####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 385), selected 43 , name T0543TS365_1_1 # Molecule2: number of CA atoms 784 ( 6318), selected 43 , name T0543.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS365_1_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 56 - 98 2.86 2.86 LCS_AVERAGE: 5.48 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 69 - 93 1.97 3.54 LONGEST_CONTINUOUS_SEGMENT: 25 70 - 94 1.90 3.39 LONGEST_CONTINUOUS_SEGMENT: 25 71 - 95 1.64 3.10 LCS_AVERAGE: 2.49 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.90 4.74 LONGEST_CONTINUOUS_SEGMENT: 14 80 - 93 0.96 2.98 LCS_AVERAGE: 1.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 43 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 7 12 43 7 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT S 57 S 57 7 12 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 58 C 58 7 12 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT K 59 K 59 7 12 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT G 60 G 60 7 12 43 8 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT R 61 R 61 7 12 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 62 C 62 7 12 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT F 63 F 63 4 12 43 3 4 5 19 31 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT E 64 E 64 4 12 43 5 13 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT L 65 L 65 4 12 43 4 4 5 26 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT Q 66 Q 66 4 12 43 4 4 5 11 27 33 36 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT E 67 E 67 4 12 43 4 4 12 23 30 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT V 68 V 68 4 7 43 4 4 4 5 7 33 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT G 69 G 69 4 25 43 0 3 4 6 16 26 35 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT P 70 P 70 4 25 43 2 3 6 6 7 13 19 22 35 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT P 71 P 71 4 25 43 4 10 15 25 30 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT D 72 D 72 6 25 43 2 14 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 73 C 73 14 25 43 3 15 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT R 74 R 74 14 25 43 6 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 75 C 75 14 25 43 5 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT D 76 D 76 14 25 43 4 10 22 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT N 77 N 77 14 25 43 4 10 15 23 30 33 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT L 78 L 78 14 25 43 4 16 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 79 C 79 14 25 43 4 15 23 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT K 80 K 80 14 25 43 4 10 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT S 81 S 81 14 25 43 6 17 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT Y 82 Y 82 14 25 43 5 15 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT S 83 S 83 14 25 43 6 16 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT S 84 S 84 14 25 43 6 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 85 C 85 14 25 43 8 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 86 C 86 14 25 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT H 87 H 87 14 25 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT D 88 D 88 14 25 43 6 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT F 89 F 89 14 25 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT D 90 D 90 14 25 43 5 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT E 91 E 91 14 25 43 5 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT L 92 L 92 14 25 43 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT C 93 C 93 14 25 43 3 15 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT L 94 L 94 10 25 43 3 7 11 23 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT K 95 K 95 10 25 43 3 6 11 24 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 LCS_GDT T 96 T 96 3 4 43 3 4 4 4 4 5 26 30 33 38 40 41 43 43 43 43 43 43 43 43 LCS_GDT A 97 A 97 3 4 43 3 4 4 4 4 4 4 11 34 38 40 42 43 43 43 43 43 43 43 43 LCS_GDT R 98 R 98 3 4 43 0 3 3 3 4 4 4 7 37 40 40 42 43 43 43 43 43 43 43 43 LCS_AVERAGE LCS_A: 3.07 ( 1.23 2.49 5.48 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 18 24 28 32 34 37 39 39 40 40 42 43 43 43 43 43 43 43 43 GDT PERCENT_AT 1.15 2.30 3.06 3.57 4.08 4.34 4.72 4.97 4.97 5.10 5.10 5.36 5.48 5.48 5.48 5.48 5.48 5.48 5.48 5.48 GDT RMS_LOCAL 0.36 0.68 0.92 1.09 1.42 1.58 1.82 2.08 2.08 2.31 2.25 2.66 2.86 2.86 2.86 2.86 2.86 2.86 2.86 2.86 GDT RMS_ALL_AT 3.11 3.03 2.95 2.95 2.97 2.92 2.93 2.93 2.93 2.95 2.90 2.87 2.86 2.86 2.86 2.86 2.86 2.86 2.86 2.86 # Checking swapping # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # possible swapping detected: Y 82 Y 82 # possible swapping detected: D 88 D 88 # possible swapping detected: D 90 D 90 # possible swapping detected: E 91 E 91 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 1.287 0 0.150 0.150 1.287 81.429 81.429 LGA S 57 S 57 1.113 0 0.152 0.526 1.942 79.286 78.571 LGA C 58 C 58 0.736 0 0.130 0.364 0.989 90.476 90.476 LGA K 59 K 59 0.761 0 0.575 1.069 3.573 76.429 69.312 LGA G 60 G 60 1.376 0 0.126 0.126 1.409 81.429 81.429 LGA R 61 R 61 1.346 0 0.078 1.582 3.906 81.429 70.043 LGA C 62 C 62 1.430 0 0.640 0.762 2.425 77.262 74.444 LGA F 63 F 63 3.060 0 0.235 0.253 8.740 63.095 30.909 LGA E 64 E 64 1.629 0 0.737 1.108 6.042 69.286 55.714 LGA L 65 L 65 2.626 0 0.637 0.935 3.806 57.619 52.143 LGA Q 66 Q 66 4.003 0 0.106 0.146 10.982 54.524 27.460 LGA E 67 E 67 3.083 0 0.086 1.337 8.647 59.167 30.582 LGA V 68 V 68 3.436 0 0.571 0.677 8.055 43.690 30.000 LGA G 69 G 69 5.300 0 0.508 0.508 6.507 26.071 26.071 LGA P 70 P 70 7.013 0 0.135 0.358 11.018 15.833 9.524 LGA P 71 P 71 3.370 0 0.179 0.298 4.140 58.214 50.952 LGA D 72 D 72 1.748 3 0.628 0.600 3.780 63.452 37.976 LGA C 73 C 73 0.824 0 0.135 0.184 2.562 90.595 82.063 LGA R 74 R 74 0.582 0 0.062 1.240 5.726 90.476 74.459 LGA C 75 C 75 1.144 0 0.505 0.816 1.662 81.548 78.651 LGA D 76 D 76 2.290 0 0.087 1.077 5.692 64.762 54.821 LGA N 77 N 77 3.338 0 0.127 0.928 6.518 53.571 42.440 LGA L 78 L 78 1.339 0 0.124 0.537 2.995 79.524 78.690 LGA C 79 C 79 1.675 0 0.163 0.763 2.757 79.286 77.460 LGA K 80 K 80 1.924 0 0.134 0.506 4.039 75.000 59.841 LGA S 81 S 81 1.148 0 0.061 0.538 2.008 79.405 77.302 LGA Y 82 Y 82 1.728 0 0.569 1.443 7.204 71.071 55.794 LGA S 83 S 83 1.412 0 0.372 0.322 3.046 79.405 73.413 LGA S 84 S 84 0.489 0 0.441 0.801 3.093 84.167 79.524 LGA C 85 C 85 0.653 0 0.134 0.605 3.040 90.476 82.222 LGA C 86 C 86 0.958 0 0.092 0.788 2.680 90.476 84.921 LGA H 87 H 87 1.248 0 0.078 1.219 7.629 83.690 54.667 LGA D 88 D 88 0.673 0 0.161 0.941 2.680 90.595 79.940 LGA F 89 F 89 0.543 0 0.264 0.366 1.010 92.857 91.385 LGA D 90 D 90 0.558 0 0.017 0.520 1.803 92.857 88.333 LGA E 91 E 91 0.706 0 0.144 0.758 2.641 90.476 84.762 LGA L 92 L 92 0.958 0 0.074 1.401 6.388 90.476 66.548 LGA C 93 C 93 1.366 0 0.104 0.124 3.382 77.381 69.444 LGA L 94 L 94 2.757 0 0.369 1.417 8.797 57.619 36.369 LGA K 95 K 95 3.319 0 0.628 1.190 5.518 40.000 41.958 LGA T 96 T 96 8.023 0 0.112 1.084 12.702 8.452 5.034 LGA A 97 A 97 7.204 0 0.588 0.560 7.880 19.048 16.667 LGA R 98 R 98 5.950 0 0.270 0.973 13.540 19.286 10.823 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 43 172 172 100.00 326 326 100.00 784 SUMMARY(RMSD_GDC): 2.856 2.757 4.006 3.764 3.246 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 784 4.0 39 2.08 4.082 3.874 1.793 LGA_LOCAL RMSD: 2.075 Number of atoms: 39 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.928 Number of assigned atoms: 43 Std_ASGN_ATOMS RMSD: 2.856 Standard rmsd on all 43 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.450416 * X + -0.808768 * Y + -0.378180 * Z + 57.023739 Y_new = -0.298676 * X + 0.535668 * Y + -0.789843 * Z + 129.337341 Z_new = 0.841379 * X + -0.242805 * Y + -0.482833 * Z + 60.807178 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.556055 -0.999830 -2.675648 [DEG: -146.4512 -57.2860 -153.3033 ] ZXZ: -0.446547 2.074683 1.851743 [DEG: -25.5853 118.8706 106.0970 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS365_1_1 REMARK 2: T0543.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS365_1_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 784 4.0 39 2.08 3.874 2.86 REMARK ---------------------------------------------------------- MOLECULE T0543TS365_1_1 REMARK PARENT number 1 PFRMAT TS TARGET T0543 PARENT N/A ATOM 1 N THR 54 38.083 67.518 15.908 1.00 1.00 ATOM 2 CA THR 54 38.392 68.176 17.134 1.00 1.00 ATOM 3 C THR 54 37.708 69.491 17.069 1.00 1.00 ATOM 4 O THR 54 38.073 70.395 16.315 1.00 1.00 ATOM 5 HN THR 54 38.847 67.476 15.265 1.00 1.00 ATOM 6 CB THR 54 39.873 68.332 17.373 1.00 1.00 ATOM 7 OG1 THR 54 40.511 68.992 16.288 1.00 1.00 ATOM 8 CG2 THR 54 40.477 66.929 17.552 1.00 1.00 ATOM 9 N SER 55 36.647 69.621 17.891 1.00 1.00 ATOM 10 CA SER 55 35.830 70.797 17.865 1.00 1.00 ATOM 11 C SER 55 35.118 70.979 19.164 1.00 1.00 ATOM 12 O SER 55 35.083 70.087 20.010 1.00 1.00 ATOM 13 HN SER 55 36.354 68.936 18.559 1.00 1.00 ATOM 14 CB SER 55 34.737 70.744 16.777 1.00 1.00 ATOM 15 OG SER 55 33.853 69.662 17.028 1.00 1.00 ATOM 16 N GLY 56 34.544 72.190 19.340 1.00 1.00 ATOM 17 CA GLY 56 33.759 72.488 20.497 1.00 1.00 ATOM 18 C GLY 56 32.812 73.582 20.129 1.00 1.00 ATOM 19 O GLY 56 32.729 74.590 20.830 1.00 1.00 ATOM 20 HN GLY 56 34.621 72.949 18.694 1.00 1.00 ATOM 21 N SER 57 32.138 73.441 18.972 1.00 1.00 ATOM 22 CA SER 57 31.216 74.450 18.555 1.00 1.00 ATOM 23 C SER 57 29.974 73.812 18.037 1.00 1.00 ATOM 24 O SER 57 29.955 72.604 17.824 1.00 1.00 ATOM 25 HN SER 57 32.212 72.671 18.339 1.00 1.00 ATOM 26 CB SER 57 31.781 75.391 17.474 1.00 1.00 ATOM 27 OG SER 57 31.775 74.757 16.205 1.00 1.00 ATOM 28 N CYS 58 28.889 74.599 17.850 1.00 1.00 ATOM 29 CA CYS 58 27.653 74.000 17.413 1.00 1.00 ATOM 30 C CYS 58 27.173 74.561 16.114 1.00 1.00 ATOM 31 O CYS 58 25.963 74.586 15.888 1.00 1.00 ATOM 32 HN CYS 58 28.837 75.588 17.983 1.00 1.00 ATOM 33 CB CYS 58 26.518 74.150 18.437 1.00 1.00 ATOM 34 SG CYS 58 27.156 74.058 20.137 1.00 1.00 ATOM 35 N LYS 59 28.125 74.875 15.207 1.00 1.00 ATOM 36 CA LYS 59 27.918 75.578 13.961 1.00 1.00 ATOM 37 C LYS 59 26.879 74.936 13.078 1.00 1.00 ATOM 38 O LYS 59 25.937 75.601 12.647 1.00 1.00 ATOM 39 HN LYS 59 29.076 74.615 15.374 1.00 1.00 ATOM 40 CB LYS 59 29.223 75.594 13.144 1.00 1.00 ATOM 41 CG LYS 59 30.320 76.411 13.770 1.00 1.00 ATOM 42 CD LYS 59 31.565 76.395 12.940 1.00 1.00 ATOM 43 CE LYS 59 32.331 75.134 12.808 1.00 1.00 ATOM 44 NZ LYS 59 33.559 75.282 11.941 1.00 1.00 ATOM 45 N GLY 60 27.010 73.632 12.789 1.00 1.00 ATOM 46 CA GLY 60 25.971 72.968 12.052 1.00 1.00 ATOM 47 C GLY 60 25.740 71.694 12.783 1.00 1.00 ATOM 48 O GLY 60 25.406 70.670 12.192 1.00 1.00 ATOM 49 HN GLY 60 27.777 73.039 13.034 1.00 1.00 ATOM 50 N ARG 61 26.017 71.740 14.099 1.00 1.00 ATOM 51 CA ARG 61 25.906 70.647 15.002 1.00 1.00 ATOM 52 C ARG 61 24.609 70.552 15.749 1.00 1.00 ATOM 53 O ARG 61 24.326 69.516 16.346 1.00 1.00 ATOM 54 HN ARG 61 26.331 72.589 14.524 1.00 1.00 ATOM 55 CB ARG 61 27.187 70.499 15.821 1.00 1.00 ATOM 56 CG ARG 61 27.382 69.193 16.487 1.00 1.00 ATOM 57 CD ARG 61 28.852 69.155 16.901 1.00 1.00 ATOM 58 NE ARG 61 29.644 69.519 15.731 1.00 1.00 ATOM 59 CZ ARG 61 30.016 68.646 14.798 1.00 1.00 ATOM 60 NH1 ARG 61 29.732 67.353 14.957 1.00 1.00 ATOM 61 NH2 ARG 61 30.716 69.092 13.761 1.00 1.00 ATOM 62 N CYS 62 23.792 71.622 15.733 1.00 1.00 ATOM 63 CA CYS 62 22.517 71.608 16.413 1.00 1.00 ATOM 64 C CYS 62 21.550 70.618 15.825 1.00 1.00 ATOM 65 O CYS 62 20.723 70.071 16.553 1.00 1.00 ATOM 66 HN CYS 62 24.001 72.489 15.279 1.00 1.00 ATOM 67 CB CYS 62 21.884 73.000 16.392 1.00 1.00 ATOM 68 SG CYS 62 21.908 73.807 14.775 1.00 1.00 ATOM 69 N PHE 63 21.567 70.391 14.500 1.00 1.00 ATOM 70 CA PHE 63 20.634 69.477 13.890 1.00 1.00 ATOM 71 C PHE 63 21.010 68.032 14.101 1.00 1.00 ATOM 72 O PHE 63 20.143 67.162 14.117 1.00 1.00 ATOM 73 HN PHE 63 22.200 70.817 13.854 1.00 1.00 ATOM 74 CB PHE 63 20.519 69.753 12.391 1.00 1.00 ATOM 75 CG PHE 63 20.620 71.187 11.931 1.00 1.00 ATOM 76 CD1 PHE 63 19.575 72.084 12.227 1.00 1.00 ATOM 77 CD2 PHE 63 21.714 71.674 11.251 1.00 1.00 ATOM 78 CE1 PHE 63 19.629 73.375 11.739 1.00 1.00 ATOM 79 CE2 PHE 63 21.808 72.954 10.774 1.00 1.00 ATOM 80 CZ PHE 63 20.730 73.840 11.046 1.00 1.00 ATOM 81 N GLU 64 22.317 67.748 14.273 1.00 1.00 ATOM 82 CA GLU 64 23.058 66.218 14.178 1.00 1.00 ATOM 83 C GLU 64 22.627 65.073 15.275 1.00 1.00 ATOM 84 O GLU 64 22.744 63.905 14.897 1.00 1.00 ATOM 85 HN GLU 64 22.950 68.494 14.480 1.00 1.00 ATOM 86 CB GLU 64 24.566 66.221 14.408 1.00 1.00 ATOM 87 CG GLU 64 25.386 66.985 13.327 1.00 1.00 ATOM 88 CD GLU 64 25.673 66.289 12.031 1.00 1.00 ATOM 89 OE1 GLU 64 26.208 65.220 11.925 1.00 1.00 ATOM 90 OE2 GLU 64 25.309 66.911 11.017 1.00 1.00 ATOM 91 N LEU 65 22.350 65.431 16.371 1.00 1.00 ATOM 92 CA LEU 65 22.204 64.583 17.663 1.00 1.00 ATOM 93 C LEU 65 23.609 64.306 18.147 1.00 1.00 ATOM 94 O LEU 65 24.557 64.886 17.620 1.00 1.00 ATOM 95 HN LEU 65 22.183 66.408 16.505 1.00 1.00 ATOM 96 CB LEU 65 21.224 63.342 17.655 1.00 1.00 ATOM 97 CG LEU 65 19.792 63.721 17.595 1.00 1.00 ATOM 98 CD1 LEU 65 19.461 64.051 16.155 1.00 1.00 ATOM 99 CD2 LEU 65 18.860 62.659 18.163 1.00 1.00 ATOM 100 N GLN 66 23.792 63.467 19.194 1.00 1.00 ATOM 101 CA GLN 66 24.862 63.319 19.711 1.00 1.00 ATOM 102 C GLN 66 25.823 62.599 18.834 1.00 1.00 ATOM 103 O GLN 66 25.485 61.686 18.073 1.00 1.00 ATOM 104 HN GLN 66 23.077 62.913 19.617 1.00 1.00 ATOM 105 CB GLN 66 24.821 62.661 21.105 1.00 1.00 ATOM 106 CG GLN 66 24.604 61.155 21.149 1.00 1.00 ATOM 107 CD GLN 66 24.942 60.570 22.510 1.00 1.00 ATOM 108 OE1 GLN 66 24.722 61.202 23.546 1.00 1.00 ATOM 109 NE2 GLN 66 25.466 59.360 22.519 1.00 1.00 ATOM 110 N GLU 67 27.081 63.072 18.905 1.00 1.00 ATOM 111 CA GLU 67 28.116 62.550 18.085 1.00 1.00 ATOM 112 C GLU 67 29.181 62.099 19.013 1.00 1.00 ATOM 113 O GLU 67 29.668 62.851 19.860 1.00 1.00 ATOM 114 HN GLU 67 27.360 63.805 19.525 1.00 1.00 ATOM 115 CB GLU 67 28.685 63.606 17.131 1.00 1.00 ATOM 116 CG GLU 67 29.457 63.017 15.975 1.00 1.00 ATOM 117 CD GLU 67 28.601 62.191 15.026 1.00 1.00 ATOM 118 OE1 GLU 67 27.376 62.196 15.121 1.00 1.00 ATOM 119 OE2 GLU 67 29.245 61.507 14.175 1.00 1.00 ATOM 120 N VAL 68 29.536 60.815 18.862 1.00 1.00 ATOM 121 CA VAL 68 30.488 60.147 19.695 1.00 1.00 ATOM 122 C VAL 68 31.816 60.818 19.439 1.00 1.00 ATOM 123 O VAL 68 32.599 61.073 20.353 1.00 1.00 ATOM 124 HN VAL 68 29.128 60.229 18.161 1.00 1.00 ATOM 125 CB VAL 68 30.552 58.666 19.351 1.00 1.00 ATOM 126 CG1 VAL 68 31.854 58.006 19.837 1.00 1.00 ATOM 127 CG2 VAL 68 29.313 57.973 19.947 1.00 1.00 ATOM 128 N GLY 69 32.030 61.149 18.255 1.00 1.00 ATOM 129 CA GLY 69 33.192 61.625 17.800 1.00 1.00 ATOM 130 C GLY 69 33.654 62.908 18.377 1.00 1.00 ATOM 131 O GLY 69 34.862 63.008 18.577 1.00 1.00 ATOM 132 HN GLY 69 31.324 61.061 17.553 1.00 1.00 ATOM 133 N PRO 70 32.873 63.950 18.476 1.00 1.00 ATOM 134 CA PRO 70 33.337 65.037 19.459 1.00 1.00 ATOM 135 C PRO 70 32.731 64.731 20.786 1.00 1.00 ATOM 136 O PRO 70 31.505 64.853 20.841 1.00 1.00 ATOM 137 CB PRO 70 32.935 66.325 18.814 1.00 1.00 ATOM 138 CG PRO 70 32.273 65.945 17.521 1.00 1.00 ATOM 139 CD PRO 70 31.665 64.565 17.763 1.00 1.00 ATOM 140 N PRO 71 33.361 64.379 21.773 1.00 1.00 ATOM 141 CA PRO 71 32.713 64.558 23.138 1.00 1.00 ATOM 142 C PRO 71 33.042 65.814 23.528 1.00 1.00 ATOM 143 O PRO 71 32.460 66.285 24.505 1.00 1.00 ATOM 144 CB PRO 71 33.375 63.524 24.000 1.00 1.00 ATOM 145 CG PRO 71 34.350 62.818 23.108 1.00 1.00 ATOM 146 CD PRO 71 34.765 63.844 22.057 1.00 1.00 ATOM 147 N ASP 72 34.021 66.430 22.803 1.00 1.00 ATOM 148 CA ASP 72 34.756 67.743 23.045 1.00 1.00 ATOM 149 C ASP 72 33.720 68.797 23.128 1.00 1.00 ATOM 150 O ASP 72 33.839 69.727 23.923 1.00 1.00 ATOM 151 HN ASP 72 34.310 65.948 21.976 1.00 1.00 ATOM 152 CB ASP 72 35.667 68.059 21.833 1.00 1.00 ATOM 153 CG ASP 72 37.109 67.721 22.017 1.00 1.00 ATOM 154 OD1 ASP 72 37.682 68.031 23.083 1.00 1.00 ATOM 155 OD2 ASP 72 37.644 67.138 21.080 1.00 1.00 ATOM 156 N CYS 73 32.592 68.634 22.246 1.00 1.00 ATOM 157 CA CYS 73 31.493 69.526 22.340 1.00 1.00 ATOM 158 C CYS 73 30.231 68.857 21.977 1.00 1.00 ATOM 159 O CYS 73 30.203 67.893 21.212 1.00 1.00 ATOM 160 HN CYS 73 32.456 67.894 21.589 1.00 1.00 ATOM 161 CB CYS 73 31.587 70.705 21.384 1.00 1.00 ATOM 162 SG CYS 73 32.030 70.166 19.711 1.00 1.00 ATOM 163 N ARG 74 29.146 69.354 22.520 1.00 1.00 ATOM 164 CA ARG 74 27.944 68.906 22.232 1.00 1.00 ATOM 165 C ARG 74 26.951 70.023 21.972 1.00 1.00 ATOM 166 O ARG 74 27.105 71.111 22.469 1.00 1.00 ATOM 167 HN ARG 74 29.152 70.117 23.166 1.00 1.00 ATOM 168 CB ARG 74 27.419 68.017 23.361 1.00 1.00 ATOM 169 CG ARG 74 27.888 66.614 23.347 1.00 1.00 ATOM 170 CD ARG 74 26.958 65.862 24.299 1.00 1.00 ATOM 171 NE ARG 74 27.386 64.468 24.316 1.00 1.00 ATOM 172 CZ ARG 74 28.356 64.009 25.103 1.00 1.00 ATOM 173 NH1 ARG 74 29.041 64.859 25.867 1.00 1.00 ATOM 174 NH2 ARG 74 28.647 62.714 25.055 1.00 1.00 ATOM 175 N CYS 75 25.926 69.765 21.195 1.00 1.00 ATOM 176 CA CYS 75 24.846 70.700 21.023 1.00 1.00 ATOM 177 C CYS 75 23.559 69.928 20.867 1.00 1.00 ATOM 178 O CYS 75 23.418 69.159 19.939 1.00 1.00 ATOM 179 HN CYS 75 25.806 68.909 20.695 1.00 1.00 ATOM 180 CB CYS 75 25.107 71.603 19.815 1.00 1.00 ATOM 181 SG CYS 75 26.030 70.812 18.476 1.00 1.00 ATOM 182 N ASP 76 22.625 70.110 21.778 1.00 1.00 ATOM 183 CA ASP 76 21.257 69.819 21.560 1.00 1.00 ATOM 184 C ASP 76 20.437 70.517 22.656 1.00 1.00 ATOM 185 O ASP 76 20.988 70.840 23.709 1.00 1.00 ATOM 186 HN ASP 76 22.824 70.469 22.690 1.00 1.00 ATOM 187 CB ASP 76 21.026 68.306 21.560 1.00 1.00 ATOM 188 CG ASP 76 19.850 67.640 21.009 1.00 1.00 ATOM 189 OD1 ASP 76 19.298 68.106 19.984 1.00 1.00 ATOM 190 OD2 ASP 76 19.385 66.797 21.846 1.00 1.00 ATOM 191 N ASN 77 19.145 70.689 22.390 1.00 1.00 ATOM 192 CA ASN 77 18.282 71.263 23.339 1.00 1.00 ATOM 193 C ASN 77 18.646 70.593 24.648 1.00 1.00 ATOM 194 O ASN 77 18.684 71.233 25.685 1.00 1.00 ATOM 195 HN ASN 77 18.700 70.457 21.526 1.00 1.00 ATOM 196 CB ASN 77 16.823 71.066 22.925 1.00 1.00 ATOM 197 CG ASN 77 16.491 71.801 21.656 1.00 1.00 ATOM 198 OD1 ASN 77 15.844 71.275 20.747 1.00 1.00 ATOM 199 ND2 ASN 77 16.924 73.055 21.547 1.00 1.00 ATOM 200 N LEU 78 18.899 69.302 24.577 1.00 1.00 ATOM 201 CA LEU 78 19.401 68.455 25.781 1.00 1.00 ATOM 202 C LEU 78 20.706 68.847 26.297 1.00 1.00 ATOM 203 O LEU 78 21.032 68.527 27.384 1.00 1.00 ATOM 204 HN LEU 78 18.762 68.775 23.738 1.00 1.00 ATOM 205 CB LEU 78 19.460 66.972 25.404 1.00 1.00 ATOM 206 CG LEU 78 18.133 66.334 25.101 1.00 1.00 ATOM 207 CD1 LEU 78 18.351 65.072 24.291 1.00 1.00 ATOM 208 CD2 LEU 78 17.315 66.067 26.358 1.00 1.00 ATOM 209 N CYS 79 21.450 69.542 25.537 1.00 1.00 ATOM 210 CA CYS 79 22.680 70.274 26.384 1.00 1.00 ATOM 211 C CYS 79 22.567 70.542 28.031 1.00 1.00 ATOM 212 O CYS 79 23.437 70.127 28.799 1.00 1.00 ATOM 213 HN CYS 79 21.456 69.741 24.558 1.00 1.00 ATOM 214 CB CYS 79 22.986 71.653 25.799 1.00 1.00 ATOM 215 SG CYS 79 24.018 71.622 24.314 1.00 1.00 ATOM 216 N LYS 80 21.508 71.206 28.486 1.00 1.00 ATOM 217 CA LYS 80 21.308 71.369 29.871 1.00 1.00 ATOM 218 C LYS 80 21.051 70.222 30.475 1.00 1.00 ATOM 219 O LYS 80 21.271 70.094 31.655 1.00 1.00 ATOM 220 HN LYS 80 20.779 71.608 27.931 1.00 1.00 ATOM 221 CB LYS 80 20.168 72.353 30.136 1.00 1.00 ATOM 222 CG LYS 80 20.545 73.801 29.945 1.00 1.00 ATOM 223 CD LYS 80 21.519 74.271 30.981 1.00 1.00 ATOM 224 CE LYS 80 22.251 75.539 30.763 1.00 1.00 ATOM 225 NZ LYS 80 23.192 75.875 31.895 1.00 1.00 ATOM 226 N SER 81 20.556 69.243 29.752 1.00 1.00 ATOM 227 CA SER 81 20.264 67.929 30.312 1.00 1.00 ATOM 228 C SER 81 21.500 67.120 30.565 1.00 1.00 ATOM 229 O SER 81 21.662 66.559 31.692 1.00 1.00 ATOM 230 HN SER 81 20.344 69.326 28.778 1.00 1.00 ATOM 231 CB SER 81 19.331 67.146 29.387 1.00 1.00 ATOM 232 OG SER 81 18.466 66.304 30.128 1.00 1.00 ATOM 233 N TYR 82 22.368 67.026 29.576 1.00 1.00 ATOM 234 CA TYR 82 23.695 66.372 29.739 1.00 1.00 ATOM 235 C TYR 82 24.407 67.645 29.928 1.00 1.00 ATOM 236 O TYR 82 24.503 68.064 29.503 1.00 1.00 ATOM 237 HN TYR 82 22.200 67.383 28.657 1.00 1.00 ATOM 238 CB TYR 82 24.025 65.520 28.512 1.00 1.00 ATOM 239 CG TYR 82 25.353 64.807 28.742 1.00 1.00 ATOM 240 CD1 TYR 82 25.457 63.660 29.500 1.00 1.00 ATOM 241 CD2 TYR 82 26.536 65.331 28.222 1.00 1.00 ATOM 242 CE1 TYR 82 26.672 63.038 29.760 1.00 1.00 ATOM 243 CE2 TYR 82 27.770 64.764 28.500 1.00 1.00 ATOM 244 CZ TYR 82 27.828 63.626 29.275 1.00 1.00 ATOM 245 OH TYR 82 29.038 63.075 29.619 1.00 1.00 ATOM 246 N SER 83 24.988 68.339 30.632 1.00 1.00 ATOM 247 CA SER 83 25.430 69.655 30.865 1.00 1.00 ATOM 248 C SER 83 26.440 70.003 29.740 1.00 1.00 ATOM 249 O SER 83 26.798 71.084 29.599 1.00 1.00 ATOM 250 HN SER 83 25.261 67.686 31.339 1.00 1.00 ATOM 251 CB SER 83 26.055 69.771 32.257 1.00 1.00 ATOM 252 OG SER 83 25.199 69.220 33.246 1.00 1.00 ATOM 253 N SER 84 26.877 69.084 28.959 1.00 1.00 ATOM 254 CA SER 84 27.659 69.299 28.065 1.00 1.00 ATOM 255 C SER 84 27.225 69.990 26.780 1.00 1.00 ATOM 256 O SER 84 26.481 69.428 25.999 1.00 1.00 ATOM 257 HN SER 84 26.567 68.135 29.008 1.00 1.00 ATOM 258 CB SER 84 28.306 67.994 27.595 1.00 1.00 ATOM 259 OG SER 84 29.641 68.207 27.172 1.00 1.00 ATOM 260 N CYS 85 27.698 71.202 26.590 1.00 1.00 ATOM 261 CA CYS 85 27.345 71.900 25.626 1.00 1.00 ATOM 262 C CYS 85 28.452 72.723 25.297 1.00 1.00 ATOM 263 O CYS 85 29.336 72.882 26.076 1.00 1.00 ATOM 264 HN CYS 85 28.333 71.660 27.212 1.00 1.00 ATOM 265 CB CYS 85 26.097 72.713 25.978 1.00 1.00 ATOM 266 SG CYS 85 25.990 73.199 27.717 1.00 1.00 ATOM 267 N CYS 86 28.465 73.256 24.214 1.00 1.00 ATOM 268 CA CYS 86 29.410 74.039 23.937 1.00 1.00 ATOM 269 C CYS 86 28.926 75.448 24.232 1.00 1.00 ATOM 270 O CYS 86 27.756 75.723 24.209 1.00 1.00 ATOM 271 HN CYS 86 27.738 73.249 23.528 1.00 1.00 ATOM 272 CB CYS 86 29.835 73.871 22.476 1.00 1.00 ATOM 273 SG CYS 86 28.542 74.259 21.273 1.00 1.00 ATOM 274 N HIS 87 29.775 76.288 24.475 1.00 1.00 ATOM 275 CA HIS 87 29.469 77.649 24.683 1.00 1.00 ATOM 276 C HIS 87 28.682 78.350 23.310 1.00 1.00 ATOM 277 O HIS 87 27.835 79.228 23.456 1.00 1.00 ATOM 278 HN HIS 87 30.751 76.078 24.523 1.00 1.00 ATOM 279 CB HIS 87 30.738 78.440 25.010 1.00 1.00 ATOM 280 CG HIS 87 30.511 79.948 24.954 1.00 1.00 ATOM 281 ND1 HIS 87 29.827 80.630 25.957 1.00 1.00 ATOM 282 CD2 HIS 87 30.861 80.791 23.979 1.00 1.00 ATOM 283 CE1 HIS 87 29.797 81.963 25.628 1.00 1.00 ATOM 284 NE2 HIS 87 30.433 82.073 24.395 1.00 1.00 ATOM 285 N ASP 88 29.013 77.886 22.115 1.00 1.00 ATOM 286 CA ASP 88 28.336 78.345 20.914 1.00 1.00 ATOM 287 C ASP 88 27.021 77.482 20.847 1.00 1.00 ATOM 288 O ASP 88 26.084 77.702 20.112 1.00 1.00 ATOM 289 HN ASP 88 29.711 77.191 21.946 1.00 1.00 ATOM 290 CB ASP 88 29.239 78.176 19.691 1.00 1.00 ATOM 291 CG ASP 88 30.423 79.096 19.622 1.00 1.00 ATOM 292 OD1 ASP 88 30.260 80.308 19.878 1.00 1.00 ATOM 293 OD2 ASP 88 31.496 78.583 19.324 1.00 1.00 ATOM 294 N PHE 89 26.972 76.543 21.610 1.00 1.00 ATOM 295 CA PHE 89 25.118 76.294 21.704 1.00 1.00 ATOM 296 C PHE 89 24.106 77.428 21.857 1.00 1.00 ATOM 297 O PHE 89 23.095 77.466 21.164 1.00 1.00 ATOM 298 HN PHE 89 27.496 75.905 22.175 1.00 1.00 ATOM 299 CB PHE 89 24.759 75.366 22.866 1.00 1.00 ATOM 300 CG PHE 89 23.542 74.544 22.509 1.00 1.00 ATOM 301 CD1 PHE 89 23.505 73.864 21.300 1.00 1.00 ATOM 302 CD2 PHE 89 22.422 74.547 23.305 1.00 1.00 ATOM 303 CE1 PHE 89 22.341 73.197 20.893 1.00 1.00 ATOM 304 CE2 PHE 89 21.258 73.900 22.899 1.00 1.00 ATOM 305 CZ PHE 89 21.234 73.234 21.689 1.00 1.00 ATOM 306 N ASP 90 24.395 78.358 22.761 1.00 1.00 ATOM 307 CA ASP 90 23.469 79.446 22.969 1.00 1.00 ATOM 308 C ASP 90 23.523 80.395 21.779 1.00 1.00 ATOM 309 O ASP 90 22.490 80.904 21.341 1.00 1.00 ATOM 310 HN ASP 90 25.208 78.400 23.341 1.00 1.00 ATOM 311 CB ASP 90 23.789 80.182 24.271 1.00 1.00 ATOM 312 CG ASP 90 23.503 79.427 25.536 1.00 1.00 ATOM 313 OD1 ASP 90 22.420 78.813 25.639 1.00 1.00 ATOM 314 OD2 ASP 90 24.376 79.455 26.398 1.00 1.00 ATOM 315 N GLU 91 24.711 80.631 21.237 1.00 1.00 ATOM 316 CA GLU 91 24.820 81.465 20.153 1.00 1.00 ATOM 317 C GLU 91 24.162 80.898 18.902 1.00 1.00 ATOM 318 O GLU 91 23.555 81.627 18.137 1.00 1.00 ATOM 319 HN GLU 91 25.582 80.250 21.547 1.00 1.00 ATOM 320 CB GLU 91 26.290 81.764 19.854 1.00 1.00 ATOM 321 CG GLU 91 26.982 82.542 20.949 1.00 1.00 ATOM 322 CD GLU 91 26.429 83.947 21.147 1.00 1.00 ATOM 323 OE1 GLU 91 26.114 84.637 20.182 1.00 1.00 ATOM 324 OE2 GLU 91 26.348 84.330 22.352 1.00 1.00 ATOM 325 N LEU 92 24.275 79.598 18.688 1.00 1.00 ATOM 326 CA LEU 92 23.744 79.031 17.440 1.00 1.00 ATOM 327 C LEU 92 22.254 78.774 17.565 1.00 1.00 ATOM 328 O LEU 92 21.526 78.944 16.590 1.00 1.00 ATOM 329 HN LEU 92 24.696 78.923 19.294 1.00 1.00 ATOM 330 CB LEU 92 24.480 77.737 17.084 1.00 1.00 ATOM 331 CG LEU 92 23.732 76.806 16.167 1.00 1.00 ATOM 332 CD1 LEU 92 24.471 76.690 14.852 1.00 1.00 ATOM 333 CD2 LEU 92 23.482 75.444 16.802 1.00 1.00 ATOM 334 N CYS 93 21.768 78.373 18.733 1.00 1.00 ATOM 335 CA CYS 93 20.329 78.080 18.812 1.00 1.00 ATOM 336 C CYS 93 19.583 79.406 18.687 1.00 1.00 ATOM 337 O CYS 93 18.531 79.481 18.054 1.00 1.00 ATOM 338 HN CYS 93 22.258 78.240 19.594 1.00 1.00 ATOM 339 CB CYS 93 20.000 77.359 20.121 1.00 1.00 ATOM 340 SG CYS 93 21.055 75.934 20.476 1.00 1.00 ATOM 341 N LEU 94 20.130 80.461 19.285 1.00 1.00 ATOM 342 CA LEU 94 19.499 81.771 19.184 1.00 1.00 ATOM 343 C LEU 94 19.592 82.273 17.746 1.00 1.00 ATOM 344 O LEU 94 18.628 82.820 17.209 1.00 1.00 ATOM 345 HN LEU 94 20.992 80.463 19.789 1.00 1.00 ATOM 346 CB LEU 94 20.155 82.757 20.151 1.00 1.00 ATOM 347 CG LEU 94 19.980 84.211 19.804 1.00 1.00 ATOM 348 CD1 LEU 94 19.489 84.967 21.020 1.00 1.00 ATOM 349 CD2 LEU 94 21.246 84.827 19.224 1.00 1.00 ATOM 350 N LYS 95 20.747 82.091 17.114 1.00 1.00 ATOM 351 CA LYS 95 20.920 82.533 15.743 1.00 1.00 ATOM 352 C LYS 95 20.046 81.744 14.774 1.00 1.00 ATOM 353 O LYS 95 19.462 82.315 13.854 1.00 1.00 ATOM 354 HN LYS 95 21.558 81.656 17.506 1.00 1.00 ATOM 355 CB LYS 95 22.386 82.418 15.321 1.00 1.00 ATOM 356 CG LYS 95 22.669 82.925 13.929 1.00 1.00 ATOM 357 CD LYS 95 24.005 82.474 13.428 1.00 1.00 ATOM 358 CE LYS 95 25.217 83.232 13.815 1.00 1.00 ATOM 359 NZ LYS 95 26.484 82.653 13.229 1.00 1.00 ATOM 360 N THR 96 19.944 80.432 14.975 1.00 1.00 ATOM 361 CA THR 96 19.121 79.636 14.067 1.00 1.00 ATOM 362 C THR 96 17.662 80.023 14.291 1.00 1.00 ATOM 363 O THR 96 16.887 80.136 13.342 1.00 1.00 ATOM 364 HN THR 96 20.380 79.901 15.702 1.00 1.00 ATOM 365 CB THR 96 19.333 78.127 14.288 1.00 1.00 ATOM 366 OG1 THR 96 19.278 77.835 15.690 1.00 1.00 ATOM 367 CG2 THR 96 20.691 77.696 13.754 1.00 1.00 ATOM 368 N ALA 97 17.282 80.234 15.547 1.00 1.00 ATOM 369 CA ALA 97 15.903 80.608 15.842 1.00 1.00 ATOM 370 C ALA 97 15.617 82.005 15.306 1.00 1.00 ATOM 371 O ALA 97 14.540 82.257 14.776 1.00 1.00 ATOM 372 HN ALA 97 17.867 80.163 16.355 1.00 1.00 ATOM 373 CB ALA 97 15.645 80.540 17.339 1.00 1.00 ATOM 374 N ARG 98 16.574 82.916 15.437 1.00 1.00 ATOM 375 CA ARG 98 16.420 84.261 14.934 1.00 1.00 ATOM 376 C ARG 98 16.251 84.287 13.417 1.00 1.00 ATOM 377 O ARG 98 15.388 84.993 12.896 1.00 1.00 ATOM 378 HN ARG 98 17.453 82.747 15.883 1.00 1.00 ATOM 379 CB ARG 98 17.620 85.122 15.332 1.00 1.00 ATOM 380 CG ARG 98 17.709 85.480 16.764 1.00 1.00 ATOM 381 CD ARG 98 19.020 86.250 16.913 1.00 1.00 ATOM 382 NE ARG 98 19.152 86.620 18.318 1.00 1.00 ATOM 383 CZ ARG 98 20.157 87.353 18.792 1.00 1.00 ATOM 384 NH1 ARG 98 21.149 87.714 17.977 1.00 1.00 ATOM 385 NH2 ARG 98 20.164 87.652 20.086 1.00 1.00 TER END ########################## # # # ACE results: # # # ########################## # WARNING! TARGET 6318 atoms, MODEL 7183 atoms, 6318 common with TARGET Number of atoms possible to evaluate: 326 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.04 57.1 84 5.4 1563 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 534 ARMSMC SURFACE . . . . . . . . 76.66 59.3 54 7.9 680 ARMSMC BURIED . . . . . . . . 62.88 53.3 30 3.4 883 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.78 31.6 38 5.7 670 ARMSSC1 RELIABLE SIDE CHAINS . 94.29 32.4 37 5.9 624 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 233 ARMSSC1 SURFACE . . . . . . . . 90.79 34.8 23 7.8 296 ARMSSC1 BURIED . . . . . . . . 98.18 26.7 15 4.0 374 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.40 41.7 24 5.4 444 ARMSSC2 RELIABLE SIDE CHAINS . 59.95 50.0 18 5.2 343 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 159 ARMSSC2 SURFACE . . . . . . . . 76.92 50.0 14 6.9 203 ARMSSC2 BURIED . . . . . . . . 62.85 30.0 10 4.1 241 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.40 30.0 10 7.2 138 ARMSSC3 RELIABLE SIDE CHAINS . 94.13 22.2 9 7.8 115 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC3 SURFACE . . . . . . . . 87.07 28.6 7 9.5 74 ARMSSC3 BURIED . . . . . . . . 94.62 33.3 3 4.7 64 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 48.50 33.3 6 12.2 49 ARMSSC4 RELIABLE SIDE CHAINS . 48.50 33.3 6 12.2 49 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC4 SURFACE . . . . . . . . 37.88 50.0 4 13.8 29 ARMSSC4 BURIED . . . . . . . . 64.72 0.0 2 10.0 20 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.86 (Number of atoms: 43) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.86 43 5.5 784 CRMSCA CRN = ALL/NP . . . . . 0.0664 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 268 CRMSCA SURFACE . . . . . . . . 3.17 28 8.2 341 CRMSCA BURIED . . . . . . . . 2.14 15 3.4 443 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.97 212 5.5 3872 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 1331 CRMSMC SURFACE . . . . . . . . 3.30 137 8.1 1686 CRMSMC BURIED . . . . . . . . 2.27 75 3.4 2186 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.08 154 4.8 3182 CRMSSC RELIABLE SIDE CHAINS . 4.84 136 5.0 2746 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 1125 CRMSSC SURFACE . . . . . . . . 5.62 93 6.7 1379 CRMSSC BURIED . . . . . . . . 4.12 61 3.4 1803 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.03 326 5.2 6318 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 2197 CRMSALL SURFACE . . . . . . . . 4.40 205 7.5 2743 CRMSALL BURIED . . . . . . . . 3.29 121 3.4 3575 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.419 0.337 0.193 43 5.5 784 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 268 ERRCA SURFACE . . . . . . . . 1.621 0.350 0.198 28 8.2 341 ERRCA BURIED . . . . . . . . 1.043 0.312 0.186 15 3.4 443 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.489 0.342 0.195 212 5.5 3872 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 1331 ERRMC SURFACE . . . . . . . . 1.713 0.366 0.211 137 8.1 1686 ERRMC BURIED . . . . . . . . 1.080 0.298 0.165 75 3.4 2186 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.208 0.509 0.272 154 4.8 3182 ERRSC RELIABLE SIDE CHAINS . 2.957 0.487 0.261 136 5.0 2746 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 1125 ERRSC SURFACE . . . . . . . . 3.639 0.530 0.274 93 6.7 1379 ERRSC BURIED . . . . . . . . 2.551 0.477 0.270 61 3.4 1803 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.234 0.415 0.229 326 5.2 6318 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 2197 ERRALL SURFACE . . . . . . . . 2.506 0.434 0.236 205 7.5 2743 ERRALL BURIED . . . . . . . . 1.773 0.383 0.217 121 3.4 3575 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 26 32 38 43 43 784 DISTCA CA (P) 1.28 3.32 4.08 4.85 5.48 784 DISTCA CA (RMS) 0.68 1.23 1.57 2.01 2.86 DISTCA ALL (N) 58 151 194 261 319 326 6318 DISTALL ALL (P) 0.92 2.39 3.07 4.13 5.05 6318 DISTALL ALL (RMS) 0.70 1.26 1.63 2.37 3.67 DISTALL END of the results output