####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS324_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS324_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.62 2.62 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 97 - 139 1.93 2.67 LONGEST_CONTINUOUS_SEGMENT: 43 98 - 140 1.93 2.73 LCS_AVERAGE: 93.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 116 - 137 0.96 2.99 LONGEST_CONTINUOUS_SEGMENT: 22 117 - 138 0.99 3.00 LCS_AVERAGE: 36.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 4 45 3 3 3 3 4 4 8 9 24 28 31 33 34 44 44 45 45 45 45 45 LCS_GDT A 97 A 97 4 43 45 3 3 4 5 5 6 11 19 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT R 98 R 98 4 43 45 3 3 10 21 29 39 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT G 99 G 99 12 43 45 6 17 28 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT W 100 W 100 12 43 45 6 17 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 101 E 101 12 43 45 4 22 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 102 C 102 12 43 45 11 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT T 103 T 103 12 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT K 104 K 104 12 43 45 11 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT D 105 D 105 12 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT R 106 R 106 12 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 107 C 107 12 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT G 108 G 108 12 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 109 E 109 12 43 45 12 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT V 110 V 110 12 43 45 3 14 29 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT R 111 R 111 7 43 45 3 4 8 24 36 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT N 112 N 112 8 43 45 4 16 29 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 113 E 113 8 43 45 3 6 18 26 36 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 114 E 114 10 43 45 6 12 28 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT N 115 N 115 21 43 45 6 18 29 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT A 116 A 116 22 43 45 6 23 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 117 C 117 22 43 45 11 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT H 118 H 118 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 119 C 119 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT S 120 S 120 22 43 45 4 19 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 121 E 121 22 43 45 3 19 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT D 122 D 122 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 123 C 123 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT L 124 L 124 22 43 45 3 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT S 125 S 125 22 43 45 8 24 30 36 39 39 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT R 126 R 126 22 43 45 5 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT G 127 G 127 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT D 128 D 128 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 129 C 129 22 43 45 6 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 130 C 130 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT T 131 T 131 22 43 45 5 10 28 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT N 132 N 132 22 43 45 5 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT Y 133 Y 133 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT Q 134 Q 134 22 43 45 7 18 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT V 135 V 135 22 43 45 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT V 136 V 136 22 43 45 10 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT C 137 C 137 22 43 45 5 14 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT K 138 K 138 22 43 45 5 14 26 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT G 139 G 139 12 43 45 5 10 22 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 LCS_GDT E 140 E 140 3 43 45 0 3 3 4 19 21 23 30 34 38 43 43 43 44 44 45 45 45 45 45 LCS_AVERAGE LCS_A: 76.56 ( 36.05 93.63 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 24 30 36 39 40 42 42 42 43 43 43 43 44 44 45 45 45 45 45 GDT PERCENT_AT 31.11 53.33 66.67 80.00 86.67 88.89 93.33 93.33 93.33 95.56 95.56 95.56 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.39 0.60 0.83 1.10 1.26 1.52 1.62 1.62 1.62 1.93 1.93 1.93 1.93 2.19 2.19 2.62 2.62 2.62 2.62 2.62 GDT RMS_ALL_AT 2.87 2.88 3.00 2.95 2.81 2.74 2.73 2.73 2.73 2.67 2.67 2.67 2.73 2.66 2.66 2.62 2.62 2.62 2.62 2.62 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 121 E 121 # possible swapping detected: D 128 D 128 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 10.829 0 0.602 1.339 13.494 1.905 1.361 LGA A 97 A 97 7.286 0 0.130 0.135 8.531 16.310 14.476 LGA R 98 R 98 3.753 0 0.652 0.715 13.603 57.262 22.641 LGA G 99 G 99 2.676 0 0.564 0.564 2.676 67.024 67.024 LGA W 100 W 100 1.945 0 0.038 1.052 4.637 70.833 56.803 LGA E 101 E 101 1.850 0 0.054 0.979 4.282 68.929 56.296 LGA C 102 C 102 0.755 0 0.159 0.803 2.415 88.214 86.270 LGA T 103 T 103 0.917 0 0.074 0.176 1.983 90.476 84.150 LGA K 104 K 104 0.836 0 0.064 0.892 5.587 90.476 70.000 LGA D 105 D 105 1.055 0 0.129 0.985 4.291 85.952 71.190 LGA R 106 R 106 0.496 0 0.122 1.113 4.704 97.619 83.247 LGA C 107 C 107 0.374 0 0.054 0.104 0.530 97.619 98.413 LGA G 108 G 108 0.207 0 0.173 0.173 0.800 97.619 97.619 LGA E 109 E 109 0.544 0 0.052 0.155 1.137 95.238 89.577 LGA V 110 V 110 1.363 0 0.634 1.431 4.127 75.476 63.878 LGA R 111 R 111 3.582 0 0.113 1.215 13.866 46.905 19.957 LGA N 112 N 112 1.494 0 0.075 0.573 7.021 81.429 59.167 LGA E 113 E 113 3.913 0 0.147 1.080 11.018 51.905 26.614 LGA E 114 E 114 1.980 0 0.468 1.048 5.602 66.905 50.423 LGA N 115 N 115 1.415 0 0.067 0.349 2.518 88.333 77.619 LGA A 116 A 116 1.636 0 0.044 0.070 2.497 77.143 74.667 LGA C 117 C 117 1.014 0 0.026 0.752 3.154 83.690 79.206 LGA H 118 H 118 0.595 0 0.045 1.105 2.515 95.238 81.238 LGA C 119 C 119 0.290 0 0.216 0.212 0.491 100.000 100.000 LGA S 120 S 120 1.872 0 0.058 0.609 2.787 77.143 71.746 LGA E 121 E 121 2.208 0 0.107 0.929 4.737 66.786 51.270 LGA D 122 D 122 0.747 0 0.234 1.239 4.307 85.952 74.167 LGA C 123 C 123 0.472 0 0.075 0.127 0.717 97.619 95.238 LGA L 124 L 124 1.068 0 0.056 1.010 2.857 83.929 79.643 LGA S 125 S 125 1.818 0 0.148 0.158 2.429 72.976 72.937 LGA R 126 R 126 0.834 0 0.129 1.320 4.396 90.476 76.883 LGA G 127 G 127 0.462 0 0.117 0.117 0.462 100.000 100.000 LGA D 128 D 128 0.532 0 0.103 1.028 2.604 92.857 82.024 LGA C 129 C 129 1.057 0 0.035 0.169 1.535 88.214 84.524 LGA C 130 C 130 0.328 0 0.052 0.113 1.123 92.857 90.556 LGA T 131 T 131 2.202 0 0.146 0.138 3.583 70.833 60.952 LGA N 132 N 132 1.260 0 0.142 0.237 1.613 81.548 81.488 LGA Y 133 Y 133 0.466 0 0.071 0.387 1.881 92.976 82.460 LGA Q 134 Q 134 1.551 0 0.064 0.280 5.677 79.286 58.624 LGA V 135 V 135 0.654 0 0.063 0.095 1.469 88.214 85.306 LGA V 136 V 136 0.959 0 0.071 1.037 2.334 83.810 80.408 LGA C 137 C 137 1.554 0 0.177 0.479 2.361 77.143 74.365 LGA K 138 K 138 1.717 0 0.355 0.654 5.535 70.833 57.672 LGA G 139 G 139 2.016 0 0.763 0.763 6.185 47.976 47.976 LGA E 140 E 140 7.359 0 0.189 0.971 14.991 17.500 8.095 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.623 2.520 3.856 76.698 67.737 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.62 81.667 87.452 2.438 LGA_LOCAL RMSD: 1.622 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.729 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.623 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.096302 * X + 0.629296 * Y + 0.771176 * Z + 10.215947 Y_new = 0.122783 * X + -0.776371 * Y + 0.618201 * Z + 71.853203 Z_new = 0.987750 * X + 0.035153 * Y + -0.152033 * Z + 41.766747 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.905686 -1.414112 2.914364 [DEG: 51.8920 -81.0227 166.9807 ] ZXZ: 2.246533 1.723421 1.535222 [DEG: 128.7169 98.7447 87.9617 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS324_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS324_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.62 87.452 2.62 REMARK ---------------------------------------------------------- MOLECULE T0543TS324_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 8.685 94.600 18.447 1.00138.93 N ATOM 729 CA THR 96 9.646 93.521 18.491 1.00138.93 C ATOM 730 CB THR 96 10.027 93.086 19.875 1.00138.93 C ATOM 731 OG1 THR 96 8.877 92.726 20.623 1.00138.93 O ATOM 732 CG2 THR 96 10.777 94.230 20.556 1.00138.93 C ATOM 733 C THR 96 9.194 92.310 17.740 1.00138.93 C ATOM 734 O THR 96 8.214 91.652 18.086 1.00138.93 O ATOM 735 N ALA 97 9.945 91.998 16.664 1.00 41.41 N ATOM 736 CA ALA 97 9.668 90.878 15.810 1.00 41.41 C ATOM 737 CB ALA 97 10.328 90.986 14.425 1.00 41.41 C ATOM 738 C ALA 97 10.178 89.629 16.456 1.00 41.41 C ATOM 739 O ALA 97 11.125 89.653 17.239 1.00 41.41 O ATOM 740 N ARG 98 9.531 88.494 16.125 1.00122.63 N ATOM 741 CA ARG 98 9.854 87.193 16.640 1.00122.63 C ATOM 742 CB ARG 98 8.639 86.251 16.603 1.00122.63 C ATOM 743 CG ARG 98 7.573 86.618 17.639 1.00122.63 C ATOM 744 CD ARG 98 6.143 86.211 17.270 1.00122.63 C ATOM 745 NE ARG 98 6.196 85.081 16.301 1.00122.63 N ATOM 746 CZ ARG 98 5.065 84.713 15.628 1.00122.63 C ATOM 747 NH1 ARG 98 3.897 85.388 15.833 1.00122.63 N ATOM 748 NH2 ARG 98 5.092 83.684 14.730 1.00122.63 N ATOM 749 C ARG 98 10.945 86.589 15.808 1.00122.63 C ATOM 750 O ARG 98 11.051 86.834 14.607 1.00122.63 O ATOM 751 N GLY 99 11.780 85.747 16.447 1.00 51.35 N ATOM 752 CA GLY 99 12.882 85.110 15.780 1.00 51.35 C ATOM 753 C GLY 99 12.349 84.248 14.676 1.00 51.35 C ATOM 754 O GLY 99 13.039 83.996 13.690 1.00 51.35 O ATOM 755 N TRP 100 11.168 83.648 14.911 1.00155.59 N ATOM 756 CA TRP 100 10.416 82.813 14.010 1.00155.59 C ATOM 757 CB TRP 100 9.647 81.674 14.703 1.00155.59 C ATOM 758 CG TRP 100 8.698 82.067 15.802 1.00155.59 C ATOM 759 CD2 TRP 100 9.099 82.288 17.161 1.00155.59 C ATOM 760 CD1 TRP 100 7.347 82.248 15.760 1.00155.59 C ATOM 761 NE1 TRP 100 6.879 82.562 17.013 1.00155.59 N ATOM 762 CE2 TRP 100 7.945 82.591 17.884 1.00155.59 C ATOM 763 CE3 TRP 100 10.326 82.238 17.757 1.00155.59 C ATOM 764 CZ2 TRP 100 8.001 82.850 19.224 1.00155.59 C ATOM 765 CZ3 TRP 100 10.378 82.501 19.108 1.00155.59 C ATOM 766 CH2 TRP 100 9.238 82.799 19.825 1.00155.59 C ATOM 767 C TRP 100 9.499 83.560 13.068 1.00155.59 C ATOM 768 O TRP 100 8.763 82.920 12.325 1.00155.59 O ATOM 769 N GLU 101 9.395 84.902 13.156 1.00114.94 N ATOM 770 CA GLU 101 8.418 85.659 12.400 1.00114.94 C ATOM 771 CB GLU 101 8.126 87.018 13.062 1.00114.94 C ATOM 772 CG GLU 101 7.075 87.864 12.344 1.00114.94 C ATOM 773 CD GLU 101 5.700 87.360 12.749 1.00114.94 C ATOM 774 OE1 GLU 101 5.600 86.698 13.815 1.00114.94 O ATOM 775 OE2 GLU 101 4.728 87.637 11.999 1.00114.94 O ATOM 776 C GLU 101 8.817 85.946 10.965 1.00114.94 C ATOM 777 O GLU 101 9.999 86.029 10.637 1.00114.94 O ATOM 778 N CYS 102 7.810 86.084 10.056 1.00 86.55 N ATOM 779 CA CYS 102 8.052 86.491 8.680 1.00 86.55 C ATOM 780 CB CYS 102 7.670 85.458 7.553 1.00 86.55 C ATOM 781 SG CYS 102 8.089 85.902 5.796 1.00 86.55 S ATOM 782 C CYS 102 7.243 87.735 8.443 1.00 86.55 C ATOM 783 O CYS 102 6.014 87.694 8.400 1.00 86.55 O ATOM 784 N THR 103 7.929 88.889 8.293 1.00 51.47 N ATOM 785 CA THR 103 7.237 90.128 8.082 1.00 51.47 C ATOM 786 CB THR 103 7.874 91.325 8.731 1.00 51.47 C ATOM 787 OG1 THR 103 9.161 91.561 8.182 1.00 51.47 O ATOM 788 CG2 THR 103 7.975 91.075 10.244 1.00 51.47 C ATOM 789 C THR 103 7.185 90.409 6.616 1.00 51.47 C ATOM 790 O THR 103 7.741 89.678 5.799 1.00 51.47 O ATOM 791 N LYS 104 6.490 91.503 6.256 1.00105.33 N ATOM 792 CA LYS 104 6.330 91.904 4.891 1.00105.33 C ATOM 793 CB LYS 104 5.368 93.094 4.749 1.00105.33 C ATOM 794 CG LYS 104 3.910 92.679 4.971 1.00105.33 C ATOM 795 CD LYS 104 2.962 93.834 5.294 1.00105.33 C ATOM 796 CE LYS 104 3.148 95.077 4.424 1.00105.33 C ATOM 797 NZ LYS 104 2.242 96.152 4.893 1.00105.33 N ATOM 798 C LYS 104 7.670 92.267 4.328 1.00105.33 C ATOM 799 O LYS 104 7.900 92.117 3.129 1.00105.33 O ATOM 800 N ASP 105 8.554 92.845 5.163 1.00 54.92 N ATOM 801 CA ASP 105 9.889 93.200 4.758 1.00 54.92 C ATOM 802 CB ASP 105 10.556 94.168 5.747 1.00 54.92 C ATOM 803 CG ASP 105 9.798 95.484 5.654 1.00 54.92 C ATOM 804 OD1 ASP 105 9.594 95.972 4.511 1.00 54.92 O ATOM 805 OD2 ASP 105 9.413 96.020 6.728 1.00 54.92 O ATOM 806 C ASP 105 10.763 91.985 4.645 1.00 54.92 C ATOM 807 O ASP 105 11.579 91.876 3.731 1.00 54.92 O ATOM 808 N ARG 106 10.600 91.033 5.584 1.00 74.49 N ATOM 809 CA ARG 106 11.419 89.857 5.672 1.00 74.49 C ATOM 810 CB ARG 106 11.120 88.996 6.913 1.00 74.49 C ATOM 811 CG ARG 106 11.602 89.631 8.220 1.00 74.49 C ATOM 812 CD ARG 106 11.460 88.717 9.438 1.00 74.49 C ATOM 813 NE ARG 106 12.026 89.449 10.606 1.00 74.49 N ATOM 814 CZ ARG 106 12.160 88.823 11.812 1.00 74.49 C ATOM 815 NH1 ARG 106 11.769 87.523 11.954 1.00 74.49 N ATOM 816 NH2 ARG 106 12.688 89.497 12.875 1.00 74.49 N ATOM 817 C ARG 106 11.228 89.005 4.463 1.00 74.49 C ATOM 818 O ARG 106 12.145 88.290 4.059 1.00 74.49 O ATOM 819 N CYS 107 10.019 89.038 3.872 1.00 99.19 N ATOM 820 CA CYS 107 9.742 88.220 2.728 1.00 99.19 C ATOM 821 CB CYS 107 8.371 88.508 2.092 1.00 99.19 C ATOM 822 SG CYS 107 6.993 88.082 3.197 1.00 99.19 S ATOM 823 C CYS 107 10.796 88.473 1.693 1.00 99.19 C ATOM 824 O CYS 107 10.905 89.572 1.150 1.00 99.19 O ATOM 825 N GLY 108 11.594 87.424 1.393 1.00 32.74 N ATOM 826 CA GLY 108 12.651 87.514 0.423 1.00 32.74 C ATOM 827 C GLY 108 13.844 88.206 1.023 1.00 32.74 C ATOM 828 O GLY 108 14.531 88.967 0.345 1.00 32.74 O ATOM 829 N GLU 109 14.137 87.936 2.311 1.00 52.89 N ATOM 830 CA GLU 109 15.195 88.611 3.015 1.00 52.89 C ATOM 831 CB GLU 109 15.216 88.280 4.518 1.00 52.89 C ATOM 832 CG GLU 109 15.428 86.793 4.812 1.00 52.89 C ATOM 833 CD GLU 109 15.267 86.576 6.310 1.00 52.89 C ATOM 834 OE1 GLU 109 14.968 87.569 7.026 1.00 52.89 O ATOM 835 OE2 GLU 109 15.436 85.411 6.760 1.00 52.89 O ATOM 836 C GLU 109 16.546 88.287 2.451 1.00 52.89 C ATOM 837 O GLU 109 16.827 87.160 2.042 1.00 52.89 O ATOM 838 N VAL 110 17.379 89.344 2.338 1.00 63.80 N ATOM 839 CA VAL 110 18.745 89.322 1.896 1.00 63.80 C ATOM 840 CB VAL 110 19.210 90.678 1.459 1.00 63.80 C ATOM 841 CG1 VAL 110 18.334 91.120 0.273 1.00 63.80 C ATOM 842 CG2 VAL 110 19.158 91.632 2.663 1.00 63.80 C ATOM 843 C VAL 110 19.687 88.850 2.968 1.00 63.80 C ATOM 844 O VAL 110 20.662 88.156 2.678 1.00 63.80 O ATOM 845 N ARG 111 19.457 89.253 4.238 1.00 88.12 N ATOM 846 CA ARG 111 20.402 88.885 5.257 1.00 88.12 C ATOM 847 CB ARG 111 21.437 89.988 5.554 1.00 88.12 C ATOM 848 CG ARG 111 22.466 89.617 6.626 1.00 88.12 C ATOM 849 CD ARG 111 23.604 90.636 6.759 1.00 88.12 C ATOM 850 NE ARG 111 24.454 90.223 7.914 1.00 88.12 N ATOM 851 CZ ARG 111 25.799 90.460 7.900 1.00 88.12 C ATOM 852 NH1 ARG 111 26.383 91.035 6.808 1.00 88.12 N ATOM 853 NH2 ARG 111 26.563 90.121 8.980 1.00 88.12 N ATOM 854 C ARG 111 19.662 88.586 6.523 1.00 88.12 C ATOM 855 O ARG 111 18.597 89.147 6.780 1.00 88.12 O ATOM 856 N ASN 112 20.205 87.658 7.340 1.00 78.97 N ATOM 857 CA ASN 112 19.544 87.288 8.564 1.00 78.97 C ATOM 858 CB ASN 112 18.713 86.001 8.379 1.00 78.97 C ATOM 859 CG ASN 112 17.930 85.676 9.642 1.00 78.97 C ATOM 860 OD1 ASN 112 18.431 85.783 10.759 1.00 78.97 O ATOM 861 ND2 ASN 112 16.653 85.245 9.457 1.00 78.97 N ATOM 862 C ASN 112 20.596 87.000 9.593 1.00 78.97 C ATOM 863 O ASN 112 21.218 85.939 9.552 1.00 78.97 O ATOM 864 N GLU 113 20.870 87.973 10.490 1.00 91.43 N ATOM 865 CA GLU 113 21.855 87.841 11.532 1.00 91.43 C ATOM 866 CB GLU 113 22.395 89.212 11.959 1.00 91.43 C ATOM 867 CG GLU 113 23.144 89.900 10.816 1.00 91.43 C ATOM 868 CD GLU 113 23.543 91.301 11.253 1.00 91.43 C ATOM 869 OE1 GLU 113 22.732 91.955 11.962 1.00 91.43 O ATOM 870 OE2 GLU 113 24.664 91.737 10.880 1.00 91.43 O ATOM 871 C GLU 113 21.364 87.126 12.753 1.00 91.43 C ATOM 872 O GLU 113 22.006 86.204 13.258 1.00 91.43 O ATOM 873 N GLU 114 20.201 87.541 13.289 1.00135.90 N ATOM 874 CA GLU 114 19.795 86.875 14.487 1.00135.90 C ATOM 875 CB GLU 114 20.192 87.624 15.774 1.00135.90 C ATOM 876 CG GLU 114 19.856 89.115 15.787 1.00135.90 C ATOM 877 CD GLU 114 20.526 89.717 17.014 1.00135.90 C ATOM 878 OE1 GLU 114 20.054 89.440 18.149 1.00135.90 O ATOM 879 OE2 GLU 114 21.529 90.461 16.833 1.00135.90 O ATOM 880 C GLU 114 18.331 86.617 14.445 1.00135.90 C ATOM 881 O GLU 114 17.510 87.394 14.931 1.00135.90 O ATOM 882 N ASN 115 17.987 85.467 13.844 1.00 55.47 N ATOM 883 CA ASN 115 16.633 85.025 13.765 1.00 55.47 C ATOM 884 CB ASN 115 15.902 85.511 12.502 1.00 55.47 C ATOM 885 CG ASN 115 15.644 87.006 12.653 1.00 55.47 C ATOM 886 OD1 ASN 115 14.795 87.429 13.436 1.00 55.47 O ATOM 887 ND2 ASN 115 16.402 87.833 11.884 1.00 55.47 N ATOM 888 C ASN 115 16.686 83.534 13.725 1.00 55.47 C ATOM 889 O ASN 115 17.496 82.948 13.008 1.00 55.47 O ATOM 890 N ALA 116 15.802 82.879 14.496 1.00 36.35 N ATOM 891 CA ALA 116 15.798 81.448 14.562 1.00 36.35 C ATOM 892 CB ALA 116 14.738 80.901 15.533 1.00 36.35 C ATOM 893 C ALA 116 15.494 80.892 13.203 1.00 36.35 C ATOM 894 O ALA 116 16.084 79.891 12.799 1.00 36.35 O ATOM 895 N CYS 117 14.564 81.527 12.459 1.00 45.13 N ATOM 896 CA CYS 117 14.166 81.006 11.179 1.00 45.13 C ATOM 897 CB CYS 117 12.668 80.665 11.108 1.00 45.13 C ATOM 898 SG CYS 117 12.200 79.359 12.283 1.00 45.13 S ATOM 899 C CYS 117 14.437 82.028 10.114 1.00 45.13 C ATOM 900 O CYS 117 14.848 83.151 10.402 1.00 45.13 O ATOM 901 N HIS 118 14.207 81.646 8.837 1.00 60.37 N ATOM 902 CA HIS 118 14.496 82.530 7.739 1.00 60.37 C ATOM 903 ND1 HIS 118 17.892 82.642 7.597 1.00 60.37 N ATOM 904 CG HIS 118 16.873 81.722 7.501 1.00 60.37 C ATOM 905 CB HIS 118 15.571 81.968 6.796 1.00 60.37 C ATOM 906 NE2 HIS 118 18.574 80.825 8.683 1.00 60.37 N ATOM 907 CD2 HIS 118 17.307 80.617 8.169 1.00 60.37 C ATOM 908 CE1 HIS 118 18.883 82.055 8.314 1.00 60.37 C ATOM 909 C HIS 118 13.251 82.757 6.928 1.00 60.37 C ATOM 910 O HIS 118 12.243 82.067 7.089 1.00 60.37 O ATOM 911 N CYS 119 13.291 83.777 6.042 1.00 79.24 N ATOM 912 CA CYS 119 12.142 84.096 5.239 1.00 79.24 C ATOM 913 CB CYS 119 11.531 85.450 5.631 1.00 79.24 C ATOM 914 SG CYS 119 11.036 85.490 7.380 1.00 79.24 S ATOM 915 C CYS 119 12.573 84.213 3.804 1.00 79.24 C ATOM 916 O CYS 119 12.499 85.298 3.225 1.00 79.24 O ATOM 917 N SER 120 12.998 83.089 3.185 1.00109.19 N ATOM 918 CA SER 120 13.448 83.108 1.818 1.00109.19 C ATOM 919 CB SER 120 14.965 83.301 1.664 1.00109.19 C ATOM 920 OG SER 120 15.384 84.526 2.238 1.00109.19 O ATOM 921 C SER 120 13.212 81.747 1.247 1.00109.19 C ATOM 922 O SER 120 12.978 80.782 1.967 1.00109.19 O ATOM 923 N GLU 121 13.320 81.617 -0.085 1.00 48.05 N ATOM 924 CA GLU 121 13.083 80.346 -0.702 1.00 48.05 C ATOM 925 CB GLU 121 13.167 80.367 -2.236 1.00 48.05 C ATOM 926 CG GLU 121 12.827 79.006 -2.846 1.00 48.05 C ATOM 927 CD GLU 121 12.804 79.145 -4.358 1.00 48.05 C ATOM 928 OE1 GLU 121 12.024 79.997 -4.859 1.00 48.05 O ATOM 929 OE2 GLU 121 13.568 78.401 -5.029 1.00 48.05 O ATOM 930 C GLU 121 14.101 79.369 -0.202 1.00 48.05 C ATOM 931 O GLU 121 13.829 78.174 -0.101 1.00 48.05 O ATOM 932 N ASP 122 15.304 79.862 0.136 1.00 47.75 N ATOM 933 CA ASP 122 16.389 79.015 0.539 1.00 47.75 C ATOM 934 CB ASP 122 17.629 79.821 0.970 1.00 47.75 C ATOM 935 CG ASP 122 18.208 80.530 -0.245 1.00 47.75 C ATOM 936 OD1 ASP 122 18.084 79.979 -1.371 1.00 47.75 O ATOM 937 OD2 ASP 122 18.783 81.637 -0.063 1.00 47.75 O ATOM 938 C ASP 122 15.974 78.211 1.732 1.00 47.75 C ATOM 939 O ASP 122 16.276 77.023 1.822 1.00 47.75 O ATOM 940 N CYS 123 15.245 78.838 2.673 1.00 62.30 N ATOM 941 CA CYS 123 14.881 78.206 3.907 1.00 62.30 C ATOM 942 CB CYS 123 14.230 79.160 4.925 1.00 62.30 C ATOM 943 SG CYS 123 12.515 79.597 4.520 1.00 62.30 S ATOM 944 C CYS 123 13.936 77.067 3.672 1.00 62.30 C ATOM 945 O CYS 123 13.851 76.166 4.501 1.00 62.30 O ATOM 946 N LEU 124 13.160 77.085 2.573 1.00103.34 N ATOM 947 CA LEU 124 12.203 76.032 2.362 1.00103.34 C ATOM 948 CB LEU 124 11.319 76.281 1.121 1.00103.34 C ATOM 949 CG LEU 124 10.090 75.352 0.954 1.00103.34 C ATOM 950 CD1 LEU 124 9.284 75.761 -0.283 1.00103.34 C ATOM 951 CD2 LEU 124 10.445 73.858 0.907 1.00103.34 C ATOM 952 C LEU 124 12.924 74.724 2.212 1.00103.34 C ATOM 953 O LEU 124 12.496 73.707 2.759 1.00103.34 O ATOM 954 N SER 125 14.033 74.698 1.450 1.00 25.38 N ATOM 955 CA SER 125 14.744 73.463 1.277 1.00 25.38 C ATOM 956 CB SER 125 15.883 73.570 0.250 1.00 25.38 C ATOM 957 OG SER 125 16.879 74.469 0.715 1.00 25.38 O ATOM 958 C SER 125 15.353 73.075 2.587 1.00 25.38 C ATOM 959 O SER 125 15.378 71.898 2.948 1.00 25.38 O ATOM 960 N ARG 126 15.862 74.077 3.327 1.00106.87 N ATOM 961 CA ARG 126 16.532 73.891 4.581 1.00106.87 C ATOM 962 CB ARG 126 17.230 75.176 5.057 1.00106.87 C ATOM 963 CG ARG 126 18.400 75.559 4.144 1.00106.87 C ATOM 964 CD ARG 126 19.137 76.833 4.561 1.00106.87 C ATOM 965 NE ARG 126 19.747 76.592 5.899 1.00106.87 N ATOM 966 CZ ARG 126 20.558 77.540 6.453 1.00106.87 C ATOM 967 NH1 ARG 126 20.862 78.674 5.757 1.00106.87 N ATOM 968 NH2 ARG 126 21.064 77.353 7.707 1.00106.87 N ATOM 969 C ARG 126 15.580 73.410 5.640 1.00106.87 C ATOM 970 O ARG 126 15.970 72.639 6.513 1.00106.87 O ATOM 971 N GLY 127 14.306 73.848 5.606 1.00 34.70 N ATOM 972 CA GLY 127 13.353 73.438 6.604 1.00 34.70 C ATOM 973 C GLY 127 13.367 74.435 7.730 1.00 34.70 C ATOM 974 O GLY 127 12.845 74.176 8.814 1.00 34.70 O ATOM 975 N ASP 128 14.033 75.578 7.483 1.00107.60 N ATOM 976 CA ASP 128 14.240 76.726 8.329 1.00107.60 C ATOM 977 CB ASP 128 15.503 77.501 7.940 1.00107.60 C ATOM 978 CG ASP 128 16.663 76.588 8.298 1.00107.60 C ATOM 979 OD1 ASP 128 16.620 75.991 9.406 1.00107.60 O ATOM 980 OD2 ASP 128 17.594 76.454 7.462 1.00107.60 O ATOM 981 C ASP 128 13.076 77.688 8.357 1.00107.60 C ATOM 982 O ASP 128 13.147 78.705 9.039 1.00107.60 O ATOM 983 N CYS 129 12.012 77.466 7.568 1.00 71.80 N ATOM 984 CA CYS 129 10.946 78.431 7.402 1.00 71.80 C ATOM 985 CB CYS 129 9.774 77.872 6.577 1.00 71.80 C ATOM 986 SG CYS 129 10.284 77.316 4.923 1.00 71.80 S ATOM 987 C CYS 129 10.363 78.925 8.700 1.00 71.80 C ATOM 988 O CYS 129 10.205 78.192 9.674 1.00 71.80 O ATOM 989 N CYS 130 10.024 80.233 8.717 1.00 49.34 N ATOM 990 CA CYS 130 9.387 80.894 9.825 1.00 49.34 C ATOM 991 CB CYS 130 9.350 82.426 9.686 1.00 49.34 C ATOM 992 SG CYS 130 11.011 83.167 9.682 1.00 49.34 S ATOM 993 C CYS 130 7.969 80.410 9.873 1.00 49.34 C ATOM 994 O CYS 130 7.469 79.822 8.916 1.00 49.34 O ATOM 995 N THR 131 7.279 80.660 11.004 1.00123.63 N ATOM 996 CA THR 131 5.951 80.157 11.208 1.00123.63 C ATOM 997 CB THR 131 5.383 80.542 12.543 1.00123.63 C ATOM 998 OG1 THR 131 5.311 81.955 12.662 1.00123.63 O ATOM 999 CG2 THR 131 6.283 79.965 13.647 1.00123.63 C ATOM 1000 C THR 131 5.022 80.669 10.152 1.00123.63 C ATOM 1001 O THR 131 4.250 79.896 9.589 1.00123.63 O ATOM 1002 N ASN 132 5.059 81.979 9.845 1.00162.31 N ATOM 1003 CA ASN 132 4.134 82.453 8.855 1.00162.31 C ATOM 1004 CB ASN 132 3.472 83.782 9.255 1.00162.31 C ATOM 1005 CG ASN 132 4.562 84.808 9.496 1.00162.31 C ATOM 1006 OD1 ASN 132 5.746 84.552 9.288 1.00162.31 O ATOM 1007 ND2 ASN 132 4.150 86.010 9.973 1.00162.31 N ATOM 1008 C ASN 132 4.842 82.628 7.550 1.00162.31 C ATOM 1009 O ASN 132 4.498 83.498 6.749 1.00162.31 O ATOM 1010 N TYR 133 5.820 81.744 7.285 1.00 79.54 N ATOM 1011 CA TYR 133 6.581 81.768 6.074 1.00 79.54 C ATOM 1012 CB TYR 133 7.691 80.698 6.097 1.00 79.54 C ATOM 1013 CG TYR 133 8.378 80.625 4.776 1.00 79.54 C ATOM 1014 CD1 TYR 133 9.363 81.524 4.434 1.00 79.54 C ATOM 1015 CD2 TYR 133 8.045 79.633 3.882 1.00 79.54 C ATOM 1016 CE1 TYR 133 9.997 81.440 3.215 1.00 79.54 C ATOM 1017 CE2 TYR 133 8.676 79.544 2.664 1.00 79.54 C ATOM 1018 CZ TYR 133 9.653 80.450 2.327 1.00 79.54 C ATOM 1019 OH TYR 133 10.300 80.356 1.077 1.00 79.54 O ATOM 1020 C TYR 133 5.670 81.474 4.928 1.00 79.54 C ATOM 1021 O TYR 133 5.651 82.179 3.918 1.00 79.54 O ATOM 1022 N GLN 134 4.847 80.432 5.096 1.00 52.84 N ATOM 1023 CA GLN 134 3.984 79.971 4.057 1.00 52.84 C ATOM 1024 CB GLN 134 3.212 78.703 4.462 1.00 52.84 C ATOM 1025 CG GLN 134 4.129 77.497 4.681 1.00 52.84 C ATOM 1026 CD GLN 134 3.278 76.305 5.095 1.00 52.84 C ATOM 1027 OE1 GLN 134 2.114 76.452 5.467 1.00 52.84 O ATOM 1028 NE2 GLN 134 3.878 75.085 5.038 1.00 52.84 N ATOM 1029 C GLN 134 2.995 81.037 3.731 1.00 52.84 C ATOM 1030 O GLN 134 2.531 81.104 2.596 1.00 52.84 O ATOM 1031 N VAL 135 2.555 81.810 4.743 1.00 77.15 N ATOM 1032 CA VAL 135 1.584 82.847 4.528 1.00 77.15 C ATOM 1033 CB VAL 135 0.980 83.303 5.823 1.00 77.15 C ATOM 1034 CG1 VAL 135 -0.032 84.424 5.536 1.00 77.15 C ATOM 1035 CG2 VAL 135 0.386 82.080 6.539 1.00 77.15 C ATOM 1036 C VAL 135 2.109 84.082 3.842 1.00 77.15 C ATOM 1037 O VAL 135 1.670 84.441 2.750 1.00 77.15 O ATOM 1038 N VAL 136 3.044 84.798 4.506 1.00141.31 N ATOM 1039 CA VAL 136 3.503 86.061 3.986 1.00141.31 C ATOM 1040 CB VAL 136 4.106 86.950 5.037 1.00141.31 C ATOM 1041 CG1 VAL 136 2.977 87.535 5.895 1.00141.31 C ATOM 1042 CG2 VAL 136 5.072 86.111 5.879 1.00141.31 C ATOM 1043 C VAL 136 4.461 85.947 2.852 1.00141.31 C ATOM 1044 O VAL 136 4.292 86.572 1.807 1.00141.31 O ATOM 1045 N CYS 137 5.523 85.160 3.063 1.00115.94 N ATOM 1046 CA CYS 137 6.587 85.052 2.123 1.00115.94 C ATOM 1047 CB CYS 137 7.794 84.406 2.857 1.00115.94 C ATOM 1048 SG CYS 137 7.534 84.253 4.685 1.00115.94 S ATOM 1049 C CYS 137 6.101 84.286 0.910 1.00115.94 C ATOM 1050 O CYS 137 6.257 84.719 -0.234 1.00115.94 O ATOM 1051 N LYS 138 5.433 83.131 1.114 1.00 97.52 N ATOM 1052 CA LYS 138 4.955 82.436 -0.047 1.00 97.52 C ATOM 1053 CB LYS 138 5.113 80.912 0.023 1.00 97.52 C ATOM 1054 CG LYS 138 6.562 80.464 -0.150 1.00 97.52 C ATOM 1055 CD LYS 138 6.778 78.987 0.162 1.00 97.52 C ATOM 1056 CE LYS 138 8.175 78.492 -0.207 1.00 97.52 C ATOM 1057 NZ LYS 138 8.306 78.385 -1.677 1.00 97.52 N ATOM 1058 C LYS 138 3.503 82.733 -0.203 1.00 97.52 C ATOM 1059 O LYS 138 2.645 81.960 0.218 1.00 97.52 O ATOM 1060 N GLY 139 3.192 83.862 -0.865 1.00 26.09 N ATOM 1061 CA GLY 139 1.821 84.228 -1.036 1.00 26.09 C ATOM 1062 C GLY 139 1.726 85.702 -0.806 1.00 26.09 C ATOM 1063 O GLY 139 2.741 86.393 -0.727 1.00 26.09 O ATOM 1064 N GLU 140 0.486 86.218 -0.696 1.00 90.08 N ATOM 1065 CA GLU 140 0.267 87.620 -0.482 1.00 90.08 C ATOM 1066 CB GLU 140 -1.222 88.003 -0.560 1.00 90.08 C ATOM 1067 CG GLU 140 -1.499 89.489 -0.337 1.00 90.08 C ATOM 1068 CD GLU 140 -1.056 90.241 -1.580 1.00 90.08 C ATOM 1069 OE1 GLU 140 -1.277 89.708 -2.700 1.00 90.08 O ATOM 1070 OE2 GLU 140 -0.488 91.355 -1.427 1.00 90.08 O ATOM 1071 C GLU 140 0.753 87.974 0.890 1.00 90.08 C ATOM 1072 O GLU 140 0.329 87.386 1.882 1.00 90.08 O TER 7142 ILE 887 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 51.53 70.5 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 57.40 67.7 62 100.0 62 ARMSMC BURIED . . . . . . . . 33.59 76.9 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.18 53.8 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 72.09 55.6 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 82.92 42.3 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 52.48 76.9 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.64 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 70.89 44.4 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 76.17 31.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 67.50 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.93 61.5 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 71.37 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 56.75 70.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 99.25 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.87 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 82.87 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 84.26 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 80.02 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.62 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.62 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0583 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.97 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.47 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.66 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 3.00 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.56 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.95 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.14 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.28 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.17 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.88 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 4.16 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.12 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 79.150 0.945 0.948 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 80.420 0.937 0.940 32 100.0 32 ERRCA BURIED . . . . . . . . 76.024 0.965 0.966 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 79.928 0.944 0.947 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 81.561 0.936 0.939 156 100.0 156 ERRMC BURIED . . . . . . . . 76.011 0.965 0.966 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 87.424 0.916 0.922 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 88.073 0.916 0.921 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 93.188 0.910 0.915 112 100.0 112 ERRSC BURIED . . . . . . . . 75.243 0.931 0.935 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 83.144 0.932 0.936 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 86.421 0.925 0.929 240 100.0 240 ERRALL BURIED . . . . . . . . 75.653 0.948 0.951 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 12 31 38 42 45 45 45 DISTCA CA (P) 26.67 68.89 84.44 93.33 100.00 45 DISTCA CA (RMS) 0.83 1.20 1.47 1.77 2.62 DISTCA ALL (N) 68 193 249 303 329 345 345 DISTALL ALL (P) 19.71 55.94 72.17 87.83 95.36 345 DISTALL ALL (RMS) 0.79 1.29 1.62 2.19 2.93 DISTALL END of the results output