####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS400_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS400_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 103 - 119 4.40 20.23 LONGEST_CONTINUOUS_SEGMENT: 17 104 - 120 4.73 20.22 LCS_AVERAGE: 33.68 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 107 - 115 1.67 22.67 LCS_AVERAGE: 16.35 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.93 22.74 LONGEST_CONTINUOUS_SEGMENT: 5 101 - 105 0.91 19.12 LONGEST_CONTINUOUS_SEGMENT: 5 114 - 118 0.77 22.19 LONGEST_CONTINUOUS_SEGMENT: 5 119 - 123 0.59 24.21 LONGEST_CONTINUOUS_SEGMENT: 5 133 - 137 0.67 26.41 LCS_AVERAGE: 9.58 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 6 11 3 3 3 4 6 6 7 8 9 10 11 11 12 13 14 16 18 20 20 24 LCS_GDT A 97 A 97 3 6 11 3 3 4 5 6 6 7 8 9 10 11 11 11 13 13 16 18 20 20 24 LCS_GDT R 98 R 98 3 6 11 3 3 4 5 6 9 10 12 12 12 13 14 14 15 16 17 18 20 22 24 LCS_GDT G 99 G 99 3 6 11 3 5 8 8 8 9 11 12 12 12 13 14 14 18 19 21 22 23 24 25 LCS_GDT W 100 W 100 5 6 11 3 4 8 8 8 9 11 12 12 12 13 14 14 18 19 21 22 23 24 25 LCS_GDT E 101 E 101 5 6 11 4 4 5 6 6 7 7 8 9 10 11 13 14 18 19 21 22 23 24 25 LCS_GDT C 102 C 102 5 6 11 4 4 5 6 6 7 7 8 9 10 11 12 14 18 19 21 22 23 24 25 LCS_GDT T 103 T 103 5 6 17 4 4 5 6 6 7 7 8 9 10 11 13 14 18 19 21 22 23 24 25 LCS_GDT K 104 K 104 5 6 17 4 4 5 6 6 7 9 13 13 14 15 15 16 18 19 21 22 23 24 25 LCS_GDT D 105 D 105 5 6 17 3 3 5 6 6 7 10 13 13 14 15 15 16 16 19 21 22 23 24 25 LCS_GDT R 106 R 106 3 4 17 3 3 3 4 5 7 10 13 13 14 15 15 16 18 19 21 22 23 24 25 LCS_GDT C 107 C 107 3 9 17 4 5 7 8 8 9 10 13 13 14 15 15 16 18 19 21 22 23 24 25 LCS_GDT G 108 G 108 3 9 17 4 5 7 8 8 9 10 13 13 14 15 15 16 18 19 21 22 23 24 25 LCS_GDT E 109 E 109 4 9 17 3 4 5 7 7 9 10 13 13 14 15 15 16 17 18 20 22 23 24 25 LCS_GDT V 110 V 110 4 9 17 2 4 6 8 8 9 10 13 13 14 15 15 16 17 18 20 21 23 24 25 LCS_GDT R 111 R 111 4 9 17 4 5 7 8 8 9 10 13 13 14 15 15 16 16 17 19 21 22 22 23 LCS_GDT N 112 N 112 4 9 17 4 4 7 8 8 9 10 13 13 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT E 113 E 113 4 9 17 3 3 7 8 8 9 10 13 13 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT E 114 E 114 5 9 17 3 5 7 8 8 9 10 13 13 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT N 115 N 115 5 9 17 3 5 7 8 8 9 10 13 13 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT A 116 A 116 5 7 17 3 5 5 6 8 9 9 10 11 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT C 117 C 117 5 7 17 3 5 5 6 8 9 10 13 13 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT H 118 H 118 5 6 17 3 5 5 6 8 9 9 11 12 14 15 15 16 17 18 20 21 22 22 23 LCS_GDT C 119 C 119 5 7 17 4 5 5 6 7 7 8 11 12 14 14 15 16 17 18 20 21 22 23 25 LCS_GDT S 120 S 120 5 7 17 4 5 5 6 8 9 9 10 11 11 12 14 15 17 18 21 22 23 24 25 LCS_GDT E 121 E 121 5 7 16 4 5 5 6 8 9 9 10 11 11 12 14 15 18 19 21 22 23 24 25 LCS_GDT D 122 D 122 5 7 15 4 5 5 6 8 9 9 10 11 11 12 14 14 18 19 21 22 23 24 25 LCS_GDT C 123 C 123 5 7 15 3 5 5 6 8 9 9 10 11 11 12 14 15 18 19 21 22 23 24 25 LCS_GDT L 124 L 124 4 7 15 3 4 4 5 8 9 9 10 11 11 12 14 15 17 19 21 22 23 24 25 LCS_GDT S 125 S 125 4 8 15 3 4 4 6 8 9 9 10 11 11 12 13 14 18 19 21 22 23 24 25 LCS_GDT R 126 R 126 4 8 15 3 4 6 7 8 8 8 9 10 11 12 13 14 15 15 17 18 23 24 25 LCS_GDT G 127 G 127 4 8 15 3 4 6 7 8 8 8 9 10 11 12 13 14 18 19 21 22 23 24 25 LCS_GDT D 128 D 128 4 8 15 3 4 6 7 8 8 8 9 10 11 13 14 14 18 19 21 22 23 24 25 LCS_GDT C 129 C 129 4 8 15 2 3 4 7 8 8 8 9 10 11 13 14 14 18 19 21 22 23 24 25 LCS_GDT C 130 C 130 4 8 15 2 4 6 7 8 8 11 12 12 12 13 14 14 18 19 21 22 23 24 25 LCS_GDT T 131 T 131 4 8 15 5 6 8 8 8 9 11 12 12 12 13 14 14 18 19 21 22 23 24 25 LCS_GDT N 132 N 132 4 8 15 3 4 6 7 8 8 8 10 11 12 13 13 14 15 16 16 18 20 24 25 LCS_GDT Y 133 Y 133 5 8 15 5 6 8 8 8 9 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT Q 134 Q 134 5 8 15 5 6 8 8 8 9 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT V 135 V 135 5 8 15 5 6 8 8 8 9 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT V 136 V 136 5 8 15 5 6 8 8 8 9 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT C 137 C 137 5 8 15 4 6 8 8 8 9 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT K 138 K 138 4 8 15 3 4 4 5 7 8 11 12 12 12 13 14 14 15 16 17 18 19 19 19 LCS_GDT G 139 G 139 4 7 15 3 4 4 4 7 8 11 12 12 12 13 14 14 15 16 17 18 19 19 20 LCS_GDT E 140 E 140 4 5 13 3 3 4 4 5 5 5 5 6 8 8 10 11 12 12 15 16 19 19 19 LCS_AVERAGE LCS_A: 19.87 ( 9.58 16.35 33.68 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 8 8 8 9 11 13 13 14 15 15 16 18 19 21 22 23 24 25 GDT PERCENT_AT 11.11 13.33 17.78 17.78 17.78 20.00 24.44 28.89 28.89 31.11 33.33 33.33 35.56 40.00 42.22 46.67 48.89 51.11 53.33 55.56 GDT RMS_LOCAL 0.37 0.64 0.84 0.84 0.84 1.22 2.32 3.04 3.04 3.20 3.55 3.55 3.84 5.61 5.72 6.01 6.29 6.43 6.70 6.96 GDT RMS_ALL_AT 25.34 25.88 26.22 26.22 26.22 26.42 25.49 21.62 21.62 21.72 21.17 21.17 20.79 17.23 17.26 17.24 16.83 16.91 16.48 16.13 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 42.220 0 0.400 0.510 45.251 0.000 0.000 LGA A 97 A 97 37.598 0 0.062 0.176 39.667 0.000 0.000 LGA R 98 R 98 33.928 0 0.146 1.147 35.977 0.000 0.000 LGA G 99 G 99 32.027 0 0.523 0.523 32.835 0.000 0.000 LGA W 100 W 100 28.217 0 0.458 0.503 34.969 0.000 0.000 LGA E 101 E 101 22.307 0 0.067 1.173 24.963 0.000 0.000 LGA C 102 C 102 16.532 0 0.080 0.720 18.757 0.000 0.000 LGA T 103 T 103 10.361 0 0.129 1.029 12.654 1.905 1.224 LGA K 104 K 104 4.737 0 0.613 1.207 7.043 29.762 28.995 LGA D 105 D 105 3.490 0 0.667 1.047 5.818 37.976 35.536 LGA R 106 R 106 3.863 0 0.638 1.213 13.396 48.690 20.216 LGA C 107 C 107 3.088 0 0.647 0.602 4.875 55.476 47.460 LGA G 108 G 108 2.881 0 0.233 0.233 2.881 71.548 71.548 LGA E 109 E 109 2.962 0 0.363 1.001 8.623 71.071 40.794 LGA V 110 V 110 1.333 0 0.061 1.103 4.073 79.524 72.789 LGA R 111 R 111 2.037 0 0.384 1.256 13.113 77.619 34.589 LGA N 112 N 112 2.164 0 0.547 1.130 6.073 58.452 48.512 LGA E 113 E 113 0.602 0 0.443 0.737 4.617 83.810 65.767 LGA E 114 E 114 2.785 0 0.264 0.758 6.772 51.190 40.317 LGA N 115 N 115 3.183 0 0.594 0.542 9.330 67.500 39.107 LGA A 116 A 116 5.053 0 0.522 0.533 7.751 30.595 25.905 LGA C 117 C 117 3.911 0 0.244 0.854 4.298 40.238 45.952 LGA H 118 H 118 7.206 0 0.541 1.237 9.557 10.357 6.619 LGA C 119 C 119 8.246 0 0.407 0.362 10.137 3.810 12.302 LGA S 120 S 120 14.625 0 0.608 0.806 17.339 0.000 0.000 LGA E 121 E 121 17.645 0 0.450 1.199 20.815 0.000 0.000 LGA D 122 D 122 22.084 0 0.157 1.181 26.094 0.000 0.000 LGA C 123 C 123 17.917 0 0.364 0.836 18.983 0.000 0.000 LGA L 124 L 124 17.449 0 0.064 1.399 20.588 0.000 0.000 LGA S 125 S 125 24.045 0 0.391 0.590 26.324 0.000 0.000 LGA R 126 R 126 23.246 0 0.311 0.962 24.326 0.000 0.000 LGA G 127 G 127 24.388 0 0.397 0.397 24.388 0.000 0.000 LGA D 128 D 128 24.256 0 0.553 1.452 24.395 0.000 0.000 LGA C 129 C 129 23.420 0 0.344 0.892 25.635 0.000 0.000 LGA C 130 C 130 24.419 0 0.129 0.856 26.390 0.000 0.000 LGA T 131 T 131 24.882 0 0.540 1.109 28.531 0.000 0.000 LGA N 132 N 132 23.416 0 0.113 0.434 25.578 0.000 0.000 LGA Y 133 Y 133 27.086 0 0.204 1.294 29.192 0.000 0.000 LGA Q 134 Q 134 28.152 0 0.053 0.160 31.229 0.000 0.000 LGA V 135 V 135 25.089 0 0.048 0.078 26.001 0.000 0.000 LGA V 136 V 136 26.259 0 0.038 1.017 28.156 0.000 0.000 LGA C 137 C 137 30.944 0 0.250 0.791 34.126 0.000 0.000 LGA K 138 K 138 34.543 0 0.437 1.123 44.290 0.000 0.000 LGA G 139 G 139 32.860 0 0.602 0.602 34.273 0.000 0.000 LGA E 140 E 140 37.235 0 0.109 1.045 43.951 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 13.460 13.384 14.174 18.212 14.170 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 13 3.04 26.667 23.482 0.414 LGA_LOCAL RMSD: 3.042 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.617 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 13.460 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.528331 * X + -0.821640 * Y + -0.213949 * Z + 7.476465 Y_new = 0.492486 * X + 0.091304 * Y + 0.865518 * Z + -0.095087 Z_new = -0.691610 * X + -0.562647 * Y + 0.452885 * Z + 65.511086 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.750299 0.763715 -0.893063 [DEG: 42.9889 43.7577 -51.1687 ] ZXZ: -2.899259 1.100798 -2.253734 [DEG: -166.1153 63.0711 -129.1295 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS400_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS400_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 13 3.04 23.482 13.46 REMARK ---------------------------------------------------------- MOLECULE T0543TS400_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 -16.740 100.445 -2.388 1.00 0.00 N ATOM 729 CA THR 96 -16.292 101.732 -2.229 1.00 0.00 C ATOM 730 C THR 96 -14.967 101.902 -1.861 1.00 0.00 C ATOM 731 O THR 96 -14.672 102.428 -0.784 1.00 0.00 O ATOM 732 CB THR 96 -17.217 102.530 -1.210 1.00 0.00 C ATOM 733 OG1 THR 96 -18.600 102.249 -1.281 1.00 0.00 O ATOM 734 CG2 THR 96 -17.042 104.057 -1.218 1.00 0.00 C ATOM 735 N ALA 97 -14.168 101.457 -2.797 1.00 0.00 N ATOM 736 CA ALA 97 -12.868 101.702 -2.453 1.00 0.00 C ATOM 737 C ALA 97 -11.907 101.832 -3.550 1.00 0.00 C ATOM 738 O ALA 97 -11.896 101.104 -4.538 1.00 0.00 O ATOM 739 CB ALA 97 -12.240 101.242 -1.188 1.00 0.00 C ATOM 740 N ARG 98 -11.130 102.858 -3.310 1.00 0.00 N ATOM 741 CA ARG 98 -10.557 103.572 -4.316 1.00 0.00 C ATOM 742 C ARG 98 -9.078 103.515 -4.369 1.00 0.00 C ATOM 743 O ARG 98 -8.421 104.494 -4.761 1.00 0.00 O ATOM 744 CB ARG 98 -10.951 105.078 -4.224 1.00 0.00 C ATOM 745 CG ARG 98 -12.347 105.452 -4.648 1.00 0.00 C ATOM 746 CD ARG 98 -12.585 105.129 -6.131 1.00 0.00 C ATOM 747 NE ARG 98 -11.602 105.799 -7.013 1.00 0.00 N ATOM 748 CZ ARG 98 -11.683 107.051 -7.456 1.00 0.00 C ATOM 749 NH1 ARG 98 -10.730 107.552 -8.251 1.00 0.00 H ATOM 750 NH2 ARG 98 -12.719 107.810 -7.100 1.00 0.00 H ATOM 751 N GLY 99 -8.560 102.331 -4.181 1.00 0.00 N ATOM 752 CA GLY 99 -7.159 102.353 -4.179 1.00 0.00 C ATOM 753 C GLY 99 -6.457 101.327 -3.433 1.00 0.00 C ATOM 754 O GLY 99 -5.437 100.884 -3.982 1.00 0.00 O ATOM 755 N TRP 100 -7.045 100.979 -2.294 1.00 0.00 N ATOM 756 CA TRP 100 -6.709 99.924 -1.357 1.00 0.00 C ATOM 757 C TRP 100 -5.224 99.763 -1.364 1.00 0.00 C ATOM 758 O TRP 100 -4.635 99.100 -2.225 1.00 0.00 O ATOM 759 CB TRP 100 -7.270 98.665 -1.843 1.00 0.00 C ATOM 760 CG TRP 100 -8.711 98.597 -1.865 1.00 0.00 C ATOM 761 CD1 TRP 100 -9.627 99.534 -2.100 1.00 0.00 C ATOM 762 CD2 TRP 100 -9.413 97.527 -1.298 1.00 0.00 C ATOM 763 NE1 TRP 100 -10.807 98.873 -2.012 1.00 0.00 N ATOM 764 CE2 TRP 100 -10.779 97.712 -1.370 1.00 0.00 C ATOM 765 CE3 TRP 100 -9.041 96.540 -0.473 1.00 0.00 C ATOM 766 CZ2 TRP 100 -11.682 96.802 -0.786 1.00 0.00 C ATOM 767 CZ3 TRP 100 -9.889 95.520 -0.271 1.00 0.00 C ATOM 768 CH2 TRP 100 -11.205 95.763 -0.033 1.00 0.00 H ATOM 769 N GLU 101 -4.556 100.443 -0.470 1.00 0.00 N ATOM 770 CA GLU 101 -3.181 100.168 -0.354 1.00 0.00 C ATOM 771 C GLU 101 -3.122 98.989 0.558 1.00 0.00 C ATOM 772 O GLU 101 -3.786 98.891 1.601 1.00 0.00 O ATOM 773 CB GLU 101 -2.384 101.321 0.180 1.00 0.00 C ATOM 774 CG GLU 101 -2.390 102.482 -0.849 1.00 0.00 C ATOM 775 CD GLU 101 -3.535 103.448 -0.674 1.00 0.00 C ATOM 776 OE1 GLU 101 -4.495 103.028 -0.015 1.00 0.00 O ATOM 777 OE2 GLU 101 -3.450 104.602 -1.161 1.00 0.00 O ATOM 778 N CYS 102 -2.386 98.043 0.042 1.00 0.00 N ATOM 779 CA CYS 102 -2.043 96.900 0.777 1.00 0.00 C ATOM 780 C CYS 102 -0.602 97.067 1.028 1.00 0.00 C ATOM 781 O CYS 102 0.071 97.625 0.190 1.00 0.00 O ATOM 782 CB CYS 102 -2.720 95.624 0.421 1.00 0.00 C ATOM 783 SG CYS 102 -2.117 94.221 1.357 1.00 0.00 S ATOM 784 N THR 103 -0.161 96.618 2.159 1.00 0.00 N ATOM 785 CA THR 103 1.222 96.412 2.258 1.00 0.00 C ATOM 786 C THR 103 1.378 94.937 2.412 1.00 0.00 C ATOM 787 O THR 103 0.811 94.342 3.304 1.00 0.00 O ATOM 788 CB THR 103 1.660 97.134 3.512 1.00 0.00 C ATOM 789 OG1 THR 103 1.562 98.540 3.297 1.00 0.00 O ATOM 790 CG2 THR 103 3.087 96.770 3.822 1.00 0.00 C ATOM 791 N LYS 104 2.229 94.391 1.560 1.00 0.00 N ATOM 792 CA LYS 104 2.749 93.105 1.836 1.00 0.00 C ATOM 793 C LYS 104 4.153 93.233 2.277 1.00 0.00 C ATOM 794 O LYS 104 5.006 93.572 1.479 1.00 0.00 O ATOM 795 CB LYS 104 2.701 92.275 0.529 1.00 0.00 C ATOM 796 CG LYS 104 1.267 92.077 0.030 1.00 0.00 C ATOM 797 CD LYS 104 1.200 91.183 -1.207 1.00 0.00 C ATOM 798 CE LYS 104 -0.232 90.991 -1.671 1.00 0.00 C ATOM 799 NZ LYS 104 -0.310 90.229 -2.924 1.00 0.00 N ATOM 800 N ASP 105 4.344 92.926 3.549 1.00 0.00 N ATOM 801 CA ASP 105 5.647 93.014 4.130 1.00 0.00 C ATOM 802 C ASP 105 6.356 91.729 3.829 1.00 0.00 C ATOM 803 O ASP 105 5.873 90.634 4.126 1.00 0.00 O ATOM 804 CB ASP 105 5.541 93.115 5.653 1.00 0.00 C ATOM 805 CG ASP 105 5.040 94.479 6.055 1.00 0.00 C ATOM 806 OD1 ASP 105 5.848 95.386 5.785 1.00 0.00 O ATOM 807 OD2 ASP 105 3.895 94.532 6.562 1.00 0.00 O ATOM 808 N ARG 106 7.508 91.890 3.204 1.00 0.00 N ATOM 809 CA ARG 106 8.359 90.784 2.937 1.00 0.00 C ATOM 810 C ARG 106 9.577 90.836 3.832 1.00 0.00 C ATOM 811 O ARG 106 10.207 91.876 4.041 1.00 0.00 O ATOM 812 CB ARG 106 8.746 90.752 1.460 1.00 0.00 C ATOM 813 CG ARG 106 9.573 89.531 1.049 1.00 0.00 C ATOM 814 CD ARG 106 9.839 89.501 -0.447 1.00 0.00 C ATOM 815 NE ARG 106 10.670 88.349 -0.834 1.00 0.00 N ATOM 816 CZ ARG 106 11.048 88.051 -2.074 1.00 0.00 C ATOM 817 NH1 ARG 106 11.794 86.961 -2.309 1.00 0.00 H ATOM 818 NH2 ARG 106 10.669 88.853 -3.079 1.00 0.00 H ATOM 819 N CYS 107 9.954 89.631 4.260 1.00 0.00 N ATOM 820 CA CYS 107 11.059 89.395 5.167 1.00 0.00 C ATOM 821 C CYS 107 12.411 89.354 4.537 1.00 0.00 C ATOM 822 O CYS 107 13.437 89.474 5.190 1.00 0.00 O ATOM 823 CB CYS 107 10.877 88.033 5.851 1.00 0.00 C ATOM 824 SG CYS 107 9.607 88.245 7.099 1.00 0.00 S ATOM 825 N GLY 108 12.402 89.092 3.245 1.00 0.00 N ATOM 826 CA GLY 108 13.577 89.359 2.496 1.00 0.00 C ATOM 827 C GLY 108 14.232 88.171 2.005 1.00 0.00 C ATOM 828 O GLY 108 14.714 88.177 0.875 1.00 0.00 O ATOM 829 N GLU 109 14.332 87.239 2.951 1.00 0.00 N ATOM 830 CA GLU 109 15.201 86.130 2.854 1.00 0.00 C ATOM 831 C GLU 109 16.571 86.478 2.616 1.00 0.00 C ATOM 832 O GLU 109 17.156 86.308 1.539 1.00 0.00 O ATOM 833 CB GLU 109 14.752 85.291 1.595 1.00 0.00 C ATOM 834 CG GLU 109 13.310 84.785 1.594 1.00 0.00 C ATOM 835 CD GLU 109 12.985 84.193 0.230 1.00 0.00 C ATOM 836 OE1 GLU 109 13.305 83.002 0.031 1.00 0.00 O ATOM 837 OE2 GLU 109 12.462 84.983 -0.620 1.00 0.00 O ATOM 838 N VAL 110 17.000 87.094 3.671 1.00 0.00 N ATOM 839 CA VAL 110 18.283 87.531 3.575 1.00 0.00 C ATOM 840 C VAL 110 18.977 86.998 4.767 1.00 0.00 C ATOM 841 O VAL 110 18.560 87.127 5.913 1.00 0.00 O ATOM 842 CB VAL 110 18.306 88.997 3.103 1.00 0.00 C ATOM 843 CG1 VAL 110 19.701 89.381 2.852 1.00 0.00 C ATOM 844 CG2 VAL 110 17.482 89.349 1.929 1.00 0.00 C ATOM 845 N ARG 111 20.073 86.405 4.386 1.00 0.00 N ATOM 846 CA ARG 111 21.273 86.550 5.074 1.00 0.00 C ATOM 847 C ARG 111 21.192 85.798 6.385 1.00 0.00 C ATOM 848 O ARG 111 20.925 84.597 6.367 1.00 0.00 O ATOM 849 CB ARG 111 21.842 87.960 5.254 1.00 0.00 C ATOM 850 CG ARG 111 22.214 88.682 4.028 1.00 0.00 C ATOM 851 CD ARG 111 23.465 88.390 3.344 1.00 0.00 C ATOM 852 NE ARG 111 23.475 89.246 2.154 1.00 0.00 N ATOM 853 CZ ARG 111 24.363 89.042 1.198 1.00 0.00 C ATOM 854 NH1 ARG 111 24.508 89.934 0.223 1.00 0.00 H ATOM 855 NH2 ARG 111 25.055 87.912 1.211 1.00 0.00 H ATOM 856 N ASN 112 21.612 86.480 7.465 1.00 0.00 N ATOM 857 CA ASN 112 22.949 86.122 7.943 1.00 0.00 C ATOM 858 C ASN 112 22.958 84.742 8.398 1.00 0.00 C ATOM 859 O ASN 112 23.645 83.877 7.859 1.00 0.00 O ATOM 860 CB ASN 112 23.692 87.236 8.726 1.00 0.00 C ATOM 861 CG ASN 112 24.623 88.128 7.903 1.00 0.00 C ATOM 862 OD1 ASN 112 24.854 87.917 6.714 1.00 0.00 O ATOM 863 ND2 ASN 112 25.178 89.137 8.554 1.00 0.00 N ATOM 864 N GLU 113 22.155 84.607 9.424 1.00 0.00 N ATOM 865 CA GLU 113 22.886 84.074 10.457 1.00 0.00 C ATOM 866 C GLU 113 22.158 83.376 11.514 1.00 0.00 C ATOM 867 O GLU 113 21.533 82.341 11.298 1.00 0.00 O ATOM 868 CB GLU 113 24.046 84.952 10.984 1.00 0.00 C ATOM 869 CG GLU 113 25.176 84.248 11.780 1.00 0.00 C ATOM 870 CD GLU 113 26.060 83.342 10.928 1.00 0.00 C ATOM 871 OE1 GLU 113 26.114 83.561 9.694 1.00 0.00 O ATOM 872 OE2 GLU 113 26.667 82.435 11.512 1.00 0.00 O ATOM 873 N GLU 114 22.371 83.982 12.687 1.00 0.00 N ATOM 874 CA GLU 114 22.497 83.255 13.914 1.00 0.00 C ATOM 875 C GLU 114 21.221 82.559 14.135 1.00 0.00 C ATOM 876 O GLU 114 21.143 81.354 14.302 1.00 0.00 O ATOM 877 CB GLU 114 22.805 84.213 15.077 1.00 0.00 C ATOM 878 CG GLU 114 22.796 83.515 16.452 1.00 0.00 C ATOM 879 CD GLU 114 23.116 84.490 17.565 1.00 0.00 C ATOM 880 OE1 GLU 114 24.231 85.050 17.485 1.00 0.00 O ATOM 881 OE2 GLU 114 22.230 84.655 18.422 1.00 0.00 O ATOM 882 N ASN 115 20.216 83.399 13.908 1.00 0.00 N ATOM 883 CA ASN 115 18.923 82.938 13.892 1.00 0.00 C ATOM 884 C ASN 115 18.003 83.327 12.845 1.00 0.00 C ATOM 885 O ASN 115 16.787 83.232 13.006 1.00 0.00 O ATOM 886 CB ASN 115 18.327 83.086 15.336 1.00 0.00 C ATOM 887 CG ASN 115 19.030 82.337 16.482 1.00 0.00 C ATOM 888 OD1 ASN 115 19.194 81.120 16.435 1.00 0.00 O ATOM 889 ND2 ASN 115 19.464 83.031 17.524 1.00 0.00 N ATOM 890 N ALA 116 18.654 83.854 11.838 1.00 0.00 N ATOM 891 CA ALA 116 18.229 84.886 10.990 1.00 0.00 C ATOM 892 C ALA 116 16.784 85.096 10.701 1.00 0.00 C ATOM 893 O ALA 116 16.247 84.810 9.625 1.00 0.00 O ATOM 894 CB ALA 116 18.776 84.492 9.595 1.00 0.00 C ATOM 895 N CYS 117 16.131 85.552 11.728 1.00 0.00 N ATOM 896 CA CYS 117 14.794 85.573 11.675 1.00 0.00 C ATOM 897 C CYS 117 14.163 86.410 12.714 1.00 0.00 C ATOM 898 O CYS 117 14.398 87.612 12.868 1.00 0.00 O ATOM 899 CB CYS 117 14.253 84.060 11.616 1.00 0.00 C ATOM 900 SG CYS 117 12.551 83.901 10.983 1.00 0.00 S ATOM 901 N HIS 118 13.261 85.684 13.345 1.00 0.00 N ATOM 902 CA HIS 118 12.321 86.020 14.311 1.00 0.00 C ATOM 903 C HIS 118 11.517 87.225 13.992 1.00 0.00 C ATOM 904 O HIS 118 11.178 88.024 14.865 1.00 0.00 O ATOM 905 CB HIS 118 13.129 86.312 15.614 1.00 0.00 C ATOM 906 CG HIS 118 13.855 85.126 16.192 1.00 0.00 C ATOM 907 ND1 HIS 118 13.155 84.083 16.795 1.00 0.00 N ATOM 908 CD2 HIS 118 15.205 84.859 16.237 1.00 0.00 C ATOM 909 CE1 HIS 118 14.099 83.226 17.179 1.00 0.00 C ATOM 910 NE2 HIS 118 15.328 83.634 16.891 1.00 0.00 N ATOM 911 N CYS 119 11.244 87.357 12.706 1.00 0.00 N ATOM 912 CA CYS 119 10.554 88.494 12.280 1.00 0.00 C ATOM 913 C CYS 119 9.083 88.215 12.606 1.00 0.00 C ATOM 914 O CYS 119 8.409 87.467 11.905 1.00 0.00 O ATOM 915 CB CYS 119 10.668 88.694 10.760 1.00 0.00 C ATOM 916 SG CYS 119 12.384 88.556 10.223 1.00 0.00 S ATOM 917 N SER 120 8.666 88.723 13.777 1.00 0.00 N ATOM 918 CA SER 120 7.715 88.136 14.715 1.00 0.00 C ATOM 919 C SER 120 6.543 87.389 14.155 1.00 0.00 C ATOM 920 O SER 120 6.233 86.328 14.666 1.00 0.00 O ATOM 921 CB SER 120 7.283 89.215 15.717 1.00 0.00 C ATOM 922 OG SER 120 6.344 88.856 16.710 1.00 0.00 O ATOM 923 N GLU 121 5.876 88.051 13.192 1.00 0.00 N ATOM 924 CA GLU 121 4.508 87.788 12.783 1.00 0.00 C ATOM 925 C GLU 121 3.664 87.953 14.078 1.00 0.00 C ATOM 926 O GLU 121 3.255 86.986 14.696 1.00 0.00 O ATOM 927 CB GLU 121 4.479 86.333 12.217 1.00 0.00 C ATOM 928 CG GLU 121 3.180 85.892 11.518 1.00 0.00 C ATOM 929 CD GLU 121 3.266 84.460 10.983 1.00 0.00 C ATOM 930 OE1 GLU 121 4.362 83.856 11.043 1.00 0.00 O ATOM 931 OE2 GLU 121 2.243 84.011 10.431 1.00 0.00 O ATOM 932 N ASP 122 3.620 89.163 14.660 1.00 0.00 N ATOM 933 CA ASP 122 3.208 90.424 14.043 1.00 0.00 C ATOM 934 C ASP 122 4.167 91.218 13.288 1.00 0.00 C ATOM 935 O ASP 122 3.739 91.951 12.413 1.00 0.00 O ATOM 936 CB ASP 122 2.765 91.360 15.181 1.00 0.00 C ATOM 937 CG ASP 122 1.459 91.094 15.888 1.00 0.00 C ATOM 938 OD1 ASP 122 0.622 90.383 15.307 1.00 0.00 O ATOM 939 OD2 ASP 122 1.334 91.650 16.998 1.00 0.00 O ATOM 940 N CYS 123 5.448 91.077 13.544 1.00 0.00 N ATOM 941 CA CYS 123 6.357 91.717 12.641 1.00 0.00 C ATOM 942 C CYS 123 6.762 90.779 11.488 1.00 0.00 C ATOM 943 O CYS 123 7.904 90.747 11.007 1.00 0.00 O ATOM 944 CB CYS 123 7.680 92.174 13.341 1.00 0.00 C ATOM 945 SG CYS 123 8.592 93.388 12.314 1.00 0.00 S ATOM 946 N LEU 124 5.826 89.941 11.102 1.00 0.00 N ATOM 947 CA LEU 124 5.621 89.573 9.743 1.00 0.00 C ATOM 948 C LEU 124 4.456 90.405 9.214 1.00 0.00 C ATOM 949 O LEU 124 4.550 90.934 8.115 1.00 0.00 O ATOM 950 CB LEU 124 5.386 88.064 9.645 1.00 0.00 C ATOM 951 CG LEU 124 5.259 87.444 8.254 1.00 0.00 C ATOM 952 CD1 LEU 124 6.482 87.665 7.393 1.00 0.00 C ATOM 953 CD2 LEU 124 4.896 85.970 8.315 1.00 0.00 C ATOM 954 N SER 125 3.404 90.541 10.026 1.00 0.00 N ATOM 955 CA SER 125 2.247 91.406 9.902 1.00 0.00 C ATOM 956 C SER 125 1.319 90.876 8.931 1.00 0.00 C ATOM 957 O SER 125 0.402 90.133 9.278 1.00 0.00 O ATOM 958 CB SER 125 2.607 92.924 9.710 1.00 0.00 C ATOM 959 OG SER 125 1.467 93.773 9.647 1.00 0.00 O ATOM 960 N ARG 126 1.666 91.257 7.704 1.00 0.00 N ATOM 961 CA ARG 126 1.032 90.753 6.557 1.00 0.00 C ATOM 962 C ARG 126 -0.452 91.057 6.623 1.00 0.00 C ATOM 963 O ARG 126 -1.324 90.196 6.442 1.00 0.00 O ATOM 964 CB ARG 126 1.153 89.203 6.485 1.00 0.00 C ATOM 965 CG ARG 126 2.575 88.723 6.463 1.00 0.00 C ATOM 966 CD ARG 126 3.285 88.975 5.147 1.00 0.00 C ATOM 967 NE ARG 126 2.571 88.249 4.099 1.00 0.00 N ATOM 968 CZ ARG 126 2.766 86.971 3.785 1.00 0.00 C ATOM 969 NH1 ARG 126 2.003 86.413 2.835 1.00 0.00 H ATOM 970 NH2 ARG 126 3.706 86.252 4.411 1.00 0.00 H ATOM 971 N GLY 127 -0.732 92.306 6.951 1.00 0.00 N ATOM 972 CA GLY 127 -1.847 93.009 6.383 1.00 0.00 C ATOM 973 C GLY 127 -2.110 92.667 5.057 1.00 0.00 C ATOM 974 O GLY 127 -1.317 92.986 4.183 1.00 0.00 O ATOM 975 N ASP 128 -3.243 92.036 4.957 1.00 0.00 N ATOM 976 CA ASP 128 -3.697 92.035 3.683 1.00 0.00 C ATOM 977 C ASP 128 -5.131 92.539 3.655 1.00 0.00 C ATOM 978 O ASP 128 -5.975 92.148 4.468 1.00 0.00 O ATOM 979 CB ASP 128 -3.322 90.721 2.904 1.00 0.00 C ATOM 980 CG ASP 128 -1.850 90.318 2.715 1.00 0.00 C ATOM 981 OD1 ASP 128 -1.251 90.890 1.773 1.00 0.00 O ATOM 982 OD2 ASP 128 -1.379 89.315 3.286 1.00 0.00 O ATOM 983 N CYS 129 -5.436 93.267 2.582 1.00 0.00 N ATOM 984 CA CYS 129 -6.347 92.752 1.591 1.00 0.00 C ATOM 985 C CYS 129 -7.577 93.414 1.557 1.00 0.00 C ATOM 986 O CYS 129 -7.623 94.559 1.223 1.00 0.00 O ATOM 987 CB CYS 129 -6.511 91.147 1.711 1.00 0.00 C ATOM 988 SG CYS 129 -7.377 90.208 0.424 1.00 0.00 S ATOM 989 N CYS 130 -8.600 92.682 1.830 1.00 0.00 N ATOM 990 CA CYS 130 -9.795 92.992 1.225 1.00 0.00 C ATOM 991 C CYS 130 -10.704 92.616 2.244 1.00 0.00 C ATOM 992 O CYS 130 -10.669 91.505 2.795 1.00 0.00 O ATOM 993 CB CYS 130 -9.919 92.235 -0.102 1.00 0.00 C ATOM 994 SG CYS 130 -11.526 92.378 -0.824 1.00 0.00 S ATOM 995 N THR 131 -11.419 93.695 2.538 1.00 0.00 N ATOM 996 CA THR 131 -12.340 93.719 3.514 1.00 0.00 C ATOM 997 C THR 131 -13.367 92.630 3.256 1.00 0.00 C ATOM 998 O THR 131 -13.287 91.517 2.727 1.00 0.00 O ATOM 999 CB THR 131 -12.935 95.183 3.857 1.00 0.00 C ATOM 1000 OG1 THR 131 -12.118 95.985 4.589 1.00 0.00 O ATOM 1001 CG2 THR 131 -13.896 95.370 5.077 1.00 0.00 C ATOM 1002 N ASN 132 -14.446 93.134 3.615 1.00 0.00 N ATOM 1003 CA ASN 132 -15.673 92.699 3.293 1.00 0.00 C ATOM 1004 C ASN 132 -16.545 93.653 2.713 1.00 0.00 C ATOM 1005 O ASN 132 -17.622 93.311 2.240 1.00 0.00 O ATOM 1006 CB ASN 132 -16.265 92.129 4.633 1.00 0.00 C ATOM 1007 CG ASN 132 -16.734 93.115 5.728 1.00 0.00 C ATOM 1008 OD1 ASN 132 -16.965 94.293 5.509 1.00 0.00 O ATOM 1009 ND2 ASN 132 -16.863 92.700 6.968 1.00 0.00 N ATOM 1010 N TYR 133 -16.001 94.870 2.809 1.00 0.00 N ATOM 1011 CA TYR 133 -16.371 96.058 2.173 1.00 0.00 C ATOM 1012 C TYR 133 -17.517 96.657 2.895 1.00 0.00 C ATOM 1013 O TYR 133 -17.806 97.831 2.744 1.00 0.00 O ATOM 1014 CB TYR 133 -16.981 95.662 0.832 1.00 0.00 C ATOM 1015 CG TYR 133 -16.041 94.794 0.065 1.00 0.00 C ATOM 1016 CD1 TYR 133 -14.659 94.745 0.348 1.00 0.00 C ATOM 1017 CD2 TYR 133 -16.588 93.974 -0.923 1.00 0.00 C ATOM 1018 CE1 TYR 133 -13.925 94.112 -0.612 1.00 0.00 C ATOM 1019 CE2 TYR 133 -15.829 92.930 -1.419 1.00 0.00 C ATOM 1020 CZ TYR 133 -14.466 93.039 -1.312 1.00 0.00 C ATOM 1021 OH TYR 133 -13.818 92.326 -2.250 1.00 0.00 H ATOM 1022 N GLN 134 -18.230 95.786 3.582 1.00 0.00 N ATOM 1023 CA GLN 134 -19.487 95.983 4.135 1.00 0.00 C ATOM 1024 C GLN 134 -19.536 97.107 5.100 1.00 0.00 C ATOM 1025 O GLN 134 -20.572 97.747 5.241 1.00 0.00 O ATOM 1026 CB GLN 134 -20.054 94.767 4.889 1.00 0.00 C ATOM 1027 CG GLN 134 -20.422 93.578 4.007 1.00 0.00 C ATOM 1028 CD GLN 134 -20.966 92.401 4.806 1.00 0.00 C ATOM 1029 OE1 GLN 134 -20.636 92.212 5.965 1.00 0.00 O ATOM 1030 NE2 GLN 134 -21.834 91.609 4.187 1.00 0.00 N ATOM 1031 N VAL 135 -18.354 97.323 5.665 1.00 0.00 N ATOM 1032 CA VAL 135 -18.042 98.476 6.392 1.00 0.00 C ATOM 1033 C VAL 135 -18.573 99.742 5.862 1.00 0.00 C ATOM 1034 O VAL 135 -19.233 100.499 6.576 1.00 0.00 O ATOM 1035 CB VAL 135 -16.563 98.600 6.830 1.00 0.00 C ATOM 1036 CG1 VAL 135 -16.316 99.884 7.672 1.00 0.00 C ATOM 1037 CG2 VAL 135 -16.108 97.378 7.637 1.00 0.00 C ATOM 1038 N VAL 136 -18.216 99.933 4.607 1.00 0.00 N ATOM 1039 CA VAL 136 -18.405 101.227 4.098 1.00 0.00 C ATOM 1040 C VAL 136 -19.850 101.648 4.002 1.00 0.00 C ATOM 1041 O VAL 136 -20.154 102.820 4.156 1.00 0.00 O ATOM 1042 CB VAL 136 -17.632 101.494 2.782 1.00 0.00 C ATOM 1043 CG1 VAL 136 -18.221 100.750 1.585 1.00 0.00 C ATOM 1044 CG2 VAL 136 -17.556 103.019 2.509 1.00 0.00 C ATOM 1045 N CYS 137 -20.689 100.668 3.646 1.00 0.00 N ATOM 1046 CA CYS 137 -21.660 100.943 2.638 1.00 0.00 C ATOM 1047 C CYS 137 -22.601 102.001 2.976 1.00 0.00 C ATOM 1048 O CYS 137 -22.550 103.035 2.305 1.00 0.00 O ATOM 1049 CB CYS 137 -22.419 99.663 2.188 1.00 0.00 C ATOM 1050 SG CYS 137 -23.648 100.008 0.858 1.00 0.00 S ATOM 1051 N LYS 138 -23.506 101.649 3.885 1.00 0.00 N ATOM 1052 CA LYS 138 -24.719 102.364 3.799 1.00 0.00 C ATOM 1053 C LYS 138 -24.497 103.751 4.234 1.00 0.00 C ATOM 1054 O LYS 138 -24.567 104.669 3.418 1.00 0.00 O ATOM 1055 CB LYS 138 -25.914 101.675 4.508 1.00 0.00 C ATOM 1056 CG LYS 138 -27.219 102.481 4.359 1.00 0.00 C ATOM 1057 CD LYS 138 -28.428 101.788 4.981 1.00 0.00 C ATOM 1058 CE LYS 138 -29.688 102.662 4.901 1.00 0.00 C ATOM 1059 NZ LYS 138 -30.840 101.976 5.513 1.00 0.00 N ATOM 1060 N GLY 139 -24.236 103.858 5.522 1.00 0.00 N ATOM 1061 CA GLY 139 -24.271 105.148 6.067 1.00 0.00 C ATOM 1062 C GLY 139 -25.683 105.633 6.128 1.00 0.00 C ATOM 1063 O GLY 139 -26.384 105.699 5.119 1.00 0.00 O ATOM 1064 N GLU 140 -26.150 105.871 7.329 1.00 0.00 N ATOM 1065 CA GLU 140 -27.561 105.929 7.479 1.00 0.00 C ATOM 1066 C GLU 140 -28.127 107.121 6.811 1.00 0.00 C ATOM 1067 O GLU 140 -27.534 108.194 6.741 1.00 0.00 O ATOM 1068 CB GLU 140 -27.867 106.165 8.960 1.00 0.00 C ATOM 1069 CG GLU 140 -27.551 104.970 9.868 1.00 0.00 C ATOM 1070 CD GLU 140 -27.938 105.220 11.327 1.00 0.00 C ATOM 1071 OE1 GLU 140 -28.383 106.340 11.626 1.00 0.00 O ATOM 1072 OE2 GLU 140 -27.790 104.245 12.090 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 85.30 29.5 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 83.78 35.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 88.80 15.4 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 99.31 28.2 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 99.74 27.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 95.38 26.9 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 106.74 30.8 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.77 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 73.04 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 78.98 43.8 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 84.73 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.42 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 74.26 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 57.02 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 106.16 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 102.82 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 102.82 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 121.28 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 47.95 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.46 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.46 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.2991 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 13.85 32 100.0 32 CRMSCA BURIED . . . . . . . . 12.44 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.51 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 13.93 156 100.0 156 CRMSMC BURIED . . . . . . . . 12.44 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 15.02 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 15.08 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 15.21 112 100.0 112 CRMSSC BURIED . . . . . . . . 14.62 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.19 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 14.48 240 100.0 240 CRMSALL BURIED . . . . . . . . 13.52 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.475 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 12.825 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 11.613 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.546 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 12.885 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 11.733 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.956 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 13.938 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 13.977 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 13.913 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.172 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 13.344 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 12.778 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 3 14 45 45 DISTCA CA (P) 0.00 2.22 4.44 6.67 31.11 45 DISTCA CA (RMS) 0.00 1.51 2.05 2.81 7.46 DISTCA ALL (N) 0 6 11 20 88 345 345 DISTALL ALL (P) 0.00 1.74 3.19 5.80 25.51 345 DISTALL ALL (RMS) 0.00 1.75 2.01 3.09 7.33 DISTALL END of the results output