####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 46 ( 184), selected 46 , name T0543TS328_1_5-D4 # Molecule2: number of CA atoms 312 ( 2539), selected 46 , name T0543-D4.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS328_1_5-D4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 853 - 875 4.94 12.22 LCS_AVERAGE: 6.84 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 847 - 857 1.87 20.85 LONGEST_CONTINUOUS_SEGMENT: 11 848 - 858 1.86 20.46 LCS_AVERAGE: 2.47 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 839 - 847 0.27 25.01 LCS_AVERAGE: 1.90 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 46 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT W 839 W 839 9 9 14 9 9 9 9 9 9 10 10 10 11 13 14 16 16 17 18 19 21 21 22 LCS_GDT V 840 V 840 9 9 14 9 9 9 9 9 9 10 10 10 11 13 14 16 16 17 18 20 21 21 31 LCS_GDT E 841 E 841 9 9 19 9 9 9 9 9 9 10 10 12 12 13 14 16 16 18 18 20 29 30 32 LCS_GDT E 842 E 842 9 9 19 9 9 9 9 9 9 10 10 12 12 14 14 17 23 24 27 31 34 36 38 LCS_GDT L 843 L 843 9 9 19 9 9 9 9 9 9 10 10 12 15 19 21 23 26 31 34 35 36 38 40 LCS_GDT M 844 M 844 9 9 19 9 9 9 9 9 9 10 10 12 15 19 21 26 29 33 34 35 36 38 40 LCS_GDT K 845 K 845 9 9 19 9 9 9 9 9 9 10 11 14 15 19 21 26 29 33 34 35 36 38 40 LCS_GDT M 846 M 846 9 9 19 9 9 9 9 10 11 12 14 14 15 21 23 26 29 33 34 35 36 38 40 LCS_GDT H 847 H 847 9 11 19 9 9 9 9 9 10 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT T 848 T 848 7 11 19 5 7 9 9 10 10 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT A 849 A 849 7 11 19 5 7 9 9 10 11 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT R 850 R 850 8 11 19 5 7 9 9 10 11 12 14 14 15 16 18 18 20 21 27 30 36 37 40 LCS_GDT V 851 V 851 8 11 19 5 7 9 9 10 11 12 14 14 15 16 18 18 20 24 28 35 36 38 40 LCS_GDT R 852 R 852 8 11 19 5 7 9 9 10 11 12 14 14 15 16 18 18 20 22 26 29 36 36 40 LCS_GDT D 853 D 853 8 11 23 3 7 9 9 10 11 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT I 854 I 854 8 11 23 4 7 9 9 10 11 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT E 855 E 855 8 11 23 4 7 9 9 10 11 12 14 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT H 856 H 856 8 11 23 4 7 9 9 10 11 12 14 14 17 21 21 26 29 33 34 35 36 38 40 LCS_GDT L 857 L 857 8 11 23 4 7 8 9 10 11 12 14 14 15 16 18 23 28 33 34 35 36 38 40 LCS_GDT T 858 T 858 4 11 23 3 4 4 6 9 11 12 14 14 15 21 23 26 29 33 34 35 36 38 40 LCS_GDT G 859 G 859 4 10 23 3 4 4 5 9 10 12 14 14 16 21 23 26 29 33 34 35 36 38 40 LCS_GDT L 860 L 860 4 5 23 3 4 4 5 5 6 8 9 13 15 19 23 26 29 33 34 35 36 38 40 LCS_GDT D 861 D 861 4 5 23 3 4 4 5 5 6 8 9 11 15 21 23 26 29 33 34 35 36 38 40 LCS_GDT F 862 F 862 4 5 23 3 4 4 5 5 6 8 9 10 15 19 21 23 29 33 34 35 36 38 40 LCS_GDT Y 863 Y 863 4 6 23 3 3 4 4 5 6 8 10 10 13 18 19 23 25 26 32 34 36 38 40 LCS_GDT R 864 R 864 4 6 23 3 3 4 4 5 6 8 9 12 15 19 23 26 29 33 34 35 36 38 40 LCS_GDT K 865 K 865 4 6 23 3 4 4 5 7 7 8 10 12 15 19 22 26 29 33 34 35 36 38 40 LCS_GDT T 866 T 866 4 6 23 3 4 4 5 7 7 8 13 14 15 19 23 26 29 33 34 35 36 38 40 LCS_GDT S 867 S 867 4 6 23 3 4 4 6 7 8 9 13 14 17 19 23 26 29 33 34 35 36 38 40 LCS_GDT R 868 R 868 4 6 23 1 4 4 6 7 8 10 12 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT S 869 S 869 4 6 23 4 4 5 6 7 9 10 13 14 17 21 21 25 29 33 34 35 36 38 40 LCS_GDT Y 870 Y 870 4 6 23 4 4 4 6 7 7 10 11 14 17 21 21 25 29 33 34 35 36 38 40 LCS_GDT S 871 S 871 4 6 23 4 4 5 6 7 7 10 12 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT E 872 E 872 4 6 23 4 4 5 6 7 9 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT I 873 I 873 3 7 23 3 3 5 6 7 9 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT L 874 L 874 6 7 23 4 6 6 6 7 8 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT T 875 T 875 6 7 23 4 6 6 6 7 9 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT L 876 L 876 6 7 22 4 6 6 6 7 8 10 13 14 15 19 23 26 29 33 34 35 36 38 40 LCS_GDT K 877 K 877 6 7 22 4 6 6 6 7 9 10 13 14 15 17 19 23 29 33 34 35 36 38 40 LCS_GDT T 878 T 878 6 7 22 3 6 6 6 7 9 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT Y 879 Y 879 6 7 22 3 6 6 6 7 9 10 13 14 17 21 23 26 29 33 34 35 36 38 40 LCS_GDT L 880 L 880 3 4 22 3 3 3 4 7 9 10 13 14 15 19 21 26 29 33 34 35 36 38 40 LCS_GDT H 881 H 881 3 4 22 3 3 3 4 7 9 10 13 14 15 19 21 23 25 28 32 35 36 38 40 LCS_GDT T 882 T 882 3 3 22 3 3 3 5 7 9 10 13 14 15 19 21 23 27 30 33 35 36 38 40 LCS_GDT Y 883 Y 883 3 3 22 3 3 3 3 4 4 6 11 12 13 18 19 20 22 22 22 25 27 30 36 LCS_GDT E 884 E 884 3 3 21 3 3 3 3 4 4 5 7 7 10 13 16 17 19 19 21 22 25 27 28 LCS_AVERAGE LCS_A: 3.74 ( 1.90 2.47 6.84 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 9 9 9 10 11 12 14 14 17 21 23 26 29 33 34 35 36 38 40 GDT PERCENT_AT 2.88 2.88 2.88 2.88 3.21 3.53 3.85 4.49 4.49 5.45 6.73 7.37 8.33 9.29 10.58 10.90 11.22 11.54 12.18 12.82 GDT RMS_LOCAL 0.27 0.27 0.27 0.27 1.31 1.81 2.04 2.50 2.50 3.66 4.22 4.78 5.07 5.32 5.66 5.77 5.92 6.06 6.35 6.60 GDT RMS_ALL_AT 25.01 25.01 25.01 25.01 20.74 20.63 20.94 20.40 20.40 9.70 9.35 8.87 8.67 8.57 8.52 8.48 8.34 8.32 8.24 8.27 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA W 839 W 839 19.908 10 0.116 0.116 22.024 0.000 0.000 LGA V 840 V 840 18.085 3 0.026 0.026 19.462 0.000 0.000 LGA E 841 E 841 15.552 5 0.032 0.032 16.821 0.000 0.000 LGA E 842 E 842 12.461 5 0.137 0.137 14.117 1.190 0.529 LGA L 843 L 843 9.459 4 0.040 0.040 10.808 6.429 3.214 LGA M 844 M 844 7.547 4 0.049 0.049 8.872 18.690 9.345 LGA K 845 K 845 6.509 5 0.055 0.055 6.656 21.071 9.365 LGA M 846 M 846 2.250 4 0.193 0.193 3.771 57.738 28.869 LGA H 847 H 847 3.649 6 0.102 0.102 5.564 43.214 17.286 LGA T 848 T 848 3.925 3 0.666 0.666 3.925 50.357 28.776 LGA A 849 A 849 2.389 1 0.050 0.050 2.901 64.881 51.905 LGA R 850 R 850 1.713 7 0.095 0.095 1.713 75.000 27.273 LGA V 851 V 851 2.245 3 0.077 0.077 2.245 68.810 39.320 LGA R 852 R 852 1.683 7 0.148 0.148 1.808 75.000 27.273 LGA D 853 D 853 1.158 4 0.038 0.038 1.278 81.429 40.714 LGA I 854 I 854 0.992 4 0.106 0.106 1.193 85.952 42.976 LGA E 855 E 855 0.578 5 0.158 0.158 0.658 90.476 40.212 LGA H 856 H 856 1.239 6 0.094 0.094 1.339 81.429 32.571 LGA L 857 L 857 2.589 4 0.265 0.265 3.199 59.167 29.583 LGA T 858 T 858 3.561 3 0.495 0.495 3.561 57.500 32.857 LGA G 859 G 859 3.734 0 0.534 0.534 6.609 32.024 32.024 LGA L 860 L 860 9.085 4 0.115 0.115 12.328 3.690 1.845 LGA D 861 D 861 16.065 4 0.625 0.625 19.193 0.000 0.000 LGA F 862 F 862 20.742 7 0.601 0.601 23.157 0.000 0.000 LGA Y 863 Y 863 22.867 8 0.414 0.414 25.440 0.000 0.000 LGA R 864 R 864 25.000 7 0.399 0.399 28.422 0.000 0.000 LGA K 865 K 865 31.156 5 0.039 0.039 33.274 0.000 0.000 LGA T 866 T 866 33.390 3 0.160 0.160 36.726 0.000 0.000 LGA S 867 S 867 39.805 2 0.692 0.692 39.805 0.000 0.000 LGA R 868 R 868 39.977 7 0.647 0.647 39.977 0.000 0.000 LGA S 869 S 869 38.427 2 0.622 0.622 39.355 0.000 0.000 LGA Y 870 Y 870 31.423 8 0.044 0.044 34.224 0.000 0.000 LGA S 871 S 871 33.264 2 0.023 0.023 33.382 0.000 0.000 LGA E 872 E 872 35.134 5 0.331 0.331 35.134 0.000 0.000 LGA I 873 I 873 30.766 4 0.640 0.640 32.403 0.000 0.000 LGA L 874 L 874 26.559 4 0.608 0.608 28.526 0.000 0.000 LGA T 875 T 875 24.583 3 0.087 0.087 25.509 0.000 0.000 LGA L 876 L 876 22.085 4 0.017 0.017 23.308 0.000 0.000 LGA K 877 K 877 22.642 5 0.193 0.193 22.710 0.000 0.000 LGA T 878 T 878 21.225 3 0.176 0.176 22.018 0.000 0.000 LGA Y 879 Y 879 17.892 8 0.663 0.663 19.197 0.000 0.000 LGA L 880 L 880 17.930 4 0.613 0.613 19.099 0.000 0.000 LGA H 881 H 881 17.505 6 0.580 0.580 17.505 0.000 0.000 LGA T 882 T 882 15.544 3 0.141 0.141 16.475 0.000 0.000 LGA Y 883 Y 883 17.457 8 0.192 0.192 20.722 0.000 0.000 LGA E 884 E 884 23.479 5 0.015 0.015 25.511 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 46 184 184 100.00 398 184 46.23 312 SUMMARY(RMSD_GDC): 8.016 7.845 7.845 3.122 1.590 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 46 312 4.0 14 2.50 5.288 4.352 0.538 LGA_LOCAL RMSD: 2.504 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.399 Number of assigned atoms: 46 Std_ASGN_ATOMS RMSD: 8.016 Standard rmsd on all 46 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.265889 * X + 0.519452 * Y + -0.812079 * Z + -9.680948 Y_new = -0.962886 * X + 0.183670 * Y + -0.197780 * Z + 39.521641 Z_new = 0.046417 * X + 0.834527 * Y + 0.549009 * Z + 83.028023 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.301373 -0.046434 0.988910 [DEG: -74.5632 -2.6605 56.6604 ] ZXZ: -1.331900 0.989619 0.055564 [DEG: -76.3122 56.7010 3.1836 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS328_1_5-D4 REMARK 2: T0543-D4.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS328_1_5-D4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 46 312 4.0 14 2.50 4.352 8.02 REMARK ---------------------------------------------------------- MOLECULE T0543TS328_1_5-D4 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 5 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 2vso_E ATOM 3257 N TRP 839 -2.955 42.957 44.568 1.00 3.00 N ATOM 3258 CA TRP 839 -3.348 44.348 44.454 1.00 3.00 C ATOM 3259 C TRP 839 -4.378 44.553 43.348 1.00 3.00 C ATOM 3260 O TRP 839 -5.324 45.321 43.510 1.00 3.00 O ATOM 3261 N VAL 840 -4.190 43.849 42.240 1.00 3.00 N ATOM 3262 CA VAL 840 -5.196 43.796 41.197 1.00 3.00 C ATOM 3263 C VAL 840 -6.541 43.429 41.805 1.00 3.00 C ATOM 3264 O VAL 840 -7.569 44.042 41.476 1.00 3.00 O ATOM 3265 N GLU 841 -6.528 42.408 42.674 1.00 3.00 N ATOM 3266 CA GLU 841 -7.742 41.847 43.245 1.00 3.00 C ATOM 3267 C GLU 841 -8.496 42.851 44.095 1.00 3.00 C ATOM 3268 O GLU 841 -9.716 42.840 44.156 1.00 3.00 O ATOM 3269 N GLU 842 -7.753 43.726 44.753 1.00 3.00 N ATOM 3270 CA GLU 842 -8.328 44.810 45.536 1.00 3.00 C ATOM 3271 C GLU 842 -8.779 46.028 44.717 1.00 3.00 C ATOM 3272 O GLU 842 -9.631 46.788 45.154 1.00 3.00 O ATOM 3273 N LEU 843 -8.210 46.209 43.533 1.00 3.00 N ATOM 3274 CA LEU 843 -8.637 47.270 42.638 1.00 3.00 C ATOM 3275 C LEU 843 -9.897 46.835 41.903 1.00 3.00 C ATOM 3276 O LEU 843 -10.847 47.591 41.761 1.00 3.00 O ATOM 3277 N MET 844 -9.878 45.601 41.422 1.00 3.00 N ATOM 3278 CA MET 844 -11.019 45.022 40.743 1.00 3.00 C ATOM 3279 C MET 844 -12.248 45.088 41.637 1.00 3.00 C ATOM 3280 O MET 844 -13.334 45.428 41.184 1.00 3.00 O ATOM 3281 N LYS 845 -12.057 44.783 42.916 1.00 3.00 N ATOM 3282 CA LYS 845 -13.159 44.717 43.864 1.00 3.00 C ATOM 3283 C LYS 845 -13.836 46.065 44.116 1.00 3.00 C ATOM 3284 O LYS 845 -15.019 46.123 44.438 1.00 3.00 O ATOM 3285 N MET 846 -13.080 47.149 43.983 1.00 3.00 N ATOM 3286 CA MET 846 -13.642 48.491 44.090 1.00 3.00 C ATOM 3287 C MET 846 -14.081 49.008 42.724 1.00 3.00 C ATOM 3288 O MET 846 -14.438 50.170 42.592 1.00 3.00 O ATOM 3289 N HIS 847 -14.043 48.143 41.713 1.00 3.00 N ATOM 3290 CA HIS 847 -14.426 48.516 40.354 1.00 3.00 C ATOM 3291 C HIS 847 -13.520 49.616 39.781 1.00 3.00 C ATOM 3292 O HIS 847 -13.976 50.527 39.081 1.00 3.00 O ATOM 3293 N THR 848 -12.233 49.520 40.106 1.00 3.00 N ATOM 3294 CA THR 848 -11.214 50.380 39.540 1.00 3.00 C ATOM 3295 C THR 848 -10.465 49.664 38.404 1.00 3.00 C ATOM 3296 O THR 848 -9.506 50.193 37.836 1.00 3.00 O ATOM 3297 N ALA 849 -10.924 48.462 38.075 1.00 3.00 N ATOM 3298 CA ALA 849 -10.401 47.697 36.949 1.00 3.00 C ATOM 3299 C ALA 849 -11.519 46.849 36.361 1.00 3.00 C ATOM 3300 O ALA 849 -12.456 46.464 37.064 1.00 3.00 O ATOM 3301 N ARG 850 -11.406 46.553 35.071 1.00 3.00 N ATOM 3302 CA ARG 850 -12.378 45.719 34.383 1.00 3.00 C ATOM 3303 C ARG 850 -11.953 44.262 34.494 1.00 3.00 C ATOM 3304 O ARG 850 -10.852 43.962 34.960 1.00 3.00 O ATOM 3305 N VAL 851 -12.828 43.361 34.055 1.00 3.00 N ATOM 3306 CA VAL 851 -12.553 41.940 34.102 1.00 3.00 C ATOM 3307 C VAL 851 -11.391 41.518 33.224 1.00 3.00 C ATOM 3308 O VAL 851 -10.727 40.529 33.519 1.00 3.00 O ATOM 3309 N ARG 852 -11.135 42.259 32.147 1.00 3.00 N ATOM 3310 CA ARG 852 -10.112 41.839 31.189 1.00 3.00 C ATOM 3311 C ARG 852 -9.135 41.332 32.247 1.00 3.00 C ATOM 3312 O ARG 852 -8.365 40.413 32.008 1.00 3.00 O ATOM 3313 N ASP 853 -9.234 41.894 33.452 1.00 3.00 N ATOM 3314 CA ASP 853 -8.391 41.535 34.565 1.00 3.00 C ATOM 3315 C ASP 853 -8.565 40.087 34.965 1.00 3.00 C ATOM 3316 O ASP 853 -7.595 39.336 35.107 1.00 3.00 O ATOM 3317 N ILE 854 -9.808 39.614 35.063 1.00 3.00 N ATOM 3318 CA ILE 854 -10.044 38.243 35.489 1.00 3.00 C ATOM 3319 C ILE 854 -9.450 37.190 34.571 1.00 3.00 C ATOM 3320 O ILE 854 -9.213 36.071 35.011 1.00 3.00 O ATOM 3321 N GLU 855 -9.150 37.530 33.302 1.00 3.00 N ATOM 3322 CA GLU 855 -8.442 36.632 32.420 1.00 3.00 C ATOM 3323 C GLU 855 -6.992 36.350 32.802 1.00 3.00 C ATOM 3324 O GLU 855 -6.403 35.399 32.267 1.00 3.00 O ATOM 3325 N HIS 856 -6.411 37.180 33.681 1.00 3.00 N ATOM 3326 CA HIS 856 -5.056 36.911 34.198 1.00 3.00 C ATOM 3327 C HIS 856 -4.955 35.692 35.128 1.00 3.00 C ATOM 3328 O HIS 856 -3.924 35.065 35.279 1.00 3.00 O ATOM 3329 N LEU 857 -6.118 35.271 35.653 1.00 3.00 N ATOM 3330 CA LEU 857 -6.208 34.186 36.595 1.00 3.00 C ATOM 3331 C LEU 857 -5.517 33.343 35.527 1.00 3.00 C ATOM 3332 O LEU 857 -5.078 32.226 35.776 1.00 3.00 O ATOM 3333 N THR 858 -5.424 33.905 34.329 1.00 3.00 N ATOM 3334 CA THR 858 -4.759 33.270 33.205 1.00 3.00 C ATOM 3335 C THR 858 -4.100 31.904 33.374 1.00 3.00 C ATOM 3336 O THR 858 -4.744 30.952 33.818 1.00 3.00 O ATOM 3337 N GLY 859 -2.828 31.800 33.006 1.00 3.00 N ATOM 3338 CA GLY 859 -2.114 30.543 33.140 1.00 3.00 C ATOM 3339 C GLY 859 -1.996 30.214 34.624 1.00 3.00 C ATOM 3340 O GLY 859 -1.559 31.049 35.408 1.00 3.00 O ATOM 3341 N LEU 860 -2.424 29.016 34.997 1.00 3.00 N ATOM 3342 CA LEU 860 -2.366 28.596 36.401 1.00 3.00 C ATOM 3343 C LEU 860 -0.946 28.111 36.735 1.00 3.00 C ATOM 3344 O LEU 860 -0.429 27.207 36.090 1.00 3.00 O ATOM 3345 N ASP 861 -0.323 28.684 37.767 1.00 3.00 N ATOM 3346 CA ASP 861 1.034 28.302 38.184 1.00 3.00 C ATOM 3347 C ASP 861 1.194 26.822 38.507 1.00 3.00 C ATOM 3348 O ASP 861 2.253 26.237 38.298 1.00 3.00 O ATOM 3349 N PHE 862 0.128 26.218 39.030 1.00 3.00 N ATOM 3350 CA PHE 862 0.160 24.815 39.425 1.00 3.00 C ATOM 3351 C PHE 862 0.195 23.822 38.274 1.00 3.00 C ATOM 3352 O PHE 862 0.869 22.800 38.353 1.00 3.00 O ATOM 3353 N TYR 863 -0.499 24.133 37.189 1.00 3.00 N ATOM 3354 CA TYR 863 -0.571 23.214 36.050 1.00 3.00 C ATOM 3355 C TYR 863 0.869 22.703 35.969 1.00 3.00 C ATOM 3356 O TYR 863 1.086 21.526 35.701 1.00 3.00 O ATOM 3357 N ARG 864 1.843 23.575 36.224 1.00 3.00 N ATOM 3358 CA ARG 864 3.258 23.186 36.222 1.00 3.00 C ATOM 3359 C ARG 864 3.860 23.116 37.634 1.00 3.00 C ATOM 3360 O ARG 864 4.748 23.901 37.975 1.00 3.00 O ATOM 3361 N LYS 865 3.383 22.171 38.442 1.00 3.00 N ATOM 3362 CA LYS 865 3.888 21.969 39.804 1.00 3.00 C ATOM 3363 C LYS 865 3.951 23.275 40.593 1.00 3.00 C ATOM 3364 O LYS 865 5.004 23.908 40.680 1.00 3.00 O ATOM 3365 N THR 866 2.814 23.665 41.187 1.00 3.00 N ATOM 3366 CA THR 866 2.608 24.971 41.828 1.00 3.00 C ATOM 3367 C THR 866 3.284 25.055 43.186 1.00 3.00 C ATOM 3368 O THR 866 3.218 24.100 43.954 1.00 3.00 O ATOM 3369 N SER 867 3.924 26.184 43.471 1.00 3.00 N ATOM 3370 CA SER 867 4.545 26.394 44.769 1.00 3.00 C ATOM 3371 C SER 867 3.468 26.791 45.769 1.00 3.00 C ATOM 3372 O SER 867 2.352 27.124 45.386 1.00 3.00 O ATOM 3373 N ARG 868 3.790 26.753 47.052 1.00 3.00 N ATOM 3374 CA ARG 868 2.779 27.043 48.055 1.00 3.00 C ATOM 3375 C ARG 868 2.399 28.528 48.131 1.00 3.00 C ATOM 3376 O ARG 868 1.264 28.862 48.458 1.00 3.00 O ATOM 3377 N SER 869 3.334 29.412 47.810 1.00 3.00 N ATOM 3378 CA SER 869 3.033 30.838 47.744 1.00 3.00 C ATOM 3379 C SER 869 2.018 31.156 46.639 1.00 3.00 C ATOM 3380 O SER 869 1.138 31.993 46.816 1.00 3.00 O ATOM 3381 N TYR 870 2.143 30.479 45.502 1.00 3.00 N ATOM 3382 CA TYR 870 1.228 30.687 44.387 1.00 3.00 C ATOM 3383 C TYR 870 -0.190 30.245 44.727 1.00 3.00 C ATOM 3384 O TYR 870 -1.149 30.980 44.491 1.00 3.00 O ATOM 3385 N SER 871 -0.302 29.043 45.287 1.00 3.00 N ATOM 3386 CA SER 871 -1.573 28.481 45.746 1.00 3.00 C ATOM 3387 C SER 871 -2.222 29.354 46.807 1.00 3.00 C ATOM 3388 O SER 871 -3.428 29.570 46.801 1.00 3.00 O ATOM 3389 N GLU 872 -1.405 29.809 47.744 1.00 3.00 N ATOM 3390 CA GLU 872 -1.815 30.779 48.741 1.00 3.00 C ATOM 3391 C GLU 872 -3.209 31.126 49.242 1.00 3.00 C ATOM 3392 O GLU 872 -4.006 30.262 49.632 1.00 3.00 O ATOM 3393 N ILE 873 -3.491 32.427 49.248 1.00 3.00 N ATOM 3394 CA ILE 873 -4.799 32.944 49.616 1.00 3.00 C ATOM 3395 C ILE 873 -5.420 33.091 48.222 1.00 3.00 C ATOM 3396 O ILE 873 -5.021 33.976 47.454 1.00 3.00 O ATOM 3397 N LEU 874 -6.360 32.214 47.896 1.00 3.00 N ATOM 3398 CA LEU 874 -7.031 32.244 46.584 1.00 3.00 C ATOM 3399 C LEU 874 -7.595 33.617 46.220 1.00 3.00 C ATOM 3400 O LEU 874 -8.329 34.227 47.006 1.00 3.00 O ATOM 3401 N THR 875 -7.266 34.093 45.019 1.00 3.00 N ATOM 3402 CA THR 875 -7.731 35.387 44.546 1.00 3.00 C ATOM 3403 C THR 875 -9.225 35.625 44.731 1.00 3.00 C ATOM 3404 O THR 875 -9.653 36.746 45.004 1.00 3.00 O ATOM 3405 N LEU 876 -10.010 34.564 44.567 1.00 3.00 N ATOM 3406 CA LEU 876 -11.465 34.670 44.662 1.00 3.00 C ATOM 3407 C LEU 876 -11.978 35.026 46.049 1.00 3.00 C ATOM 3408 O LEU 876 -12.948 35.763 46.180 1.00 3.00 O ATOM 3409 N LYS 877 -11.323 34.511 47.091 1.00 3.00 N ATOM 3410 CA LYS 877 -11.751 34.781 48.461 1.00 3.00 C ATOM 3411 C LYS 877 -12.130 36.251 48.358 1.00 3.00 C ATOM 3412 O LYS 877 -13.231 36.644 48.724 1.00 3.00 O ATOM 3413 N THR 878 -11.214 37.053 47.834 1.00 3.00 N ATOM 3414 CA THR 878 -11.445 38.476 47.653 1.00 3.00 C ATOM 3415 C THR 878 -12.423 38.804 46.517 1.00 3.00 C ATOM 3416 O THR 878 -13.256 39.691 46.650 1.00 3.00 O ATOM 3417 N TYR 879 -12.350 38.058 45.424 1.00 3.00 N ATOM 3418 CA TYR 879 -12.888 38.516 44.150 1.00 3.00 C ATOM 3419 C TYR 879 -13.678 37.439 43.409 1.00 3.00 C ATOM 3420 O TYR 879 -14.294 37.710 42.382 1.00 3.00 O ATOM 3421 N LEU 880 -13.663 36.220 43.944 1.00 3.00 N ATOM 3422 CA LEU 880 -14.284 35.072 43.297 1.00 3.00 C ATOM 3423 C LEU 880 -15.774 35.204 43.014 1.00 3.00 C ATOM 3424 O LEU 880 -16.225 34.878 41.925 1.00 3.00 O ATOM 3425 N HIS 881 -16.545 35.669 43.993 1.00 3.00 N ATOM 3426 CA HIS 881 -17.974 35.866 43.794 1.00 3.00 C ATOM 3427 C HIS 881 -18.251 36.882 42.698 1.00 3.00 C ATOM 3428 O HIS 881 -18.961 36.593 41.750 1.00 3.00 O ATOM 3429 N THR 882 -17.686 38.077 42.848 1.00 3.00 N ATOM 3430 CA THR 882 -17.867 39.156 41.892 1.00 3.00 C ATOM 3431 C THR 882 -17.474 38.755 40.470 1.00 3.00 C ATOM 3432 O THR 882 -18.188 39.049 39.517 1.00 3.00 O ATOM 3433 N TYR 883 -16.351 38.056 40.348 1.00 3.00 N ATOM 3434 CA TYR 883 -15.849 37.585 39.057 1.00 3.00 C ATOM 3435 C TYR 883 -16.766 36.579 38.392 1.00 3.00 C ATOM 3436 O TYR 883 -16.706 36.378 37.183 1.00 3.00 O ATOM 3437 N GLU 884 -17.597 35.930 39.195 1.00 3.00 N ATOM 3438 CA GLU 884 -18.501 34.911 38.696 1.00 3.00 C ATOM 3439 C GLU 884 -19.190 35.402 37.433 1.00 3.00 C ATOM 3440 O GLU 884 -19.302 34.677 36.448 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## # ERROR! (P) Check SS type for residue number 1501