####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS333_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS333_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 98 - 119 4.98 10.73 LCS_AVERAGE: 46.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 97 - 104 1.93 12.69 LONGEST_CONTINUOUS_SEGMENT: 8 100 - 107 1.19 17.10 LCS_AVERAGE: 14.17 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 102 - 107 0.70 16.58 LCS_AVERAGE: 9.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 4 19 3 3 4 7 8 11 13 13 15 15 16 17 20 24 27 30 31 32 34 35 LCS_GDT A 97 A 97 4 8 21 3 6 7 8 10 11 13 13 15 15 17 23 24 25 28 30 31 33 34 35 LCS_GDT R 98 R 98 4 8 22 3 6 7 8 10 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT G 99 G 99 4 8 22 4 6 7 8 10 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT W 100 W 100 4 8 22 4 6 6 8 9 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT E 101 E 101 4 8 22 4 4 4 8 8 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT C 102 C 102 6 8 22 4 6 6 8 10 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT T 103 T 103 6 8 22 3 6 7 8 10 11 13 13 15 15 20 23 25 27 28 30 31 33 34 35 LCS_GDT K 104 K 104 6 8 22 4 6 7 8 10 11 13 14 16 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT D 105 D 105 6 8 22 4 6 7 8 10 11 13 14 16 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT R 106 R 106 6 8 22 4 6 7 8 10 11 13 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT C 107 C 107 6 8 22 4 6 6 8 10 11 13 13 15 16 19 23 24 27 28 30 31 33 34 35 LCS_GDT G 108 G 108 5 7 22 4 4 5 6 6 8 11 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT E 109 E 109 5 7 22 4 4 5 6 6 8 11 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT V 110 V 110 5 7 22 4 4 5 6 6 8 10 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT R 111 R 111 5 7 22 3 4 5 6 6 8 11 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT N 112 N 112 4 7 22 3 4 5 6 6 8 11 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT E 113 E 113 4 7 22 3 4 5 7 7 8 11 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT E 114 E 114 4 7 22 3 4 5 6 6 7 11 12 15 16 19 23 25 27 28 30 31 33 34 35 LCS_GDT N 115 N 115 4 7 22 3 4 5 6 6 8 11 13 15 16 19 23 25 27 28 30 31 33 34 35 LCS_GDT A 116 A 116 5 7 22 4 5 5 6 6 8 11 13 15 15 17 23 24 27 28 30 31 33 34 35 LCS_GDT C 117 C 117 5 7 22 4 5 5 6 6 8 10 13 15 16 20 23 25 27 28 30 31 33 34 35 LCS_GDT H 118 H 118 5 6 22 4 5 5 5 6 8 10 14 17 18 19 23 25 27 28 30 31 33 34 35 LCS_GDT C 119 C 119 5 6 22 4 5 5 6 7 10 11 14 17 18 19 20 22 26 28 30 31 33 34 35 LCS_GDT S 120 S 120 5 6 21 3 5 5 6 7 10 11 14 17 18 19 20 21 23 25 28 30 32 33 34 LCS_GDT E 121 E 121 4 6 21 3 4 4 6 7 10 11 14 17 17 18 20 22 24 27 30 30 32 33 34 LCS_GDT D 122 D 122 4 6 21 3 4 4 6 7 10 11 14 17 18 19 20 22 23 25 28 30 32 33 34 LCS_GDT C 123 C 123 3 6 21 3 3 5 6 6 7 10 13 17 18 19 20 22 25 28 30 31 33 34 35 LCS_GDT L 124 L 124 3 4 21 3 3 3 4 5 8 11 14 17 18 19 20 22 25 28 30 31 32 34 35 LCS_GDT S 125 S 125 3 4 21 3 3 3 5 6 10 11 14 17 18 19 20 22 25 28 30 31 33 34 35 LCS_GDT R 126 R 126 3 6 21 3 3 4 7 7 8 11 14 17 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT G 127 G 127 3 6 21 3 3 4 6 7 10 11 14 17 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT D 128 D 128 3 6 21 3 3 4 6 7 10 11 14 17 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT C 129 C 129 3 6 21 3 4 4 6 7 9 11 14 17 18 20 23 25 27 28 30 31 33 34 35 LCS_GDT C 130 C 130 4 6 21 3 4 5 5 7 9 11 14 17 18 19 20 22 23 25 26 28 30 32 35 LCS_GDT T 131 T 131 4 6 21 3 4 5 6 7 10 11 14 17 18 19 20 22 26 27 30 31 33 34 35 LCS_GDT N 132 N 132 4 6 21 3 4 5 5 7 10 11 14 17 17 19 20 22 26 28 30 31 33 34 35 LCS_GDT Y 133 Y 133 4 6 21 3 4 5 6 7 9 11 14 17 18 19 23 25 27 28 30 31 33 34 35 LCS_GDT Q 134 Q 134 3 6 21 1 3 5 6 7 10 11 14 17 18 19 23 25 27 28 30 31 33 34 35 LCS_GDT V 135 V 135 3 5 21 3 4 5 8 10 11 13 14 16 18 19 20 22 23 25 26 28 29 33 35 LCS_GDT V 136 V 136 3 5 21 3 3 3 4 5 6 7 9 12 15 16 19 22 23 25 26 28 29 32 34 LCS_GDT C 137 C 137 3 5 21 3 3 3 4 5 6 8 10 13 15 16 19 22 23 25 27 28 31 33 35 LCS_GDT K 138 K 138 3 4 21 3 3 3 4 4 5 8 10 13 15 16 19 22 23 25 26 28 29 32 34 LCS_GDT G 139 G 139 3 4 14 0 3 3 4 4 5 5 7 9 11 12 13 18 19 21 23 26 28 30 32 LCS_GDT E 140 E 140 3 4 10 0 3 3 3 4 5 5 7 8 13 13 15 18 19 21 23 26 28 30 32 LCS_AVERAGE LCS_A: 23.39 ( 9.23 14.17 46.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 10 11 13 14 17 18 20 23 25 27 28 30 31 33 34 35 GDT PERCENT_AT 8.89 13.33 15.56 17.78 22.22 24.44 28.89 31.11 37.78 40.00 44.44 51.11 55.56 60.00 62.22 66.67 68.89 73.33 75.56 77.78 GDT RMS_LOCAL 0.14 0.38 0.88 1.06 1.58 1.79 2.26 2.86 3.38 3.63 4.35 4.72 4.93 5.11 5.25 5.49 5.61 5.96 6.12 6.27 GDT RMS_ALL_AT 15.86 16.39 18.00 17.96 15.59 15.91 14.99 15.86 15.21 13.72 9.92 9.52 9.85 10.04 9.94 9.82 9.83 9.62 9.53 9.51 # Checking swapping # possible swapping detected: D 128 D 128 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 35.888 0 0.276 0.456 39.852 0.000 0.000 LGA A 97 A 97 31.069 0 0.368 0.397 32.717 0.000 0.000 LGA R 98 R 98 27.190 0 0.093 1.124 29.039 0.000 0.000 LGA G 99 G 99 28.546 0 0.583 0.583 28.546 0.000 0.000 LGA W 100 W 100 23.518 0 0.077 0.254 29.043 0.000 0.000 LGA E 101 E 101 20.817 0 0.167 0.349 26.897 0.000 0.000 LGA C 102 C 102 16.183 0 0.085 0.799 17.642 0.000 0.000 LGA T 103 T 103 14.092 0 0.155 1.237 15.083 0.000 0.000 LGA K 104 K 104 9.652 0 0.069 1.284 11.150 0.357 9.788 LGA D 105 D 105 10.543 0 0.117 0.820 11.915 0.000 0.000 LGA R 106 R 106 13.560 0 0.279 0.842 15.949 0.000 0.000 LGA C 107 C 107 12.666 0 0.595 0.528 14.910 0.000 0.000 LGA G 108 G 108 11.110 0 0.026 0.026 13.733 0.000 0.000 LGA E 109 E 109 15.770 0 0.076 1.210 20.651 0.000 0.000 LGA V 110 V 110 18.343 0 0.084 1.128 22.485 0.000 0.000 LGA R 111 R 111 18.591 0 0.068 1.545 22.305 0.000 0.000 LGA N 112 N 112 24.972 0 0.125 1.291 30.454 0.000 0.000 LGA E 113 E 113 25.932 0 0.191 0.477 26.056 0.000 0.000 LGA E 114 E 114 27.127 0 0.249 0.943 35.855 0.000 0.000 LGA N 115 N 115 21.397 0 0.065 0.413 23.241 0.000 0.000 LGA A 116 A 116 17.449 0 0.536 0.551 18.764 0.000 0.000 LGA C 117 C 117 12.519 0 0.246 0.761 14.162 0.000 0.000 LGA H 118 H 118 6.221 0 0.063 1.291 8.424 19.881 23.333 LGA C 119 C 119 1.079 0 0.309 0.451 3.365 80.476 74.127 LGA S 120 S 120 1.203 0 0.607 0.778 4.001 70.833 73.095 LGA E 121 E 121 2.760 0 0.285 0.872 6.634 52.262 37.937 LGA D 122 D 122 3.047 0 0.712 1.218 5.186 44.167 48.393 LGA C 123 C 123 5.939 0 0.297 0.733 8.976 25.476 18.254 LGA L 124 L 124 3.528 0 0.271 0.302 9.656 59.881 34.226 LGA S 125 S 125 2.640 0 0.541 0.872 4.811 52.857 48.651 LGA R 126 R 126 3.854 0 0.158 1.397 14.031 48.452 20.476 LGA G 127 G 127 3.154 0 0.310 0.310 3.154 59.286 59.286 LGA D 128 D 128 2.856 0 0.297 1.378 4.848 57.262 51.369 LGA C 129 C 129 4.565 0 0.683 0.678 5.527 38.929 33.889 LGA C 130 C 130 4.380 0 0.554 0.666 8.868 49.048 36.032 LGA T 131 T 131 2.480 0 0.657 0.969 5.775 50.595 44.898 LGA N 132 N 132 3.386 0 0.140 1.293 5.457 55.714 46.190 LGA Y 133 Y 133 2.019 0 0.527 0.772 6.876 75.357 43.333 LGA Q 134 Q 134 1.170 0 0.234 0.819 8.338 69.286 43.280 LGA V 135 V 135 7.193 0 0.593 0.673 10.954 9.405 5.986 LGA V 136 V 136 12.833 0 0.551 0.562 17.123 0.000 0.000 LGA C 137 C 137 12.317 0 0.149 0.188 14.583 0.000 0.000 LGA K 138 K 138 14.170 0 0.586 0.988 18.425 0.000 0.000 LGA G 139 G 139 18.862 0 0.752 0.752 19.425 0.000 0.000 LGA E 140 E 140 19.390 0 0.285 0.404 21.202 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.834 8.784 9.352 20.434 16.723 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 14 2.86 32.222 28.075 0.474 LGA_LOCAL RMSD: 2.855 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.859 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.834 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.211060 * X + -0.970481 * Y + 0.116704 * Z + 20.727329 Y_new = 0.172685 * X + 0.080495 * Y + 0.981682 * Z + 51.454498 Z_new = -0.962098 * X + 0.227347 * Y + 0.150599 * Z + -31.745352 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.455864 1.294595 0.985742 [DEG: 140.7106 74.1749 56.4789 ] ZXZ: 3.023266 1.419623 -1.338750 [DEG: 173.2204 81.3384 -76.7047 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS333_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS333_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 14 2.86 28.075 8.83 REMARK ---------------------------------------------------------- MOLECULE T0543TS333_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 1ulk_A ATOM 728 N THR 96 18.072 82.192 -17.470 1.00 0.00 N ATOM 729 CA THR 96 17.295 81.487 -16.451 1.00 0.00 C ATOM 730 CB THR 96 17.136 79.982 -16.682 1.00 0.00 C ATOM 731 OG1 THR 96 16.921 79.699 -18.060 1.00 0.00 O ATOM 732 CG2 THR 96 15.896 79.441 -15.958 1.00 0.00 C ATOM 733 C THR 96 17.822 81.786 -15.066 1.00 0.00 C ATOM 734 O THR 96 17.888 80.947 -14.173 1.00 0.00 O ATOM 735 N ALA 97 18.218 83.047 -14.832 1.00 0.00 N ATOM 736 CA ALA 97 18.987 83.435 -13.673 1.00 0.00 C ATOM 737 CB ALA 97 19.871 84.629 -14.061 1.00 0.00 C ATOM 738 C ALA 97 18.141 83.759 -12.442 1.00 0.00 C ATOM 739 O ALA 97 18.300 84.804 -11.814 1.00 0.00 O ATOM 740 N ARG 98 17.224 82.840 -12.078 1.00 0.00 N ATOM 741 CA ARG 98 16.384 82.943 -10.895 1.00 0.00 C ATOM 742 CB ARG 98 15.053 83.719 -11.134 1.00 0.00 C ATOM 743 CG ARG 98 15.270 85.242 -11.269 1.00 0.00 C ATOM 744 CD ARG 98 14.062 86.133 -10.960 1.00 0.00 C ATOM 745 NE ARG 98 12.939 85.796 -11.895 1.00 0.00 N ATOM 746 CZ ARG 98 12.811 86.192 -13.168 1.00 0.00 C ATOM 747 NH1 ARG 98 13.728 86.937 -13.781 1.00 0.00 H ATOM 748 NH2 ARG 98 11.716 85.840 -13.835 1.00 0.00 H ATOM 749 C ARG 98 16.089 81.561 -10.323 1.00 0.00 C ATOM 750 O ARG 98 15.116 81.362 -9.606 1.00 0.00 O ATOM 751 N GLY 99 16.956 80.552 -10.579 1.00 0.00 N ATOM 752 CA GLY 99 16.795 79.186 -10.052 1.00 0.00 C ATOM 753 C GLY 99 16.844 79.050 -8.543 1.00 0.00 C ATOM 754 O GLY 99 16.261 78.139 -7.963 1.00 0.00 O ATOM 755 N TRP 100 17.529 79.989 -7.868 1.00 0.00 N ATOM 756 CA TRP 100 17.581 80.087 -6.421 1.00 0.00 C ATOM 757 CB TRP 100 19.035 80.238 -5.909 1.00 0.00 C ATOM 758 CG TRP 100 19.901 79.013 -6.103 1.00 0.00 C ATOM 759 CD1 TRP 100 20.943 78.802 -6.962 1.00 0.00 C ATOM 760 NE1 TRP 100 21.462 77.539 -6.778 1.00 0.00 N ATOM 761 CE2 TRP 100 20.753 76.914 -5.779 1.00 0.00 C ATOM 762 CD2 TRP 100 19.769 77.814 -5.321 1.00 0.00 C ATOM 763 CE3 TRP 100 18.900 77.469 -4.289 1.00 0.00 C ATOM 764 CZ3 TRP 100 19.019 76.187 -3.733 1.00 0.00 C ATOM 765 CZ2 TRP 100 20.877 75.648 -5.224 1.00 0.00 C ATOM 766 CH2 TRP 100 19.993 75.287 -4.194 1.00 0.00 H ATOM 767 C TRP 100 16.753 81.272 -5.937 1.00 0.00 C ATOM 768 O TRP 100 16.959 81.789 -4.843 1.00 0.00 O ATOM 769 N GLU 101 15.785 81.730 -6.758 1.00 0.00 N ATOM 770 CA GLU 101 14.869 82.798 -6.431 1.00 0.00 C ATOM 771 CB GLU 101 15.177 84.120 -7.182 1.00 0.00 C ATOM 772 CG GLU 101 16.550 84.723 -6.787 1.00 0.00 C ATOM 773 CD GLU 101 16.772 86.158 -7.241 1.00 0.00 C ATOM 774 OE1 GLU 101 15.946 86.717 -8.003 1.00 0.00 O ATOM 775 OE2 GLU 101 17.790 86.746 -6.776 1.00 0.00 O ATOM 776 C GLU 101 13.446 82.315 -6.693 1.00 0.00 C ATOM 777 O GLU 101 13.227 81.179 -7.106 1.00 0.00 O ATOM 778 N CYS 102 12.436 83.152 -6.368 1.00 0.00 N ATOM 779 CA CYS 102 11.041 82.756 -6.186 1.00 0.00 C ATOM 780 CB CYS 102 10.853 81.446 -5.341 1.00 0.00 C ATOM 781 SG CYS 102 11.737 81.464 -3.739 1.00 0.00 S ATOM 782 C CYS 102 10.268 83.862 -5.475 1.00 0.00 C ATOM 783 O CYS 102 10.854 84.838 -5.006 1.00 0.00 O ATOM 784 N THR 103 8.930 83.689 -5.362 1.00 0.00 N ATOM 785 CA THR 103 8.003 84.392 -4.467 1.00 0.00 C ATOM 786 CB THR 103 8.170 84.059 -2.968 1.00 0.00 C ATOM 787 OG1 THR 103 6.920 84.128 -2.300 1.00 0.00 O ATOM 788 CG2 THR 103 9.174 84.954 -2.217 1.00 0.00 C ATOM 789 C THR 103 7.653 85.866 -4.745 1.00 0.00 C ATOM 790 O THR 103 7.979 86.432 -5.783 1.00 0.00 O ATOM 791 N LYS 104 6.850 86.477 -3.846 1.00 0.00 N ATOM 792 CA LYS 104 5.935 87.596 -4.060 1.00 0.00 C ATOM 793 CB LYS 104 5.249 87.968 -2.709 1.00 0.00 C ATOM 794 CG LYS 104 6.178 88.547 -1.621 1.00 0.00 C ATOM 795 CD LYS 104 5.493 88.865 -0.274 1.00 0.00 C ATOM 796 CE LYS 104 5.484 87.688 0.712 1.00 0.00 C ATOM 797 NZ LYS 104 5.116 88.124 2.071 1.00 0.00 N ATOM 798 C LYS 104 6.463 88.845 -4.771 1.00 0.00 C ATOM 799 O LYS 104 5.874 89.289 -5.753 1.00 0.00 O ATOM 800 N ASP 105 7.628 89.407 -4.382 1.00 0.00 N ATOM 801 CA ASP 105 8.120 90.653 -4.951 1.00 0.00 C ATOM 802 CB ASP 105 8.968 91.414 -3.896 1.00 0.00 C ATOM 803 CG ASP 105 8.068 92.208 -2.970 1.00 0.00 C ATOM 804 OD1 ASP 105 7.650 93.325 -3.380 1.00 0.00 O ATOM 805 OD2 ASP 105 7.796 91.753 -1.831 1.00 0.00 O ATOM 806 C ASP 105 8.954 90.372 -6.203 1.00 0.00 C ATOM 807 O ASP 105 9.516 91.274 -6.829 1.00 0.00 O ATOM 808 N ARG 106 8.984 89.098 -6.643 1.00 0.00 N ATOM 809 CA ARG 106 9.612 88.622 -7.857 1.00 0.00 C ATOM 810 CB ARG 106 10.865 87.771 -7.526 1.00 0.00 C ATOM 811 CG ARG 106 11.971 88.595 -6.835 1.00 0.00 C ATOM 812 CD ARG 106 13.251 87.827 -6.499 1.00 0.00 C ATOM 813 NE ARG 106 12.899 86.826 -5.441 1.00 0.00 N ATOM 814 CZ ARG 106 13.829 86.262 -4.656 1.00 0.00 C ATOM 815 NH1 ARG 106 14.975 86.868 -4.408 1.00 0.00 H ATOM 816 NH2 ARG 106 13.570 85.068 -4.133 1.00 0.00 H ATOM 817 C ARG 106 8.601 87.799 -8.646 1.00 0.00 C ATOM 818 O ARG 106 8.892 86.704 -9.116 1.00 0.00 O ATOM 819 N CYS 107 7.358 88.311 -8.775 1.00 0.00 N ATOM 820 CA CYS 107 6.311 87.800 -9.663 1.00 0.00 C ATOM 821 CB CYS 107 6.759 87.595 -11.142 1.00 0.00 C ATOM 822 SG CYS 107 7.367 89.127 -11.913 1.00 0.00 S ATOM 823 C CYS 107 5.607 86.545 -9.173 1.00 0.00 C ATOM 824 O CYS 107 4.768 85.980 -9.871 1.00 0.00 O ATOM 825 N GLY 108 5.877 86.104 -7.927 1.00 0.00 N ATOM 826 CA GLY 108 5.202 84.950 -7.344 1.00 0.00 C ATOM 827 C GLY 108 5.744 83.607 -7.762 1.00 0.00 C ATOM 828 O GLY 108 5.135 82.590 -7.440 1.00 0.00 O ATOM 829 N GLU 109 6.883 83.559 -8.481 1.00 0.00 N ATOM 830 CA GLU 109 7.406 82.364 -9.131 1.00 0.00 C ATOM 831 CB GLU 109 8.704 82.686 -9.923 1.00 0.00 C ATOM 832 CG GLU 109 8.512 83.771 -11.017 1.00 0.00 C ATOM 833 CD GLU 109 9.802 84.152 -11.735 1.00 0.00 C ATOM 834 OE1 GLU 109 10.801 84.503 -11.057 1.00 0.00 O ATOM 835 OE2 GLU 109 9.823 84.163 -12.996 1.00 0.00 O ATOM 836 C GLU 109 7.635 81.151 -8.219 1.00 0.00 C ATOM 837 O GLU 109 8.007 81.267 -7.046 1.00 0.00 O ATOM 838 N VAL 110 7.360 79.948 -8.769 1.00 0.00 N ATOM 839 CA VAL 110 7.294 78.674 -8.064 1.00 0.00 C ATOM 840 CB VAL 110 5.908 78.028 -8.236 1.00 0.00 C ATOM 841 CG1 VAL 110 5.727 76.758 -7.375 1.00 0.00 C ATOM 842 CG2 VAL 110 4.816 79.049 -7.837 1.00 0.00 C ATOM 843 C VAL 110 8.437 77.768 -8.537 1.00 0.00 C ATOM 844 O VAL 110 9.029 77.983 -9.592 1.00 0.00 O ATOM 845 N ARG 111 8.819 76.753 -7.729 1.00 0.00 N ATOM 846 CA ARG 111 10.068 76.020 -7.855 1.00 0.00 C ATOM 847 CB ARG 111 10.789 75.962 -6.483 1.00 0.00 C ATOM 848 CG ARG 111 11.020 77.338 -5.819 1.00 0.00 C ATOM 849 CD ARG 111 11.353 77.265 -4.321 1.00 0.00 C ATOM 850 NE ARG 111 10.260 76.512 -3.620 1.00 0.00 N ATOM 851 CZ ARG 111 9.041 76.965 -3.300 1.00 0.00 C ATOM 852 NH1 ARG 111 8.638 78.188 -3.609 1.00 0.00 H ATOM 853 NH2 ARG 111 8.241 76.147 -2.622 1.00 0.00 H ATOM 854 C ARG 111 9.855 74.566 -8.271 1.00 0.00 C ATOM 855 O ARG 111 8.948 73.882 -7.798 1.00 0.00 O ATOM 856 N ASN 112 10.724 74.053 -9.164 1.00 0.00 N ATOM 857 CA ASN 112 10.785 72.654 -9.560 1.00 0.00 C ATOM 858 CB ASN 112 11.702 72.470 -10.798 1.00 0.00 C ATOM 859 CG ASN 112 11.074 73.194 -11.986 1.00 0.00 C ATOM 860 OD1 ASN 112 10.116 72.689 -12.582 1.00 0.00 O ATOM 861 ND2 ASN 112 11.599 74.382 -12.349 1.00 0.00 N ATOM 862 C ASN 112 11.186 71.688 -8.439 1.00 0.00 C ATOM 863 O ASN 112 11.879 72.053 -7.491 1.00 0.00 O ATOM 864 N GLU 113 10.707 70.421 -8.522 1.00 0.00 N ATOM 865 CA GLU 113 11.119 69.308 -7.665 1.00 0.00 C ATOM 866 CB GLU 113 12.645 69.020 -7.698 1.00 0.00 C ATOM 867 CG GLU 113 13.225 68.651 -9.092 1.00 0.00 C ATOM 868 CD GLU 113 12.773 67.296 -9.607 1.00 0.00 C ATOM 869 OE1 GLU 113 13.210 66.267 -9.030 1.00 0.00 O ATOM 870 OE2 GLU 113 11.968 67.231 -10.575 1.00 0.00 O ATOM 871 C GLU 113 10.591 69.388 -6.230 1.00 0.00 C ATOM 872 O GLU 113 11.084 68.709 -5.333 1.00 0.00 O ATOM 873 N GLU 114 9.545 70.211 -5.996 1.00 0.00 N ATOM 874 CA GLU 114 8.811 70.335 -4.740 1.00 0.00 C ATOM 875 CB GLU 114 7.798 69.165 -4.531 1.00 0.00 C ATOM 876 CG GLU 114 6.806 69.003 -5.721 1.00 0.00 C ATOM 877 CD GLU 114 5.625 68.084 -5.431 1.00 0.00 C ATOM 878 OE1 GLU 114 4.786 68.463 -4.569 1.00 0.00 O ATOM 879 OE2 GLU 114 5.471 67.015 -6.087 1.00 0.00 O ATOM 880 C GLU 114 9.657 70.655 -3.489 1.00 0.00 C ATOM 881 O GLU 114 9.463 70.091 -2.412 1.00 0.00 O ATOM 882 N ASN 115 10.610 71.613 -3.608 1.00 0.00 N ATOM 883 CA ASN 115 11.443 72.105 -2.508 1.00 0.00 C ATOM 884 CB ASN 115 12.887 72.430 -2.974 1.00 0.00 C ATOM 885 CG ASN 115 13.660 71.129 -3.147 1.00 0.00 C ATOM 886 OD1 ASN 115 14.132 70.560 -2.160 1.00 0.00 O ATOM 887 ND2 ASN 115 13.804 70.644 -4.400 1.00 0.00 N ATOM 888 C ASN 115 10.851 73.332 -1.813 1.00 0.00 C ATOM 889 O ASN 115 9.936 73.990 -2.317 1.00 0.00 O ATOM 890 N ALA 116 11.362 73.663 -0.607 1.00 0.00 N ATOM 891 CA ALA 116 10.849 74.681 0.296 1.00 0.00 C ATOM 892 CB ALA 116 11.509 74.508 1.674 1.00 0.00 C ATOM 893 C ALA 116 10.998 76.141 -0.157 1.00 0.00 C ATOM 894 O ALA 116 11.737 76.460 -1.079 1.00 0.00 O ATOM 895 N CYS 117 10.244 77.065 0.475 1.00 0.00 N ATOM 896 CA CYS 117 10.263 78.494 0.207 1.00 0.00 C ATOM 897 CB CYS 117 8.857 79.001 -0.211 1.00 0.00 C ATOM 898 SG CYS 117 8.897 80.592 -1.118 1.00 0.00 S ATOM 899 C CYS 117 10.655 79.261 1.460 1.00 0.00 C ATOM 900 O CYS 117 9.909 79.328 2.433 1.00 0.00 O ATOM 901 N HIS 118 11.843 79.877 1.457 1.00 0.00 N ATOM 902 CA HIS 118 12.394 80.580 2.603 1.00 0.00 C ATOM 903 CB HIS 118 13.905 80.833 2.399 1.00 0.00 C ATOM 904 ND1 HIS 118 14.485 81.353 4.769 1.00 0.00 N ATOM 905 CG HIS 118 14.739 80.641 3.613 1.00 0.00 C ATOM 906 CE1 HIS 118 15.274 80.821 5.680 1.00 0.00 C ATOM 907 NE2 HIS 118 16.016 79.816 5.165 1.00 0.00 N ATOM 908 CD2 HIS 118 15.687 79.707 3.835 1.00 0.00 C ATOM 909 C HIS 118 11.733 81.916 2.925 1.00 0.00 C ATOM 910 O HIS 118 11.218 82.616 2.055 1.00 0.00 O ATOM 911 N CYS 119 11.808 82.347 4.200 1.00 0.00 N ATOM 912 CA CYS 119 11.584 83.726 4.612 1.00 0.00 C ATOM 913 CB CYS 119 11.408 83.913 6.146 1.00 0.00 C ATOM 914 SG CYS 119 12.270 82.691 7.191 1.00 0.00 S ATOM 915 C CYS 119 12.662 84.658 4.084 1.00 0.00 C ATOM 916 O CYS 119 12.371 85.791 3.716 1.00 0.00 O ATOM 917 N SER 120 13.920 84.188 3.957 1.00 0.00 N ATOM 918 CA SER 120 14.994 84.956 3.324 1.00 0.00 C ATOM 919 CB SER 120 16.419 84.438 3.669 1.00 0.00 C ATOM 920 OG SER 120 16.712 84.461 5.066 1.00 0.00 O ATOM 921 C SER 120 14.936 84.906 1.798 1.00 0.00 C ATOM 922 O SER 120 15.941 85.141 1.133 1.00 0.00 O ATOM 923 N GLU 121 13.759 84.603 1.203 1.00 0.00 N ATOM 924 CA GLU 121 13.522 84.617 -0.234 1.00 0.00 C ATOM 925 CB GLU 121 13.625 86.066 -0.806 1.00 0.00 C ATOM 926 CG GLU 121 12.601 87.097 -0.246 1.00 0.00 C ATOM 927 CD GLU 121 12.747 88.467 -0.919 1.00 0.00 C ATOM 928 OE1 GLU 121 12.740 88.511 -2.179 1.00 0.00 O ATOM 929 OE2 GLU 121 12.858 89.500 -0.207 1.00 0.00 O ATOM 930 C GLU 121 14.354 83.593 -1.044 1.00 0.00 C ATOM 931 O GLU 121 14.919 83.913 -2.089 1.00 0.00 O ATOM 932 N ASP 122 14.398 82.314 -0.603 1.00 0.00 N ATOM 933 CA ASP 122 15.339 81.292 -1.061 1.00 0.00 C ATOM 934 CB ASP 122 16.589 81.315 -0.124 1.00 0.00 C ATOM 935 CG ASP 122 17.827 80.620 -0.659 1.00 0.00 C ATOM 936 OD1 ASP 122 17.760 79.874 -1.670 1.00 0.00 O ATOM 937 OD2 ASP 122 18.905 80.791 -0.034 1.00 0.00 O ATOM 938 C ASP 122 14.624 79.926 -1.092 1.00 0.00 C ATOM 939 O ASP 122 13.448 79.826 -0.755 1.00 0.00 O ATOM 940 N CYS 123 15.300 78.851 -1.539 1.00 0.00 N ATOM 941 CA CYS 123 14.681 77.602 -1.967 1.00 0.00 C ATOM 942 CB CYS 123 15.074 77.311 -3.444 1.00 0.00 C ATOM 943 SG CYS 123 14.575 78.671 -4.565 1.00 0.00 S ATOM 944 C CYS 123 15.004 76.350 -1.134 1.00 0.00 C ATOM 945 O CYS 123 14.878 75.238 -1.634 1.00 0.00 O ATOM 946 N LEU 124 15.470 76.485 0.132 1.00 0.00 N ATOM 947 CA LEU 124 16.208 75.415 0.819 1.00 0.00 C ATOM 948 CB LEU 124 17.302 76.066 1.703 1.00 0.00 C ATOM 949 CG LEU 124 18.357 76.886 0.934 1.00 0.00 C ATOM 950 CD1 LEU 124 19.235 77.692 1.907 1.00 0.00 C ATOM 951 CD2 LEU 124 19.225 75.994 0.030 1.00 0.00 C ATOM 952 C LEU 124 15.446 74.322 1.617 1.00 0.00 C ATOM 953 O LEU 124 14.795 73.454 1.029 1.00 0.00 O ATOM 954 N SER 125 15.598 74.275 2.972 1.00 0.00 N ATOM 955 CA SER 125 15.508 73.016 3.737 1.00 0.00 C ATOM 956 CB SER 125 16.923 72.517 4.167 1.00 0.00 C ATOM 957 OG SER 125 17.803 72.409 3.045 1.00 0.00 O ATOM 958 C SER 125 14.574 73.017 4.964 1.00 0.00 C ATOM 959 O SER 125 13.443 73.484 4.914 1.00 0.00 O ATOM 960 N ARG 126 14.989 72.395 6.098 1.00 0.00 N ATOM 961 CA ARG 126 14.096 71.947 7.163 1.00 0.00 C ATOM 962 CB ARG 126 14.797 70.823 7.972 1.00 0.00 C ATOM 963 CG ARG 126 13.879 69.655 8.398 1.00 0.00 C ATOM 964 CD ARG 126 13.155 69.772 9.751 1.00 0.00 C ATOM 965 NE ARG 126 14.167 69.756 10.865 1.00 0.00 N ATOM 966 CZ ARG 126 14.893 68.697 11.241 1.00 0.00 C ATOM 967 NH1 ARG 126 14.751 67.474 10.747 1.00 0.00 H ATOM 968 NH2 ARG 126 15.812 68.849 12.192 1.00 0.00 H ATOM 969 C ARG 126 13.507 73.005 8.095 1.00 0.00 C ATOM 970 O ARG 126 12.323 72.959 8.432 1.00 0.00 O ATOM 971 N GLY 127 14.300 73.999 8.559 1.00 0.00 N ATOM 972 CA GLY 127 13.781 75.061 9.438 1.00 0.00 C ATOM 973 C GLY 127 13.172 76.182 8.639 1.00 0.00 C ATOM 974 O GLY 127 12.303 76.927 9.089 1.00 0.00 O ATOM 975 N ASP 128 13.603 76.247 7.375 1.00 0.00 N ATOM 976 CA ASP 128 13.185 77.066 6.266 1.00 0.00 C ATOM 977 CB ASP 128 14.087 76.717 5.036 1.00 0.00 C ATOM 978 CG ASP 128 15.552 76.446 5.367 1.00 0.00 C ATOM 979 OD1 ASP 128 15.866 75.568 6.227 1.00 0.00 O ATOM 980 OD2 ASP 128 16.432 77.061 4.727 1.00 0.00 O ATOM 981 C ASP 128 11.700 76.825 5.977 1.00 0.00 C ATOM 982 O ASP 128 10.947 77.738 5.643 1.00 0.00 O ATOM 983 N CYS 129 11.244 75.568 6.188 1.00 0.00 N ATOM 984 CA CYS 129 9.849 75.166 6.121 1.00 0.00 C ATOM 985 CB CYS 129 9.704 73.614 6.126 1.00 0.00 C ATOM 986 SG CYS 129 10.297 72.832 4.593 1.00 0.00 S ATOM 987 C CYS 129 8.956 75.678 7.254 1.00 0.00 C ATOM 988 O CYS 129 7.736 75.569 7.170 1.00 0.00 O ATOM 989 N CYS 130 9.489 76.201 8.378 1.00 0.00 N ATOM 990 CA CYS 130 8.676 76.287 9.585 1.00 0.00 C ATOM 991 CB CYS 130 9.515 75.952 10.845 1.00 0.00 C ATOM 992 SG CYS 130 10.198 74.257 10.809 1.00 0.00 S ATOM 993 C CYS 130 7.950 77.608 9.831 1.00 0.00 C ATOM 994 O CYS 130 6.718 77.661 9.814 1.00 0.00 O ATOM 995 N THR 131 8.664 78.717 10.091 1.00 0.00 N ATOM 996 CA THR 131 8.032 79.952 10.571 1.00 0.00 C ATOM 997 CB THR 131 8.562 80.452 11.911 1.00 0.00 C ATOM 998 OG1 THR 131 8.352 79.466 12.913 1.00 0.00 O ATOM 999 CG2 THR 131 7.816 81.703 12.408 1.00 0.00 C ATOM 1000 C THR 131 8.233 81.035 9.547 1.00 0.00 C ATOM 1001 O THR 131 9.349 81.232 9.067 1.00 0.00 O ATOM 1002 N ASN 132 7.129 81.737 9.182 1.00 0.00 N ATOM 1003 CA ASN 132 7.042 82.748 8.131 1.00 0.00 C ATOM 1004 CB ASN 132 8.185 83.805 8.115 1.00 0.00 C ATOM 1005 CG ASN 132 8.319 84.537 9.439 1.00 0.00 C ATOM 1006 OD1 ASN 132 7.488 85.377 9.788 1.00 0.00 O ATOM 1007 ND2 ASN 132 9.415 84.267 10.185 1.00 0.00 N ATOM 1008 C ASN 132 6.917 82.094 6.759 1.00 0.00 C ATOM 1009 O ASN 132 7.402 82.616 5.756 1.00 0.00 O ATOM 1010 N TYR 133 6.281 80.905 6.701 1.00 0.00 N ATOM 1011 CA TYR 133 6.192 80.096 5.503 1.00 0.00 C ATOM 1012 CB TYR 133 5.791 78.633 5.842 1.00 0.00 C ATOM 1013 CG TYR 133 6.288 77.748 4.742 1.00 0.00 C ATOM 1014 CD1 TYR 133 7.670 77.587 4.571 1.00 0.00 C ATOM 1015 CE1 TYR 133 8.176 76.966 3.424 1.00 0.00 C ATOM 1016 CZ TYR 133 7.301 76.495 2.451 1.00 0.00 C ATOM 1017 OH TYR 133 7.824 75.872 1.309 1.00 0.00 H ATOM 1018 CD2 TYR 133 5.413 77.260 3.763 1.00 0.00 C ATOM 1019 CE2 TYR 133 5.921 76.649 2.609 1.00 0.00 C ATOM 1020 C TYR 133 5.315 80.673 4.388 1.00 0.00 C ATOM 1021 O TYR 133 4.382 81.432 4.629 1.00 0.00 O ATOM 1022 N GLN 134 5.641 80.332 3.119 1.00 0.00 N ATOM 1023 CA GLN 134 4.998 80.905 1.952 1.00 0.00 C ATOM 1024 CB GLN 134 6.020 81.732 1.136 1.00 0.00 C ATOM 1025 CG GLN 134 6.703 82.806 2.024 1.00 0.00 C ATOM 1026 CD GLN 134 7.468 83.853 1.221 1.00 0.00 C ATOM 1027 OE1 GLN 134 6.920 84.517 0.339 1.00 0.00 O ATOM 1028 NE2 GLN 134 8.773 84.035 1.515 1.00 0.00 N ATOM 1029 C GLN 134 4.207 79.898 1.106 1.00 0.00 C ATOM 1030 O GLN 134 2.986 79.839 1.225 1.00 0.00 O ATOM 1031 N VAL 135 4.835 79.105 0.199 1.00 0.00 N ATOM 1032 CA VAL 135 4.100 78.245 -0.743 1.00 0.00 C ATOM 1033 CB VAL 135 3.918 78.874 -2.140 1.00 0.00 C ATOM 1034 CG1 VAL 135 2.925 78.048 -2.987 1.00 0.00 C ATOM 1035 CG2 VAL 135 3.377 80.315 -2.035 1.00 0.00 C ATOM 1036 C VAL 135 4.821 76.906 -0.918 1.00 0.00 C ATOM 1037 O VAL 135 6.037 76.882 -1.113 1.00 0.00 O ATOM 1038 N VAL 136 4.068 75.777 -0.867 1.00 0.00 N ATOM 1039 CA VAL 136 4.483 74.370 -0.916 1.00 0.00 C ATOM 1040 CB VAL 136 5.380 73.944 -2.082 1.00 0.00 C ATOM 1041 CG1 VAL 136 5.478 72.403 -2.144 1.00 0.00 C ATOM 1042 CG2 VAL 136 4.818 74.480 -3.414 1.00 0.00 C ATOM 1043 C VAL 136 5.030 73.887 0.421 1.00 0.00 C ATOM 1044 O VAL 136 6.227 73.914 0.675 1.00 0.00 O ATOM 1045 N CYS 137 4.146 73.466 1.345 1.00 0.00 N ATOM 1046 CA CYS 137 4.440 73.455 2.776 1.00 0.00 C ATOM 1047 CB CYS 137 3.187 73.969 3.534 1.00 0.00 C ATOM 1048 SG CYS 137 2.452 75.452 2.755 1.00 0.00 S ATOM 1049 C CYS 137 4.809 72.106 3.378 1.00 0.00 C ATOM 1050 O CYS 137 4.907 71.958 4.594 1.00 0.00 O ATOM 1051 N LYS 138 4.999 71.073 2.546 1.00 0.00 N ATOM 1052 CA LYS 138 5.121 69.696 2.985 1.00 0.00 C ATOM 1053 CB LYS 138 4.583 68.762 1.875 1.00 0.00 C ATOM 1054 CG LYS 138 3.076 68.917 1.609 1.00 0.00 C ATOM 1055 CD LYS 138 2.642 68.069 0.402 1.00 0.00 C ATOM 1056 CE LYS 138 1.127 67.998 0.190 1.00 0.00 C ATOM 1057 NZ LYS 138 0.820 67.165 -0.988 1.00 0.00 N ATOM 1058 C LYS 138 6.540 69.250 3.342 1.00 0.00 C ATOM 1059 O LYS 138 7.536 69.745 2.820 1.00 0.00 O ATOM 1060 N GLY 139 6.648 68.254 4.246 1.00 0.00 N ATOM 1061 CA GLY 139 7.897 67.590 4.585 1.00 0.00 C ATOM 1062 C GLY 139 7.602 66.610 5.685 1.00 0.00 C ATOM 1063 O GLY 139 6.522 66.641 6.270 1.00 0.00 O ATOM 1064 N GLU 140 8.545 65.703 6.007 1.00 0.00 N ATOM 1065 CA GLU 140 8.382 64.786 7.125 1.00 0.00 C ATOM 1066 CB GLU 140 8.964 63.377 6.819 1.00 0.00 C ATOM 1067 CG GLU 140 8.181 62.671 5.676 1.00 0.00 C ATOM 1068 CD GLU 140 8.637 61.255 5.351 1.00 0.00 C ATOM 1069 OE1 GLU 140 9.592 60.723 5.975 1.00 0.00 O ATOM 1070 OE2 GLU 140 8.006 60.634 4.454 1.00 0.00 O ATOM 1071 C GLU 140 8.976 65.429 8.371 1.00 0.00 C ATOM 1072 O GLU 140 10.194 65.480 8.567 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 84.81 34.1 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 89.33 30.6 62 100.0 62 ARMSMC BURIED . . . . . . . . 72.88 42.3 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.59 48.7 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 89.66 47.2 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 81.74 61.5 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 100.90 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 51.98 69.6 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 41.95 77.8 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 44.72 75.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 65.64 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.62 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 77.02 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 77.95 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 80.82 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 98.48 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 98.48 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 119.65 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 21.54 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.83 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.83 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1963 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 9.19 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.90 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.89 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.25 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.96 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.99 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 9.94 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 10.78 112 100.0 112 CRMSSC BURIED . . . . . . . . 8.07 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.38 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 9.93 240 100.0 240 CRMSALL BURIED . . . . . . . . 7.98 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.065 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 8.379 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 7.294 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.099 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 8.426 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 7.313 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.039 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 8.899 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 9.826 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 7.378 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.503 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 9.025 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 7.311 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 9 32 45 45 DISTCA CA (P) 0.00 0.00 4.44 20.00 71.11 45 DISTCA CA (RMS) 0.00 0.00 2.73 3.84 6.50 DISTCA ALL (N) 0 6 17 56 245 345 345 DISTALL ALL (P) 0.00 1.74 4.93 16.23 71.01 345 DISTALL ALL (RMS) 0.00 1.70 2.30 3.54 6.80 DISTALL END of the results output