####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS386_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS386_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.19 2.19 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.99 2.22 LONGEST_CONTINUOUS_SEGMENT: 44 97 - 140 1.98 2.21 LCS_AVERAGE: 97.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.95 2.30 LCS_AVERAGE: 44.15 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 44 45 3 3 4 16 24 32 35 39 42 42 43 44 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 4 44 45 3 3 4 6 11 29 39 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 4 44 45 3 3 4 6 9 28 34 40 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 14 44 45 9 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 14 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 14 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 14 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 14 44 45 6 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 14 44 45 6 18 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 14 44 45 6 18 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 14 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 14 44 45 6 18 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 14 44 45 11 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 14 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 14 44 45 9 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 14 44 45 3 5 7 23 35 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 14 44 45 8 23 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 7 44 45 3 9 13 25 31 38 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 44 45 4 21 33 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 44 45 8 23 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 44 45 8 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 44 45 8 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 44 45 4 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 44 45 10 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 44 45 4 6 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 44 45 4 19 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 44 45 4 25 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 44 45 7 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 44 45 7 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 44 45 7 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 44 45 9 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 44 45 9 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 44 45 9 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 44 45 10 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 44 45 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 44 45 11 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 44 45 9 25 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 44 45 4 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 44 45 3 3 3 3 18 22 29 30 41 42 44 44 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 80.64 ( 44.15 97.78 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 26 34 39 39 40 41 42 43 43 44 44 45 45 45 45 45 45 45 45 GDT PERCENT_AT 26.67 57.78 75.56 86.67 86.67 88.89 91.11 93.33 95.56 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.42 0.62 0.83 1.05 1.05 1.18 1.35 1.56 1.76 1.76 1.98 1.98 2.19 2.19 2.19 2.19 2.19 2.19 2.19 2.19 GDT RMS_ALL_AT 2.32 2.34 2.34 2.28 2.28 2.26 2.24 2.21 2.22 2.22 2.21 2.21 2.19 2.19 2.19 2.19 2.19 2.19 2.19 2.19 # Checking swapping # possible swapping detected: E 113 E 113 # possible swapping detected: E 121 E 121 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 6.252 0 0.668 0.722 8.696 29.405 22.109 LGA A 97 A 97 5.057 0 0.074 0.112 7.687 22.976 19.810 LGA R 98 R 98 5.851 0 0.257 0.355 18.682 29.048 10.823 LGA G 99 G 99 0.216 0 0.291 0.291 1.549 93.214 93.214 LGA W 100 W 100 0.418 0 0.150 0.196 2.821 92.976 77.687 LGA E 101 E 101 0.806 0 0.062 0.163 1.176 88.214 89.471 LGA C 102 C 102 0.903 0 0.074 0.175 1.136 90.476 87.460 LGA T 103 T 103 1.363 0 0.009 0.963 3.956 79.286 74.830 LGA K 104 K 104 1.796 0 0.053 0.645 4.394 72.857 62.910 LGA D 105 D 105 1.915 0 0.158 0.933 5.287 70.833 57.143 LGA R 106 R 106 0.785 0 0.129 1.135 5.230 88.214 68.788 LGA C 107 C 107 1.576 0 0.026 0.734 4.416 79.286 69.841 LGA G 108 G 108 0.938 0 0.052 0.052 1.201 88.214 88.214 LGA E 109 E 109 1.120 0 0.050 0.602 4.380 81.429 66.296 LGA V 110 V 110 1.334 0 0.679 1.465 4.587 69.762 64.014 LGA R 111 R 111 3.195 0 0.083 1.320 15.323 57.381 24.156 LGA N 112 N 112 0.891 0 0.090 1.296 6.712 81.548 56.786 LGA E 113 E 113 4.114 0 0.168 1.286 10.593 46.786 24.339 LGA E 114 E 114 1.329 0 0.465 0.741 5.643 75.119 53.968 LGA N 115 N 115 0.825 0 0.054 1.121 2.408 92.857 85.238 LGA A 116 A 116 0.758 0 0.058 0.084 1.069 92.857 90.571 LGA C 117 C 117 0.290 0 0.072 0.219 1.449 100.000 95.317 LGA H 118 H 118 0.773 0 0.113 1.070 2.545 88.214 81.810 LGA C 119 C 119 0.637 0 0.198 0.841 2.006 88.214 83.175 LGA S 120 S 120 0.555 0 0.031 0.067 0.939 92.857 92.063 LGA E 121 E 121 1.126 0 0.110 0.667 2.692 85.952 78.836 LGA D 122 D 122 0.275 0 0.220 1.124 3.914 95.238 83.750 LGA C 123 C 123 0.270 0 0.071 0.143 1.056 92.976 92.143 LGA L 124 L 124 1.751 0 0.055 1.467 4.645 71.310 68.095 LGA S 125 S 125 2.245 0 0.196 0.552 3.486 63.095 61.190 LGA R 126 R 126 1.961 0 0.166 0.576 2.577 68.929 76.970 LGA G 127 G 127 1.065 0 0.092 0.092 1.140 81.429 81.429 LGA D 128 D 128 1.181 0 0.157 1.187 2.909 81.429 76.310 LGA C 129 C 129 0.930 0 0.037 0.587 2.710 90.476 84.921 LGA C 130 C 130 0.459 0 0.050 0.733 2.814 95.238 89.683 LGA T 131 T 131 0.935 0 0.138 1.100 3.226 92.857 83.469 LGA N 132 N 132 1.267 0 0.088 1.165 3.343 88.214 79.821 LGA Y 133 Y 133 0.566 0 0.058 0.443 1.220 90.476 87.460 LGA Q 134 Q 134 1.281 0 0.067 0.686 5.987 81.429 56.614 LGA V 135 V 135 1.062 0 0.033 0.088 1.745 85.952 82.789 LGA V 136 V 136 0.421 0 0.077 1.141 2.737 95.238 85.918 LGA C 137 C 137 0.687 0 0.122 0.762 3.406 90.476 83.730 LGA K 138 K 138 1.353 0 0.168 0.266 4.005 85.952 67.037 LGA G 139 G 139 1.288 0 0.682 0.682 4.995 61.071 61.071 LGA E 140 E 140 6.699 0 0.205 1.126 8.733 15.000 11.005 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.192 2.177 3.841 77.884 69.606 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.56 84.444 90.361 2.532 LGA_LOCAL RMSD: 1.559 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.212 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.192 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.286205 * X + -0.812593 * Y + -0.507721 * Z + 159.510269 Y_new = 0.376337 * X + 0.391971 * Y + -0.839481 * Z + 118.054092 Z_new = 0.881168 * X + -0.431338 * Y + 0.193625 * Z + -62.989288 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.220984 -1.078327 -1.148862 [DEG: 127.2530 -61.7836 -65.8249 ] ZXZ: -0.543943 1.375940 2.026014 [DEG: -31.1657 78.8356 116.0821 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS386_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS386_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.56 90.361 2.19 REMARK ---------------------------------------------------------- MOLECULE T0543TS386_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 16.999 90.729 20.495 1.00 0.00 N ATOM 729 CA THR 96 15.604 90.798 20.209 1.00 0.00 C ATOM 730 CB THR 96 15.600 90.976 18.743 1.00 0.00 C ATOM 731 OG1 THR 96 16.551 91.987 18.476 1.00 0.00 O ATOM 732 CG2 THR 96 14.215 91.273 18.147 1.00 0.00 C ATOM 733 C THR 96 15.155 89.384 20.404 1.00 0.00 C ATOM 734 O THR 96 15.640 88.493 19.711 1.00 0.00 O ATOM 735 N ALA 97 14.163 89.116 21.268 1.00 0.00 N ATOM 736 CA ALA 97 14.114 87.728 21.615 1.00 0.00 C ATOM 737 CB ALA 97 13.868 87.496 23.115 1.00 0.00 C ATOM 738 C ALA 97 13.096 86.906 20.884 1.00 0.00 C ATOM 739 O ALA 97 11.894 87.088 21.038 1.00 0.00 O ATOM 740 N ARG 98 13.613 85.925 20.114 1.00 0.00 N ATOM 741 CA ARG 98 12.929 84.823 19.493 1.00 0.00 C ATOM 742 CB ARG 98 12.496 83.756 20.518 1.00 0.00 C ATOM 743 CG ARG 98 13.671 83.064 21.215 1.00 0.00 C ATOM 744 CD ARG 98 13.264 82.206 22.416 1.00 0.00 C ATOM 745 NE ARG 98 12.579 80.985 21.906 1.00 0.00 N ATOM 746 CZ ARG 98 12.417 79.908 22.730 1.00 0.00 C ATOM 747 NH1 ARG 98 12.895 79.948 24.008 1.00 0.00 H ATOM 748 NH2 ARG 98 11.778 78.789 22.279 1.00 0.00 H ATOM 749 C ARG 98 11.727 85.150 18.661 1.00 0.00 C ATOM 750 O ARG 98 10.659 84.611 18.939 1.00 0.00 O ATOM 751 N GLY 99 11.847 86.016 17.629 1.00 0.00 N ATOM 752 CA GLY 99 10.741 86.207 16.730 1.00 0.00 C ATOM 753 C GLY 99 10.679 85.002 15.832 1.00 0.00 C ATOM 754 O GLY 99 11.591 84.729 15.051 1.00 0.00 O ATOM 755 N TRP 100 9.582 84.237 15.960 1.00 0.00 N ATOM 756 CA TRP 100 9.272 83.047 15.216 1.00 0.00 C ATOM 757 CB TRP 100 8.173 82.220 15.899 1.00 0.00 C ATOM 758 CG TRP 100 8.533 81.793 17.301 1.00 0.00 C ATOM 759 CD2 TRP 100 9.384 80.683 17.628 1.00 0.00 C ATOM 760 CD1 TRP 100 8.166 82.359 18.487 1.00 0.00 C ATOM 761 NE1 TRP 100 8.731 81.671 19.532 1.00 0.00 N ATOM 762 CE2 TRP 100 9.484 80.637 19.018 1.00 0.00 C ATOM 763 CE3 TRP 100 10.030 79.779 16.835 1.00 0.00 C ATOM 764 CZ2 TRP 100 10.236 79.681 19.639 1.00 0.00 C ATOM 765 CZ3 TRP 100 10.786 78.815 17.465 1.00 0.00 C ATOM 766 CH2 TRP 100 10.886 78.768 18.839 1.00 0.00 H ATOM 767 C TRP 100 8.763 83.407 13.851 1.00 0.00 C ATOM 768 O TRP 100 8.745 82.568 12.953 1.00 0.00 O ATOM 769 N GLU 101 8.279 84.652 13.671 1.00 0.00 N ATOM 770 CA GLU 101 7.519 84.954 12.487 1.00 0.00 C ATOM 771 CB GLU 101 6.151 85.526 12.862 1.00 0.00 C ATOM 772 CG GLU 101 5.390 84.496 13.697 1.00 0.00 C ATOM 773 CD GLU 101 4.034 85.050 14.073 1.00 0.00 C ATOM 774 OE1 GLU 101 3.674 86.142 13.561 1.00 0.00 O ATOM 775 OE2 GLU 101 3.338 84.381 14.883 1.00 0.00 O ATOM 776 C GLU 101 8.212 85.875 11.527 1.00 0.00 C ATOM 777 O GLU 101 9.078 86.668 11.890 1.00 0.00 O ATOM 778 N CYS 102 7.813 85.770 10.236 1.00 0.00 N ATOM 779 CA CYS 102 8.404 86.512 9.157 1.00 0.00 C ATOM 780 CB CYS 102 8.678 85.631 7.925 1.00 0.00 C ATOM 781 SG CYS 102 9.746 84.218 8.334 1.00 0.00 S ATOM 782 C CYS 102 7.471 87.609 8.726 1.00 0.00 C ATOM 783 O CYS 102 6.308 87.658 9.123 1.00 0.00 O ATOM 784 N THR 103 7.998 88.551 7.913 1.00 0.00 N ATOM 785 CA THR 103 7.239 89.640 7.356 1.00 0.00 C ATOM 786 CB THR 103 7.720 90.990 7.809 1.00 0.00 C ATOM 787 OG1 THR 103 7.573 91.109 9.215 1.00 0.00 O ATOM 788 CG2 THR 103 6.914 92.090 7.101 1.00 0.00 C ATOM 789 C THR 103 7.402 89.562 5.865 1.00 0.00 C ATOM 790 O THR 103 8.375 89.001 5.367 1.00 0.00 O ATOM 791 N LYS 104 6.448 90.144 5.107 1.00 0.00 N ATOM 792 CA LYS 104 6.482 90.058 3.672 1.00 0.00 C ATOM 793 CB LYS 104 5.315 90.791 2.979 1.00 0.00 C ATOM 794 CG LYS 104 3.955 90.131 3.226 1.00 0.00 C ATOM 795 CD LYS 104 2.757 90.937 2.717 1.00 0.00 C ATOM 796 CE LYS 104 1.888 90.177 1.710 1.00 0.00 C ATOM 797 NZ LYS 104 2.606 90.015 0.427 1.00 0.00 N ATOM 798 C LYS 104 7.758 90.668 3.213 1.00 0.00 C ATOM 799 O LYS 104 8.377 90.199 2.258 1.00 0.00 O ATOM 800 N ASP 105 8.180 91.736 3.905 1.00 0.00 N ATOM 801 CA ASP 105 9.378 92.449 3.588 1.00 0.00 C ATOM 802 CB ASP 105 9.586 93.609 4.571 1.00 0.00 C ATOM 803 CG ASP 105 10.758 94.426 4.083 1.00 0.00 C ATOM 804 OD1 ASP 105 11.308 94.073 3.006 1.00 0.00 O ATOM 805 OD2 ASP 105 11.121 95.409 4.779 1.00 0.00 O ATOM 806 C ASP 105 10.542 91.516 3.725 1.00 0.00 C ATOM 807 O ASP 105 11.440 91.505 2.885 1.00 0.00 O ATOM 808 N ARG 106 10.545 90.696 4.792 1.00 0.00 N ATOM 809 CA ARG 106 11.628 89.793 5.060 1.00 0.00 C ATOM 810 CB ARG 106 11.509 89.100 6.429 1.00 0.00 C ATOM 811 CG ARG 106 12.009 89.955 7.592 1.00 0.00 C ATOM 812 CD ARG 106 13.458 89.627 7.953 1.00 0.00 C ATOM 813 NE ARG 106 13.895 90.518 9.064 1.00 0.00 N ATOM 814 CZ ARG 106 15.179 90.429 9.521 1.00 0.00 C ATOM 815 NH1 ARG 106 16.030 89.517 8.969 1.00 0.00 H ATOM 816 NH2 ARG 106 15.616 91.249 10.522 1.00 0.00 H ATOM 817 C ARG 106 11.716 88.735 4.004 1.00 0.00 C ATOM 818 O ARG 106 12.809 88.254 3.705 1.00 0.00 O ATOM 819 N CYS 107 10.581 88.314 3.414 1.00 0.00 N ATOM 820 CA CYS 107 10.697 87.232 2.478 1.00 0.00 C ATOM 821 CB CYS 107 9.360 86.703 1.916 1.00 0.00 C ATOM 822 SG CYS 107 9.606 85.197 0.922 1.00 0.00 S ATOM 823 C CYS 107 11.543 87.676 1.329 1.00 0.00 C ATOM 824 O CYS 107 11.340 88.752 0.769 1.00 0.00 O ATOM 825 N GLY 108 12.514 86.820 0.946 1.00 0.00 N ATOM 826 CA GLY 108 13.395 87.118 -0.148 1.00 0.00 C ATOM 827 C GLY 108 14.646 87.779 0.357 1.00 0.00 C ATOM 828 O GLY 108 15.442 88.275 -0.438 1.00 0.00 O ATOM 829 N GLU 109 14.860 87.808 1.688 1.00 0.00 N ATOM 830 CA GLU 109 16.022 88.466 2.219 1.00 0.00 C ATOM 831 CB GLU 109 15.832 88.957 3.665 1.00 0.00 C ATOM 832 CG GLU 109 16.929 89.913 4.132 1.00 0.00 C ATOM 833 CD GLU 109 16.458 90.572 5.420 1.00 0.00 C ATOM 834 OE1 GLU 109 15.499 91.388 5.342 1.00 0.00 O ATOM 835 OE2 GLU 109 17.042 90.276 6.495 1.00 0.00 O ATOM 836 C GLU 109 17.219 87.555 2.169 1.00 0.00 C ATOM 837 O GLU 109 17.128 86.350 2.399 1.00 0.00 O ATOM 838 N VAL 110 18.364 88.146 1.773 1.00 0.00 N ATOM 839 CA VAL 110 19.679 87.579 1.631 1.00 0.00 C ATOM 840 CB VAL 110 20.532 88.365 0.681 1.00 0.00 C ATOM 841 CG1 VAL 110 19.924 88.270 -0.728 1.00 0.00 C ATOM 842 CG2 VAL 110 20.637 89.805 1.207 1.00 0.00 C ATOM 843 C VAL 110 20.459 87.459 2.915 1.00 0.00 C ATOM 844 O VAL 110 21.425 86.695 2.973 1.00 0.00 O ATOM 845 N ARG 111 20.149 88.262 3.954 1.00 0.00 N ATOM 846 CA ARG 111 21.042 88.247 5.082 1.00 0.00 C ATOM 847 CB ARG 111 21.878 89.540 5.097 1.00 0.00 C ATOM 848 CG ARG 111 22.953 89.680 6.173 1.00 0.00 C ATOM 849 CD ARG 111 24.007 90.710 5.754 1.00 0.00 C ATOM 850 NE ARG 111 24.797 91.111 6.949 1.00 0.00 N ATOM 851 CZ ARG 111 24.760 92.415 7.348 1.00 0.00 C ATOM 852 NH1 ARG 111 24.013 93.314 6.643 1.00 0.00 H ATOM 853 NH2 ARG 111 25.471 92.824 8.438 1.00 0.00 H ATOM 854 C ARG 111 20.278 88.101 6.368 1.00 0.00 C ATOM 855 O ARG 111 19.177 88.631 6.510 1.00 0.00 O ATOM 856 N ASN 112 20.840 87.332 7.336 1.00 0.00 N ATOM 857 CA ASN 112 20.169 87.152 8.595 1.00 0.00 C ATOM 858 CB ASN 112 19.324 85.868 8.631 1.00 0.00 C ATOM 859 CG ASN 112 18.214 86.002 7.596 1.00 0.00 C ATOM 860 OD1 ASN 112 17.310 86.827 7.727 1.00 0.00 O ATOM 861 ND2 ASN 112 18.286 85.169 6.524 1.00 0.00 N ATOM 862 C ASN 112 21.188 87.034 9.696 1.00 0.00 C ATOM 863 O ASN 112 21.786 85.976 9.884 1.00 0.00 O ATOM 864 N GLU 113 21.405 88.116 10.471 1.00 0.00 N ATOM 865 CA GLU 113 22.402 88.080 11.504 1.00 0.00 C ATOM 866 CB GLU 113 22.712 89.478 12.066 1.00 0.00 C ATOM 867 CG GLU 113 23.544 90.356 11.126 1.00 0.00 C ATOM 868 CD GLU 113 22.720 90.692 9.891 1.00 0.00 C ATOM 869 OE1 GLU 113 22.675 89.841 8.963 1.00 0.00 O ATOM 870 OE2 GLU 113 22.130 91.804 9.854 1.00 0.00 O ATOM 871 C GLU 113 22.001 87.213 12.662 1.00 0.00 C ATOM 872 O GLU 113 22.755 86.330 13.069 1.00 0.00 O ATOM 873 N GLU 114 20.801 87.435 13.241 1.00 0.00 N ATOM 874 CA GLU 114 20.431 86.612 14.358 1.00 0.00 C ATOM 875 CB GLU 114 20.807 87.249 15.710 1.00 0.00 C ATOM 876 CG GLU 114 20.550 86.356 16.926 1.00 0.00 C ATOM 877 CD GLU 114 21.074 87.076 18.161 1.00 0.00 C ATOM 878 OE1 GLU 114 20.629 88.228 18.415 1.00 0.00 O ATOM 879 OE2 GLU 114 21.932 86.479 18.864 1.00 0.00 O ATOM 880 C GLU 114 18.947 86.474 14.324 1.00 0.00 C ATOM 881 O GLU 114 18.239 87.199 15.016 1.00 0.00 O ATOM 882 N ASN 115 18.439 85.507 13.543 1.00 0.00 N ATOM 883 CA ASN 115 17.023 85.317 13.428 1.00 0.00 C ATOM 884 CB ASN 115 16.509 85.475 11.988 1.00 0.00 C ATOM 885 CG ASN 115 16.864 86.868 11.491 1.00 0.00 C ATOM 886 OD1 ASN 115 17.551 87.014 10.481 1.00 0.00 O ATOM 887 ND2 ASN 115 16.391 87.920 12.207 1.00 0.00 N ATOM 888 C ASN 115 16.745 83.901 13.809 1.00 0.00 C ATOM 889 O ASN 115 17.515 82.996 13.490 1.00 0.00 O ATOM 890 N ALA 116 15.643 83.689 14.551 1.00 0.00 N ATOM 891 CA ALA 116 15.212 82.373 14.928 1.00 0.00 C ATOM 892 CB ALA 116 14.018 82.391 15.898 1.00 0.00 C ATOM 893 C ALA 116 14.776 81.642 13.696 1.00 0.00 C ATOM 894 O ALA 116 14.992 80.440 13.575 1.00 0.00 O ATOM 895 N CYS 117 14.114 82.344 12.757 1.00 0.00 N ATOM 896 CA CYS 117 13.625 81.701 11.567 1.00 0.00 C ATOM 897 CB CYS 117 12.090 81.696 11.458 1.00 0.00 C ATOM 898 SG CYS 117 11.397 83.372 11.320 1.00 0.00 S ATOM 899 C CYS 117 14.145 82.462 10.389 1.00 0.00 C ATOM 900 O CYS 117 14.467 83.644 10.502 1.00 0.00 O ATOM 901 N HIS 118 14.231 81.791 9.219 1.00 0.00 N ATOM 902 CA HIS 118 14.787 82.410 8.049 1.00 0.00 C ATOM 903 ND1 HIS 118 18.172 82.182 8.381 1.00 0.00 N ATOM 904 CG HIS 118 17.041 81.397 8.371 1.00 0.00 C ATOM 905 CB HIS 118 15.900 81.567 7.414 1.00 0.00 C ATOM 906 NE2 HIS 118 18.389 80.732 10.053 1.00 0.00 N ATOM 907 CD2 HIS 118 17.191 80.516 9.397 1.00 0.00 C ATOM 908 CE1 HIS 118 18.943 81.742 9.407 1.00 0.00 C ATOM 909 C HIS 118 13.697 82.622 7.049 1.00 0.00 C ATOM 910 O HIS 118 12.923 81.724 6.722 1.00 0.00 O ATOM 911 N CYS 119 13.593 83.879 6.597 1.00 0.00 N ATOM 912 CA CYS 119 12.584 84.375 5.716 1.00 0.00 C ATOM 913 CB CYS 119 12.360 85.875 5.916 1.00 0.00 C ATOM 914 SG CYS 119 10.642 86.290 5.545 1.00 0.00 S ATOM 915 C CYS 119 12.829 84.083 4.253 1.00 0.00 C ATOM 916 O CYS 119 11.925 84.246 3.435 1.00 0.00 O ATOM 917 N SER 120 14.070 83.715 3.876 1.00 0.00 N ATOM 918 CA SER 120 14.487 83.607 2.493 1.00 0.00 C ATOM 919 CB SER 120 16.011 83.734 2.336 1.00 0.00 C ATOM 920 OG SER 120 16.662 82.756 3.132 1.00 0.00 O ATOM 921 C SER 120 14.050 82.347 1.803 1.00 0.00 C ATOM 922 O SER 120 13.675 81.358 2.420 1.00 0.00 O ATOM 923 N GLU 121 14.126 82.355 0.454 1.00 0.00 N ATOM 924 CA GLU 121 13.724 81.249 -0.373 1.00 0.00 C ATOM 925 CB GLU 121 13.845 81.533 -1.883 1.00 0.00 C ATOM 926 CG GLU 121 12.808 82.533 -2.410 1.00 0.00 C ATOM 927 CD GLU 121 11.453 81.836 -2.528 1.00 0.00 C ATOM 928 OE1 GLU 121 10.847 81.522 -1.468 1.00 0.00 O ATOM 929 OE2 GLU 121 11.005 81.609 -3.684 1.00 0.00 O ATOM 930 C GLU 121 14.590 80.077 -0.041 1.00 0.00 C ATOM 931 O GLU 121 14.159 78.929 -0.133 1.00 0.00 O ATOM 932 N ASP 122 15.845 80.342 0.361 1.00 0.00 N ATOM 933 CA ASP 122 16.755 79.282 0.680 1.00 0.00 C ATOM 934 CB ASP 122 18.115 79.771 1.206 1.00 0.00 C ATOM 935 CG ASP 122 18.924 80.359 0.061 1.00 0.00 C ATOM 936 OD1 ASP 122 18.362 80.519 -1.056 1.00 0.00 O ATOM 937 OD2 ASP 122 20.125 80.656 0.296 1.00 0.00 O ATOM 938 C ASP 122 16.158 78.467 1.781 1.00 0.00 C ATOM 939 O ASP 122 16.287 77.244 1.791 1.00 0.00 O ATOM 940 N CYS 123 15.471 79.120 2.735 1.00 0.00 N ATOM 941 CA CYS 123 14.942 78.402 3.855 1.00 0.00 C ATOM 942 CB CYS 123 14.275 79.277 4.932 1.00 0.00 C ATOM 943 SG CYS 123 12.590 79.795 4.521 1.00 0.00 S ATOM 944 C CYS 123 13.938 77.419 3.347 1.00 0.00 C ATOM 945 O CYS 123 13.737 76.369 3.951 1.00 0.00 O ATOM 946 N LEU 124 13.252 77.739 2.234 1.00 0.00 N ATOM 947 CA LEU 124 12.281 76.824 1.701 1.00 0.00 C ATOM 948 CB LEU 124 11.516 77.397 0.497 1.00 0.00 C ATOM 949 CG LEU 124 10.473 76.426 -0.086 1.00 0.00 C ATOM 950 CD1 LEU 124 9.375 76.104 0.943 1.00 0.00 C ATOM 951 CD2 LEU 124 9.906 76.948 -1.414 1.00 0.00 C ATOM 952 C LEU 124 12.963 75.565 1.254 1.00 0.00 C ATOM 953 O LEU 124 12.467 74.464 1.491 1.00 0.00 O ATOM 954 N SER 125 14.125 75.684 0.585 1.00 0.00 N ATOM 955 CA SER 125 14.781 74.501 0.111 1.00 0.00 C ATOM 956 CB SER 125 16.029 74.810 -0.734 1.00 0.00 C ATOM 957 OG SER 125 16.634 73.602 -1.171 1.00 0.00 O ATOM 958 C SER 125 15.223 73.675 1.287 1.00 0.00 C ATOM 959 O SER 125 14.968 72.472 1.337 1.00 0.00 O ATOM 960 N ARG 126 15.900 74.319 2.258 1.00 0.00 N ATOM 961 CA ARG 126 16.473 73.677 3.413 1.00 0.00 C ATOM 962 CB ARG 126 17.371 74.621 4.220 1.00 0.00 C ATOM 963 CG ARG 126 18.521 75.192 3.395 1.00 0.00 C ATOM 964 CD ARG 126 19.499 76.035 4.211 1.00 0.00 C ATOM 965 NE ARG 126 20.458 76.639 3.247 1.00 0.00 N ATOM 966 CZ ARG 126 21.740 76.903 3.633 1.00 0.00 C ATOM 967 NH1 ARG 126 22.164 76.564 4.885 1.00 0.00 H ATOM 968 NH2 ARG 126 22.598 77.504 2.760 1.00 0.00 H ATOM 969 C ARG 126 15.427 73.152 4.358 1.00 0.00 C ATOM 970 O ARG 126 15.572 72.047 4.880 1.00 0.00 O ATOM 971 N GLY 127 14.330 73.906 4.582 1.00 0.00 N ATOM 972 CA GLY 127 13.343 73.511 5.555 1.00 0.00 C ATOM 973 C GLY 127 13.440 74.379 6.793 1.00 0.00 C ATOM 974 O GLY 127 12.947 73.999 7.855 1.00 0.00 O ATOM 975 N ASP 128 14.143 75.529 6.677 1.00 0.00 N ATOM 976 CA ASP 128 14.386 76.581 7.645 1.00 0.00 C ATOM 977 CB ASP 128 15.554 77.506 7.244 1.00 0.00 C ATOM 978 CG ASP 128 16.896 76.794 7.346 1.00 0.00 C ATOM 979 OD1 ASP 128 16.924 75.597 7.736 1.00 0.00 O ATOM 980 OD2 ASP 128 17.921 77.456 7.034 1.00 0.00 O ATOM 981 C ASP 128 13.215 77.525 7.828 1.00 0.00 C ATOM 982 O ASP 128 13.229 78.336 8.752 1.00 0.00 O ATOM 983 N CYS 129 12.212 77.529 6.928 1.00 0.00 N ATOM 984 CA CYS 129 11.187 78.547 6.948 1.00 0.00 C ATOM 985 CB CYS 129 10.166 78.429 5.797 1.00 0.00 C ATOM 986 SG CYS 129 9.358 76.810 5.684 1.00 0.00 S ATOM 987 C CYS 129 10.425 78.644 8.237 1.00 0.00 C ATOM 988 O CYS 129 10.190 77.668 8.947 1.00 0.00 O ATOM 989 N CYS 130 10.018 79.893 8.557 1.00 0.00 N ATOM 990 CA CYS 130 9.261 80.212 9.732 1.00 0.00 C ATOM 991 CB CYS 130 9.165 81.731 9.991 1.00 0.00 C ATOM 992 SG CYS 130 8.438 82.685 8.624 1.00 0.00 S ATOM 993 C CYS 130 7.887 79.638 9.559 1.00 0.00 C ATOM 994 O CYS 130 7.487 79.296 8.449 1.00 0.00 O ATOM 995 N THR 131 7.136 79.478 10.669 1.00 0.00 N ATOM 996 CA THR 131 5.826 78.889 10.596 1.00 0.00 C ATOM 997 CB THR 131 5.165 78.774 11.939 1.00 0.00 C ATOM 998 OG1 THR 131 5.960 77.984 12.810 1.00 0.00 O ATOM 999 CG2 THR 131 3.782 78.128 11.753 1.00 0.00 C ATOM 1000 C THR 131 4.952 79.766 9.745 1.00 0.00 C ATOM 1001 O THR 131 4.205 79.282 8.896 1.00 0.00 O ATOM 1002 N ASN 132 5.056 81.087 9.970 1.00 0.00 N ATOM 1003 CA ASN 132 4.339 82.176 9.358 1.00 0.00 C ATOM 1004 CB ASN 132 4.577 83.503 10.107 1.00 0.00 C ATOM 1005 CG ASN 132 3.538 84.543 9.700 1.00 0.00 C ATOM 1006 OD1 ASN 132 2.637 84.283 8.906 1.00 0.00 O ATOM 1007 ND2 ASN 132 3.669 85.771 10.268 1.00 0.00 N ATOM 1008 C ASN 132 4.797 82.369 7.942 1.00 0.00 C ATOM 1009 O ASN 132 4.204 83.146 7.199 1.00 0.00 O ATOM 1010 N TYR 133 5.893 81.702 7.540 1.00 0.00 N ATOM 1011 CA TYR 133 6.524 81.925 6.267 1.00 0.00 C ATOM 1012 CB TYR 133 7.633 80.883 6.032 1.00 0.00 C ATOM 1013 CG TYR 133 8.257 81.097 4.702 1.00 0.00 C ATOM 1014 CD1 TYR 133 9.267 82.016 4.542 1.00 0.00 C ATOM 1015 CD2 TYR 133 7.839 80.363 3.616 1.00 0.00 C ATOM 1016 CE1 TYR 133 9.847 82.205 3.311 1.00 0.00 C ATOM 1017 CE2 TYR 133 8.414 80.548 2.383 1.00 0.00 C ATOM 1018 CZ TYR 133 9.419 81.471 2.232 1.00 0.00 C ATOM 1019 OH TYR 133 10.012 81.664 0.968 1.00 0.00 H ATOM 1020 C TYR 133 5.540 81.800 5.137 1.00 0.00 C ATOM 1021 O TYR 133 5.485 82.679 4.278 1.00 0.00 O ATOM 1022 N GLN 134 4.733 80.725 5.098 1.00 0.00 N ATOM 1023 CA GLN 134 3.819 80.544 4.004 1.00 0.00 C ATOM 1024 CB GLN 134 3.109 79.178 4.022 1.00 0.00 C ATOM 1025 CG GLN 134 2.185 78.982 5.225 1.00 0.00 C ATOM 1026 CD GLN 134 1.468 77.648 5.062 1.00 0.00 C ATOM 1027 OE1 GLN 134 0.241 77.600 4.994 1.00 0.00 O ATOM 1028 NE2 GLN 134 2.247 76.536 5.000 1.00 0.00 N ATOM 1029 C GLN 134 2.758 81.602 4.027 1.00 0.00 C ATOM 1030 O GLN 134 2.382 82.146 2.991 1.00 0.00 O ATOM 1031 N VAL 135 2.236 81.938 5.217 1.00 0.00 N ATOM 1032 CA VAL 135 1.163 82.882 5.258 1.00 0.00 C ATOM 1033 CB VAL 135 0.699 83.160 6.658 1.00 0.00 C ATOM 1034 CG1 VAL 135 -0.390 84.245 6.611 1.00 0.00 C ATOM 1035 CG2 VAL 135 0.239 81.839 7.297 1.00 0.00 C ATOM 1036 C VAL 135 1.630 84.182 4.681 1.00 0.00 C ATOM 1037 O VAL 135 0.975 84.748 3.807 1.00 0.00 O ATOM 1038 N VAL 136 2.766 84.707 5.180 1.00 0.00 N ATOM 1039 CA VAL 136 3.226 85.991 4.731 1.00 0.00 C ATOM 1040 CB VAL 136 4.247 86.619 5.646 1.00 0.00 C ATOM 1041 CG1 VAL 136 3.575 86.915 6.995 1.00 0.00 C ATOM 1042 CG2 VAL 136 5.472 85.699 5.768 1.00 0.00 C ATOM 1043 C VAL 136 3.806 85.967 3.349 1.00 0.00 C ATOM 1044 O VAL 136 3.410 86.764 2.503 1.00 0.00 O ATOM 1045 N CYS 137 4.799 85.087 3.095 1.00 0.00 N ATOM 1046 CA CYS 137 5.456 85.059 1.817 1.00 0.00 C ATOM 1047 CB CYS 137 6.827 84.362 1.844 1.00 0.00 C ATOM 1048 SG CYS 137 7.745 84.655 0.304 1.00 0.00 S ATOM 1049 C CYS 137 4.612 84.420 0.756 1.00 0.00 C ATOM 1050 O CYS 137 4.546 84.905 -0.372 1.00 0.00 O ATOM 1051 N LYS 138 3.964 83.291 1.092 1.00 0.00 N ATOM 1052 CA LYS 138 3.179 82.526 0.165 1.00 0.00 C ATOM 1053 CB LYS 138 2.966 81.054 0.558 1.00 0.00 C ATOM 1054 CG LYS 138 4.283 80.276 0.504 1.00 0.00 C ATOM 1055 CD LYS 138 4.978 80.381 -0.859 1.00 0.00 C ATOM 1056 CE LYS 138 6.406 79.829 -0.885 1.00 0.00 C ATOM 1057 NZ LYS 138 7.054 80.149 -2.179 1.00 0.00 N ATOM 1058 C LYS 138 1.886 83.181 -0.155 1.00 0.00 C ATOM 1059 O LYS 138 1.255 82.776 -1.125 1.00 0.00 O ATOM 1060 N GLY 139 1.409 84.134 0.672 1.00 0.00 N ATOM 1061 CA GLY 139 0.180 84.797 0.329 1.00 0.00 C ATOM 1062 C GLY 139 0.407 85.376 -1.035 1.00 0.00 C ATOM 1063 O GLY 139 1.465 85.944 -1.302 1.00 0.00 O ATOM 1064 N GLU 140 -0.595 85.254 -1.934 1.00 0.00 N ATOM 1065 CA GLU 140 -0.391 85.637 -3.303 1.00 0.00 C ATOM 1066 CB GLU 140 -1.092 84.699 -4.302 1.00 0.00 C ATOM 1067 CG GLU 140 -0.505 83.287 -4.350 1.00 0.00 C ATOM 1068 CD GLU 140 0.799 83.342 -5.134 1.00 0.00 C ATOM 1069 OE1 GLU 140 1.456 84.417 -5.118 1.00 0.00 O ATOM 1070 OE2 GLU 140 1.158 82.309 -5.758 1.00 0.00 O ATOM 1071 C GLU 140 -0.937 87.003 -3.541 1.00 0.00 C ATOM 1072 O GLU 140 -2.124 87.260 -3.345 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 44.37 67.0 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 49.70 62.9 62 100.0 62 ARMSMC BURIED . . . . . . . . 27.80 76.9 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.17 46.2 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 83.70 47.2 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 92.97 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 66.87 69.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.30 56.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 50.96 66.7 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 57.46 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 90.73 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.11 38.5 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 69.25 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 49.52 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 114.58 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 49.08 83.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 49.08 83.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 59.42 75.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 12.84 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.19 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.19 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0487 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.49 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.16 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.36 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.68 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.29 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.09 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.27 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.32 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.57 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.86 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.06 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.34 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.613 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 1.886 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 0.939 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.736 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 2.041 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 1.004 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.619 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 3.704 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 3.929 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 2.964 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.583 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.856 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 1.959 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 21 36 39 42 45 45 45 DISTCA CA (P) 46.67 80.00 86.67 93.33 100.00 45 DISTCA CA (RMS) 0.74 1.08 1.19 1.59 2.19 DISTCA ALL (N) 95 216 258 299 334 345 345 DISTALL ALL (P) 27.54 62.61 74.78 86.67 96.81 345 DISTALL ALL (RMS) 0.74 1.18 1.45 2.00 2.91 DISTALL END of the results output