####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS314_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS314_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 96 - 105 4.66 68.55 LONGEST_CONTINUOUS_SEGMENT: 10 99 - 108 4.83 62.14 LONGEST_CONTINUOUS_SEGMENT: 10 103 - 112 4.55 55.44 LONGEST_CONTINUOUS_SEGMENT: 10 104 - 113 4.29 54.10 LONGEST_CONTINUOUS_SEGMENT: 10 105 - 114 4.61 53.22 LONGEST_CONTINUOUS_SEGMENT: 10 107 - 116 4.74 50.74 LONGEST_CONTINUOUS_SEGMENT: 10 114 - 123 4.92 38.72 LONGEST_CONTINUOUS_SEGMENT: 10 126 - 135 4.67 58.37 LCS_AVERAGE: 21.53 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 107 - 113 1.91 53.04 LONGEST_CONTINUOUS_SEGMENT: 7 108 - 114 1.82 52.08 LCS_AVERAGE: 11.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.83 68.64 LONGEST_CONTINUOUS_SEGMENT: 5 110 - 114 0.84 52.19 LONGEST_CONTINUOUS_SEGMENT: 5 116 - 120 1.00 40.66 LCS_AVERAGE: 8.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 10 3 3 3 3 3 4 4 6 7 9 9 9 9 10 10 10 10 10 10 12 LCS_GDT A 97 A 97 3 5 10 3 3 3 4 4 5 5 6 7 9 9 9 9 10 10 10 10 10 10 12 LCS_GDT R 98 R 98 3 5 10 3 3 3 4 4 5 5 6 7 9 9 9 9 10 10 10 10 10 10 12 LCS_GDT G 99 G 99 3 6 10 3 3 3 4 6 6 6 7 7 9 9 9 10 10 10 10 10 10 11 12 LCS_GDT W 100 W 100 5 6 10 3 4 5 6 6 6 6 7 7 9 9 9 10 10 10 10 10 10 11 12 LCS_GDT E 101 E 101 5 6 10 3 4 5 6 6 6 6 7 7 9 9 9 10 10 10 10 10 11 11 12 LCS_GDT C 102 C 102 5 6 10 3 4 5 6 6 6 6 7 7 9 9 9 10 10 10 10 10 11 11 12 LCS_GDT T 103 T 103 5 6 10 3 4 5 6 6 6 6 7 7 9 9 9 10 10 10 10 11 11 11 12 LCS_GDT K 104 K 104 5 6 10 3 4 5 6 6 6 6 7 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT D 105 D 105 3 6 10 3 3 4 6 6 6 6 7 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT R 106 R 106 3 4 10 3 3 4 4 4 4 6 7 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT C 107 C 107 4 7 10 3 3 4 5 5 6 7 8 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT G 108 G 108 4 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT E 109 E 109 4 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT V 110 V 110 5 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 12 LCS_GDT R 111 R 111 5 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 11 LCS_GDT N 112 N 112 5 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 11 LCS_GDT E 113 E 113 5 7 10 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 11 11 LCS_GDT E 114 E 114 5 7 10 4 4 5 5 6 6 7 8 8 8 8 9 9 10 10 11 11 11 12 12 LCS_GDT N 115 N 115 4 5 10 4 4 4 4 5 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT A 116 A 116 5 6 10 4 4 5 5 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT C 117 C 117 5 6 10 4 4 5 5 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT H 118 H 118 5 6 10 4 4 5 5 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT C 119 C 119 5 6 10 4 4 5 5 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT S 120 S 120 5 6 10 3 4 5 5 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT E 121 E 121 4 6 10 3 4 4 4 6 6 6 7 8 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT D 122 D 122 4 5 10 1 4 4 4 4 4 6 7 7 8 8 9 9 9 10 10 11 11 12 12 LCS_GDT C 123 C 123 3 4 10 1 3 3 3 4 4 6 7 7 7 7 7 8 9 10 10 11 11 12 12 LCS_GDT L 124 L 124 3 4 9 0 3 3 3 4 4 6 7 7 7 7 7 8 9 10 10 11 11 12 12 LCS_GDT S 125 S 125 3 4 9 1 3 3 3 4 6 6 7 7 8 8 8 8 8 10 10 11 11 12 12 LCS_GDT R 126 R 126 3 5 10 0 3 5 5 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT G 127 G 127 4 5 10 0 3 5 5 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT D 128 D 128 4 5 10 3 3 5 5 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT C 129 C 129 4 5 10 3 3 5 5 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT C 130 C 130 4 5 10 3 3 5 5 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT T 131 T 131 3 5 10 2 3 3 4 5 6 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT N 132 N 132 3 5 10 1 3 3 4 5 5 7 7 7 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT Y 133 Y 133 3 4 10 0 3 3 4 4 4 5 6 6 7 8 8 9 10 10 10 11 11 11 11 LCS_GDT Q 134 Q 134 3 4 10 0 3 3 4 4 4 5 6 6 6 8 8 9 10 10 10 11 11 11 11 LCS_GDT V 135 V 135 3 3 10 0 3 3 3 3 3 5 6 6 7 8 8 9 10 10 10 11 11 11 11 LCS_GDT V 136 V 136 3 3 9 2 3 3 3 3 4 4 4 6 6 7 7 8 9 9 10 11 11 11 11 LCS_GDT C 137 C 137 3 4 8 0 3 3 3 4 4 4 4 5 5 7 7 8 8 9 9 10 10 10 11 LCS_GDT K 138 K 138 3 4 8 2 3 3 3 4 4 4 4 5 5 5 7 8 8 9 9 10 10 10 11 LCS_GDT G 139 G 139 3 4 7 0 3 3 3 4 4 4 4 5 5 5 5 7 7 9 9 10 10 10 11 LCS_GDT E 140 E 140 3 4 6 0 3 3 3 4 4 4 4 5 5 5 5 5 5 5 5 8 8 8 8 LCS_AVERAGE LCS_A: 13.98 ( 8.64 11.75 21.53 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 6 6 6 7 8 8 9 9 10 10 10 10 11 11 11 12 12 GDT PERCENT_AT 8.89 8.89 11.11 13.33 13.33 13.33 15.56 17.78 17.78 20.00 20.00 22.22 22.22 22.22 22.22 24.44 24.44 24.44 26.67 26.67 GDT RMS_LOCAL 0.35 0.35 0.83 1.15 1.15 1.15 1.82 2.57 2.57 3.95 3.95 4.29 4.29 4.29 4.29 5.09 5.09 5.09 6.20 6.20 GDT RMS_ALL_AT 52.68 52.68 68.64 52.48 52.48 52.48 52.08 52.65 52.65 69.82 69.82 54.10 54.10 54.10 54.10 53.78 53.78 53.78 38.70 38.70 # Checking swapping # possible swapping detected: E 109 E 109 # possible swapping detected: E 114 E 114 # possible swapping detected: D 128 D 128 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 55.285 0 0.681 0.847 57.110 0.000 0.000 LGA A 97 A 97 50.021 0 0.127 0.118 52.093 0.000 0.000 LGA R 98 R 98 43.546 0 0.699 1.345 45.741 0.000 0.000 LGA G 99 G 99 40.629 0 0.278 0.278 42.093 0.000 0.000 LGA W 100 W 100 37.480 0 0.589 1.139 42.046 0.000 0.000 LGA E 101 E 101 30.124 0 0.060 1.267 32.838 0.000 0.000 LGA C 102 C 102 25.471 0 0.136 0.258 27.566 0.000 0.000 LGA T 103 T 103 19.995 0 0.067 1.249 21.978 0.000 0.000 LGA K 104 K 104 14.733 0 0.641 1.199 16.667 0.000 0.000 LGA D 105 D 105 12.027 0 0.661 1.036 13.239 0.000 0.000 LGA R 106 R 106 11.188 0 0.697 0.627 20.687 1.905 0.693 LGA C 107 C 107 4.467 0 0.210 0.820 6.943 37.738 38.730 LGA G 108 G 108 0.969 0 0.612 0.612 1.857 79.405 79.405 LGA E 109 E 109 0.836 0 0.066 0.766 5.425 81.786 58.836 LGA V 110 V 110 1.563 0 0.033 0.072 2.375 79.286 76.599 LGA R 111 R 111 2.970 0 0.089 0.697 11.859 64.881 27.662 LGA N 112 N 112 0.890 0 0.058 0.765 4.817 79.524 62.619 LGA E 113 E 113 1.208 0 0.699 1.318 4.395 73.690 57.672 LGA E 114 E 114 4.199 0 0.697 1.063 5.954 34.286 42.593 LGA N 115 N 115 10.013 0 0.067 0.884 15.676 1.190 0.595 LGA A 116 A 116 13.141 0 0.605 0.602 14.881 0.000 0.000 LGA C 117 C 117 19.041 0 0.100 0.691 22.562 0.000 0.000 LGA H 118 H 118 22.528 0 0.091 1.216 26.282 0.000 0.000 LGA C 119 C 119 29.895 0 0.615 0.932 32.190 0.000 0.000 LGA S 120 S 120 32.904 0 0.073 0.201 34.961 0.000 0.000 LGA E 121 E 121 38.530 0 0.688 0.960 43.880 0.000 0.000 LGA D 122 D 122 38.227 0 0.667 1.118 38.842 0.000 0.000 LGA C 123 C 123 40.528 0 0.657 0.628 42.705 0.000 0.000 LGA L 124 L 124 45.582 0 0.629 1.092 52.193 0.000 0.000 LGA S 125 S 125 47.341 0 0.707 0.612 47.440 0.000 0.000 LGA R 126 R 126 47.487 0 0.709 0.935 48.972 0.000 0.000 LGA G 127 G 127 52.841 0 0.417 0.417 52.841 0.000 0.000 LGA D 128 D 128 52.733 0 0.419 1.073 55.092 0.000 0.000 LGA C 129 C 129 59.786 0 0.035 0.701 62.200 0.000 0.000 LGA C 130 C 130 63.126 0 0.064 0.127 66.233 0.000 0.000 LGA T 131 T 131 68.641 0 0.686 1.387 71.777 0.000 0.000 LGA N 132 N 132 74.924 0 0.655 1.234 78.111 0.000 0.000 LGA Y 133 Y 133 78.578 0 0.575 1.373 81.855 0.000 0.000 LGA Q 134 Q 134 85.281 0 0.672 1.077 88.594 0.000 0.000 LGA V 135 V 135 90.064 0 0.599 0.617 92.771 0.000 0.000 LGA V 136 V 136 93.043 0 0.644 1.462 95.165 0.000 0.000 LGA C 137 C 137 96.612 0 0.706 0.824 99.656 0.000 0.000 LGA K 138 K 138 102.222 0 0.661 1.057 104.697 0.000 0.000 LGA G 139 G 139 108.176 0 0.680 0.680 110.510 0.000 0.000 LGA E 140 E 140 110.828 0 0.105 1.001 111.838 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 37.802 37.800 37.870 11.860 9.898 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 8 2.57 16.111 15.063 0.300 LGA_LOCAL RMSD: 2.568 Number of atoms: 8 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 52.647 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 37.802 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.489384 * X + 0.806302 * Y + -0.332235 * Z + 130.132156 Y_new = -0.290788 * X + -0.208293 * Y + -0.933839 * Z + 65.820351 Z_new = -0.822159 * X + 0.553617 * Y + 0.132528 * Z + 84.599396 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.536138 0.965193 1.335833 [DEG: -30.7184 55.3015 76.5376 ] ZXZ: -0.341809 1.437878 -0.978168 [DEG: -19.5842 82.3843 -56.0449 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS314_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS314_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 8 2.57 15.063 37.80 REMARK ---------------------------------------------------------- MOLECULE T0543TS314_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsn:A ATOM 728 N THR 96 -18.519 102.330 -21.855 1.00 0.50 N ATOM 729 CA THR 96 -17.131 102.217 -21.533 1.00 0.50 C ATOM 730 CB THR 96 -16.571 103.436 -20.859 1.00 0.50 C ATOM 731 OG1 THR 96 -15.161 103.322 -20.731 1.00 0.50 O ATOM 732 CG2 THR 96 -17.223 103.583 -19.473 1.00 0.50 C ATOM 733 C THR 96 -16.947 101.072 -20.595 1.00 0.50 C ATOM 734 O THR 96 -17.716 100.889 -19.653 1.00 0.50 O ATOM 735 N ALA 97 -15.919 100.248 -20.863 1.00 0.50 N ATOM 736 CA ALA 97 -15.588 99.174 -19.979 1.00 0.50 C ATOM 737 CB ALA 97 -16.200 97.823 -20.386 1.00 0.50 C ATOM 738 C ALA 97 -14.107 99.030 -20.066 1.00 0.50 C ATOM 739 O ALA 97 -13.532 99.124 -21.150 1.00 0.50 O ATOM 740 N ARG 98 -13.437 98.819 -18.920 1.00 0.50 N ATOM 741 CA ARG 98 -12.017 98.660 -18.991 1.00 0.50 C ATOM 742 CB ARG 98 -11.262 99.959 -19.317 1.00 0.50 C ATOM 743 CG ARG 98 -11.489 101.070 -18.289 1.00 0.50 C ATOM 744 CD ARG 98 -10.696 102.344 -18.583 1.00 0.50 C ATOM 745 NE ARG 98 -11.154 102.865 -19.902 1.00 0.50 N ATOM 746 CZ ARG 98 -10.732 104.089 -20.332 1.00 0.50 C ATOM 747 NH1 ARG 98 -9.900 104.838 -19.549 1.00 0.50 H ATOM 748 NH2 ARG 98 -11.141 104.566 -21.545 1.00 0.50 H ATOM 749 C ARG 98 -11.536 98.201 -17.659 1.00 0.50 C ATOM 750 O ARG 98 -12.256 98.262 -16.665 1.00 0.50 O ATOM 751 N GLY 99 -10.288 97.699 -17.625 1.00 0.50 N ATOM 752 CA GLY 99 -9.699 97.290 -16.389 1.00 0.50 C ATOM 753 C GLY 99 -8.400 96.642 -16.727 1.00 0.50 C ATOM 754 O GLY 99 -8.359 95.655 -17.459 1.00 0.50 O ATOM 755 N TRP 100 -7.295 97.193 -16.195 1.00 0.50 N ATOM 756 CA TRP 100 -6.015 96.611 -16.450 1.00 0.50 C ATOM 757 CB TRP 100 -5.176 97.418 -17.459 1.00 0.50 C ATOM 758 CG TRP 100 -3.815 96.839 -17.756 1.00 0.50 C ATOM 759 CD2 TRP 100 -2.587 97.364 -17.228 1.00 0.50 C ATOM 760 CD1 TRP 100 -3.473 95.784 -18.550 1.00 0.50 C ATOM 761 NE1 TRP 100 -2.108 95.616 -18.546 1.00 0.50 N ATOM 762 CE2 TRP 100 -1.550 96.584 -17.737 1.00 0.50 C ATOM 763 CE3 TRP 100 -2.345 98.415 -16.390 1.00 0.50 C ATOM 764 CZ2 TRP 100 -0.248 96.843 -17.414 1.00 0.50 C ATOM 765 CZ3 TRP 100 -1.032 98.672 -16.065 1.00 0.50 C ATOM 766 CH2 TRP 100 -0.005 97.901 -16.567 1.00 0.50 H ATOM 767 C TRP 100 -5.275 96.594 -15.158 1.00 0.50 C ATOM 768 O TRP 100 -5.147 97.620 -14.493 1.00 0.50 O ATOM 769 N GLU 101 -4.783 95.409 -14.750 1.00 0.50 N ATOM 770 CA GLU 101 -4.024 95.364 -13.539 1.00 0.50 C ATOM 771 CB GLU 101 -4.829 94.868 -12.325 1.00 0.50 C ATOM 772 CG GLU 101 -4.066 94.964 -11.002 1.00 0.50 C ATOM 773 CD GLU 101 -4.052 96.426 -10.575 1.00 0.50 C ATOM 774 OE1 GLU 101 -5.090 97.111 -10.778 1.00 0.50 O ATOM 775 OE2 GLU 101 -3.002 96.877 -10.043 1.00 0.50 O ATOM 776 C GLU 101 -2.912 94.394 -13.755 1.00 0.50 C ATOM 777 O GLU 101 -3.144 93.230 -14.074 1.00 0.50 O ATOM 778 N CYS 102 -1.660 94.861 -13.603 1.00 0.50 N ATOM 779 CA CYS 102 -0.553 93.966 -13.738 1.00 0.50 C ATOM 780 CB CYS 102 0.239 94.153 -15.042 1.00 0.50 C ATOM 781 SG CYS 102 -0.747 93.755 -16.518 1.00 0.50 S ATOM 782 C CYS 102 0.373 94.282 -12.613 1.00 0.50 C ATOM 783 O CYS 102 0.927 95.377 -12.547 1.00 0.50 O ATOM 784 N THR 103 0.556 93.329 -11.681 1.00 0.50 N ATOM 785 CA THR 103 1.438 93.615 -10.593 1.00 0.50 C ATOM 786 CB THR 103 0.721 93.890 -9.303 1.00 0.50 C ATOM 787 OG1 THR 103 1.648 94.280 -8.301 1.00 0.50 O ATOM 788 CG2 THR 103 -0.028 92.618 -8.873 1.00 0.50 C ATOM 789 C THR 103 2.315 92.434 -10.365 1.00 0.50 C ATOM 790 O THR 103 1.870 91.289 -10.427 1.00 0.50 O ATOM 791 N LYS 104 3.610 92.695 -10.113 1.00 0.50 N ATOM 792 CA LYS 104 4.520 91.642 -9.782 1.00 0.50 C ATOM 793 CB LYS 104 5.512 91.299 -10.906 1.00 0.50 C ATOM 794 CG LYS 104 6.454 90.144 -10.559 1.00 0.50 C ATOM 795 CD LYS 104 7.193 89.576 -11.772 1.00 0.50 C ATOM 796 CE LYS 104 6.291 88.766 -12.705 1.00 0.50 C ATOM 797 NZ LYS 104 7.078 88.253 -13.850 1.00 0.50 N ATOM 798 C LYS 104 5.311 92.152 -8.628 1.00 0.50 C ATOM 799 O LYS 104 5.910 93.225 -8.706 1.00 0.50 O ATOM 800 N ASP 105 5.320 91.411 -7.506 1.00 0.50 N ATOM 801 CA ASP 105 6.066 91.891 -6.384 1.00 0.50 C ATOM 802 CB ASP 105 5.188 92.267 -5.177 1.00 0.50 C ATOM 803 CG ASP 105 6.048 93.022 -4.171 1.00 0.50 C ATOM 804 OD1 ASP 105 7.302 92.977 -4.300 1.00 0.50 O ATOM 805 OD2 ASP 105 5.458 93.666 -3.263 1.00 0.50 O ATOM 806 C ASP 105 6.995 90.808 -5.952 1.00 0.50 C ATOM 807 O ASP 105 6.570 89.699 -5.635 1.00 0.50 O ATOM 808 N ARG 106 8.307 91.110 -5.953 1.00 0.50 N ATOM 809 CA ARG 106 9.272 90.151 -5.511 1.00 0.50 C ATOM 810 CB ARG 106 10.695 90.448 -6.012 1.00 0.50 C ATOM 811 CG ARG 106 10.834 90.319 -7.531 1.00 0.50 C ATOM 812 CD ARG 106 12.226 90.673 -8.057 1.00 0.50 C ATOM 813 NE ARG 106 13.180 89.652 -7.540 1.00 0.50 N ATOM 814 CZ ARG 106 14.401 89.502 -8.133 1.00 0.50 C ATOM 815 NH1 ARG 106 14.738 90.272 -9.208 1.00 0.50 H ATOM 816 NH2 ARG 106 15.286 88.581 -7.649 1.00 0.50 H ATOM 817 C ARG 106 9.281 90.221 -4.021 1.00 0.50 C ATOM 818 O ARG 106 9.046 91.281 -3.443 1.00 0.50 O ATOM 819 N CYS 107 9.528 89.080 -3.353 1.00 0.50 N ATOM 820 CA CYS 107 9.519 89.103 -1.922 1.00 0.50 C ATOM 821 CB CYS 107 8.252 88.491 -1.304 1.00 0.50 C ATOM 822 SG CYS 107 8.095 86.718 -1.673 1.00 0.50 S ATOM 823 C CYS 107 10.670 88.293 -1.431 1.00 0.50 C ATOM 824 O CYS 107 11.440 87.734 -2.211 1.00 0.50 O ATOM 825 N GLY 108 10.815 88.240 -0.095 1.00 0.50 N ATOM 826 CA GLY 108 11.847 87.468 0.527 1.00 0.50 C ATOM 827 C GLY 108 12.929 88.403 0.945 1.00 0.50 C ATOM 828 O GLY 108 13.384 89.241 0.169 1.00 0.50 O ATOM 829 N GLU 109 13.371 88.264 2.208 1.00 0.50 N ATOM 830 CA GLU 109 14.437 89.073 2.710 1.00 0.50 C ATOM 831 CB GLU 109 14.045 89.945 3.915 1.00 0.50 C ATOM 832 CG GLU 109 13.069 91.073 3.577 1.00 0.50 C ATOM 833 CD GLU 109 12.785 91.833 4.864 1.00 0.50 C ATOM 834 OE1 GLU 109 13.476 91.552 5.881 1.00 0.50 O ATOM 835 OE2 GLU 109 11.873 92.701 4.851 1.00 0.50 O ATOM 836 C GLU 109 15.467 88.117 3.196 1.00 0.50 C ATOM 837 O GLU 109 15.140 87.069 3.750 1.00 0.50 O ATOM 838 N VAL 110 16.754 88.443 2.984 1.00 0.50 N ATOM 839 CA VAL 110 17.757 87.542 3.454 1.00 0.50 C ATOM 840 CB VAL 110 19.057 87.636 2.710 1.00 0.50 C ATOM 841 CG1 VAL 110 19.636 89.047 2.901 1.00 0.50 C ATOM 842 CG2 VAL 110 19.982 86.513 3.210 1.00 0.50 C ATOM 843 C VAL 110 18.022 87.893 4.876 1.00 0.50 C ATOM 844 O VAL 110 18.173 89.063 5.225 1.00 0.50 O ATOM 845 N ARG 111 18.056 86.870 5.746 1.00 0.50 N ATOM 846 CA ARG 111 18.325 87.126 7.125 1.00 0.50 C ATOM 847 CB ARG 111 17.286 86.520 8.082 1.00 0.50 C ATOM 848 CG ARG 111 15.927 87.219 8.037 1.00 0.50 C ATOM 849 CD ARG 111 14.906 86.603 8.993 1.00 0.50 C ATOM 850 NE ARG 111 13.706 87.484 8.997 1.00 0.50 N ATOM 851 CZ ARG 111 13.626 88.505 9.899 1.00 0.50 C ATOM 852 NH1 ARG 111 14.640 88.703 10.791 1.00 0.50 H ATOM 853 NH2 ARG 111 12.536 89.326 9.911 1.00 0.50 H ATOM 854 C ARG 111 19.632 86.482 7.423 1.00 0.50 C ATOM 855 O ARG 111 19.930 85.396 6.930 1.00 0.50 O ATOM 856 N ASN 112 20.463 87.160 8.233 1.00 0.50 N ATOM 857 CA ASN 112 21.740 86.605 8.554 1.00 0.50 C ATOM 858 CB ASN 112 22.885 87.625 8.434 1.00 0.50 C ATOM 859 CG ASN 112 24.206 86.882 8.535 1.00 0.50 C ATOM 860 OD1 ASN 112 24.272 85.763 9.043 1.00 0.50 O ATOM 861 ND2 ASN 112 25.297 87.525 8.039 1.00 0.50 N ATOM 862 C ASN 112 21.671 86.166 9.976 1.00 0.50 C ATOM 863 O ASN 112 21.240 86.919 10.848 1.00 0.50 O ATOM 864 N GLU 113 22.074 84.912 10.245 1.00 0.50 N ATOM 865 CA GLU 113 22.036 84.458 11.600 1.00 0.50 C ATOM 866 CB GLU 113 21.120 83.236 11.816 1.00 0.50 C ATOM 867 CG GLU 113 21.533 81.976 11.056 1.00 0.50 C ATOM 868 CD GLU 113 22.487 81.194 11.946 1.00 0.50 C ATOM 869 OE1 GLU 113 22.724 81.652 13.095 1.00 0.50 O ATOM 870 OE2 GLU 113 22.983 80.127 11.495 1.00 0.50 O ATOM 871 C GLU 113 23.435 84.111 11.981 1.00 0.50 C ATOM 872 O GLU 113 24.204 83.595 11.172 1.00 0.50 O ATOM 873 N GLU 114 23.811 84.426 13.233 1.00 0.50 N ATOM 874 CA GLU 114 25.144 84.147 13.672 1.00 0.50 C ATOM 875 CB GLU 114 25.876 85.376 14.236 1.00 0.50 C ATOM 876 CG GLU 114 26.188 86.445 13.189 1.00 0.50 C ATOM 877 CD GLU 114 26.830 87.620 13.913 1.00 0.50 C ATOM 878 OE1 GLU 114 26.859 87.592 15.172 1.00 0.50 O ATOM 879 OE2 GLU 114 27.294 88.564 13.218 1.00 0.50 O ATOM 880 C GLU 114 25.047 83.161 14.783 1.00 0.50 C ATOM 881 O GLU 114 24.069 83.142 15.530 1.00 0.50 O ATOM 882 N ASN 115 26.066 82.293 14.899 1.00 0.50 N ATOM 883 CA ASN 115 26.068 81.327 15.953 1.00 0.50 C ATOM 884 CB ASN 115 26.305 79.891 15.452 1.00 0.50 C ATOM 885 CG ASN 115 26.053 78.925 16.600 1.00 0.50 C ATOM 886 OD1 ASN 115 24.912 78.637 16.954 1.00 0.50 O ATOM 887 ND2 ASN 115 27.157 78.394 17.191 1.00 0.50 N ATOM 888 C ASN 115 27.197 81.695 16.858 1.00 0.50 C ATOM 889 O ASN 115 28.300 81.992 16.403 1.00 0.50 O ATOM 890 N ALA 116 26.936 81.713 18.179 1.00 0.50 N ATOM 891 CA ALA 116 27.969 82.062 19.105 1.00 0.50 C ATOM 892 CB ALA 116 27.459 82.325 20.532 1.00 0.50 C ATOM 893 C ALA 116 28.920 80.916 19.168 1.00 0.50 C ATOM 894 O ALA 116 28.527 79.759 19.021 1.00 0.50 O ATOM 895 N CYS 117 30.214 81.215 19.377 1.00 0.50 N ATOM 896 CA CYS 117 31.174 80.159 19.454 1.00 0.50 C ATOM 897 CB CYS 117 32.634 80.641 19.395 1.00 0.50 C ATOM 898 SG CYS 117 33.049 81.413 17.802 1.00 0.50 S ATOM 899 C CYS 117 30.976 79.483 20.767 1.00 0.50 C ATOM 900 O CYS 117 30.623 80.118 21.759 1.00 0.50 O ATOM 901 N HIS 118 31.184 78.155 20.795 1.00 0.50 N ATOM 902 CA HIS 118 31.030 77.436 22.022 1.00 0.50 C ATOM 903 ND1 HIS 118 28.920 75.677 24.003 1.00 0.50 N ATOM 904 CG HIS 118 30.000 75.438 23.181 1.00 0.50 C ATOM 905 CB HIS 118 30.229 76.133 21.873 1.00 0.50 C ATOM 906 NE2 HIS 118 30.162 74.136 25.016 1.00 0.50 N ATOM 907 CD2 HIS 118 30.748 74.495 23.815 1.00 0.50 C ATOM 908 CE1 HIS 118 29.067 74.871 25.084 1.00 0.50 C ATOM 909 C HIS 118 32.403 77.073 22.469 1.00 0.50 C ATOM 910 O HIS 118 33.232 76.640 21.670 1.00 0.50 O ATOM 911 N CYS 119 32.690 77.262 23.770 1.00 0.50 N ATOM 912 CA CYS 119 34.005 76.955 24.245 1.00 0.50 C ATOM 913 CB CYS 119 34.812 78.201 24.646 1.00 0.50 C ATOM 914 SG CYS 119 34.037 79.113 26.015 1.00 0.50 S ATOM 915 C CYS 119 33.873 76.110 25.466 1.00 0.50 C ATOM 916 O CYS 119 32.813 76.047 26.086 1.00 0.50 O ATOM 917 N SER 120 34.966 75.409 25.822 1.00 0.50 N ATOM 918 CA SER 120 34.969 74.611 27.010 1.00 0.50 C ATOM 919 CB SER 120 35.170 73.110 26.745 1.00 0.50 C ATOM 920 OG SER 120 36.454 72.885 26.182 1.00 0.50 O ATOM 921 C SER 120 36.135 75.079 27.814 1.00 0.50 C ATOM 922 O SER 120 37.189 75.395 27.265 1.00 0.50 O ATOM 923 N GLU 121 35.971 75.156 29.146 1.00 0.50 N ATOM 924 CA GLU 121 37.060 75.618 29.950 1.00 0.50 C ATOM 925 CB GLU 121 36.634 76.140 31.334 1.00 0.50 C ATOM 926 CG GLU 121 35.792 77.415 31.265 1.00 0.50 C ATOM 927 CD GLU 121 35.438 77.829 32.687 1.00 0.50 C ATOM 928 OE1 GLU 121 35.642 76.999 33.612 1.00 0.50 O ATOM 929 OE2 GLU 121 34.964 78.982 32.866 1.00 0.50 O ATOM 930 C GLU 121 38.002 74.481 30.159 1.00 0.50 C ATOM 931 O GLU 121 37.594 73.323 30.231 1.00 0.50 O ATOM 932 N ASP 122 39.309 74.798 30.234 1.00 0.50 N ATOM 933 CA ASP 122 40.307 73.801 30.472 1.00 0.50 C ATOM 934 CB ASP 122 41.523 73.898 29.533 1.00 0.50 C ATOM 935 CG ASP 122 41.100 73.453 28.140 1.00 0.50 C ATOM 936 OD1 ASP 122 39.979 72.892 28.007 1.00 0.50 O ATOM 937 OD2 ASP 122 41.901 73.661 27.190 1.00 0.50 O ATOM 938 C ASP 122 40.809 74.024 31.859 1.00 0.50 C ATOM 939 O ASP 122 40.966 75.164 32.295 1.00 0.50 O ATOM 940 N CYS 123 41.052 72.930 32.606 1.00 0.50 N ATOM 941 CA CYS 123 41.541 73.092 33.942 1.00 0.50 C ATOM 942 CB CYS 123 40.649 72.434 35.007 1.00 0.50 C ATOM 943 SG CYS 123 40.549 70.629 34.810 1.00 0.50 S ATOM 944 C CYS 123 42.877 72.432 34.022 1.00 0.50 C ATOM 945 O CYS 123 43.092 71.363 33.451 1.00 0.50 O ATOM 946 N LEU 124 43.827 73.082 34.723 1.00 0.50 N ATOM 947 CA LEU 124 45.126 72.503 34.891 1.00 0.50 C ATOM 948 CB LEU 124 46.256 73.355 34.275 1.00 0.50 C ATOM 949 CG LEU 124 47.667 72.729 34.337 1.00 0.50 C ATOM 950 CD1 LEU 124 48.224 72.660 35.770 1.00 0.50 C ATOM 951 CD2 LEU 124 47.696 71.370 33.621 1.00 0.50 C ATOM 952 C LEU 124 45.354 72.426 36.365 1.00 0.50 C ATOM 953 O LEU 124 45.034 73.361 37.098 1.00 0.50 O ATOM 954 N SER 125 45.895 71.291 36.846 1.00 0.50 N ATOM 955 CA SER 125 46.160 71.173 38.249 1.00 0.50 C ATOM 956 CB SER 125 45.181 70.244 38.986 1.00 0.50 C ATOM 957 OG SER 125 45.324 68.913 38.511 1.00 0.50 O ATOM 958 C SER 125 47.521 70.581 38.392 1.00 0.50 C ATOM 959 O SER 125 47.939 69.762 37.575 1.00 0.50 O ATOM 960 N ARG 126 48.264 70.999 39.436 1.00 0.50 N ATOM 961 CA ARG 126 49.576 70.455 39.624 1.00 0.50 C ATOM 962 CB ARG 126 50.651 71.145 38.771 1.00 0.50 C ATOM 963 CG ARG 126 50.489 70.909 37.269 1.00 0.50 C ATOM 964 CD ARG 126 51.564 71.600 36.429 1.00 0.50 C ATOM 965 NE ARG 126 51.292 71.282 35.000 1.00 0.50 N ATOM 966 CZ ARG 126 51.848 70.170 34.438 1.00 0.50 C ATOM 967 NH1 ARG 126 52.644 69.354 35.188 1.00 0.50 H ATOM 968 NH2 ARG 126 51.610 69.876 33.126 1.00 0.50 H ATOM 969 C ARG 126 49.964 70.657 41.053 1.00 0.50 C ATOM 970 O ARG 126 49.350 71.437 41.777 1.00 0.50 O ATOM 971 N GLY 127 51.006 69.921 41.490 1.00 0.50 N ATOM 972 CA GLY 127 51.535 70.054 42.815 1.00 0.50 C ATOM 973 C GLY 127 51.035 68.916 43.641 1.00 0.50 C ATOM 974 O GLY 127 49.836 68.789 43.887 1.00 0.50 O ATOM 975 N ASP 128 51.965 68.055 44.098 1.00 0.50 N ATOM 976 CA ASP 128 51.598 66.949 44.931 1.00 0.50 C ATOM 977 CB ASP 128 50.871 65.833 44.161 1.00 0.50 C ATOM 978 CG ASP 128 50.466 64.738 45.137 1.00 0.50 C ATOM 979 OD1 ASP 128 50.732 64.895 46.358 1.00 0.50 O ATOM 980 OD2 ASP 128 49.884 63.723 44.669 1.00 0.50 O ATOM 981 C ASP 128 52.868 66.364 45.461 1.00 0.50 C ATOM 982 O ASP 128 53.517 65.572 44.780 1.00 0.50 O ATOM 983 N CYS 129 53.276 66.744 46.688 1.00 0.50 N ATOM 984 CA CYS 129 54.489 66.176 47.198 1.00 0.50 C ATOM 985 CB CYS 129 55.730 67.039 46.911 1.00 0.50 C ATOM 986 SG CYS 129 55.626 68.681 47.686 1.00 0.50 S ATOM 987 C CYS 129 54.377 66.044 48.683 1.00 0.50 C ATOM 988 O CYS 129 53.790 66.893 49.351 1.00 0.50 O ATOM 989 N CYS 130 54.926 64.941 49.233 1.00 0.50 N ATOM 990 CA CYS 130 54.930 64.754 50.654 1.00 0.50 C ATOM 991 CB CYS 130 53.654 64.085 51.194 1.00 0.50 C ATOM 992 SG CYS 130 52.181 65.128 50.981 1.00 0.50 S ATOM 993 C CYS 130 56.075 63.846 50.976 1.00 0.50 C ATOM 994 O CYS 130 56.335 62.885 50.253 1.00 0.50 O ATOM 995 N THR 131 56.810 64.144 52.067 1.00 0.50 N ATOM 996 CA THR 131 57.906 63.299 52.444 1.00 0.50 C ATOM 997 CB THR 131 59.228 63.756 51.904 1.00 0.50 C ATOM 998 OG1 THR 131 60.233 62.792 52.187 1.00 0.50 O ATOM 999 CG2 THR 131 59.581 65.106 52.548 1.00 0.50 C ATOM 1000 C THR 131 58.008 63.313 53.935 1.00 0.50 C ATOM 1001 O THR 131 57.413 64.159 54.600 1.00 0.50 O ATOM 1002 N ASN 132 58.760 62.346 54.501 1.00 0.50 N ATOM 1003 CA ASN 132 58.939 62.310 55.924 1.00 0.50 C ATOM 1004 CB ASN 132 58.218 61.135 56.609 1.00 0.50 C ATOM 1005 CG ASN 132 58.849 59.841 56.117 1.00 0.50 C ATOM 1006 OD1 ASN 132 59.369 59.053 56.905 1.00 0.50 O ATOM 1007 ND2 ASN 132 58.804 59.612 54.776 1.00 0.50 N ATOM 1008 C ASN 132 60.401 62.129 56.184 1.00 0.50 C ATOM 1009 O ASN 132 61.088 61.428 55.443 1.00 0.50 O ATOM 1010 N TYR 133 60.922 62.783 57.241 1.00 0.50 N ATOM 1011 CA TYR 133 62.311 62.627 57.559 1.00 0.50 C ATOM 1012 CB TYR 133 63.171 63.863 57.244 1.00 0.50 C ATOM 1013 CG TYR 133 63.228 64.021 55.764 1.00 0.50 C ATOM 1014 CD1 TYR 133 62.213 64.650 55.082 1.00 0.50 C ATOM 1015 CD2 TYR 133 64.307 63.539 55.057 1.00 0.50 C ATOM 1016 CE1 TYR 133 62.273 64.794 53.715 1.00 0.50 C ATOM 1017 CE2 TYR 133 64.371 63.680 53.691 1.00 0.50 C ATOM 1018 CZ TYR 133 63.352 64.308 53.017 1.00 0.50 C ATOM 1019 OH TYR 133 63.416 64.455 51.616 1.00 0.50 H ATOM 1020 C TYR 133 62.430 62.381 59.028 1.00 0.50 C ATOM 1021 O TYR 133 61.629 62.875 59.821 1.00 0.50 O ATOM 1022 N GLN 134 63.438 61.578 59.422 1.00 0.50 N ATOM 1023 CA GLN 134 63.678 61.318 60.811 1.00 0.50 C ATOM 1024 CB GLN 134 63.421 59.858 61.223 1.00 0.50 C ATOM 1025 CG GLN 134 61.953 59.437 61.114 1.00 0.50 C ATOM 1026 CD GLN 134 61.171 60.156 62.206 1.00 0.50 C ATOM 1027 OE1 GLN 134 61.717 60.970 62.948 1.00 0.50 O ATOM 1028 NE2 GLN 134 59.850 59.847 62.307 1.00 0.50 N ATOM 1029 C GLN 134 65.127 61.595 61.046 1.00 0.50 C ATOM 1030 O GLN 134 65.955 61.394 60.159 1.00 0.50 O ATOM 1031 N VAL 135 65.474 62.092 62.250 1.00 0.50 N ATOM 1032 CA VAL 135 66.852 62.379 62.525 1.00 0.50 C ATOM 1033 CB VAL 135 67.135 63.847 62.651 1.00 0.50 C ATOM 1034 CG1 VAL 135 68.607 64.034 63.056 1.00 0.50 C ATOM 1035 CG2 VAL 135 66.757 64.530 61.326 1.00 0.50 C ATOM 1036 C VAL 135 67.198 61.749 63.836 1.00 0.50 C ATOM 1037 O VAL 135 66.364 61.664 64.735 1.00 0.50 O ATOM 1038 N VAL 136 68.450 61.267 63.966 1.00 0.50 N ATOM 1039 CA VAL 136 68.867 60.669 65.200 1.00 0.50 C ATOM 1040 CB VAL 136 68.712 59.179 65.221 1.00 0.50 C ATOM 1041 CG1 VAL 136 67.216 58.843 65.098 1.00 0.50 C ATOM 1042 CG2 VAL 136 69.579 58.583 64.101 1.00 0.50 C ATOM 1043 C VAL 136 70.322 60.957 65.370 1.00 0.50 C ATOM 1044 O VAL 136 71.029 61.229 64.401 1.00 0.50 O ATOM 1045 N CYS 137 70.808 60.927 66.625 1.00 0.50 N ATOM 1046 CA CYS 137 72.202 61.166 66.853 1.00 0.50 C ATOM 1047 CB CYS 137 72.499 62.571 67.401 1.00 0.50 C ATOM 1048 SG CYS 137 74.273 62.854 67.677 1.00 0.50 S ATOM 1049 C CYS 137 72.667 60.176 67.872 1.00 0.50 C ATOM 1050 O CYS 137 71.904 59.767 68.743 1.00 0.50 O ATOM 1051 N LYS 138 73.939 59.742 67.764 1.00 0.50 N ATOM 1052 CA LYS 138 74.475 58.814 68.716 1.00 0.50 C ATOM 1053 CB LYS 138 74.220 57.338 68.363 1.00 0.50 C ATOM 1054 CG LYS 138 72.749 56.925 68.420 1.00 0.50 C ATOM 1055 CD LYS 138 72.477 55.557 67.791 1.00 0.50 C ATOM 1056 CE LYS 138 73.088 54.394 68.578 1.00 0.50 C ATOM 1057 NZ LYS 138 72.771 53.110 67.915 1.00 0.50 N ATOM 1058 C LYS 138 75.959 58.989 68.725 1.00 0.50 C ATOM 1059 O LYS 138 76.535 59.521 67.778 1.00 0.50 O ATOM 1060 N GLY 139 76.619 58.559 69.820 1.00 0.50 N ATOM 1061 CA GLY 139 78.050 58.631 69.866 1.00 0.50 C ATOM 1062 C GLY 139 78.473 58.592 71.297 1.00 0.50 C ATOM 1063 O GLY 139 77.831 59.188 72.162 1.00 0.50 O ATOM 1064 N GLU 140 79.581 57.879 71.582 1.00 0.50 N ATOM 1065 CA GLU 140 80.081 57.825 72.924 1.00 0.50 C ATOM 1066 CB GLU 140 79.227 56.952 73.859 1.00 0.50 C ATOM 1067 CG GLU 140 79.719 56.935 75.307 1.00 0.50 C ATOM 1068 CD GLU 140 79.331 58.259 75.947 1.00 0.50 C ATOM 1069 OE1 GLU 140 78.752 59.116 75.227 1.00 0.50 O ATOM 1070 OE2 GLU 140 79.608 58.433 77.163 1.00 0.50 O ATOM 1071 C GLU 140 81.443 57.209 72.872 1.00 0.50 C ATOM 1072 O GLU 140 81.705 56.335 72.048 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 96.50 28.4 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 103.00 24.2 62 100.0 62 ARMSMC BURIED . . . . . . . . 78.88 38.5 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.73 38.5 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 94.31 36.1 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 95.91 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 86.01 46.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.94 47.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 74.68 55.6 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 86.04 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 67.88 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.06 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 62.32 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 57.63 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 71.34 66.7 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.20 66.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 89.20 66.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 108.78 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 14.33 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 37.80 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 37.80 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.8400 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 41.05 32 100.0 32 CRMSCA BURIED . . . . . . . . 28.24 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 37.70 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 40.98 156 100.0 156 CRMSMC BURIED . . . . . . . . 28.30 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 38.00 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 38.80 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 41.33 112 100.0 112 CRMSSC BURIED . . . . . . . . 29.79 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 37.90 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 41.19 240 100.0 240 CRMSALL BURIED . . . . . . . . 29.01 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 32.210 0.940 0.470 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 36.261 0.956 0.478 32 100.0 32 ERRCA BURIED . . . . . . . . 22.237 0.901 0.451 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 32.080 0.940 0.470 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 36.143 0.955 0.478 156 100.0 156 ERRMC BURIED . . . . . . . . 22.329 0.906 0.453 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 32.864 0.944 0.472 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 33.943 0.947 0.473 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 36.368 0.949 0.474 112 100.0 112 ERRSC BURIED . . . . . . . . 25.460 0.935 0.467 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 32.514 0.942 0.471 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 36.325 0.953 0.476 240 100.0 240 ERRALL BURIED . . . . . . . . 23.803 0.918 0.459 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 4 8 45 45 DISTCA CA (P) 0.00 0.00 2.22 8.89 17.78 45 DISTCA CA (RMS) 0.00 0.00 2.64 4.05 6.07 DISTCA ALL (N) 0 1 7 26 52 345 345 DISTALL ALL (P) 0.00 0.29 2.03 7.54 15.07 345 DISTALL ALL (RMS) 0.00 1.65 2.46 3.79 5.95 DISTALL END of the results output