####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS403_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS403_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 97 - 118 4.84 8.25 LCS_AVERAGE: 41.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 99 - 108 1.90 8.80 LCS_AVERAGE: 14.32 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 103 - 108 0.80 12.97 LCS_AVERAGE: 9.78 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 5 21 3 3 3 4 5 5 5 5 5 5 10 11 12 14 19 24 31 34 36 37 LCS_GDT A 97 A 97 3 5 22 3 3 4 4 5 5 5 9 12 14 19 24 26 31 32 33 35 37 38 38 LCS_GDT R 98 R 98 3 8 22 3 3 5 6 9 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT G 99 G 99 3 10 22 3 3 6 9 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT W 100 W 100 5 10 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT E 101 E 101 5 10 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 102 C 102 5 10 22 3 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT T 103 T 103 6 10 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT K 104 K 104 6 10 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT D 105 D 105 6 10 22 4 5 6 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT R 106 R 106 6 10 22 4 5 6 9 10 12 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 107 C 107 6 10 22 4 5 6 10 10 14 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT G 108 G 108 6 10 22 3 5 6 10 13 16 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT E 109 E 109 4 7 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT V 110 V 110 4 7 22 3 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT R 111 R 111 4 7 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT N 112 N 112 4 7 22 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT E 113 E 113 4 7 22 3 4 5 6 8 14 19 20 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT E 114 E 114 4 5 22 3 4 4 4 8 8 10 16 20 21 23 25 26 29 31 32 33 37 38 38 LCS_GDT N 115 N 115 5 6 22 3 4 5 5 6 10 11 13 18 22 23 25 28 31 31 33 35 37 38 38 LCS_GDT A 116 A 116 5 6 22 3 4 5 5 6 10 13 17 20 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 117 C 117 5 6 22 3 4 5 5 7 10 13 17 20 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT H 118 H 118 5 6 22 3 5 5 6 7 7 8 9 11 13 15 16 18 23 26 30 34 37 38 38 LCS_GDT C 119 C 119 5 6 16 3 5 5 6 7 7 8 9 11 12 15 16 17 19 20 23 29 33 35 38 LCS_GDT S 120 S 120 5 6 16 3 5 5 6 7 7 8 9 11 13 15 16 18 21 24 28 32 34 38 38 LCS_GDT E 121 E 121 5 6 16 3 5 5 6 7 7 8 9 11 13 15 16 18 19 22 23 31 33 35 37 LCS_GDT D 122 D 122 5 6 16 3 5 5 6 7 7 8 10 11 13 15 17 21 25 30 33 35 37 38 38 LCS_GDT C 123 C 123 4 4 16 3 4 4 4 5 5 7 8 9 11 12 16 20 23 30 33 35 37 38 38 LCS_GDT L 124 L 124 4 4 16 3 4 4 4 5 6 7 10 11 15 20 25 30 31 32 33 35 37 38 38 LCS_GDT S 125 S 125 4 4 16 3 3 4 9 12 17 18 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT R 126 R 126 4 4 16 3 4 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT G 127 G 127 4 6 16 3 3 6 10 12 17 18 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT D 128 D 128 4 6 16 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 129 C 129 4 6 16 4 4 10 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 130 C 130 4 6 16 4 4 5 6 6 6 9 10 13 15 24 26 30 31 32 33 35 37 38 38 LCS_GDT T 131 T 131 4 6 16 4 4 5 6 6 7 9 10 11 13 15 21 24 28 32 32 35 37 37 38 LCS_GDT N 132 N 132 4 6 16 4 4 5 6 6 7 9 10 12 14 20 24 30 31 32 33 35 37 38 38 LCS_GDT Y 133 Y 133 4 4 15 3 4 4 5 6 8 8 15 21 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT Q 134 Q 134 4 4 15 3 4 5 10 13 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT V 135 V 135 4 4 15 3 4 5 8 9 10 10 12 13 15 21 25 30 31 32 33 35 37 38 38 LCS_GDT V 136 V 136 3 4 15 3 3 4 7 8 8 11 16 20 23 24 26 30 31 32 33 35 37 38 38 LCS_GDT C 137 C 137 4 4 15 3 4 4 5 5 6 10 11 14 17 20 24 26 28 30 30 33 36 38 38 LCS_GDT K 138 K 138 4 4 15 3 4 4 5 5 10 11 12 14 18 20 24 26 28 30 30 33 34 37 38 LCS_GDT G 139 G 139 4 4 15 3 4 4 5 5 5 6 7 14 16 16 17 21 24 27 30 31 34 35 38 LCS_GDT E 140 E 140 4 4 12 3 4 4 5 5 10 11 12 15 18 22 24 26 28 30 30 33 34 37 38 LCS_AVERAGE LCS_A: 21.96 ( 9.78 14.32 41.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 11 12 14 17 19 21 22 23 24 26 30 31 32 33 35 37 38 38 GDT PERCENT_AT 8.89 13.33 24.44 26.67 31.11 37.78 42.22 46.67 48.89 51.11 53.33 57.78 66.67 68.89 71.11 73.33 77.78 82.22 84.44 84.44 GDT RMS_LOCAL 0.20 0.53 1.07 1.18 1.44 2.06 2.21 2.49 2.63 2.98 3.17 3.56 4.29 4.50 4.67 4.99 5.34 5.67 5.98 5.87 GDT RMS_ALL_AT 8.15 8.75 8.28 8.20 8.21 7.94 8.39 8.09 8.14 7.97 7.89 8.08 7.99 8.05 8.15 7.93 8.00 7.97 7.72 7.85 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 14.013 0 0.044 1.160 16.216 0.000 0.000 LGA A 97 A 97 8.866 0 0.064 0.085 10.903 7.381 6.000 LGA R 98 R 98 3.650 0 0.635 0.946 7.898 55.952 39.610 LGA G 99 G 99 2.891 0 0.403 0.403 3.302 63.333 63.333 LGA W 100 W 100 1.215 0 0.390 0.283 5.393 88.214 50.306 LGA E 101 E 101 0.310 0 0.415 9.769 29.781 86.429 57.354 LGA C 102 C 102 1.450 0 0.047 0.757 2.824 79.286 75.952 LGA T 103 T 103 1.527 0 0.147 0.943 3.643 81.667 73.673 LGA K 104 K 104 1.193 0 0.187 0.965 7.843 81.548 50.317 LGA D 105 D 105 2.417 0 0.225 1.156 6.778 65.119 45.893 LGA R 106 R 106 3.980 0 0.051 1.434 14.592 42.024 20.260 LGA C 107 C 107 3.501 0 0.520 0.983 4.776 48.452 44.762 LGA G 108 G 108 3.032 0 0.099 0.099 3.032 67.500 67.500 LGA E 109 E 109 2.706 0 0.270 0.919 9.397 75.714 40.899 LGA V 110 V 110 1.765 0 14.594 11.430 33.929 45.238 47.755 LGA R 111 R 111 2.216 0 0.443 1.460 6.427 59.167 47.316 LGA N 112 N 112 2.102 0 0.608 1.327 5.418 66.786 57.440 LGA E 113 E 113 4.785 0 0.063 1.146 10.569 33.095 15.714 LGA E 114 E 114 8.521 0 0.194 1.256 15.880 6.548 2.910 LGA N 115 N 115 7.908 0 0.642 1.448 10.729 10.952 6.429 LGA A 116 A 116 6.617 0 0.046 0.055 6.921 15.238 14.857 LGA C 117 C 117 6.482 0 0.095 0.208 9.064 10.119 11.270 LGA H 118 H 118 11.695 0 0.582 1.161 14.432 0.119 0.714 LGA C 119 C 119 14.838 0 0.071 0.158 15.997 0.000 0.000 LGA S 120 S 120 13.317 0 0.043 0.662 14.600 0.000 0.238 LGA E 121 E 121 15.916 0 0.691 1.351 20.873 0.000 0.000 LGA D 122 D 122 12.967 0 0.283 1.250 14.169 0.000 0.000 LGA C 123 C 123 12.436 0 0.653 0.829 16.135 0.357 0.238 LGA L 124 L 124 9.667 0 0.610 1.419 12.567 5.119 2.560 LGA S 125 S 125 3.600 0 0.675 0.890 6.200 53.929 43.175 LGA R 126 R 126 1.700 0 0.164 1.163 12.872 73.333 32.468 LGA G 127 G 127 3.543 0 0.654 0.654 3.543 61.429 61.429 LGA D 128 D 128 1.710 0 0.378 1.393 7.006 66.071 47.083 LGA C 129 C 129 1.102 0 0.165 0.202 5.445 60.357 55.000 LGA C 130 C 130 7.834 0 0.036 0.833 11.842 15.476 10.397 LGA T 131 T 131 10.660 1 0.615 0.703 14.777 0.119 0.068 LGA N 132 N 132 9.621 0 0.711 1.490 10.714 2.143 1.131 LGA Y 133 Y 133 6.852 0 0.166 1.318 8.659 25.238 11.508 LGA Q 134 Q 134 2.362 0 0.115 0.333 5.688 44.524 45.238 LGA V 135 V 135 8.136 0 0.482 0.985 12.091 8.690 4.966 LGA V 136 V 136 6.976 0 0.611 1.427 10.084 7.857 18.027 LGA C 137 C 137 10.316 0 0.668 0.866 13.094 0.714 0.476 LGA K 138 K 138 11.882 0 0.282 0.829 14.933 0.000 0.000 LGA G 139 G 139 15.831 0 0.178 0.178 16.908 0.000 0.000 LGA E 140 E 140 12.748 0 0.284 1.014 13.667 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 344 99.71 45 SUMMARY(RMSD_GDC): 7.541 7.842 8.639 33.672 26.095 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 21 2.49 40.000 35.110 0.811 LGA_LOCAL RMSD: 2.489 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.087 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 7.541 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.186620 * X + -0.974238 * Y + -0.126621 * Z + 60.212139 Y_new = -0.707909 * X + 0.222718 * Y + -0.670270 * Z + 99.324715 Z_new = 0.681203 * X + -0.035449 * Y + -0.731236 * Z + 31.931007 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.828553 -0.749405 -3.093152 [DEG: -104.7684 -42.9377 -177.2246 ] ZXZ: -0.186711 2.390928 1.622788 [DEG: -10.6977 136.9901 92.9789 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS403_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS403_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 21 2.49 35.110 7.54 REMARK ---------------------------------------------------------- MOLECULE T0543TS403_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 1ZM8 2GX0 2OWO 2VPZ ATOM 728 N THR 96 3.928 89.131 13.099 1.00 0.00 N ATOM 729 CA THR 96 4.808 89.995 12.382 1.00 0.00 C ATOM 730 C THR 96 6.204 90.007 12.929 1.00 0.00 C ATOM 731 O THR 96 7.097 90.525 12.282 1.00 0.00 O ATOM 732 CB THR 96 4.352 91.432 12.343 1.00 0.00 C ATOM 733 CG2 THR 96 2.976 91.481 11.664 1.00 0.00 C ATOM 734 OG1 THR 96 4.276 91.992 13.646 1.00 0.00 O ATOM 735 N ALA 97 6.444 89.461 14.138 1.00 0.00 N ATOM 736 CA ALA 97 7.756 89.607 14.715 1.00 0.00 C ATOM 737 C ALA 97 8.627 88.502 14.213 1.00 0.00 C ATOM 738 O ALA 97 8.315 87.328 14.401 1.00 0.00 O ATOM 739 CB ALA 97 7.749 89.557 16.247 1.00 0.00 C ATOM 740 N ARG 98 9.752 88.860 13.556 1.00 0.00 N ATOM 741 CA ARG 98 10.517 87.861 12.862 1.00 0.00 C ATOM 742 C ARG 98 11.380 87.145 13.839 1.00 0.00 C ATOM 743 O ARG 98 11.908 87.694 14.801 1.00 0.00 O ATOM 744 CB ARG 98 11.429 88.393 11.757 1.00 0.00 C ATOM 745 CG ARG 98 12.188 87.372 10.919 1.00 0.00 C ATOM 746 CD ARG 98 12.968 88.025 9.779 1.00 0.00 C ATOM 747 NE ARG 98 13.522 86.930 8.938 1.00 0.00 N ATOM 748 CZ ARG 98 13.790 87.143 7.616 1.00 0.00 C ATOM 749 NH1 ARG 98 13.700 88.399 7.093 1.00 0.00 H ATOM 750 NH2 ARG 98 14.148 86.089 6.826 1.00 0.00 H ATOM 751 N GLY 99 11.535 85.830 13.584 1.00 0.00 N ATOM 752 CA GLY 99 11.904 84.929 14.641 1.00 0.00 C ATOM 753 C GLY 99 10.651 84.180 14.864 1.00 0.00 C ATOM 754 O GLY 99 10.598 82.956 14.724 1.00 0.00 O ATOM 755 N TRP 100 9.590 84.921 15.230 1.00 0.00 N ATOM 756 CA TRP 100 8.445 84.297 15.781 1.00 0.00 C ATOM 757 C TRP 100 7.640 83.945 14.568 1.00 0.00 C ATOM 758 O TRP 100 7.364 82.783 14.285 1.00 0.00 O ATOM 759 CB TRP 100 7.697 85.236 16.737 1.00 0.00 C ATOM 760 CG TRP 100 8.558 85.773 17.875 1.00 0.00 C ATOM 761 CD1 TRP 100 8.956 87.064 18.053 1.00 0.00 C ATOM 762 CD2 TRP 100 9.122 85.038 18.985 1.00 0.00 C ATOM 763 CE2 TRP 100 9.813 85.948 19.791 1.00 0.00 C ATOM 764 CE3 TRP 100 9.071 83.713 19.310 1.00 0.00 C ATOM 765 NE1 TRP 100 9.723 87.177 19.189 1.00 0.00 N ATOM 766 CZ2 TRP 100 10.429 85.566 20.950 1.00 0.00 C ATOM 767 CZ3 TRP 100 9.647 83.350 20.516 1.00 0.00 C ATOM 768 CH2 TRP 100 10.333 84.249 21.307 1.00 0.00 H ATOM 769 N GLU 101 7.248 84.992 13.796 1.00 0.00 N ATOM 770 CA GLU 101 6.879 84.763 12.413 1.00 0.00 C ATOM 771 C GLU 101 7.808 85.629 11.627 1.00 0.00 C ATOM 772 O GLU 101 8.949 85.234 11.402 1.00 0.00 O ATOM 773 CB GLU 101 5.428 85.011 11.981 1.00 0.00 C ATOM 774 CG GLU 101 9.382 106.343 34.292 1.00 0.00 C ATOM 775 CD GLU 101 3.870 84.789 9.975 1.00 0.00 C ATOM 776 OE1 GLU 101 3.682 85.750 9.184 1.00 0.00 O ATOM 777 OE2 GLU 101 2.968 83.993 10.349 1.00 0.00 O ATOM 778 N CYS 102 7.365 86.825 11.182 1.00 0.00 N ATOM 779 CA CYS 102 7.999 87.422 10.049 1.00 0.00 C ATOM 780 C CYS 102 7.299 88.703 9.757 1.00 0.00 C ATOM 781 O CYS 102 6.071 88.790 9.792 1.00 0.00 O ATOM 782 CB CYS 102 7.922 86.573 8.766 1.00 0.00 C ATOM 783 SG CYS 102 8.756 87.333 7.349 1.00 0.00 S ATOM 784 N THR 103 8.072 89.761 9.434 1.00 0.00 N ATOM 785 CA THR 103 7.412 90.924 8.927 1.00 0.00 C ATOM 786 C THR 103 7.322 90.642 7.463 1.00 0.00 C ATOM 787 O THR 103 8.329 90.480 6.790 1.00 0.00 O ATOM 788 CB THR 103 8.153 92.214 9.109 1.00 0.00 C ATOM 789 CG2 THR 103 7.316 93.378 8.525 1.00 0.00 C ATOM 790 OG1 THR 103 8.394 92.466 10.479 1.00 0.00 O ATOM 791 N LYS 104 6.082 90.607 6.967 1.00 0.00 N ATOM 792 CA LYS 104 5.800 90.270 5.604 1.00 0.00 C ATOM 793 C LYS 104 6.020 91.404 4.671 1.00 0.00 C ATOM 794 O LYS 104 5.895 91.226 3.457 1.00 0.00 O ATOM 795 CB LYS 104 4.314 89.876 5.447 1.00 0.00 C ATOM 796 CG LYS 104 3.955 88.668 6.302 1.00 0.00 C ATOM 797 CD LYS 104 4.790 87.430 6.062 1.00 0.00 C ATOM 798 CE LYS 104 4.586 86.692 4.757 1.00 0.00 C ATOM 799 NZ LYS 104 5.000 87.435 3.552 1.00 0.00 N ATOM 800 N ASP 105 6.369 92.597 5.175 1.00 0.00 N ATOM 801 CA ASP 105 6.731 93.634 4.262 1.00 0.00 C ATOM 802 C ASP 105 8.222 93.746 4.162 1.00 0.00 C ATOM 803 O ASP 105 8.796 93.615 3.080 1.00 0.00 O ATOM 804 CB ASP 105 6.190 95.007 4.688 1.00 0.00 C ATOM 805 CG ASP 105 4.672 94.919 4.748 1.00 0.00 C ATOM 806 OD1 ASP 105 4.051 94.659 3.683 1.00 0.00 O ATOM 807 OD2 ASP 105 4.115 95.107 5.862 1.00 0.00 O ATOM 808 N ARG 106 8.850 93.988 5.304 1.00 0.00 N ATOM 809 CA ARG 106 10.222 94.123 5.674 1.00 0.00 C ATOM 810 C ARG 106 11.074 92.907 5.416 1.00 0.00 C ATOM 811 O ARG 106 12.285 93.028 5.617 1.00 0.00 O ATOM 812 CB ARG 106 10.406 94.431 7.176 1.00 0.00 C ATOM 813 CG ARG 106 9.981 95.787 7.691 1.00 0.00 C ATOM 814 CD ARG 106 8.548 96.244 7.482 1.00 0.00 C ATOM 815 NE ARG 106 8.450 97.650 7.951 1.00 0.00 N ATOM 816 CZ ARG 106 8.854 98.679 7.149 1.00 0.00 C ATOM 817 NH1 ARG 106 9.283 98.435 5.880 1.00 0.00 H ATOM 818 NH2 ARG 106 8.825 99.958 7.629 1.00 0.00 H ATOM 819 N CYS 107 10.529 91.753 4.961 1.00 0.00 N ATOM 820 CA CYS 107 11.293 90.519 4.935 1.00 0.00 C ATOM 821 C CYS 107 12.309 90.482 3.824 1.00 0.00 C ATOM 822 O CYS 107 13.490 90.688 4.104 1.00 0.00 O ATOM 823 CB CYS 107 10.406 89.264 4.804 1.00 0.00 C ATOM 824 SG CYS 107 11.356 87.722 4.946 1.00 0.00 S ATOM 825 N GLY 108 11.918 90.236 2.561 1.00 0.00 N ATOM 826 CA GLY 108 12.844 90.443 1.485 1.00 0.00 C ATOM 827 C GLY 108 13.688 89.239 1.181 1.00 0.00 C ATOM 828 O GLY 108 14.324 89.249 0.113 1.00 0.00 O ATOM 829 N GLU 109 13.733 88.237 2.058 1.00 0.00 N ATOM 830 CA GLU 109 14.058 86.876 1.793 1.00 0.00 C ATOM 831 C GLU 109 15.541 86.773 1.609 1.00 0.00 C ATOM 832 O GLU 109 16.113 86.908 0.520 1.00 0.00 O ATOM 833 CB GLU 109 13.387 86.285 0.524 1.00 0.00 C ATOM 834 CG GLU 109 11.873 86.376 0.515 1.00 0.00 C ATOM 835 CD GLU 109 11.412 86.062 -0.902 1.00 0.00 C ATOM 836 OE1 GLU 109 11.702 84.935 -1.380 1.00 0.00 O ATOM 837 OE2 GLU 109 10.765 86.943 -1.524 1.00 0.00 O ATOM 838 N VAL 110 20.760 110.322 28.677 1.00 0.00 N ATOM 839 CA VAL 110 17.673 86.869 2.766 1.00 0.00 C ATOM 840 C VAL 110 18.425 85.578 2.974 1.00 0.00 C ATOM 841 O VAL 110 19.444 85.374 2.306 1.00 0.00 O ATOM 842 CB VAL 110 18.002 87.784 3.897 1.00 0.00 C ATOM 843 CG1 VAL 110 19.512 88.103 3.881 1.00 0.00 C ATOM 844 CG2 VAL 110 17.141 89.057 3.810 1.00 0.00 C ATOM 845 N ARG 111 17.948 84.748 3.904 1.00 0.00 N ATOM 846 CA ARG 111 18.537 83.555 4.439 1.00 0.00 C ATOM 847 C ARG 111 19.708 83.857 5.317 1.00 0.00 C ATOM 848 O ARG 111 20.711 83.141 5.389 1.00 0.00 O ATOM 849 CB ARG 111 18.865 82.491 3.362 1.00 0.00 C ATOM 850 CG ARG 111 17.619 82.154 2.543 1.00 0.00 C ATOM 851 CD ARG 111 16.465 81.535 3.333 1.00 0.00 C ATOM 852 NE ARG 111 16.957 80.221 3.852 1.00 0.00 N ATOM 853 CZ ARG 111 16.509 79.071 3.259 1.00 0.00 C ATOM 854 NH1 ARG 111 15.414 79.114 2.447 1.00 0.00 H ATOM 855 NH2 ARG 111 17.145 77.893 3.490 1.00 0.00 H ATOM 856 N ASN 112 19.623 84.978 6.074 1.00 0.00 N ATOM 857 CA ASN 112 20.450 85.124 7.240 1.00 0.00 C ATOM 858 C ASN 112 19.850 84.275 8.321 1.00 0.00 C ATOM 859 O ASN 112 20.565 83.659 9.108 1.00 0.00 O ATOM 860 CB ASN 112 20.411 86.555 7.821 1.00 0.00 C ATOM 861 CG ASN 112 20.914 87.574 6.812 1.00 0.00 C ATOM 862 ND2 ASN 112 20.291 88.785 6.847 1.00 0.00 N ATOM 863 OD1 ASN 112 21.824 87.339 6.017 1.00 0.00 O ATOM 864 N GLU 113 18.507 84.244 8.375 1.00 0.00 N ATOM 865 CA GLU 113 17.683 83.533 9.292 1.00 0.00 C ATOM 866 C GLU 113 17.889 82.055 9.157 1.00 0.00 C ATOM 867 O GLU 113 17.688 81.328 10.134 1.00 0.00 O ATOM 868 CB GLU 113 16.198 83.832 9.007 1.00 0.00 C ATOM 869 CG GLU 113 15.191 83.196 9.962 1.00 0.00 C ATOM 870 CD GLU 113 13.833 83.793 9.632 1.00 0.00 C ATOM 871 OE1 GLU 113 13.363 83.595 8.480 1.00 0.00 O ATOM 872 OE2 GLU 113 13.243 84.458 10.526 1.00 0.00 O ATOM 873 N GLU 114 18.285 81.558 7.973 1.00 0.00 N ATOM 874 CA GLU 114 18.722 80.202 7.837 1.00 0.00 C ATOM 875 C GLU 114 20.036 80.018 8.551 1.00 0.00 C ATOM 876 O GLU 114 20.221 79.020 9.245 1.00 0.00 O ATOM 877 CB GLU 114 18.994 79.795 6.386 1.00 0.00 C ATOM 878 CG GLU 114 19.375 78.318 6.234 1.00 0.00 C ATOM 879 CD GLU 114 19.976 78.082 4.870 1.00 0.00 C ATOM 880 OE1 GLU 114 20.870 78.866 4.451 1.00 0.00 O ATOM 881 OE2 GLU 114 19.555 77.090 4.214 1.00 0.00 O ATOM 882 N ASN 115 20.957 80.965 8.367 1.00 0.00 N ATOM 883 CA ASN 115 22.337 80.873 8.765 1.00 0.00 C ATOM 884 C ASN 115 22.446 80.957 10.264 1.00 0.00 C ATOM 885 O ASN 115 23.366 80.403 10.864 1.00 0.00 O ATOM 886 CB ASN 115 23.100 82.088 8.183 1.00 0.00 C ATOM 887 CG ASN 115 24.595 82.103 8.493 1.00 0.00 C ATOM 888 ND2 ASN 115 25.401 81.605 7.521 1.00 0.00 N ATOM 889 OD1 ASN 115 25.047 82.534 9.554 1.00 0.00 O ATOM 890 N ALA 116 21.515 81.656 10.910 1.00 0.00 N ATOM 891 CA ALA 116 21.549 81.810 12.320 1.00 0.00 C ATOM 892 C ALA 116 21.140 80.567 13.049 1.00 0.00 C ATOM 893 O ALA 116 21.885 80.071 13.890 1.00 0.00 O ATOM 894 CB ALA 116 20.614 82.933 12.803 1.00 0.00 C ATOM 895 N CYS 117 19.940 80.022 12.757 1.00 0.00 N ATOM 896 CA CYS 117 19.392 79.041 13.662 1.00 0.00 C ATOM 897 C CYS 117 19.932 77.684 13.373 1.00 0.00 C ATOM 898 O CYS 117 20.220 77.346 12.231 1.00 0.00 O ATOM 899 CB CYS 117 17.854 78.963 13.617 1.00 0.00 C ATOM 900 SG CYS 117 17.211 78.474 11.988 1.00 0.00 S ATOM 901 N HIS 118 20.087 76.858 14.437 1.00 0.00 N ATOM 902 CA HIS 118 20.904 75.663 14.367 1.00 0.00 C ATOM 903 C HIS 118 20.090 74.417 14.280 1.00 0.00 C ATOM 904 O HIS 118 20.484 73.318 14.680 1.00 0.00 O ATOM 905 CB HIS 118 21.975 75.550 15.463 1.00 0.00 C ATOM 906 CG HIS 118 22.901 76.717 15.436 1.00 0.00 C ATOM 907 CD2 HIS 118 23.428 77.460 16.449 1.00 0.00 C ATOM 908 ND1 HIS 118 23.406 77.253 14.271 1.00 0.00 N ATOM 909 CE1 HIS 118 24.287 78.220 14.640 1.00 0.00 C ATOM 910 NE2 HIS 118 24.326 78.387 15.946 1.00 0.00 N ATOM 911 N CYS 119 18.870 74.523 13.716 1.00 0.00 N ATOM 912 CA CYS 119 18.083 73.391 13.287 1.00 0.00 C ATOM 913 C CYS 119 18.182 73.195 11.796 1.00 0.00 C ATOM 914 O CYS 119 17.414 72.440 11.212 1.00 0.00 O ATOM 915 CB CYS 119 16.608 73.551 13.684 1.00 0.00 C ATOM 916 SG CYS 119 16.421 73.726 15.477 1.00 0.00 S ATOM 917 N SER 120 19.159 73.865 11.151 1.00 0.00 N ATOM 918 CA SER 120 19.492 73.667 9.776 1.00 0.00 C ATOM 919 C SER 120 20.762 72.867 9.730 1.00 0.00 C ATOM 920 O SER 120 21.619 72.932 10.610 1.00 0.00 O ATOM 921 CB SER 120 19.740 74.999 9.044 1.00 0.00 C ATOM 922 OG SER 120 20.080 74.771 7.684 1.00 0.00 O ATOM 923 N GLU 121 20.931 72.052 8.665 1.00 0.00 N ATOM 924 CA GLU 121 22.192 71.410 8.375 1.00 0.00 C ATOM 925 C GLU 121 23.197 72.445 7.971 1.00 0.00 C ATOM 926 O GLU 121 22.846 73.530 7.486 1.00 0.00 O ATOM 927 CB GLU 121 22.052 70.333 7.288 1.00 0.00 C ATOM 928 CG GLU 121 23.277 69.467 7.034 1.00 0.00 C ATOM 929 CD GLU 121 22.903 68.290 6.159 1.00 0.00 C ATOM 930 OE1 GLU 121 22.336 68.511 5.056 1.00 0.00 O ATOM 931 OE2 GLU 121 23.183 67.137 6.583 1.00 0.00 O ATOM 932 N ASP 122 24.485 72.142 8.174 1.00 0.00 N ATOM 933 CA ASP 122 25.648 72.787 7.697 1.00 0.00 C ATOM 934 C ASP 122 25.598 72.794 6.216 1.00 0.00 C ATOM 935 O ASP 122 25.779 73.823 5.572 1.00 0.00 O ATOM 936 CB ASP 122 26.906 72.008 8.122 1.00 0.00 C ATOM 937 CG ASP 122 28.147 72.772 7.687 1.00 0.00 C ATOM 938 OD1 ASP 122 28.358 73.887 8.220 1.00 0.00 O ATOM 939 OD2 ASP 122 28.876 72.248 6.805 1.00 0.00 O ATOM 940 N CYS 123 25.341 71.612 5.667 1.00 0.00 N ATOM 941 CA CYS 123 25.032 71.402 4.303 1.00 0.00 C ATOM 942 C CYS 123 23.725 72.045 4.013 1.00 0.00 C ATOM 943 O CYS 123 22.854 72.148 4.883 1.00 0.00 O ATOM 944 CB CYS 123 24.926 69.891 3.987 1.00 0.00 C ATOM 945 SG CYS 123 24.604 69.475 2.248 1.00 0.00 S ATOM 946 N LEU 124 23.552 72.510 2.765 1.00 0.00 N ATOM 947 CA LEU 124 22.590 73.517 2.484 1.00 0.00 C ATOM 948 C LEU 124 21.268 72.848 2.311 1.00 0.00 C ATOM 949 O LEU 124 21.089 71.974 1.472 1.00 0.00 O ATOM 950 CB LEU 124 22.898 74.278 1.179 1.00 0.00 C ATOM 951 CG LEU 124 21.894 75.391 0.823 1.00 0.00 C ATOM 952 CD1 LEU 124 21.805 76.447 1.933 1.00 0.00 C ATOM 953 CD2 LEU 124 22.202 75.998 -0.554 1.00 0.00 C ATOM 954 N SER 125 20.309 73.257 3.149 1.00 0.00 N ATOM 955 CA SER 125 19.146 72.441 3.359 1.00 0.00 C ATOM 956 C SER 125 17.975 73.326 3.612 1.00 0.00 C ATOM 957 O SER 125 18.011 74.547 3.410 1.00 0.00 O ATOM 958 CB SER 125 19.316 71.496 4.575 1.00 0.00 C ATOM 959 OG SER 125 20.392 70.618 4.358 1.00 0.00 O ATOM 960 N ARG 126 16.846 72.724 4.052 1.00 0.00 N ATOM 961 CA ARG 126 15.650 73.476 4.235 1.00 0.00 C ATOM 962 C ARG 126 15.760 74.216 5.531 1.00 0.00 C ATOM 963 O ARG 126 15.306 75.361 5.603 1.00 71.34 O ATOM 964 CB ARG 126 14.385 72.601 4.281 1.00 0.00 C ATOM 965 CG ARG 126 14.370 71.506 5.345 1.00 0.00 C ATOM 966 CD ARG 126 13.167 70.570 5.290 1.00 0.00 C ATOM 967 NE ARG 126 13.189 69.887 3.966 1.00 0.00 N ATOM 968 CZ ARG 126 12.382 70.337 2.961 1.00 0.00 C ATOM 969 NH1 ARG 126 11.667 71.486 3.137 1.00 0.00 H ATOM 970 NH2 ARG 126 12.291 69.645 1.789 1.00 0.00 H ATOM 971 N GLY 127 16.360 73.620 6.580 1.00 0.00 N ATOM 972 CA GLY 127 16.586 74.336 7.787 1.00 0.00 C ATOM 973 C GLY 127 15.307 74.317 8.548 1.00 0.00 C ATOM 974 O GLY 127 14.743 73.265 8.835 1.00 0.00 O ATOM 975 N ASP 128 14.792 75.513 8.895 1.00 0.00 N ATOM 976 CA ASP 128 13.395 75.544 9.225 1.00 0.00 C ATOM 977 C ASP 128 12.727 76.483 8.284 1.00 0.00 C ATOM 978 O ASP 128 11.743 76.134 7.633 1.00 0.00 O ATOM 979 CB ASP 128 13.093 76.044 10.641 1.00 0.00 C ATOM 980 CG ASP 128 13.840 75.182 11.645 1.00 0.00 C ATOM 981 OD1 ASP 128 13.371 74.052 11.942 1.00 0.00 O ATOM 982 OD2 ASP 128 14.900 75.653 12.128 1.00 0.00 O ATOM 983 N CYS 129 13.250 77.722 8.182 1.00 0.00 N ATOM 984 CA CYS 129 12.703 78.579 7.174 1.00 0.00 C ATOM 985 C CYS 129 13.299 78.231 5.857 1.00 0.00 C ATOM 986 O CYS 129 14.445 78.546 5.540 1.00 0.00 O ATOM 987 CB CYS 129 12.947 80.077 7.433 1.00 0.00 C ATOM 988 SG CYS 129 12.226 80.629 9.002 1.00 0.00 S ATOM 989 N CYS 130 12.492 77.531 5.047 1.00 0.00 N ATOM 990 CA CYS 130 12.697 77.429 3.632 1.00 0.00 C ATOM 991 C CYS 130 12.179 78.701 3.062 1.00 0.00 C ATOM 992 O CYS 130 11.252 79.336 3.587 1.00 0.00 O ATOM 993 CB CYS 130 11.878 76.256 3.042 1.00 0.00 C ATOM 994 SG CYS 130 11.991 76.065 1.238 1.00 0.00 S ATOM 995 N THR 131 12.745 79.151 1.922 1.00 0.00 N ATOM 996 CA THR 131 12.121 80.219 1.205 1.00 0.00 C ATOM 997 C THR 131 10.921 79.655 0.511 1.00 0.00 C ATOM 998 O THR 131 11.024 78.798 -0.360 1.00 0.00 O ATOM 999 CB THR 131 13.024 80.817 0.167 1.00 0.00 C ATOM 1000 0. THR 131 12.323 82.009 -0.525 1.00 0.00 X ATOM 1001 OG1 THR 131 14.222 81.277 0.779 1.00 0.00 O ATOM 1002 N ASN 132 9.747 80.153 0.914 1.00 0.00 N ATOM 1003 CA ASN 132 8.543 79.952 0.158 1.00 0.00 C ATOM 1004 C ASN 132 8.157 81.274 -0.398 1.00 0.00 C ATOM 1005 O ASN 132 8.913 82.255 -0.440 1.00 0.00 O ATOM 1006 CB ASN 132 7.398 79.457 1.071 1.00 0.00 C ATOM 1007 CG ASN 132 7.814 78.124 1.655 1.00 0.00 C ATOM 1008 ND2 ASN 132 8.531 78.168 2.810 1.00 0.00 N ATOM 1009 OD1 ASN 132 7.513 77.069 1.104 1.00 0.00 O ATOM 1010 N TYR 133 6.901 81.394 -0.896 1.00 0.00 N ATOM 1011 CA TYR 133 6.354 82.695 -1.099 1.00 0.00 C ATOM 1012 C TYR 133 6.011 83.299 0.224 1.00 0.00 C ATOM 1013 O TYR 133 5.981 84.526 0.338 1.00 0.00 O ATOM 1014 CB TYR 133 5.073 82.682 -1.961 1.00 0.00 C ATOM 1015 CG TYR 133 5.468 82.158 -3.298 1.00 0.00 C ATOM 1016 CD1 TYR 133 5.931 83.029 -4.258 1.00 0.00 C ATOM 1017 CD2 TYR 133 5.383 80.819 -3.598 1.00 0.00 C ATOM 1018 CE1 TYR 133 6.286 82.576 -5.506 1.00 0.00 C ATOM 1019 CE2 TYR 133 5.767 80.355 -4.836 1.00 0.00 C ATOM 1020 CZ TYR 133 6.212 81.236 -5.793 1.00 0.00 C ATOM 1021 OH TYR 133 6.592 80.767 -7.069 1.00 0.00 H ATOM 1022 N GLN 134 5.739 82.474 1.247 1.00 0.00 N ATOM 1023 CA GLN 134 5.520 82.898 2.586 1.00 0.00 C ATOM 1024 C GLN 134 6.823 83.420 3.135 1.00 0.00 C ATOM 1025 O GLN 134 6.811 84.522 3.705 1.00 0.00 O ATOM 1026 CB GLN 134 5.052 81.727 3.472 1.00 0.00 C ATOM 1027 CG GLN 134 3.786 81.055 2.929 1.00 0.00 C ATOM 1028 CD GLN 134 3.537 79.761 3.690 1.00 0.00 C ATOM 1029 NE2 GLN 134 2.268 79.561 4.141 1.00 0.00 N ATOM 1030 OE1 GLN 134 4.436 78.941 3.878 1.00 0.00 O ATOM 1031 N VAL 135 7.902 82.662 2.954 1.00 0.00 N ATOM 1032 CA VAL 135 9.230 82.660 3.529 1.00 0.00 C ATOM 1033 C VAL 135 9.169 82.923 4.993 1.00 0.00 C ATOM 1034 O VAL 135 9.594 83.894 5.636 1.00 0.00 O ATOM 1035 CB VAL 135 10.174 83.527 2.739 1.00 0.00 C ATOM 1036 CG1 VAL 135 9.750 85.013 2.698 1.00 0.00 C ATOM 1037 CG2 VAL 135 11.616 83.320 3.279 1.00 0.00 C ATOM 1038 N VAL 136 8.525 81.961 5.716 1.00 0.00 N ATOM 1039 CA VAL 136 8.215 82.105 7.119 1.00 0.00 C ATOM 1040 C VAL 136 8.251 80.735 7.744 1.00 0.00 C ATOM 1041 O VAL 136 8.351 79.687 7.104 1.00 0.00 O ATOM 1042 CB VAL 136 6.817 82.630 7.357 1.00 0.00 C ATOM 1043 CG1 VAL 136 6.706 84.082 6.852 1.00 0.00 C ATOM 1044 CG2 VAL 136 5.774 81.707 6.677 1.00 0.00 C ATOM 1045 N CYS 137 8.092 80.705 9.105 1.00 0.00 N ATOM 1046 CA CYS 137 7.355 79.610 9.724 1.00 0.00 C ATOM 1047 C CYS 137 6.362 80.350 10.579 1.00 0.00 C ATOM 1048 O CYS 137 6.748 81.062 11.507 1.00 0.00 O ATOM 1049 CB CYS 137 8.206 78.724 10.633 1.00 0.00 C ATOM 1050 SG CYS 137 7.219 77.483 11.531 1.00 0.00 S ATOM 1051 N LYS 138 5.058 80.195 10.269 1.00 0.00 N ATOM 1052 CA LYS 138 3.995 81.008 10.808 1.00 0.00 C ATOM 1053 C LYS 138 3.729 80.849 12.276 1.00 0.00 C ATOM 1054 O LYS 138 3.451 81.834 12.956 1.00 0.00 O ATOM 1055 CB LYS 138 2.662 80.742 10.098 1.00 0.00 C ATOM 1056 CG LYS 138 2.701 81.053 8.602 1.00 0.00 C ATOM 1057 CD LYS 138 1.330 80.934 7.936 1.00 0.00 C ATOM 1058 CE LYS 138 1.299 81.427 6.490 1.00 0.00 C ATOM 1059 NZ LYS 138 -0.045 81.205 5.912 1.00 0.00 N ATOM 1060 N GLY 139 3.811 79.625 12.823 1.00 0.00 N ATOM 1061 CA GLY 139 3.576 79.529 14.232 1.00 0.00 C ATOM 1062 C GLY 139 2.162 79.091 14.465 1.00 0.00 C ATOM 1063 O GLY 139 1.883 78.559 15.549 1.00 0.00 O ATOM 1064 N GLU 140 1.256 79.320 13.497 1.00 0.00 N ATOM 1065 CA GLU 140 -0.151 79.477 13.653 1.00 0.00 C ATOM 1066 C GLU 140 -0.400 80.658 14.543 1.00 0.00 C ATOM 1067 O GLU 140 -0.265 80.584 15.765 1.00 0.00 O ATOM 1068 CB GLU 140 -0.930 78.273 14.219 1.00 0.00 C ATOM 1069 CG GLU 140 -1.037 77.034 13.360 1.00 0.00 C ATOM 1070 CD GLU 140 0.298 76.347 13.116 1.00 0.00 C ATOM 1071 OE1 GLU 140 1.028 76.117 14.118 1.00 0.00 O ATOM 1072 OE2 GLU 140 0.619 76.068 11.932 1.00 0.00 O TER 7142 ILE 887 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 344 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 80.52 45.5 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 79.47 40.3 62 100.0 62 ARMSMC BURIED . . . . . . . . 82.97 57.7 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 103.90 23.1 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 101.65 25.0 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 105.24 19.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 101.18 30.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.90 21.7 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 85.46 27.8 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 85.13 25.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 93.91 14.3 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.73 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 89.20 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 87.38 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 79.99 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.80 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 93.80 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 103.70 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 69.92 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.54 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.54 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1676 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 7.36 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.97 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.95 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 7.94 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.97 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.53 164 99.4 165 CRMSSC RELIABLE SIDE CHAINS . 9.72 144 99.3 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 9.60 111 99.1 112 CRMSSC BURIED . . . . . . . . 9.39 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.70 344 99.7 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 8.72 239 99.6 240 CRMSALL BURIED . . . . . . . . 8.65 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.601 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 6.311 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 7.317 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.065 0.999 0.502 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 6.959 0.999 0.502 156 100.0 156 ERRMC BURIED . . . . . . . . 7.322 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.540 1.000 0.500 164 99.4 165 ERRSC RELIABLE SIDE CHAINS . 8.698 1.000 0.500 144 99.3 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 8.354 1.000 0.500 111 99.1 112 ERRSC BURIED . . . . . . . . 8.931 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.737 1.000 0.501 344 99.7 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 7.593 0.999 0.501 239 99.6 240 ERRALL BURIED . . . . . . . . 8.064 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 11 18 35 45 45 DISTCA CA (P) 0.00 4.44 24.44 40.00 77.78 45 DISTCA CA (RMS) 0.00 1.57 2.42 3.09 5.70 DISTCA ALL (N) 2 11 46 109 244 344 345 DISTALL ALL (P) 0.58 3.19 13.33 31.59 70.72 345 DISTALL ALL (RMS) 0.67 1.60 2.33 3.43 5.93 DISTALL END of the results output