####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 352), selected 40 , name T0543TS408_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS408_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.34 2.34 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 66 - 93 2.00 2.49 LCS_AVERAGE: 59.12 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 73 - 93 0.89 2.56 LCS_AVERAGE: 35.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 9 11 40 0 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 9 11 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 9 11 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 9 11 40 4 17 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 9 11 40 5 9 22 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 9 11 40 5 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 9 11 40 6 18 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 9 11 40 3 4 14 28 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 9 11 40 5 14 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 4 11 40 3 4 4 8 32 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 4 28 40 3 4 4 6 14 29 35 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 4 28 40 3 4 6 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 4 28 40 3 4 27 28 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 3 28 40 0 9 13 23 27 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 5 28 40 3 4 6 7 9 17 24 35 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 5 28 40 3 8 18 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 5 28 40 3 4 13 25 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 21 28 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 21 28 40 3 12 25 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 21 28 40 4 18 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 21 28 40 4 18 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 21 28 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 21 28 40 3 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 21 28 40 5 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 21 28 40 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 21 28 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 21 28 40 5 16 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 21 28 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 21 28 40 6 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 4 27 40 3 4 5 11 29 32 36 37 38 39 39 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 3 25 40 0 3 3 4 6 6 18 34 36 39 39 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 64.77 ( 35.19 59.12 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 27 29 33 35 36 37 38 39 39 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 25.00 47.50 67.50 72.50 82.50 87.50 90.00 92.50 95.00 97.50 97.50 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.38 0.68 0.89 1.07 1.35 1.51 1.60 1.73 1.86 2.13 2.11 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 GDT RMS_ALL_AT 2.75 2.58 2.51 2.49 2.41 2.40 2.40 2.38 2.39 2.36 2.37 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 2.34 # Checking swapping # possible swapping detected: E 64 E 64 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 1.385 0 0.203 0.203 2.171 77.262 77.262 LGA S 57 S 57 0.879 0 0.064 0.057 1.049 90.476 88.968 LGA C 58 C 58 1.233 0 0.146 0.773 1.787 81.429 80.000 LGA K 59 K 59 1.350 0 0.121 0.253 1.946 81.429 78.571 LGA G 60 G 60 2.323 0 0.121 0.121 2.323 66.786 66.786 LGA R 61 R 61 0.367 0 0.057 0.659 2.066 90.595 86.580 LGA C 62 C 62 1.498 0 0.615 0.619 3.222 77.619 70.873 LGA F 63 F 63 2.240 0 0.365 1.473 10.112 72.976 36.364 LGA E 64 E 64 1.378 0 0.603 0.886 5.065 75.119 55.503 LGA L 65 L 65 3.184 0 0.589 0.509 5.366 44.167 46.250 LGA Q 66 Q 66 4.649 0 0.307 0.925 12.185 47.619 22.963 LGA E 67 E 67 2.360 0 0.272 1.264 8.669 63.095 35.767 LGA V 68 V 68 2.192 0 0.565 0.605 6.772 73.095 49.864 LGA G 69 G 69 3.609 0 0.393 0.393 3.836 48.690 48.690 LGA P 70 P 70 6.581 0 0.078 0.207 10.437 20.833 12.789 LGA P 71 P 71 2.998 0 0.253 0.345 3.871 59.524 54.490 LGA D 72 D 72 2.641 3 0.637 0.630 3.970 55.595 33.214 LGA C 73 C 73 0.950 0 0.091 0.313 2.614 85.952 80.397 LGA R 74 R 74 1.007 0 0.126 0.569 3.575 83.690 75.801 LGA C 75 C 75 0.403 0 0.084 0.125 1.229 92.976 90.635 LGA D 76 D 76 1.141 0 0.040 1.148 5.436 83.690 66.726 LGA N 77 N 77 2.421 0 0.163 0.638 3.675 66.786 57.560 LGA L 78 L 78 1.410 0 0.187 0.991 2.369 77.143 77.262 LGA C 79 C 79 1.019 0 0.080 0.152 1.411 85.952 84.444 LGA K 80 K 80 1.105 0 0.117 0.813 2.234 81.429 77.672 LGA S 81 S 81 0.970 0 0.106 0.733 2.207 88.214 83.175 LGA Y 82 Y 82 0.591 0 0.101 0.701 2.955 92.857 80.000 LGA S 83 S 83 0.841 0 0.314 0.306 2.147 81.786 81.667 LGA S 84 S 84 0.787 0 0.067 0.110 0.828 90.476 90.476 LGA C 85 C 85 0.258 0 0.066 0.153 1.008 95.238 92.143 LGA C 86 C 86 0.939 0 0.200 0.290 2.291 88.214 81.746 LGA H 87 H 87 1.043 0 0.081 0.268 2.419 81.548 78.190 LGA D 88 D 88 1.010 0 0.067 1.166 5.264 85.952 68.929 LGA F 89 F 89 0.613 0 0.132 0.201 1.198 90.476 89.697 LGA D 90 D 90 0.389 0 0.081 0.879 2.323 88.571 85.179 LGA E 91 E 91 1.291 0 0.109 0.753 2.061 81.548 74.921 LGA L 92 L 92 1.178 0 0.177 0.348 2.534 83.690 76.310 LGA C 93 C 93 1.104 0 0.673 0.576 1.509 81.548 81.508 LGA L 94 L 94 4.113 0 0.675 0.725 9.215 30.833 22.083 LGA K 95 K 95 7.119 0 0.082 0.308 14.515 14.048 7.672 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.344 2.294 3.493 73.973 66.228 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 37 1.73 78.125 77.950 2.019 LGA_LOCAL RMSD: 1.733 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.381 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.344 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.800838 * X + 0.583885 * Y + 0.133178 * Z + 8.648294 Y_new = -0.192219 * X + 0.039991 * Y + 0.980537 * Z + 67.717964 Z_new = 0.567195 * X + -0.810851 * Y + 0.144260 * Z + 21.432034 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.235566 -0.603096 -1.394727 [DEG: -13.4969 -34.5549 -79.9120 ] ZXZ: 3.006597 1.426031 2.531198 [DEG: 172.2653 81.7056 145.0269 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS408_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS408_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 37 1.73 77.950 2.34 REMARK ---------------------------------------------------------- MOLECULE T0543TS408_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 487 H GLY 56 35.290 72.851 20.171 1.00 57.96 H ATOM 486 N GLY 56 34.951 72.415 19.419 1.00 53.26 N ATOM 485 CA GLY 56 33.724 71.703 19.563 1.00 73.19 C ATOM 488 C GLY 56 32.746 72.776 19.470 1.00 48.47 C ATOM 489 O GLY 56 31.771 73.006 20.208 1.00 51.53 O ATOM 492 H SER 57 33.854 73.660 18.133 1.00 43.57 H ATOM 491 N SER 57 33.042 73.624 18.595 1.00 44.09 N ATOM 490 CA SER 57 32.011 74.547 18.443 1.00 42.69 C ATOM 493 CB SER 57 32.353 75.659 17.465 1.00 42.93 C ATOM 494 C SER 57 30.835 73.748 17.861 1.00 42.23 C ATOM 495 O SER 57 30.902 72.953 16.912 1.00 42.21 O ATOM 496 OG SER 57 31.312 76.621 17.330 1.00 42.43 O ATOM 499 H CYS 58 29.544 74.570 19.048 1.00 43.74 H ATOM 498 N CYS 58 29.644 73.985 18.331 1.00 41.77 N ATOM 497 CA CYS 58 28.429 73.358 17.762 1.00 50.88 C ATOM 500 CB CYS 58 27.351 73.419 18.816 1.00 40.74 C ATOM 501 C CYS 58 28.137 74.118 16.592 1.00 40.46 C ATOM 502 O CYS 58 27.076 73.988 16.199 1.00 40.18 O ATOM 503 SG CYS 58 25.775 72.904 18.438 1.00 39.25 S ATOM 506 H LYS 59 29.907 74.971 16.205 1.00 44.96 H ATOM 505 N LYS 59 28.975 74.982 15.976 1.00 43.20 N ATOM 504 CA LYS 59 28.491 75.857 14.894 1.00 42.79 C ATOM 507 CB LYS 59 29.561 76.627 14.199 1.00 45.10 C ATOM 508 C LYS 59 27.765 75.151 13.788 1.00 40.94 C ATOM 509 O LYS 59 28.386 74.478 12.986 1.00 42.18 O ATOM 510 CG LYS 59 28.971 77.623 13.231 1.00 46.39 C ATOM 511 CD LYS 59 30.081 78.433 12.589 1.00 51.15 C ATOM 512 CE LYS 59 29.520 79.404 11.561 1.00 52.34 C ATOM 513 NZ LYS 59 30.598 80.218 10.927 1.00 56.63 N ATOM 516 H GLY 60 26.019 75.673 14.523 1.00 42.04 H ATOM 515 N GLY 60 26.440 75.235 13.814 1.00 40.63 N ATOM 514 CA GLY 60 25.627 74.742 12.737 1.00 46.78 C ATOM 517 C GLY 60 25.444 73.248 12.871 1.00 41.38 C ATOM 518 O GLY 60 24.614 72.667 12.192 1.00 44.17 O ATOM 521 H ARG 61 26.761 73.070 14.358 1.00 41.37 H ATOM 520 N ARG 61 26.127 72.600 13.824 1.00 41.26 N ATOM 519 CA ARG 61 25.909 71.175 14.051 1.00 42.54 C ATOM 522 CB ARG 61 27.084 70.343 14.648 1.00 44.66 C ATOM 523 C ARG 61 24.921 70.913 15.140 1.00 42.22 C ATOM 524 O ARG 61 24.876 69.748 15.605 1.00 41.26 O ATOM 525 CG ARG 61 28.613 70.539 14.648 1.00 42.51 C ATOM 526 CD ARG 61 29.071 69.325 15.483 1.00 48.01 C ATOM 527 NE ARG 61 30.288 69.363 16.371 1.00 44.33 N ATOM 528 HE ARG 61 31.046 69.868 16.098 1.00 41.53 H ATOM 529 CZ ARG 61 30.333 68.687 17.556 1.00 45.92 C ATOM 530 NH1 ARG 61 29.285 67.984 17.941 1.00 51.21 H ATOM 531 NH2 ARG 61 31.379 68.765 18.380 1.00 45.45 H ATOM 534 H CYS 62 24.247 72.790 15.072 1.00 42.31 H ATOM 533 N CYS 62 24.198 71.967 15.505 1.00 40.76 N ATOM 532 CA CYS 62 23.395 71.769 16.599 1.00 53.09 C ATOM 535 CB CYS 62 23.061 73.014 17.349 1.00 40.15 C ATOM 536 C CYS 62 22.245 70.787 16.171 1.00 41.32 C ATOM 537 O CYS 62 21.947 69.924 16.998 1.00 40.76 O ATOM 538 SG CYS 62 24.488 73.739 18.179 1.00 39.38 S ATOM 541 H PHE 63 21.811 71.592 14.387 1.00 44.61 H ATOM 540 N PHE 63 21.649 70.883 14.993 1.00 43.90 N ATOM 539 CA PHE 63 20.666 69.800 14.702 1.00 43.22 C ATOM 542 CB PHE 63 19.812 69.553 13.465 1.00 43.66 C ATOM 543 C PHE 63 21.338 68.520 14.678 1.00 44.26 C ATOM 544 O PHE 63 20.765 67.651 15.266 1.00 44.36 O ATOM 545 CG PHE 63 19.107 68.215 13.406 1.00 43.10 C ATOM 546 CD1 PHE 63 18.078 67.908 14.275 1.00 43.32 C ATOM 547 CE1 PHE 63 17.460 66.659 14.227 1.00 44.10 C ATOM 548 CZ PHE 63 17.941 65.697 13.412 1.00 44.99 C ATOM 549 CD2 PHE 63 19.505 67.268 12.517 1.00 43.36 C ATOM 550 CE2 PHE 63 18.909 66.010 12.498 1.00 43.66 C ATOM 553 H GLU 64 22.975 69.251 13.757 1.00 48.17 H ATOM 552 N GLU 64 22.539 68.468 14.060 1.00 46.59 N ATOM 551 CA GLU 64 23.152 67.140 13.916 1.00 47.44 C ATOM 554 CB GLU 64 24.636 67.060 13.570 1.00 48.86 C ATOM 555 C GLU 64 22.869 66.407 15.168 1.00 50.51 C ATOM 556 O GLU 64 22.471 65.294 14.939 1.00 49.16 O ATOM 557 CG GLU 64 24.894 67.844 12.265 1.00 50.74 C ATOM 558 CD GLU 64 26.373 67.777 11.790 1.00 52.77 C ATOM 559 OE1 GLU 64 27.231 67.478 12.647 1.00 54.34 O ATOM 560 OE2 GLU 64 26.728 67.926 10.575 1.00 53.88 O ATOM 563 H LEU 65 23.896 67.315 16.618 1.00 43.76 H ATOM 562 N LEU 65 23.184 66.715 16.401 1.00 49.65 N ATOM 561 CA LEU 65 22.488 65.931 17.374 1.00 52.11 C ATOM 564 CB LEU 65 21.689 64.807 16.668 1.00 53.33 C ATOM 565 C LEU 65 23.402 65.655 18.518 1.00 51.85 C ATOM 566 O LEU 65 24.365 66.453 18.824 1.00 46.31 O ATOM 567 CG LEU 65 20.201 64.991 16.438 1.00 51.48 C ATOM 568 CD1 LEU 65 19.632 63.750 15.796 1.00 53.18 C ATOM 569 CD2 LEU 65 19.521 65.505 17.647 1.00 47.08 C ATOM 572 H GLN 66 22.158 64.188 19.039 1.00 56.01 H ATOM 571 N GLN 66 22.988 64.584 19.199 1.00 55.03 N ATOM 570 CA GLN 66 23.891 64.106 20.225 1.00 53.83 C ATOM 573 CB GLN 66 23.262 63.216 21.324 1.00 62.14 C ATOM 574 C GLN 66 24.962 63.198 19.589 1.00 52.09 C ATOM 575 O GLN 66 24.975 61.962 19.599 1.00 49.97 O ATOM 576 CG GLN 66 22.578 63.868 22.528 1.00 64.07 C ATOM 577 CD GLN 66 22.166 62.918 23.617 1.00 62.74 C ATOM 578 NE2 GLN 66 22.656 63.024 24.843 1.00 58.45 N ATOM 579 HE21 GLN 66 23.274 63.712 25.023 1.00 57.62 H ATOM 580 HE22 GLN 66 22.381 62.415 25.508 1.00 55.61 H ATOM 581 OE1 GLN 66 21.426 62.017 23.363 1.00 67.36 O ATOM 584 H GLU 67 25.640 64.861 19.020 1.00 63.45 H ATOM 583 N GLU 67 25.901 63.972 19.112 1.00 55.27 N ATOM 582 CA GLU 67 27.181 63.515 18.612 1.00 52.04 C ATOM 585 CB GLU 67 27.708 64.520 17.569 1.00 48.90 C ATOM 586 C GLU 67 28.165 63.365 19.807 1.00 54.09 C ATOM 587 O GLU 67 29.214 63.954 19.928 1.00 49.23 O ATOM 588 CG GLU 67 26.895 64.681 16.283 1.00 47.13 C ATOM 589 CD GLU 67 26.940 63.437 15.355 1.00 45.62 C ATOM 590 OE1 GLU 67 27.474 62.393 15.795 1.00 47.59 O ATOM 591 OE2 GLU 67 26.546 63.491 14.174 1.00 44.57 O ATOM 594 H VAL 68 27.015 61.986 20.518 1.00 72.81 H ATOM 593 N VAL 68 27.827 62.431 20.649 1.00 65.58 N ATOM 592 CA VAL 68 28.605 62.131 21.808 1.00 73.62 C ATOM 595 CB VAL 68 27.866 60.848 22.188 1.00 90.29 C ATOM 596 C VAL 68 30.073 61.949 21.400 1.00 68.85 C ATOM 597 O VAL 68 30.939 62.524 22.076 1.00 69.29 O ATOM 598 CG1 VAL 68 28.498 60.022 23.266 1.00 92.46 C ATOM 599 CG2 VAL 68 26.457 61.288 22.578 1.00 91.47 C ATOM 602 H GLY 69 29.596 60.945 19.796 1.00 69.09 H ATOM 601 N GLY 69 30.320 61.248 20.300 1.00 70.27 N ATOM 600 CA GLY 69 31.667 60.913 19.840 1.00 73.93 C ATOM 603 C GLY 69 32.727 62.008 20.095 1.00 65.36 C ATOM 604 O GLY 69 33.656 61.914 20.931 1.00 72.76 O ATOM 606 N PRO 70 32.786 63.084 19.306 1.00 54.93 N ATOM 605 CA PRO 70 33.806 64.022 19.696 1.00 54.08 C ATOM 607 CB PRO 70 33.460 65.185 18.824 1.00 49.31 C ATOM 608 C PRO 70 33.547 64.535 21.101 1.00 50.60 C ATOM 609 O PRO 70 32.468 65.015 21.350 1.00 48.26 O ATOM 610 CG PRO 70 32.648 64.771 17.692 1.00 48.45 C ATOM 611 CD PRO 70 31.934 63.540 18.189 1.00 48.70 C ATOM 613 N PRO 71 34.388 64.657 22.048 1.00 53.48 N ATOM 612 CA PRO 71 33.919 65.186 23.358 1.00 55.10 C ATOM 614 CB PRO 71 35.118 64.814 24.198 1.00 57.90 C ATOM 615 C PRO 71 33.591 66.715 23.525 1.00 54.89 C ATOM 616 O PRO 71 32.818 67.200 24.358 1.00 59.08 O ATOM 617 CG PRO 71 36.270 64.971 23.228 1.00 57.30 C ATOM 618 CD PRO 71 35.779 64.452 21.893 1.00 56.27 C ATOM 621 H ASP 72 34.424 67.171 21.784 1.00 50.37 H ATOM 620 N ASP 72 34.060 67.527 22.577 1.00 52.14 N ATOM 619 CA ASP 72 34.026 68.989 22.771 1.00 51.49 C ATOM 622 CB ASP 72 34.684 69.660 21.550 1.00 49.33 C ATOM 623 C ASP 72 32.643 69.566 23.109 1.00 50.44 C ATOM 624 O ASP 72 32.433 70.426 24.007 1.00 51.87 O ATOM 625 CG ASP 72 36.157 69.594 21.163 1.00 49.27 C ATOM 626 OD1 ASP 72 37.022 69.447 22.041 1.00 50.40 O ATOM 627 OD2 ASP 72 36.433 69.734 19.932 1.00 48.21 O ATOM 630 H CYS 73 31.816 68.422 21.741 1.00 49.40 H ATOM 629 N CYS 73 31.646 69.029 22.426 1.00 49.91 N ATOM 628 CA CYS 73 30.351 69.362 22.729 1.00 50.23 C ATOM 631 CB CYS 73 30.616 70.655 22.066 1.00 49.44 C ATOM 632 C CYS 73 29.287 68.594 22.005 1.00 49.13 C ATOM 633 O CYS 73 29.441 68.198 20.837 1.00 50.47 O ATOM 634 SG CYS 73 29.747 70.786 20.513 1.00 51.78 S ATOM 637 H ARG 74 28.180 68.899 23.659 1.00 49.67 H ATOM 636 N ARG 74 28.160 68.499 22.795 1.00 50.82 N ATOM 635 CA ARG 74 26.956 67.845 22.374 1.00 50.52 C ATOM 638 CB ARG 74 26.542 66.769 23.427 1.00 51.10 C ATOM 639 C ARG 74 26.123 69.100 22.037 1.00 47.90 C ATOM 640 O ARG 74 26.081 70.050 22.827 1.00 46.50 O ATOM 641 CG ARG 74 27.589 65.675 23.776 1.00 52.60 C ATOM 642 CD ARG 74 27.409 64.851 25.083 1.00 57.63 C ATOM 643 NE ARG 74 26.362 63.898 25.342 1.00 68.22 N ATOM 644 HE ARG 74 25.912 63.480 24.618 1.00 70.77 H ATOM 645 CZ ARG 74 26.008 63.618 26.595 1.00 77.07 C ATOM 646 NH1 ARG 74 26.570 64.377 27.546 1.00 83.43 H ATOM 647 NH2 ARG 74 25.224 62.607 26.953 1.00 79.33 H ATOM 650 H CYS 75 25.777 68.453 20.228 1.00 48.33 H ATOM 649 N CYS 75 25.638 69.175 20.798 1.00 45.21 N ATOM 648 CA CYS 75 24.924 70.254 20.294 1.00 44.42 C ATOM 651 CB CYS 75 25.262 70.145 18.834 1.00 39.74 C ATOM 652 C CYS 75 23.471 70.081 20.483 1.00 44.37 C ATOM 653 O CYS 75 22.761 70.916 19.893 1.00 45.94 O ATOM 654 SG CYS 75 26.990 70.533 18.504 1.00 39.15 S ATOM 657 H ASP 76 23.686 68.466 21.654 1.00 48.45 H ATOM 656 N ASP 76 23.060 68.987 21.180 1.00 48.88 N ATOM 655 CA ASP 76 21.621 68.644 21.258 1.00 51.06 C ATOM 658 CB ASP 76 21.176 67.227 21.693 1.00 57.45 C ATOM 659 C ASP 76 20.824 69.639 22.119 1.00 53.35 C ATOM 660 O ASP 76 21.291 70.592 22.735 1.00 55.02 O ATOM 661 CG ASP 76 19.700 66.942 21.390 1.00 64.59 C ATOM 662 OD1 ASP 76 19.146 67.114 20.270 1.00 71.10 O ATOM 663 OD2 ASP 76 18.982 66.596 22.371 1.00 67.75 O ATOM 666 H ASN 77 19.107 68.753 21.746 1.00 56.10 H ATOM 665 N ASN 77 19.530 69.490 22.149 1.00 56.42 N ATOM 664 CA ASN 77 18.777 70.536 22.808 1.00 59.59 C ATOM 667 CB ASN 77 17.488 70.372 22.036 1.00 62.82 C ATOM 668 C ASN 77 18.552 70.219 24.296 1.00 63.97 C ATOM 669 O ASN 77 18.033 70.904 25.164 1.00 68.27 O ATOM 670 CG ASN 77 17.783 70.506 20.555 1.00 60.74 C ATOM 671 ND2 ASN 77 17.364 69.492 19.807 1.00 59.47 N ATOM 672 HD21 ASN 77 16.931 68.769 20.228 1.00 58.02 H ATOM 673 HD22 ASN 77 17.520 69.506 18.877 1.00 61.87 H ATOM 674 OD1 ASN 77 18.359 71.491 20.096 1.00 60.40 O ATOM 677 H LEU 78 19.649 68.713 23.898 1.00 59.80 H ATOM 676 N LEU 78 19.154 69.120 24.597 1.00 64.28 N ATOM 675 CA LEU 78 19.206 68.476 25.854 1.00 65.71 C ATOM 678 CB LEU 78 19.391 66.981 25.661 1.00 66.98 C ATOM 679 C LEU 78 20.424 68.927 26.536 1.00 64.40 C ATOM 680 O LEU 78 20.386 68.880 27.741 1.00 69.55 O ATOM 681 CG LEU 78 18.355 66.143 26.309 1.00 61.75 C ATOM 682 CD1 LEU 78 18.513 64.794 25.611 1.00 68.11 C ATOM 683 CD2 LEU 78 18.652 66.101 27.793 1.00 49.82 C ATOM 686 H CYS 79 21.270 69.282 24.848 1.00 57.90 H ATOM 685 N CYS 79 21.434 69.297 25.780 1.00 59.56 N ATOM 684 CA CYS 79 22.750 69.578 26.247 1.00 56.11 C ATOM 687 CB CYS 79 23.626 70.281 25.130 1.00 51.38 C ATOM 688 C CYS 79 22.660 70.410 27.494 1.00 58.86 C ATOM 689 O CYS 79 23.408 70.084 28.361 1.00 58.96 O ATOM 690 SG CYS 79 23.465 72.045 25.113 1.00 47.12 S ATOM 693 H LYS 80 21.042 71.524 27.272 1.00 60.26 H ATOM 692 N LYS 80 21.798 71.359 27.823 1.00 59.93 N ATOM 691 CA LYS 80 22.010 72.193 29.044 1.00 62.48 C ATOM 694 CB LYS 80 21.150 73.455 29.101 1.00 59.54 C ATOM 695 C LYS 80 21.973 71.296 30.345 1.00 62.30 C ATOM 696 O LYS 80 22.537 71.474 31.461 1.00 63.66 O ATOM 697 CG LYS 80 21.458 74.553 28.069 1.00 55.81 C ATOM 698 CD LYS 80 20.218 75.439 28.215 1.00 58.83 C ATOM 699 CE LYS 80 20.167 76.674 27.351 1.00 56.69 C ATOM 700 NZ LYS 80 21.034 77.702 27.973 1.00 55.37 N ATOM 703 H SER 81 20.710 70.165 29.320 1.00 66.24 H ATOM 702 N SER 81 21.097 70.317 30.157 1.00 66.77 N ATOM 701 CA SER 81 20.770 69.476 31.262 1.00 74.15 C ATOM 704 CB SER 81 19.790 68.394 30.844 1.00 77.00 C ATOM 705 C SER 81 21.963 68.731 31.723 1.00 73.54 C ATOM 706 O SER 81 21.989 68.289 32.861 1.00 82.91 O ATOM 707 OG SER 81 20.399 67.413 30.066 1.00 70.78 O ATOM 710 H TYR 82 22.791 68.947 29.957 1.00 64.13 H ATOM 709 N TYR 82 22.925 68.626 30.835 1.00 67.30 N ATOM 708 CA TYR 82 24.194 68.033 31.187 1.00 66.88 C ATOM 711 CB TYR 82 24.613 66.992 30.169 1.00 62.06 C ATOM 712 C TYR 82 25.332 69.015 30.950 1.00 66.04 C ATOM 713 O TYR 82 26.484 68.704 30.968 1.00 69.07 O ATOM 714 CG TYR 82 23.579 66.136 29.510 1.00 67.22 C ATOM 715 CD1 TYR 82 23.363 66.398 28.163 1.00 57.83 C ATOM 716 CE1 TYR 82 22.527 65.615 27.430 1.00 62.67 C ATOM 717 CZ TYR 82 21.795 64.635 28.047 1.00 78.36 C ATOM 718 CD2 TYR 82 22.780 65.172 30.136 1.00 90.25 C ATOM 719 CE2 TYR 82 21.924 64.395 29.400 1.00 90.61 C ATOM 720 OH TYR 82 21.092 63.804 27.298 1.00 84.05 H ATOM 723 H SER 83 24.177 70.563 30.807 1.00 63.88 H ATOM 722 N SER 83 25.071 70.237 30.641 1.00 63.66 N ATOM 721 CA SER 83 26.073 71.207 30.202 1.00 61.05 C ATOM 724 CB SER 83 26.888 71.563 31.439 1.00 62.96 C ATOM 725 C SER 83 27.119 70.751 29.139 1.00 60.20 C ATOM 726 O SER 83 28.114 71.346 28.862 1.00 62.56 O ATOM 727 OG SER 83 25.962 71.881 32.451 1.00 66.10 O ATOM 730 H SER 84 26.101 69.245 28.470 1.00 59.02 H ATOM 729 N SER 84 26.907 69.712 28.390 1.00 58.26 N ATOM 728 CA SER 84 27.849 69.260 27.444 1.00 54.76 C ATOM 731 CB SER 84 27.641 67.845 27.181 1.00 54.10 C ATOM 732 C SER 84 27.897 70.061 26.172 1.00 52.40 C ATOM 733 O SER 84 28.642 69.793 25.270 1.00 52.27 O ATOM 734 OG SER 84 26.381 67.457 26.685 1.00 53.43 O ATOM 737 H CYS 85 26.436 71.102 26.774 1.00 56.14 H ATOM 736 N CYS 85 27.039 70.994 26.073 1.00 51.33 N ATOM 735 CA CYS 85 26.904 71.864 24.991 1.00 48.64 C ATOM 738 CB CYS 85 26.143 73.146 25.485 1.00 45.59 C ATOM 739 C CYS 85 28.196 72.364 24.623 1.00 47.16 C ATOM 740 O CYS 85 29.150 72.564 25.434 1.00 47.88 O ATOM 741 SG CYS 85 24.654 72.742 26.384 1.00 45.08 S ATOM 744 H CYS 86 27.325 72.392 22.856 1.00 48.61 H ATOM 743 N CYS 86 28.097 72.634 23.317 1.00 47.20 N ATOM 742 CA CYS 86 29.144 73.284 22.610 1.00 48.55 C ATOM 745 CB CYS 86 28.404 73.168 21.342 1.00 49.77 C ATOM 746 C CYS 86 29.485 74.613 23.267 1.00 45.61 C ATOM 747 O CYS 86 28.460 74.727 23.925 1.00 43.91 O ATOM 748 SG CYS 86 28.039 71.458 20.819 1.00 51.84 S ATOM 751 H HIS 87 31.328 75.439 22.956 1.00 46.15 H ATOM 750 N HIS 87 30.516 75.482 23.438 1.00 46.06 N ATOM 749 CA HIS 87 30.197 76.528 24.418 1.00 51.35 C ATOM 752 CB HIS 87 31.534 77.152 24.700 1.00 46.32 C ATOM 753 C HIS 87 29.149 77.578 24.030 1.00 42.47 C ATOM 754 O HIS 87 28.168 77.900 24.776 1.00 42.62 O ATOM 755 CG HIS 87 32.188 78.069 23.688 1.00 43.22 C ATOM 756 ND1 HIS 87 32.637 77.728 22.426 1.00 42.11 N ATOM 757 HD1 HIS 87 32.612 76.858 22.042 1.00 44.45 H ATOM 758 CE1 HIS 87 33.272 78.767 21.897 1.00 40.58 C ATOM 759 NE2 HIS 87 33.065 79.813 22.674 1.00 41.77 N ATOM 760 HE2 HIS 87 33.382 80.692 22.498 1.00 43.70 H ATOM 761 CD2 HIS 87 32.417 79.396 23.820 1.00 43.74 C ATOM 764 H ASP 88 30.039 77.566 22.275 1.00 41.27 H ATOM 763 N ASP 88 29.358 77.990 22.770 1.00 41.21 N ATOM 762 CA ASP 88 28.592 79.056 22.107 1.00 43.36 C ATOM 765 CB ASP 88 29.303 79.572 20.857 1.00 41.83 C ATOM 766 C ASP 88 27.336 78.448 21.631 1.00 41.18 C ATOM 767 O ASP 88 26.581 79.012 20.864 1.00 42.24 O ATOM 768 CG ASP 88 30.435 80.507 21.108 1.00 42.71 C ATOM 769 OD1 ASP 88 30.459 81.211 22.138 1.00 42.90 O ATOM 770 OD2 ASP 88 31.375 80.470 20.301 1.00 43.35 O ATOM 773 H PHE 89 27.833 76.906 22.677 1.00 41.30 H ATOM 772 N PHE 89 27.111 77.299 22.182 1.00 40.52 N ATOM 771 CA PHE 89 25.922 76.596 21.920 1.00 41.62 C ATOM 774 CB PHE 89 25.645 75.660 23.075 1.00 42.39 C ATOM 775 C PHE 89 24.755 77.477 22.057 1.00 42.06 C ATOM 776 O PHE 89 23.958 77.290 21.184 1.00 42.57 O ATOM 777 CG PHE 89 24.392 74.867 22.811 1.00 43.93 C ATOM 778 CD1 PHE 89 24.446 73.763 22.078 1.00 44.35 C ATOM 779 CE1 PHE 89 23.340 72.992 21.875 1.00 45.37 C ATOM 780 CZ PHE 89 22.121 73.397 22.335 1.00 47.05 C ATOM 781 CD2 PHE 89 23.213 75.185 23.415 1.00 45.31 C ATOM 782 CE2 PHE 89 22.055 74.486 23.130 1.00 47.15 C ATOM 785 H ASP 90 25.290 78.532 23.670 1.00 42.86 H ATOM 784 N ASP 90 24.607 78.336 23.051 1.00 43.04 N ATOM 783 CA ASP 90 23.313 78.902 23.134 1.00 52.51 C ATOM 786 CB ASP 90 23.288 79.784 24.419 1.00 44.17 C ATOM 787 C ASP 90 22.924 79.525 21.821 1.00 43.99 C ATOM 788 O ASP 90 21.902 79.207 21.262 1.00 44.85 O ATOM 789 CG ASP 90 23.125 78.907 25.630 1.00 44.65 C ATOM 790 OD1 ASP 90 22.658 77.796 25.385 1.00 46.29 O ATOM 791 OD2 ASP 90 23.444 79.233 26.790 1.00 43.81 O ATOM 794 H GLU 91 24.368 80.842 22.084 1.00 42.84 H ATOM 793 N GLU 91 23.722 80.513 21.441 1.00 43.85 N ATOM 792 CA GLU 91 23.511 81.259 20.193 1.00 44.88 C ATOM 795 CB GLU 91 24.627 82.273 19.954 1.00 44.85 C ATOM 796 C GLU 91 23.530 80.362 19.028 1.00 45.36 C ATOM 797 O GLU 91 22.723 80.430 18.221 1.00 47.41 O ATOM 798 CG GLU 91 24.556 83.391 20.987 1.00 45.97 C ATOM 799 CD GLU 91 25.587 84.505 20.855 1.00 45.38 C ATOM 800 OE1 GLU 91 26.517 84.402 20.025 1.00 44.39 O ATOM 801 OE2 GLU 91 25.473 85.498 21.609 1.00 45.31 O ATOM 804 H LEU 92 25.049 79.272 19.723 1.00 42.99 H ATOM 803 N LEU 92 24.423 79.425 19.003 1.00 43.51 N ATOM 802 CA LEU 92 24.443 78.720 17.752 1.00 44.05 C ATOM 805 CB LEU 92 25.581 77.744 17.782 1.00 43.02 C ATOM 806 C LEU 92 23.193 77.938 17.631 1.00 44.07 C ATOM 807 O LEU 92 22.548 77.963 16.567 1.00 45.27 O ATOM 808 CG LEU 92 26.893 78.540 17.812 1.00 43.45 C ATOM 809 CD1 LEU 92 28.133 77.741 18.053 1.00 43.06 C ATOM 810 CD2 LEU 92 27.077 79.222 16.485 1.00 45.18 C ATOM 813 H CYS 93 23.311 77.453 19.565 1.00 44.21 H ATOM 812 N CYS 93 22.822 77.342 18.753 1.00 43.14 N ATOM 811 CA CYS 93 21.728 76.479 18.584 1.00 43.23 C ATOM 814 CB CYS 93 21.609 75.495 19.635 1.00 43.21 C ATOM 815 C CYS 93 20.510 77.328 18.186 1.00 44.79 C ATOM 816 O CYS 93 20.201 78.160 19.043 1.00 46.27 O ATOM 817 SG CYS 93 22.864 74.410 18.939 1.00 44.66 S ATOM 820 H LEU 94 20.110 76.394 16.419 1.00 44.50 H ATOM 819 N LEU 94 19.884 77.125 16.976 1.00 46.32 N ATOM 818 CA LEU 94 18.832 78.062 16.604 1.00 46.59 C ATOM 821 CB LEU 94 19.220 79.238 15.695 1.00 46.73 C ATOM 822 C LEU 94 17.702 77.168 16.344 1.00 47.01 C ATOM 823 O LEU 94 18.055 76.043 16.340 1.00 47.82 O ATOM 824 CG LEU 94 20.074 80.261 16.495 1.00 47.42 C ATOM 825 CD1 LEU 94 20.849 81.292 15.701 1.00 49.09 C ATOM 826 CD2 LEU 94 19.264 80.987 17.564 1.00 45.73 C ATOM 829 H LYS 95 16.101 78.344 16.379 1.00 47.72 H ATOM 828 N LYS 95 16.447 77.465 16.279 1.00 48.89 N ATOM 827 CA LYS 95 15.665 76.313 15.988 1.00 47.09 C ATOM 830 CB LYS 95 14.222 76.786 15.859 1.00 46.50 C ATOM 831 C LYS 95 16.117 75.724 14.653 1.00 47.20 C ATOM 832 O LYS 95 16.004 76.371 13.621 1.00 47.00 O ATOM 833 CG LYS 95 13.462 76.974 17.148 1.00 45.13 C ATOM 834 CD LYS 95 13.090 75.675 17.873 1.00 45.62 C ATOM 835 CE LYS 95 12.607 76.100 19.229 1.00 45.03 C ATOM 836 NZ LYS 95 12.444 75.006 20.224 1.00 44.52 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 57.48 62.8 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 56.87 60.7 56 100.0 56 ARMSMC BURIED . . . . . . . . 58.99 68.2 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 11.54 100.0 2 5.6 36 ARMSSC1 RELIABLE SIDE CHAINS . 11.54 100.0 2 5.7 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 11.54 100.0 2 8.0 25 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 27.61 50.0 2 8.7 23 ARMSSC2 RELIABLE SIDE CHAINS . 27.61 50.0 2 11.8 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 27.61 50.0 2 11.1 18 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.34 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.34 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0586 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.63 29 100.0 29 CRMSCA BURIED . . . . . . . . 1.32 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.49 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.78 142 100.0 142 CRMSMC BURIED . . . . . . . . 1.49 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.49 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 4.27 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.93 103 100.0 103 CRMSSC BURIED . . . . . . . . 3.08 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.51 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.87 219 100.0 219 CRMSALL BURIED . . . . . . . . 2.33 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 51.083 0.933 0.936 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 51.937 0.925 0.929 29 100.0 29 ERRCA BURIED . . . . . . . . 48.833 0.952 0.954 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 49.606 0.928 0.932 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 50.212 0.920 0.925 142 100.0 142 ERRMC BURIED . . . . . . . . 48.043 0.948 0.949 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 49.491 0.881 0.892 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 49.313 0.886 0.896 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 48.341 0.867 0.880 103 100.0 103 ERRSC BURIED . . . . . . . . 52.451 0.917 0.921 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 49.613 0.908 0.914 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 49.455 0.898 0.906 219 100.0 219 ERRALL BURIED . . . . . . . . 50.025 0.934 0.937 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 12 27 34 38 40 40 40 DISTCA CA (P) 30.00 67.50 85.00 95.00 100.00 40 DISTCA CA (RMS) 0.73 1.15 1.51 1.91 2.34 DISTCA ALL (N) 59 178 223 262 296 303 303 DISTALL ALL (P) 19.47 58.75 73.60 86.47 97.69 303 DISTALL ALL (RMS) 0.75 1.24 1.54 2.04 3.06 DISTALL END of the results output