -2.322 82.804 6.312 1.00308.52 C ATOM 1015 CD2 TYR 133 -4.082 81.944 7.648 1.00308.52 C ATOM 1016 CE1 TYR 133 -3.238 83.391 5.471 1.00308.52 C ATOM 1017 CE2 TYR 133 -5.002 82.530 6.810 1.00308.52 C ATOM 1018 CZ TYR 133 -4.582 83.254 5.721 1.00308.52 C ATOM 1019 OH TYR 133 -5.527 83.853 4.862 1.00308.52 H ATOM 1020 C TYR 133 -2.332 82.853 10.219 1.00308.52 C ATOM 1021 O TYR 133 -2.456 82.238 11.278 1.00308.52 O ATOM 1022 N GLN 134 -3.164 83.853 9.866 1.00237.16 N ATOM 1023 CA GLN 134 -4.256 84.208 10.726 1.00237.16 C ATOM 1024 CB GLN 134 -4.217 85.675 11.186 1.00237.16 C ATOM 1025 CG GLN 134 -5.377 86.068 12.101 1.00237.16 C ATOM 1026 CD GLN 134 -5.202 87.534 12.471 1.00237.16 C ATOM 1027 OE1 GLN 134 -4.305 88.213 11.972 1.00237.16 O ATOM 1028 NE2 GLN 134 -6.082 88.040 13.376 1.00237.16 N ATOM 1029 C GLN 134 -5.514 84.019 9.943 1.00237.16 C ATOM 1030 O GLN 134 -5.582 84.368 8.766 1.00237.16 O ATOM 1031 N VAL 135 -6.552 83.441 10.580 1.00 44.07 N ATOM 1032 CA VAL 135 -7.786 83.235 9.882 1.00 44.07 C ATOM 1033 CB VAL 135 -8.052 81.797 9.550 1.00 44.07 C ATOM 1034 CG1 VAL 135 -9.434 81.696 8.883 1.00 44.07 C ATOM 1035 CG2 VAL 135 -6.896 81.267 8.685 1.00 44.07 C ATOM 1036 C VAL 135 -8.900 83.676 10.776 1.00 44.07 C ATOM 1037 O VAL 135 -8.802 83.585 11.998 1.00 44.07 O ATOM 1038 N VAL 136 -9.989 84.194 10.174 1.00 80.05 N ATOM 1039 CA VAL 136 -11.125 84.591 10.952 1.00 80.05 C ATOM 1040 CB VAL 136 -11.167 86.062 11.244 1.00 80.05 C ATOM 1041 CG1 VAL 136 -9.942 86.425 12.102 1.00 80.05 C ATOM 1042 CG2 VAL 136 -11.244 86.825 9.911 1.00 80.05 C ATOM 1043 C VAL 136 -12.342 84.268 10.150 1.00 80.05 C ATOM 1044 O VAL 136 -12.312 84.295 8.921 1.00 80.05 O ATOM 1045 N CYS 137 -13.453 83.926 10.832 1.00 90.42 N ATOM 1046 CA CYS 137 -14.670 83.640 10.129 1.00 90.42 C ATOM 1047 CB CYS 137 -14.946 82.137 9.964 1.00 90.42 C ATOM 1048 SG CYS 137 -16.493 81.809 9.067 1.00 90.42 S ATOM 1049 C CYS 137 -15.790 84.211 10.935 1.00 90.42 C ATOM 1050 O CYS 137 -15.753 84.187 12.164 1.00 90.42 O ATOM 1051 N LYS 138 -16.815 84.764 10.258 1.00249.76 N ATOM 1052 CA LYS 138 -17.926 85.305 10.984 1.00249.76 C ATOM 1053 CB LYS 138 -17.709 86.758 11.440 1.00249.76 C ATOM 1054 CG LYS 138 -17.529 87.744 10.284 1.00249.76 C ATOM 1055 CD LYS 138 -17.606 89.210 10.716 1.00249.76 C ATOM 1056 CE LYS 138 -19.007 89.648 11.150 1.00249.76 C ATOM 1057 NZ LYS 138 -18.990 91.073 11.549 1.00249.76 N ATOM 1058 C LYS 138 -19.121 85.294 10.084 1.00249.76 C ATOM 1059 O LYS 138 -18.992 85.268 8.862 1.00249.76 O ATOM 1060 N GLY 139 -20.330 85.287 10.684 1.00135.74 N ATOM 1061 CA GLY 139 -21.534 85.329 9.907 1.00135.74 C ATOM 1062 C GLY 139 -22.670 84.982 10.814 1.00135.74 C ATOM 1063 O GLY 139 -22.523 84.165 11.723 1.00135.74 O ATOM 1064 N GLU 140 -23.847 85.602 10.586 1.00327.22 N ATOM 1065 CA GLU 140 -24.986 85.305 11.404 1.00327.22 C ATOM 1066 CB GLU 140 -25.022 86.106 12.717 1.00327.22 C ATOM 1067 CG GLU 140 -26.130 85.665 13.674 1.00327.22 C ATOM 1068 CD GLU 140 -25.691 84.360 14.323 1.00327.22 C ATOM 1069 OE1 GLU 140 -24.567 83.888 14.003 1.00327.22 O ATOM 1070 OE2 GLU 140 -26.473 83.817 15.149 1.00327.22 O ATOM 1071 C GLU 140 -26.210 85.677 10.628 1.00327.22 C ATOM 1072 O GLU 140 -26.161 86.540 9.753 1.00327.22 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 95.73 27.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 102.86 19.4 62 100.0 62 ARMSMC BURIED . . . . . . . . 76.09 46.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 105.64 28.2 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 108.01 25.0 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 111.61 19.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 92.54 46.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 95.35 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 94.73 27.8 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 98.24 25.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 88.39 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.56 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 59.55 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 66.46 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 11.78 100.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.65 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 96.65 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 107.76 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 69.30 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 38.43 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 38.43 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.8541 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 41.77 32 100.0 32 CRMSCA BURIED . . . . . . . . 28.61 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 38.33 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 41.70 156 100.0 156 CRMSMC BURIED . . . . . . . . 28.64 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 38.97 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 39.85 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 42.28 112 100.0 112 CRMSSC BURIED . . . . . . . . 30.82 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 38.69 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 42.03 240 100.0 240 CRMSALL BURIED . . . . . . . . 29.70 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 170.657 0.677 0.708 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 172.170 0.652 0.692 32 100.0 32 ERRCA BURIED . . . . . . . . 166.932 0.737 0.745 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 172.402 0.680 0.709 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 174.699 0.657 0.695 156 100.0 156 ERRMC BURIED . . . . . . . . 166.890 0.735 0.744 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 208.044 0.728 0.752 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 214.470 0.733 0.759 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 206.984 0.708 0.736 112 100.0 112 ERRSC BURIED . . . . . . . . 210.284 0.772 0.786 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 188.561 0.702 0.729 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 188.407 0.678 0.712 240 100.0 240 ERRALL BURIED . . . . . . . . 188.911 0.755 0.767 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 8 45 45 DISTCA CA (P) 0.00 0.00 0.00 8.89 17.78 45 DISTCA CA (RMS) 0.00 0.00 0.00 3.80 5.82 DISTCA ALL (N) 0 0 4 25 57 345 345 DISTALL ALL (P) 0.00 0.00 1.16 7.25 16.52 345 DISTALL ALL (RMS) 0.00 0.00 2.66 3.93 6.24 DISTALL END of the results output