####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 48 ( 192), selected 46 , name T0543TS328_1_5 # Molecule2: number of CA atoms 784 ( 6318), selected 46 , name T0543.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS328_1_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 853 - 875 4.95 12.22 LCS_AVERAGE: 2.76 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 847 - 857 1.87 20.84 LONGEST_CONTINUOUS_SEGMENT: 11 848 - 858 1.86 20.46 LCS_AVERAGE: 0.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 839 - 847 0.27 24.99 LCS_AVERAGE: 0.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 46 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT W 839 W 839 9 9 14 9 9 9 9 9 9 10 10 10 12 13 14 16 16 17 18 19 21 21 23 LCS_GDT V 840 V 840 9 9 14 9 9 9 9 9 9 10 10 10 12 13 14 16 16 17 18 20 21 21 31 LCS_GDT E 841 E 841 9 9 20 9 9 9 9 9 9 10 10 12 12 13 14 16 16 18 18 20 29 30 32 LCS_GDT E 842 E 842 9 9 20 9 9 9 9 9 9 10 10 12 12 14 14 17 23 24 27 31 34 36 38 LCS_GDT L 843 L 843 9 9 20 9 9 9 9 9 9 10 10 12 15 19 21 23 26 31 34 35 36 38 40 LCS_GDT M 844 M 844 9 9 20 9 9 9 9 9 9 10 10 12 15 19 21 26 29 32 34 35 36 38 40 LCS_GDT K 845 K 845 9 9 20 9 9 9 9 9 9 10 10 14 15 19 21 27 29 32 34 35 36 38 40 LCS_GDT M 846 M 846 9 9 20 9 9 9 9 10 11 12 14 14 15 21 23 27 29 32 34 35 36 38 40 LCS_GDT H 847 H 847 9 11 20 9 9 9 9 9 9 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT T 848 T 848 7 11 20 5 6 9 9 10 10 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT A 849 A 849 7 11 20 5 6 9 9 10 11 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT R 850 R 850 8 11 20 5 6 9 9 10 11 12 14 14 15 16 18 18 20 21 25 30 36 37 40 LCS_GDT V 851 V 851 8 11 20 5 6 9 9 10 11 12 14 14 15 16 18 18 20 24 27 35 36 38 40 LCS_GDT R 852 R 852 8 11 20 5 6 9 9 10 11 12 14 14 15 16 18 18 20 22 26 29 35 36 40 LCS_GDT D 853 D 853 8 11 23 4 6 9 9 10 11 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT I 854 I 854 8 11 23 4 6 9 9 10 11 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT E 855 E 855 8 11 23 4 6 9 9 10 11 12 14 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT H 856 H 856 8 11 23 4 6 9 9 10 11 12 14 14 17 21 21 27 29 32 34 35 36 38 40 LCS_GDT L 857 L 857 8 11 23 4 5 8 9 10 11 12 14 14 15 16 18 24 27 32 34 35 36 38 40 LCS_GDT T 858 T 858 4 11 23 3 4 4 6 9 11 12 14 14 15 21 23 27 29 32 34 35 36 38 40 LCS_GDT G 859 G 859 4 10 23 3 4 4 6 9 10 12 14 14 15 21 23 27 29 32 34 35 36 38 40 LCS_GDT L 860 L 860 4 5 23 3 4 4 5 5 6 8 9 13 15 19 23 27 29 32 34 35 36 38 40 LCS_GDT D 861 D 861 4 5 23 3 4 4 5 5 6 8 9 13 15 21 23 27 29 32 34 35 36 38 40 LCS_GDT F 862 F 862 4 5 23 3 4 4 5 5 6 8 8 10 15 19 21 23 29 32 34 35 36 38 40 LCS_GDT Y 863 Y 863 4 6 23 3 3 4 4 5 6 8 10 11 13 18 19 23 25 26 32 34 36 38 40 LCS_GDT R 864 R 864 4 6 23 3 3 4 4 5 6 8 9 12 15 19 23 27 29 32 34 35 36 38 40 LCS_GDT K 865 K 865 4 6 23 3 3 4 4 7 7 8 10 12 15 19 22 27 29 32 34 35 36 38 40 LCS_GDT T 866 T 866 4 6 23 3 3 4 4 7 7 8 13 14 15 19 23 27 29 32 34 35 36 38 40 LCS_GDT S 867 S 867 4 6 23 3 3 4 6 7 8 10 13 14 17 19 23 27 29 32 34 35 36 38 40 LCS_GDT R 868 R 868 4 6 23 1 3 4 6 7 8 10 12 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT S 869 S 869 4 6 23 4 4 5 6 7 9 10 13 14 17 21 21 25 29 32 34 35 36 38 40 LCS_GDT Y 870 Y 870 4 6 23 4 4 4 6 7 7 10 12 14 17 21 21 25 29 32 34 35 36 38 40 LCS_GDT S 871 S 871 4 6 23 4 4 5 6 7 7 10 12 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT E 872 E 872 4 6 23 4 4 5 6 7 9 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT I 873 I 873 3 7 23 3 3 5 6 7 9 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT L 874 L 874 6 7 23 4 6 6 6 7 8 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT T 875 T 875 6 7 23 4 6 6 6 7 9 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT L 876 L 876 6 7 22 4 6 6 6 7 8 10 13 14 15 19 23 27 29 32 34 35 36 38 40 LCS_GDT K 877 K 877 6 7 22 4 6 6 6 7 9 10 13 14 15 17 18 24 29 32 34 35 36 38 40 LCS_GDT T 878 T 878 6 7 22 3 6 6 6 7 9 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT Y 879 Y 879 6 7 22 3 6 6 6 7 9 10 13 14 17 21 23 27 29 32 34 35 36 38 40 LCS_GDT L 880 L 880 3 4 22 3 3 3 4 7 9 10 13 14 15 19 21 27 29 32 34 35 36 38 40 LCS_GDT H 881 H 881 3 4 22 3 3 3 5 7 9 10 13 14 15 18 21 23 25 28 32 35 36 38 40 LCS_GDT T 882 T 882 3 3 22 3 3 3 4 7 9 10 13 14 15 19 21 23 27 30 34 35 36 38 40 LCS_GDT Y 883 Y 883 3 3 22 3 3 3 3 4 4 5 11 12 13 18 19 20 22 22 22 25 28 30 36 LCS_GDT E 884 E 884 3 3 21 3 3 3 3 4 4 5 7 8 10 13 16 17 18 19 21 22 25 27 28 LCS_AVERAGE LCS_A: 1.50 ( 0.76 0.98 2.76 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 9 9 9 10 11 12 14 14 17 21 23 27 29 32 34 35 36 38 40 GDT PERCENT_AT 1.15 1.15 1.15 1.15 1.28 1.40 1.53 1.79 1.79 2.17 2.68 2.93 3.44 3.70 4.08 4.34 4.46 4.59 4.85 5.10 GDT RMS_LOCAL 0.27 0.27 0.27 0.27 1.32 1.81 2.04 2.49 2.49 3.66 4.21 4.79 5.19 5.36 5.58 5.77 5.93 6.07 6.35 6.60 GDT RMS_ALL_AT 24.99 24.99 24.99 24.99 20.75 20.63 20.93 20.41 20.41 9.71 9.36 8.88 8.51 8.45 8.56 8.49 8.35 8.33 8.24 8.27 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA W 839 W 839 19.958 10 0.092 0.092 22.075 0.000 0.000 LGA V 840 V 840 18.123 3 0.032 0.032 19.527 0.000 0.000 LGA E 841 E 841 15.597 5 0.020 0.020 16.900 0.000 0.000 LGA E 842 E 842 12.491 5 0.134 0.134 14.096 1.190 0.529 LGA L 843 L 843 9.474 4 0.041 0.041 10.853 6.429 3.214 LGA M 844 M 844 7.517 4 0.072 0.072 8.881 18.690 9.345 LGA K 845 K 845 6.504 5 0.059 0.059 6.655 21.071 9.365 LGA M 846 M 846 2.248 4 0.184 0.184 3.787 57.738 28.869 LGA H 847 H 847 3.635 6 0.089 0.089 5.558 44.881 17.952 LGA T 848 T 848 3.932 3 0.664 0.664 3.932 50.357 28.776 LGA A 849 A 849 2.381 1 0.050 0.050 2.901 64.881 51.905 LGA R 850 R 850 1.681 7 0.094 0.094 1.681 75.000 27.273 LGA V 851 V 851 2.224 3 0.081 0.081 2.224 70.952 40.544 LGA R 852 R 852 1.671 7 0.169 0.169 1.799 75.000 27.273 LGA D 853 D 853 1.197 4 0.066 0.066 1.275 81.429 40.714 LGA I 854 I 854 0.995 4 0.093 0.093 1.210 85.952 42.976 LGA E 855 E 855 0.554 5 0.154 0.154 0.680 90.476 40.212 LGA H 856 H 856 1.255 6 0.071 0.071 1.334 81.429 32.571 LGA L 857 L 857 2.597 4 0.271 0.271 3.227 59.167 29.583 LGA T 858 T 858 3.538 3 0.505 0.505 3.538 59.524 34.014 LGA G 859 G 859 3.629 0 0.534 0.534 6.589 32.024 32.024 LGA L 860 L 860 9.052 4 0.110 0.110 12.372 3.690 1.845 LGA D 861 D 861 16.100 4 0.634 0.634 19.189 0.000 0.000 LGA F 862 F 862 20.737 7 0.596 0.596 23.163 0.000 0.000 LGA Y 863 Y 863 22.881 8 0.422 0.422 25.364 0.000 0.000 LGA R 864 R 864 24.932 7 0.398 0.398 28.369 0.000 0.000 LGA K 865 K 865 31.176 5 0.031 0.031 33.295 0.000 0.000 LGA T 866 T 866 33.460 3 0.173 0.173 36.828 0.000 0.000 LGA S 867 S 867 39.831 2 0.682 0.682 39.831 0.000 0.000 LGA R 868 R 868 39.976 7 0.658 0.658 39.976 0.000 0.000 LGA S 869 S 869 38.475 2 0.626 0.626 39.382 0.000 0.000 LGA Y 870 Y 870 31.419 8 0.052 0.052 34.243 0.000 0.000 LGA S 871 S 871 33.293 2 0.025 0.025 33.393 0.000 0.000 LGA E 872 E 872 35.150 5 0.335 0.335 35.150 0.000 0.000 LGA I 873 I 873 30.771 4 0.646 0.646 32.436 0.000 0.000 LGA L 874 L 874 26.583 4 0.602 0.602 28.589 0.000 0.000 LGA T 875 T 875 24.613 3 0.097 0.097 25.527 0.000 0.000 LGA L 876 L 876 22.114 4 0.018 0.018 23.355 0.000 0.000 LGA K 877 K 877 22.615 5 0.205 0.205 22.718 0.000 0.000 LGA T 878 T 878 21.212 3 0.176 0.176 22.024 0.000 0.000 LGA Y 879 Y 879 17.897 8 0.666 0.666 19.192 0.000 0.000 LGA L 880 L 880 17.942 4 0.619 0.619 19.094 0.000 0.000 LGA H 881 H 881 17.461 6 0.581 0.581 17.461 0.000 0.000 LGA T 882 T 882 15.565 3 0.134 0.134 16.497 0.000 0.000 LGA Y 883 Y 883 17.471 8 0.172 0.172 20.734 0.000 0.000 LGA E 884 E 884 23.458 5 0.035 0.035 25.505 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 46 184 184 100.00 398 184 46.23 784 SUMMARY(RMSD_GDC): 8.022 7.850 7.850 1.250 0.636 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 48 784 4.0 14 2.49 2.105 1.733 0.541 LGA_LOCAL RMSD: 2.488 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.409 Number of assigned atoms: 46 Std_ASGN_ATOMS RMSD: 8.022 Standard rmsd on all 46 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.268230 * X + 0.522851 * Y + -0.809123 * Z + -9.463949 Y_new = -0.962160 * X + 0.187220 * Y + -0.197983 * Z + 39.652905 Z_new = 0.047968 * X + 0.831610 * Y + 0.553284 * Z + 83.024223 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.298920 -0.047987 0.983729 [DEG: -74.4226 -2.7494 56.3635 ] ZXZ: -1.330823 0.984495 0.057617 [DEG: -76.2505 56.4074 3.3012 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS328_1_5 REMARK 2: T0543.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS328_1_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 48 784 4.0 14 2.49 1.733 8.02 REMARK ---------------------------------------------------------- MOLECULE T0543TS328_1_5 REMARK PARENT number 5 PFRMAT TS TARGET T0543 PARENT 2vso_E ATOM 3257 N TRP 839 -2.922 42.992 44.524 1.00 3.00 ATOM 3258 CA TRP 839 -3.318 44.382 44.408 1.00 3.00 ATOM 3259 C TRP 839 -4.353 44.581 43.306 1.00 3.00 ATOM 3260 O TRP 839 -5.301 45.348 43.470 1.00 3.00 ATOM 3261 N VAL 840 -4.169 43.875 42.199 1.00 3.00 ATOM 3262 CA VAL 840 -5.180 43.817 41.161 1.00 3.00 ATOM 3263 C VAL 840 -6.521 43.448 41.776 1.00 3.00 ATOM 3264 O VAL 840 -7.552 44.058 41.450 1.00 3.00 ATOM 3265 N GLU 841 -6.501 42.430 42.649 1.00 3.00 ATOM 3266 CA GLU 841 -7.712 41.868 43.226 1.00 3.00 ATOM 3267 C GLU 841 -8.465 42.873 44.077 1.00 3.00 ATOM 3268 O GLU 841 -9.684 42.859 44.144 1.00 3.00 ATOM 3269 N GLU 842 -7.720 43.751 44.728 1.00 3.00 ATOM 3270 CA GLU 842 -8.294 44.836 45.511 1.00 3.00 ATOM 3271 C GLU 842 -8.752 46.050 44.691 1.00 3.00 ATOM 3272 O GLU 842 -9.603 46.810 45.130 1.00 3.00 ATOM 3273 N LEU 843 -8.188 46.229 43.504 1.00 3.00 ATOM 3274 CA LEU 843 -8.621 47.287 42.608 1.00 3.00 ATOM 3275 C LEU 843 -9.884 46.847 41.880 1.00 3.00 ATOM 3276 O LEU 843 -10.836 47.600 41.740 1.00 3.00 ATOM 3277 N MET 844 -9.865 45.611 41.403 1.00 3.00 ATOM 3278 CA MET 844 -11.008 45.028 40.730 1.00 3.00 ATOM 3279 C MET 844 -12.233 45.095 41.630 1.00 3.00 ATOM 3280 O MET 844 -13.322 45.431 41.180 1.00 3.00 ATOM 3281 N LYS 845 -12.035 44.794 42.909 1.00 3.00 ATOM 3282 CA LYS 845 -13.133 44.727 43.862 1.00 3.00 ATOM 3283 C LYS 845 -13.811 46.075 44.113 1.00 3.00 ATOM 3284 O LYS 845 -14.993 46.131 44.440 1.00 3.00 ATOM 3285 N MET 846 -13.058 47.160 43.973 1.00 3.00 ATOM 3286 CA MET 846 -13.622 48.501 44.079 1.00 3.00 ATOM 3287 C MET 846 -14.069 49.013 42.714 1.00 3.00 ATOM 3288 O MET 846 -14.429 50.174 42.580 1.00 3.00 ATOM 3289 N HIS 847 -14.034 48.145 41.705 1.00 3.00 ATOM 3290 CA HIS 847 -14.424 48.514 40.346 1.00 3.00 ATOM 3291 C HIS 847 -13.523 49.614 39.766 1.00 3.00 ATOM 3292 O HIS 847 -13.984 50.522 39.066 1.00 3.00 ATOM 3293 N THR 848 -12.235 49.521 40.086 1.00 3.00 ATOM 3294 CA THR 848 -11.220 50.383 39.512 1.00 3.00 ATOM 3295 C THR 848 -10.474 49.665 38.376 1.00 3.00 ATOM 3296 O THR 848 -9.520 50.195 37.802 1.00 3.00 ATOM 3297 N ALA 849 -10.932 48.461 38.052 1.00 3.00 ATOM 3298 CA ALA 849 -10.413 47.693 36.925 1.00 3.00 ATOM 3299 C ALA 849 -11.532 46.841 36.345 1.00 3.00 ATOM 3300 O ALA 849 -12.465 46.456 37.053 1.00 3.00 ATOM 3301 N ARG 850 -11.424 46.542 35.056 1.00 3.00 ATOM 3302 CA ARG 850 -12.397 45.704 34.375 1.00 3.00 ATOM 3303 C ARG 850 -11.968 44.248 34.487 1.00 3.00 ATOM 3304 O ARG 850 -10.864 43.952 34.949 1.00 3.00 ATOM 3305 N VAL 851 -12.844 43.344 34.055 1.00 3.00 ATOM 3306 CA VAL 851 -12.565 41.924 34.105 1.00 3.00 ATOM 3307 C VAL 851 -11.406 41.502 33.223 1.00 3.00 ATOM 3308 O VAL 851 -10.739 40.515 33.518 1.00 3.00 ATOM 3309 N ARG 852 -11.156 42.240 32.143 1.00 3.00 ATOM 3310 CA ARG 852 -10.137 41.820 31.182 1.00 3.00 ATOM 3311 C ARG 852 -9.154 41.318 32.236 1.00 3.00 ATOM 3312 O ARG 852 -8.383 40.400 31.997 1.00 3.00 ATOM 3313 N ASP 853 -9.248 41.884 33.440 1.00 3.00 ATOM 3314 CA ASP 853 -8.399 41.529 34.550 1.00 3.00 ATOM 3315 C ASP 853 -8.569 40.082 34.955 1.00 3.00 ATOM 3316 O ASP 853 -7.597 39.334 35.095 1.00 3.00 ATOM 3317 N ILE 854 -9.810 39.606 35.060 1.00 3.00 ATOM 3318 CA ILE 854 -10.042 38.236 35.492 1.00 3.00 ATOM 3319 C ILE 854 -9.449 37.182 34.573 1.00 3.00 ATOM 3320 O ILE 854 -9.208 36.065 35.016 1.00 3.00 ATOM 3321 N GLU 855 -9.156 37.519 33.302 1.00 3.00 ATOM 3322 CA GLU 855 -8.450 36.620 32.419 1.00 3.00 ATOM 3323 C GLU 855 -6.997 36.342 32.795 1.00 3.00 ATOM 3324 O GLU 855 -6.409 35.391 32.261 1.00 3.00 ATOM 3325 N HIS 856 -6.414 37.176 33.670 1.00 3.00 ATOM 3326 CA HIS 856 -5.056 36.912 34.181 1.00 3.00 ATOM 3327 C HIS 856 -4.948 35.695 35.115 1.00 3.00 ATOM 3328 O HIS 856 -3.916 35.072 35.262 1.00 3.00 ATOM 3329 N LEU 857 -6.108 35.274 35.646 1.00 3.00 ATOM 3330 CA LEU 857 -6.192 34.191 36.591 1.00 3.00 ATOM 3331 C LEU 857 -5.503 33.346 35.522 1.00 3.00 ATOM 3332 O LEU 857 -5.061 32.232 35.773 1.00 3.00 ATOM 3333 N THR 858 -5.417 33.906 34.323 1.00 3.00 ATOM 3334 CA THR 858 -4.755 33.268 33.197 1.00 3.00 ATOM 3335 C THR 858 -4.093 31.904 33.367 1.00 3.00 ATOM 3336 O THR 858 -4.733 30.952 33.817 1.00 3.00 ATOM 3337 N GLY 859 -2.822 31.803 32.994 1.00 3.00 ATOM 3338 CA GLY 859 -2.105 30.547 33.128 1.00 3.00 ATOM 3339 C GLY 859 -1.980 30.222 34.613 1.00 3.00 ATOM 3340 O GLY 859 -1.541 31.061 35.392 1.00 3.00 ATOM 3341 N LEU 860 -2.403 29.025 34.991 1.00 3.00 ATOM 3342 CA LEU 860 -2.338 28.609 36.396 1.00 3.00 ATOM 3343 C LEU 860 -0.915 28.128 36.725 1.00 3.00 ATOM 3344 O LEU 860 -0.399 27.223 36.080 1.00 3.00 ATOM 3345 N ASP 861 -0.289 28.705 37.753 1.00 3.00 ATOM 3346 CA ASP 861 1.071 28.327 38.164 1.00 3.00 ATOM 3347 C ASP 861 1.236 26.849 38.491 1.00 3.00 ATOM 3348 O ASP 861 2.295 26.265 38.279 1.00 3.00 ATOM 3349 N PHE 862 0.174 26.244 39.020 1.00 3.00 ATOM 3350 CA PHE 862 0.210 24.843 39.419 1.00 3.00 ATOM 3351 C PHE 862 0.242 23.846 38.271 1.00 3.00 ATOM 3352 O PHE 862 0.918 22.826 38.349 1.00 3.00 ATOM 3353 N TYR 863 -0.458 24.152 37.188 1.00 3.00 ATOM 3354 CA TYR 863 -0.532 23.230 36.052 1.00 3.00 ATOM 3355 C TYR 863 0.908 22.722 35.966 1.00 3.00 ATOM 3356 O TYR 863 1.126 21.544 35.701 1.00 3.00 ATOM 3357 N ARG 864 1.881 23.597 36.214 1.00 3.00 ATOM 3358 CA ARG 864 3.297 23.211 36.207 1.00 3.00 ATOM 3359 C ARG 864 3.906 23.146 37.616 1.00 3.00 ATOM 3360 O ARG 864 4.794 23.934 37.950 1.00 3.00 ATOM 3361 N LYS 865 3.435 22.202 38.429 1.00 3.00 ATOM 3362 CA LYS 865 3.946 22.005 39.789 1.00 3.00 ATOM 3363 C LYS 865 4.010 23.313 40.574 1.00 3.00 ATOM 3364 O LYS 865 5.062 23.950 40.655 1.00 3.00 ATOM 3365 N THR 866 2.875 23.704 41.172 1.00 3.00 ATOM 3366 CA THR 866 2.669 25.010 41.810 1.00 3.00 ATOM 3367 C THR 866 3.351 25.100 43.165 1.00 3.00 ATOM 3368 O THR 866 3.291 24.147 43.936 1.00 3.00 ATOM 3369 N SER 867 3.989 26.231 43.444 1.00 3.00 ATOM 3370 CA SER 867 4.616 26.446 44.738 1.00 3.00 ATOM 3371 C SER 867 3.543 26.844 45.742 1.00 3.00 ATOM 3372 O SER 867 2.425 27.173 45.363 1.00 3.00 ATOM 3373 N ARG 868 3.871 26.810 47.024 1.00 3.00 ATOM 3374 CA ARG 868 2.864 27.101 48.030 1.00 3.00 ATOM 3375 C ARG 868 2.480 28.585 48.104 1.00 3.00 ATOM 3376 O ARG 868 1.346 28.918 48.435 1.00 3.00 ATOM 3377 N SER 869 3.413 29.471 47.777 1.00 3.00 ATOM 3378 CA SER 869 3.108 30.896 47.708 1.00 3.00 ATOM 3379 C SER 869 2.087 31.208 46.606 1.00 3.00 ATOM 3380 O SER 869 1.206 32.044 46.784 1.00 3.00 ATOM 3381 N TYR 870 2.209 30.528 45.471 1.00 3.00 ATOM 3382 CA TYR 870 1.288 30.731 44.359 1.00 3.00 ATOM 3383 C TYR 870 -0.128 30.287 44.707 1.00 3.00 ATOM 3384 O TYR 870 -1.090 31.019 44.474 1.00 3.00 ATOM 3385 N SER 871 -0.235 29.086 45.271 1.00 3.00 ATOM 3386 CA SER 871 -1.502 28.523 45.737 1.00 3.00 ATOM 3387 C SER 871 -2.148 29.398 46.799 1.00 3.00 ATOM 3388 O SER 871 -3.354 29.611 46.798 1.00 3.00 ATOM 3389 N GLU 872 -1.328 29.857 47.730 1.00 3.00 ATOM 3390 CA GLU 872 -1.736 30.829 48.727 1.00 3.00 ATOM 3391 C GLU 872 -3.128 31.174 49.234 1.00 3.00 ATOM 3392 O GLU 872 -3.921 30.309 49.629 1.00 3.00 ATOM 3393 N ILE 873 -3.413 32.475 49.237 1.00 3.00 ATOM 3394 CA ILE 873 -4.720 32.989 49.610 1.00 3.00 ATOM 3395 C ILE 873 -5.348 33.132 48.218 1.00 3.00 ATOM 3396 O ILE 873 -4.954 34.015 47.446 1.00 3.00 ATOM 3397 N LEU 874 -6.288 32.251 47.899 1.00 3.00 ATOM 3398 CA LEU 874 -6.964 32.276 46.589 1.00 3.00 ATOM 3399 C LEU 874 -7.533 33.646 46.224 1.00 3.00 ATOM 3400 O LEU 874 -8.265 34.258 47.011 1.00 3.00 ATOM 3401 N THR 875 -7.210 34.120 45.020 1.00 3.00 ATOM 3402 CA THR 875 -7.681 35.412 44.545 1.00 3.00 ATOM 3403 C THR 875 -9.174 35.646 44.737 1.00 3.00 ATOM 3404 O THR 875 -9.604 36.768 45.009 1.00 3.00 ATOM 3405 N LEU 876 -9.957 34.584 44.580 1.00 3.00 ATOM 3406 CA LEU 876 -11.412 34.687 44.681 1.00 3.00 ATOM 3407 C LEU 876 -11.920 35.046 46.069 1.00 3.00 ATOM 3408 O LEU 876 -12.891 35.781 46.203 1.00 3.00 ATOM 3409 N LYS 877 -11.259 34.535 47.110 1.00 3.00 ATOM 3410 CA LYS 877 -11.681 34.808 48.481 1.00 3.00 ATOM 3411 C LYS 877 -12.064 36.277 48.376 1.00 3.00 ATOM 3412 O LYS 877 -13.164 36.668 48.746 1.00 3.00 ATOM 3413 N THR 878 -11.152 37.079 47.845 1.00 3.00 ATOM 3414 CA THR 878 -11.387 38.501 47.661 1.00 3.00 ATOM 3415 C THR 878 -12.372 38.824 46.528 1.00 3.00 ATOM 3416 O THR 878 -13.206 39.709 46.662 1.00 3.00 ATOM 3417 N TYR 879 -12.302 38.075 45.437 1.00 3.00 ATOM 3418 CA TYR 879 -12.847 38.528 44.164 1.00 3.00 ATOM 3419 C TYR 879 -13.638 37.447 43.430 1.00 3.00 ATOM 3420 O TYR 879 -14.259 37.714 42.406 1.00 3.00 ATOM 3421 N LEU 880 -13.617 36.230 43.969 1.00 3.00 ATOM 3422 CA LEU 880 -14.238 35.079 43.327 1.00 3.00 ATOM 3423 C LEU 880 -15.730 35.206 43.051 1.00 3.00 ATOM 3424 O LEU 880 -16.186 34.877 41.965 1.00 3.00 ATOM 3425 N HIS 881 -16.498 35.672 44.032 1.00 3.00 ATOM 3426 CA HIS 881 -17.928 35.866 43.839 1.00 3.00 ATOM 3427 C HIS 881 -18.212 36.878 42.742 1.00 3.00 ATOM 3428 O HIS 881 -18.925 36.584 41.798 1.00 3.00 ATOM 3429 N THR 882 -17.649 38.074 42.885 1.00 3.00 ATOM 3430 CA THR 882 -17.837 39.151 41.927 1.00 3.00 ATOM 3431 C THR 882 -17.450 38.746 40.505 1.00 3.00 ATOM 3432 O THR 882 -18.169 39.036 39.554 1.00 3.00 ATOM 3433 N TYR 883 -16.326 38.049 40.379 1.00 3.00 ATOM 3434 CA TYR 883 -15.829 37.575 39.088 1.00 3.00 ATOM 3435 C TYR 883 -16.746 36.566 38.430 1.00 3.00 ATOM 3436 O TYR 883 -16.691 36.362 37.221 1.00 3.00 ATOM 3437 N GLU 884 -17.572 35.917 39.238 1.00 3.00 ATOM 3438 CA GLU 884 -18.476 34.894 38.746 1.00 3.00 ATOM 3439 C GLU 884 -19.172 35.381 37.486 1.00 3.00 ATOM 3440 O GLU 884 -19.287 34.652 36.502 1.00 3.00 ATOM 3441 N SER 885 -19.610 36.631 37.520 1.00 3.00 ATOM 3442 CA SER 885 -20.384 37.202 36.435 1.00 3.00 ATOM 3443 C SER 885 -19.658 38.374 35.778 1.00 3.00 ATOM 3444 O SER 885 -19.818 39.515 36.196 1.00 3.00 ATOM 3445 N GLU 886 -18.869 38.091 34.747 1.00 3.00 ATOM 3446 CA GLU 886 -18.066 39.129 34.113 1.00 3.00 ATOM 3447 C GLU 886 -17.478 38.615 32.802 1.00 3.00 ATOM 3448 O GLU 886 -16.898 37.534 32.758 1.00 3.00 TER END ########################## # # # ACE results: # # # ########################## # ERROR! (P) Check SS type for residue number 1501