####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS311_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS311_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 113 - 131 4.98 14.58 LONGEST_CONTINUOUS_SEGMENT: 19 114 - 132 4.82 14.32 LONGEST_CONTINUOUS_SEGMENT: 19 115 - 133 4.68 15.11 LCS_AVERAGE: 38.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 108 - 116 1.65 14.30 LCS_AVERAGE: 13.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 97 - 101 0.66 17.64 LONGEST_CONTINUOUS_SEGMENT: 5 111 - 115 0.99 16.09 LCS_AVERAGE: 8.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 12 3 3 3 3 3 4 4 6 7 8 8 8 10 11 12 12 15 16 18 19 LCS_GDT A 97 A 97 5 6 12 3 5 5 5 6 6 7 9 9 10 11 11 13 14 17 18 20 21 23 25 LCS_GDT R 98 R 98 5 6 17 4 5 5 5 6 8 8 9 9 10 11 13 15 15 19 22 25 26 30 33 LCS_GDT G 99 G 99 5 7 17 4 5 5 6 6 8 8 9 9 10 14 14 15 16 17 21 25 26 29 32 LCS_GDT W 100 W 100 5 7 17 4 5 5 6 6 8 8 10 11 12 14 15 15 16 17 18 21 22 28 29 LCS_GDT E 101 E 101 5 7 17 4 5 5 6 6 8 8 10 11 12 13 15 16 17 19 21 22 25 29 33 LCS_GDT C 102 C 102 4 7 17 3 4 4 5 6 8 8 10 11 12 14 15 16 18 21 23 25 29 31 33 LCS_GDT T 103 T 103 4 7 17 3 4 4 6 6 8 8 10 11 13 14 15 17 19 22 25 28 30 31 35 LCS_GDT K 104 K 104 4 7 17 4 5 5 6 6 8 8 9 11 13 14 15 17 19 22 25 28 30 32 35 LCS_GDT D 105 D 105 4 7 17 4 5 5 6 6 8 8 10 11 12 14 15 17 18 22 25 28 30 32 35 LCS_GDT R 106 R 106 4 7 17 4 5 5 5 6 7 7 8 9 12 14 15 15 16 17 23 24 27 31 35 LCS_GDT C 107 C 107 4 7 17 4 5 5 6 6 8 8 10 11 12 14 15 15 17 22 24 24 28 32 35 LCS_GDT G 108 G 108 4 9 17 3 4 4 9 10 10 11 11 11 12 14 15 15 16 18 22 24 26 29 32 LCS_GDT E 109 E 109 4 9 17 3 4 5 8 10 10 11 11 11 12 16 18 19 20 22 24 27 30 32 35 LCS_GDT V 110 V 110 4 9 17 3 5 6 9 10 10 11 11 11 12 16 18 19 20 22 24 26 28 32 35 LCS_GDT R 111 R 111 5 9 17 3 4 5 9 10 10 11 11 11 12 16 18 19 20 22 24 28 30 32 35 LCS_GDT N 112 N 112 5 9 17 3 5 6 9 10 10 11 11 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT E 113 E 113 5 9 19 3 5 6 9 10 10 11 11 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT E 114 E 114 5 9 19 3 5 6 9 10 10 11 11 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT N 115 N 115 5 9 19 3 4 6 9 10 10 11 11 13 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT A 116 A 116 4 9 19 3 4 5 9 10 10 11 11 13 14 15 18 19 20 22 25 28 30 32 35 LCS_GDT C 117 C 117 4 5 19 3 4 5 5 6 7 9 10 13 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT H 118 H 118 4 5 19 3 4 5 5 5 7 8 10 13 14 15 16 18 20 22 25 28 30 32 35 LCS_GDT C 119 C 119 3 5 19 3 4 5 5 5 6 7 9 11 14 15 16 17 18 19 19 19 20 22 25 LCS_GDT S 120 S 120 3 5 19 3 4 4 5 5 8 10 10 13 14 15 16 17 18 19 24 25 29 30 31 LCS_GDT E 121 E 121 3 4 19 3 4 4 5 7 8 10 10 13 14 15 16 17 19 21 25 26 30 31 35 LCS_GDT D 122 D 122 3 4 19 3 3 4 5 7 7 9 10 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT C 123 C 123 3 4 19 3 3 4 5 7 8 10 10 13 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT L 124 L 124 3 4 19 3 3 4 5 7 7 8 10 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT S 125 S 125 3 6 19 3 3 4 5 7 8 10 10 13 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT R 126 R 126 3 6 19 3 3 5 5 7 8 10 10 13 14 15 16 17 20 22 24 28 30 32 35 LCS_GDT G 127 G 127 3 6 19 3 3 5 5 7 8 11 11 13 14 15 16 17 20 22 24 28 30 32 35 LCS_GDT D 128 D 128 3 6 19 3 5 6 9 10 10 11 11 13 14 15 16 17 18 22 24 24 28 32 35 LCS_GDT C 129 C 129 3 6 19 3 4 5 5 8 9 10 11 13 14 15 18 19 20 22 25 28 30 32 35 LCS_GDT C 130 C 130 3 6 19 3 4 5 5 7 8 10 11 13 14 15 16 17 19 22 25 28 30 32 35 LCS_GDT T 131 T 131 3 6 19 3 3 5 5 6 8 10 10 12 14 15 16 17 19 22 24 28 30 32 35 LCS_GDT N 132 N 132 3 6 19 3 5 5 5 6 8 9 10 12 13 15 16 17 19 22 25 28 30 32 35 LCS_GDT Y 133 Y 133 3 5 19 3 3 4 4 6 8 8 10 12 13 15 16 17 19 22 25 28 30 32 35 LCS_GDT Q 134 Q 134 3 4 18 3 3 3 4 4 6 8 9 11 12 12 14 15 16 19 23 28 30 32 35 LCS_GDT V 135 V 135 3 4 16 3 3 3 4 4 5 6 8 10 10 12 14 15 17 22 25 28 30 32 35 LCS_GDT V 136 V 136 3 4 15 3 3 3 4 4 6 7 9 11 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT C 137 C 137 4 4 15 4 4 4 4 7 7 8 9 12 14 16 18 19 20 22 25 27 30 32 35 LCS_GDT K 138 K 138 4 4 11 4 4 4 5 7 7 8 10 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT G 139 G 139 4 4 11 4 4 4 5 7 7 9 10 12 14 16 18 19 20 22 25 28 30 32 35 LCS_GDT E 140 E 140 4 4 10 4 4 4 5 7 7 9 10 12 14 16 18 19 20 21 25 28 30 32 35 LCS_AVERAGE LCS_A: 20.10 ( 8.44 13.63 38.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 9 10 10 11 11 13 14 16 18 19 20 22 25 28 30 32 35 GDT PERCENT_AT 8.89 11.11 13.33 20.00 22.22 22.22 24.44 24.44 28.89 31.11 35.56 40.00 42.22 44.44 48.89 55.56 62.22 66.67 71.11 77.78 GDT RMS_LOCAL 0.14 0.39 0.83 1.41 1.65 1.65 2.11 2.11 3.17 3.38 4.16 4.44 4.56 4.73 5.50 6.28 6.72 6.85 7.13 7.43 GDT RMS_ALL_AT 19.83 19.70 14.81 14.54 14.31 14.31 14.03 14.03 15.51 15.41 12.45 12.71 12.71 12.87 12.62 10.26 10.13 10.13 10.68 10.35 # Checking swapping # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 30.455 0 0.665 0.881 31.143 0.000 0.000 LGA A 97 A 97 26.852 0 0.108 0.117 28.218 0.000 0.000 LGA R 98 R 98 22.338 0 0.674 1.009 24.066 0.000 0.000 LGA G 99 G 99 24.315 0 0.120 0.120 24.315 0.000 0.000 LGA W 100 W 100 23.985 0 0.654 1.013 27.484 0.000 0.000 LGA E 101 E 101 20.140 0 0.480 0.881 23.195 0.000 0.000 LGA C 102 C 102 15.883 0 0.039 0.128 19.459 0.000 0.000 LGA T 103 T 103 17.118 0 0.112 0.167 20.209 0.000 0.000 LGA K 104 K 104 15.756 0 0.616 1.059 16.863 0.000 0.000 LGA D 105 D 105 16.183 0 0.122 1.036 21.600 0.000 0.000 LGA R 106 R 106 11.564 0 0.121 1.003 14.357 0.476 0.173 LGA C 107 C 107 8.777 0 0.501 0.481 13.786 12.976 8.651 LGA G 108 G 108 2.233 0 0.204 0.204 4.512 62.857 62.857 LGA E 109 E 109 2.374 0 0.061 1.006 8.090 71.190 42.381 LGA V 110 V 110 2.016 0 0.069 0.081 5.302 79.524 58.980 LGA R 111 R 111 2.548 0 0.650 0.848 11.255 71.190 34.719 LGA N 112 N 112 0.799 0 0.066 0.978 3.057 85.952 79.821 LGA E 113 E 113 1.492 0 0.075 1.041 2.861 79.286 75.873 LGA E 114 E 114 0.818 0 0.181 1.119 4.978 86.071 72.963 LGA N 115 N 115 1.362 0 0.599 1.416 5.606 81.786 61.726 LGA A 116 A 116 2.502 0 0.045 0.073 5.404 65.000 57.238 LGA C 117 C 117 6.853 0 0.077 0.713 10.732 12.262 8.413 LGA H 118 H 118 12.329 0 0.070 1.223 14.717 0.000 0.000 LGA C 119 C 119 19.506 0 0.048 0.824 22.091 0.000 0.000 LGA S 120 S 120 19.404 0 0.594 0.783 19.662 0.000 0.000 LGA E 121 E 121 19.435 0 0.685 1.092 26.709 0.000 0.000 LGA D 122 D 122 13.102 0 0.560 0.521 15.106 0.000 0.000 LGA C 123 C 123 10.530 0 0.388 0.730 11.780 0.000 1.270 LGA L 124 L 124 14.612 0 0.380 1.461 20.287 0.000 0.000 LGA S 125 S 125 12.639 0 0.131 0.604 14.644 0.000 0.000 LGA R 126 R 126 8.574 0 0.547 0.561 20.680 7.381 2.684 LGA G 127 G 127 3.658 0 0.636 0.636 5.457 53.929 53.929 LGA D 128 D 128 1.694 0 0.639 1.120 3.816 67.143 58.631 LGA C 129 C 129 6.712 0 0.565 1.015 10.037 18.452 12.778 LGA C 130 C 130 7.799 0 0.084 0.168 9.353 6.190 4.603 LGA T 131 T 131 9.527 0 0.666 1.321 12.772 0.833 0.748 LGA N 132 N 132 11.788 0 0.404 0.994 12.113 0.000 0.000 LGA Y 133 Y 133 10.552 0 0.357 1.203 16.775 0.000 0.000 LGA Q 134 Q 134 11.854 0 0.603 1.196 13.639 0.000 0.000 LGA V 135 V 135 12.982 0 0.047 0.148 14.660 0.000 0.000 LGA V 136 V 136 10.397 0 0.570 1.018 14.087 0.000 0.068 LGA C 137 C 137 13.458 0 0.701 0.648 14.000 0.000 0.000 LGA K 138 K 138 15.205 0 0.610 0.929 17.509 0.000 0.000 LGA G 139 G 139 15.403 0 0.258 0.258 16.437 0.000 0.000 LGA E 140 E 140 15.890 0 0.581 0.813 17.412 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 9.491 9.515 9.950 19.167 15.522 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 11 2.11 27.778 23.982 0.497 LGA_LOCAL RMSD: 2.112 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.035 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 9.491 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.688513 * X + 0.601895 * Y + -0.404564 * Z + 19.849318 Y_new = 0.241481 * X + 0.335743 * Y + 0.910474 * Z + 58.897175 Z_new = 0.683840 * X + -0.724568 * Y + 0.085818 * Z + -11.724567 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.337323 -0.753012 -1.452906 [DEG: 19.3272 -43.1444 -83.2454 ] ZXZ: -2.723452 1.484873 2.385104 [DEG: -156.0423 85.0770 136.6564 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS311_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS311_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 11 2.11 23.982 9.49 REMARK ---------------------------------------------------------- MOLECULE T0543TS311_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 3ije_B 2gso_A 3ism_B ATOM 728 N THR 96 17.642 90.084 -11.408 1.00 79.22 N ATOM 729 CA THR 96 17.742 91.115 -10.421 1.00 79.22 C ATOM 730 CB THR 96 16.694 91.038 -9.356 1.00 79.22 C ATOM 731 OG1 THR 96 16.831 92.129 -8.459 1.00 79.22 O ATOM 732 CG2 THR 96 16.867 89.709 -8.613 1.00 79.22 C ATOM 733 C THR 96 19.075 91.020 -9.770 1.00 79.22 C ATOM 734 O THR 96 19.498 89.954 -9.326 1.00 79.22 O ATOM 735 N ALA 97 19.793 92.157 -9.743 1.00 79.22 N ATOM 736 CA ALA 97 21.034 92.189 -9.040 1.00 79.22 C ATOM 737 CB ALA 97 22.059 93.157 -9.656 1.00 79.22 C ATOM 738 C ALA 97 20.655 92.702 -7.695 1.00 79.22 C ATOM 739 O ALA 97 20.090 93.788 -7.572 1.00 79.22 O ATOM 740 N ARG 98 20.942 91.921 -6.641 1.00 79.22 N ATOM 741 CA ARG 98 20.455 92.354 -5.366 1.00 79.22 C ATOM 742 CB ARG 98 20.003 91.210 -4.441 1.00 79.22 C ATOM 743 CG ARG 98 19.470 91.729 -3.104 1.00 79.22 C ATOM 744 CD ARG 98 18.266 92.668 -3.242 1.00 79.22 C ATOM 745 NE ARG 98 18.070 93.368 -1.940 1.00 79.22 N ATOM 746 CZ ARG 98 16.878 93.956 -1.624 1.00 79.22 C ATOM 747 NH1 ARG 98 15.823 93.872 -2.488 1.00 79.22 H ATOM 748 NH2 ARG 98 16.747 94.644 -0.452 1.00 79.22 H ATOM 749 C ARG 98 21.500 93.148 -4.662 1.00 79.22 C ATOM 750 O ARG 98 22.687 93.063 -4.963 1.00 79.22 O ATOM 751 N GLY 99 21.057 93.975 -3.698 1.00 79.22 N ATOM 752 CA GLY 99 21.949 94.764 -2.914 1.00 79.22 C ATOM 753 C GLY 99 22.583 93.854 -1.918 1.00 79.22 C ATOM 754 O GLY 99 22.255 92.670 -1.835 1.00 79.22 O ATOM 755 N TRP 100 23.510 94.413 -1.118 1.00 79.22 N ATOM 756 CA TRP 100 24.256 93.626 -0.187 1.00 79.22 C ATOM 757 CB TRP 100 25.394 94.406 0.498 1.00 79.22 C ATOM 758 CG TRP 100 26.388 93.546 1.246 1.00 79.22 C ATOM 759 CD2 TRP 100 26.328 93.222 2.645 1.00 79.22 C ATOM 760 CD1 TRP 100 27.508 92.940 0.758 1.00 79.22 C ATOM 761 NE1 TRP 100 28.150 92.258 1.762 1.00 79.22 N ATOM 762 CE2 TRP 100 27.436 92.421 2.928 1.00 79.22 C ATOM 763 CE3 TRP 100 25.429 93.564 3.615 1.00 79.22 C ATOM 764 CZ2 TRP 100 27.660 91.945 4.188 1.00 79.22 C ATOM 765 CZ3 TRP 100 25.661 93.080 4.885 1.00 79.22 C ATOM 766 CH2 TRP 100 26.754 92.287 5.166 1.00 79.22 H ATOM 767 C TRP 100 23.327 93.125 0.868 1.00 79.22 C ATOM 768 O TRP 100 22.325 93.759 1.197 1.00 79.22 O ATOM 769 N GLU 101 23.658 91.938 1.407 1.00 79.22 N ATOM 770 CA GLU 101 22.914 91.279 2.437 1.00 79.22 C ATOM 771 CB GLU 101 22.850 92.064 3.760 1.00 79.22 C ATOM 772 CG GLU 101 22.300 91.231 4.921 1.00 79.22 C ATOM 773 CD GLU 101 22.322 92.079 6.185 1.00 79.22 C ATOM 774 OE1 GLU 101 21.476 93.005 6.295 1.00 79.22 O ATOM 775 OE2 GLU 101 23.189 91.809 7.060 1.00 79.22 O ATOM 776 C GLU 101 21.523 90.988 1.985 1.00 79.22 C ATOM 777 O GLU 101 20.582 91.032 2.775 1.00 79.22 O ATOM 778 N CYS 102 21.346 90.684 0.686 1.00 79.22 N ATOM 779 CA CYS 102 20.054 90.240 0.250 1.00 79.22 C ATOM 780 CB CYS 102 19.110 91.350 -0.213 1.00 79.22 C ATOM 781 SG CYS 102 18.636 92.473 1.134 1.00 79.22 S ATOM 782 C CYS 102 20.300 89.293 -0.872 1.00 79.22 C ATOM 783 O CYS 102 21.195 89.508 -1.686 1.00 79.22 O ATOM 784 N THR 103 19.529 88.193 -0.932 1.00 79.22 N ATOM 785 CA THR 103 19.765 87.230 -1.967 1.00 79.22 C ATOM 786 CB THR 103 20.572 86.045 -1.511 1.00 79.22 C ATOM 787 OG1 THR 103 19.904 85.371 -0.454 1.00 79.22 O ATOM 788 CG2 THR 103 21.954 86.534 -1.042 1.00 79.22 C ATOM 789 C THR 103 18.452 86.732 -2.462 1.00 79.22 C ATOM 790 O THR 103 17.397 87.231 -2.072 1.00 79.22 O ATOM 791 N LYS 104 18.515 85.754 -3.389 1.00 79.22 N ATOM 792 CA LYS 104 17.366 85.133 -3.975 1.00 79.22 C ATOM 793 CB LYS 104 16.121 85.026 -3.072 1.00 79.22 C ATOM 794 CG LYS 104 16.293 84.033 -1.922 1.00 79.22 C ATOM 795 CD LYS 104 15.140 84.044 -0.915 1.00 79.22 C ATOM 796 CE LYS 104 13.934 83.203 -1.347 1.00 79.22 C ATOM 797 NZ LYS 104 12.960 83.096 -0.237 1.00 79.22 N ATOM 798 C LYS 104 16.994 85.874 -5.209 1.00 79.22 C ATOM 799 O LYS 104 17.393 87.018 -5.420 1.00 79.22 O ATOM 800 N ASP 105 16.215 85.198 -6.072 1.00 79.22 N ATOM 801 CA ASP 105 15.801 85.760 -7.319 1.00 79.22 C ATOM 802 CB ASP 105 14.991 84.775 -8.179 1.00 79.22 C ATOM 803 CG ASP 105 15.958 83.713 -8.676 1.00 79.22 C ATOM 804 OD1 ASP 105 17.134 84.071 -8.955 1.00 79.22 O ATOM 805 OD2 ASP 105 15.538 82.530 -8.784 1.00 79.22 O ATOM 806 C ASP 105 14.941 86.953 -7.049 1.00 79.22 C ATOM 807 O ASP 105 14.975 87.925 -7.797 1.00 79.22 O ATOM 808 N ARG 106 14.107 86.894 -5.998 1.00 79.22 N ATOM 809 CA ARG 106 13.231 87.977 -5.640 1.00 79.22 C ATOM 810 CB ARG 106 12.151 87.570 -4.628 1.00 79.22 C ATOM 811 CG ARG 106 11.170 86.541 -5.191 1.00 79.22 C ATOM 812 CD ARG 106 10.019 86.213 -4.240 1.00 79.22 C ATOM 813 NE ARG 106 10.621 85.692 -2.980 1.00 79.22 N ATOM 814 CZ ARG 106 9.916 84.837 -2.185 1.00 79.22 C ATOM 815 NH1 ARG 106 8.678 84.411 -2.568 1.00 79.22 H ATOM 816 NH2 ARG 106 10.450 84.404 -1.005 1.00 79.22 H ATOM 817 C ARG 106 13.996 89.124 -5.054 1.00 79.22 C ATOM 818 O ARG 106 13.579 90.274 -5.194 1.00 79.22 O ATOM 819 N CYS 107 15.142 88.841 -4.398 1.00 79.22 N ATOM 820 CA CYS 107 15.868 89.856 -3.679 1.00 79.22 C ATOM 821 CB CYS 107 16.078 91.148 -4.484 1.00 79.22 C ATOM 822 SG CYS 107 17.276 90.945 -5.833 1.00 79.22 S ATOM 823 C CYS 107 15.074 90.210 -2.459 1.00 79.22 C ATOM 824 O CYS 107 15.253 91.278 -1.874 1.00 79.22 O ATOM 825 N GLY 108 14.111 89.336 -2.104 1.00 79.22 N ATOM 826 CA GLY 108 13.317 89.425 -0.910 1.00 79.22 C ATOM 827 C GLY 108 14.088 88.991 0.302 1.00 79.22 C ATOM 828 O GLY 108 13.905 89.536 1.391 1.00 79.22 O ATOM 829 N GLU 109 14.947 87.967 0.135 1.00 79.22 N ATOM 830 CA GLU 109 15.629 87.322 1.224 1.00 79.22 C ATOM 831 CB GLU 109 16.414 86.067 0.811 1.00 79.22 C ATOM 832 CG GLU 109 17.120 85.400 1.996 1.00 79.22 C ATOM 833 CD GLU 109 17.984 84.256 1.478 1.00 79.22 C ATOM 834 OE1 GLU 109 17.593 83.623 0.460 1.00 79.22 O ATOM 835 OE2 GLU 109 19.057 84.004 2.090 1.00 79.22 O ATOM 836 C GLU 109 16.621 88.212 1.889 1.00 79.22 C ATOM 837 O GLU 109 17.331 88.987 1.257 1.00 79.22 O ATOM 838 N VAL 110 16.701 88.084 3.226 1.00 79.22 N ATOM 839 CA VAL 110 17.659 88.806 4.002 1.00 79.22 C ATOM 840 CB VAL 110 17.094 89.403 5.248 1.00 79.22 C ATOM 841 CG1 VAL 110 16.564 88.248 6.105 1.00 79.22 C ATOM 842 CG2 VAL 110 18.187 90.231 5.942 1.00 79.22 C ATOM 843 C VAL 110 18.685 87.801 4.418 1.00 79.22 C ATOM 844 O VAL 110 18.388 86.617 4.556 1.00 79.22 O ATOM 845 N ARG 111 19.939 88.267 4.564 1.00 79.22 N ATOM 846 CA ARG 111 21.076 87.466 4.919 1.00 79.22 C ATOM 847 CB ARG 111 22.413 88.204 4.730 1.00 79.22 C ATOM 848 CG ARG 111 23.612 87.414 5.266 1.00 79.22 C ATOM 849 CD ARG 111 23.921 86.131 4.492 1.00 79.22 C ATOM 850 NE ARG 111 24.939 86.464 3.457 1.00 79.22 N ATOM 851 CZ ARG 111 25.899 85.550 3.127 1.00 79.22 C ATOM 852 NH1 ARG 111 25.916 84.329 3.735 1.00 79.22 H ATOM 853 NH2 ARG 111 26.844 85.861 2.192 1.00 79.22 H ATOM 854 C ARG 111 21.055 86.986 6.339 1.00 79.22 C ATOM 855 O ARG 111 21.540 85.891 6.610 1.00 79.22 O ATOM 856 N ASN 112 20.516 87.788 7.282 1.00 79.22 N ATOM 857 CA ASN 112 20.650 87.494 8.689 1.00 79.22 C ATOM 858 CB ASN 112 19.951 88.525 9.591 1.00 79.22 C ATOM 859 CG ASN 112 20.721 89.829 9.468 1.00 79.22 C ATOM 860 OD1 ASN 112 20.198 90.905 9.755 1.00 79.22 O ATOM 861 ND2 ASN 112 22.003 89.733 9.022 1.00 79.22 N ATOM 862 C ASN 112 20.136 86.135 9.070 1.00 79.22 C ATOM 863 O ASN 112 18.938 85.862 9.005 1.00 79.22 O ATOM 864 N GLU 113 21.085 85.243 9.437 1.00 79.22 N ATOM 865 CA GLU 113 20.905 83.905 9.942 1.00 79.22 C ATOM 866 CB GLU 113 22.165 83.047 9.714 1.00 79.22 C ATOM 867 CG GLU 113 22.042 81.585 10.142 1.00 79.22 C ATOM 868 CD GLU 113 23.221 80.836 9.531 1.00 79.22 C ATOM 869 OE1 GLU 113 23.318 80.801 8.276 1.00 79.22 O ATOM 870 OE2 GLU 113 24.047 80.293 10.315 1.00 79.22 O ATOM 871 C GLU 113 20.602 83.914 11.415 1.00 79.22 C ATOM 872 O GLU 113 19.882 83.055 11.923 1.00 79.22 O ATOM 873 N GLU 114 21.132 84.925 12.132 1.00 79.22 N ATOM 874 CA GLU 114 21.158 84.967 13.569 1.00 79.22 C ATOM 875 CB GLU 114 21.750 86.279 14.104 1.00 79.22 C ATOM 876 CG GLU 114 23.221 86.454 13.734 1.00 79.22 C ATOM 877 CD GLU 114 23.992 85.310 14.372 1.00 79.22 C ATOM 878 OE1 GLU 114 23.384 84.576 15.195 1.00 79.22 O ATOM 879 OE2 GLU 114 25.195 85.151 14.035 1.00 79.22 O ATOM 880 C GLU 114 19.801 84.836 14.172 1.00 79.22 C ATOM 881 O GLU 114 19.640 84.128 15.164 1.00 79.22 O ATOM 882 N ASN 115 18.782 85.505 13.609 1.00 79.22 N ATOM 883 CA ASN 115 17.499 85.423 14.237 1.00 79.22 C ATOM 884 CB ASN 115 16.407 86.236 13.520 1.00 79.22 C ATOM 885 CG ASN 115 15.137 86.153 14.361 1.00 79.22 C ATOM 886 OD1 ASN 115 14.471 85.120 14.417 1.00 79.22 O ATOM 887 ND2 ASN 115 14.799 87.274 15.055 1.00 79.22 N ATOM 888 C ASN 115 17.062 83.994 14.247 1.00 79.22 C ATOM 889 O ASN 115 16.530 83.506 15.243 1.00 79.22 O ATOM 890 N ALA 116 17.269 83.280 13.130 1.00 79.22 N ATOM 891 CA ALA 116 16.846 81.914 13.035 1.00 79.22 C ATOM 892 CB ALA 116 17.019 81.330 11.623 1.00 79.22 C ATOM 893 C ALA 116 17.625 81.049 13.978 1.00 79.22 C ATOM 894 O ALA 116 17.070 80.145 14.603 1.00 79.22 O ATOM 895 N CYS 117 18.943 81.293 14.099 1.00 79.22 N ATOM 896 CA CYS 117 19.780 80.434 14.884 1.00 79.22 C ATOM 897 CB CYS 117 21.274 80.582 14.562 1.00 79.22 C ATOM 898 SG CYS 117 21.662 80.093 12.855 1.00 79.22 S ATOM 899 C CYS 117 19.624 80.707 16.343 1.00 79.22 C ATOM 900 O CYS 117 19.294 81.815 16.763 1.00 79.22 O ATOM 901 N HIS 118 19.825 79.646 17.151 1.00 79.22 N ATOM 902 CA HIS 118 19.853 79.746 18.579 1.00 79.22 C ATOM 903 ND1 HIS 118 18.611 79.511 21.729 1.00 79.22 N ATOM 904 CG HIS 118 18.642 80.412 20.686 1.00 79.22 C ATOM 905 CB HIS 118 18.499 80.045 19.236 1.00 79.22 C ATOM 906 NE2 HIS 118 18.915 81.520 22.633 1.00 79.22 N ATOM 907 CD2 HIS 118 18.829 81.632 21.256 1.00 79.22 C ATOM 908 CE1 HIS 118 18.780 80.227 22.869 1.00 79.22 C ATOM 909 C HIS 118 20.301 78.409 19.063 1.00 79.22 C ATOM 910 O HIS 118 20.171 77.421 18.349 1.00 79.22 O ATOM 911 N CYS 119 20.894 78.358 20.271 1.00 79.22 N ATOM 912 CA CYS 119 21.335 77.136 20.886 1.00 79.22 C ATOM 913 CB CYS 119 20.204 76.195 21.363 1.00 79.22 C ATOM 914 SG CYS 119 19.317 75.297 20.051 1.00 79.22 S ATOM 915 C CYS 119 22.250 76.413 19.952 1.00 79.22 C ATOM 916 O CYS 119 22.331 75.185 19.965 1.00 79.22 O ATOM 917 N SER 120 22.984 77.177 19.124 1.00 79.22 N ATOM 918 CA SER 120 23.929 76.622 18.202 1.00 79.22 C ATOM 919 CB SER 120 25.056 75.834 18.895 1.00 79.22 C ATOM 920 OG SER 120 25.792 76.685 19.763 1.00 79.22 O ATOM 921 C SER 120 23.213 75.697 17.272 1.00 79.22 C ATOM 922 O SER 120 23.829 74.837 16.647 1.00 79.22 O ATOM 923 N GLU 121 21.885 75.857 17.133 1.00 79.22 N ATOM 924 CA GLU 121 21.157 75.010 16.239 1.00 79.22 C ATOM 925 CB GLU 121 20.216 74.035 16.963 1.00 79.22 C ATOM 926 CG GLU 121 20.963 73.033 17.844 1.00 79.22 C ATOM 927 CD GLU 121 19.944 72.341 18.737 1.00 79.22 C ATOM 928 OE1 GLU 121 18.883 71.919 18.204 1.00 79.22 O ATOM 929 OE2 GLU 121 20.208 72.229 19.963 1.00 79.22 O ATOM 930 C GLU 121 20.303 75.903 15.400 1.00 79.22 C ATOM 931 O GLU 121 19.747 76.882 15.893 1.00 79.22 O ATOM 932 N ASP 122 20.198 75.600 14.092 1.00 79.22 N ATOM 933 CA ASP 122 19.379 76.408 13.239 1.00 79.22 C ATOM 934 CB ASP 122 19.724 76.257 11.743 1.00 79.22 C ATOM 935 CG ASP 122 19.546 74.806 11.306 1.00 79.22 C ATOM 936 OD1 ASP 122 19.645 73.901 12.175 1.00 79.22 O ATOM 937 OD2 ASP 122 19.307 74.584 10.089 1.00 79.22 O ATOM 938 C ASP 122 17.947 76.036 13.451 1.00 79.22 C ATOM 939 O ASP 122 17.528 74.921 13.151 1.00 79.22 O ATOM 940 N CYS 123 17.158 76.980 14.001 1.00 79.22 N ATOM 941 CA CYS 123 15.749 76.775 14.195 1.00 79.22 C ATOM 942 CB CYS 123 14.942 76.728 12.888 1.00 79.22 C ATOM 943 SG CYS 123 14.912 78.328 12.027 1.00 79.22 S ATOM 944 C CYS 123 15.516 75.489 14.928 1.00 79.22 C ATOM 945 O CYS 123 14.598 74.737 14.597 1.00 79.22 O ATOM 946 N LEU 124 16.345 75.213 15.948 1.00 79.22 N ATOM 947 CA LEU 124 16.223 74.036 16.760 1.00 79.22 C ATOM 948 CB LEU 124 14.938 73.970 17.599 1.00 79.22 C ATOM 949 CG LEU 124 14.965 72.818 18.623 1.00 79.22 C ATOM 950 CD1 LEU 124 16.106 72.999 19.642 1.00 79.22 C ATOM 951 CD2 LEU 124 13.602 72.637 19.301 1.00 79.22 C ATOM 952 C LEU 124 16.304 72.820 15.896 1.00 79.22 C ATOM 953 O LEU 124 15.724 71.777 16.199 1.00 79.22 O ATOM 954 N SER 125 17.035 72.936 14.778 1.00 79.22 N ATOM 955 CA SER 125 17.278 71.831 13.904 1.00 79.22 C ATOM 956 CB SER 125 17.973 70.656 14.612 1.00 79.22 C ATOM 957 OG SER 125 19.269 71.041 15.038 1.00 79.22 O ATOM 958 C SER 125 15.991 71.341 13.335 1.00 79.22 C ATOM 959 O SER 125 15.964 70.301 12.678 1.00 79.22 O ATOM 960 N ARG 126 14.883 72.072 13.550 1.00 79.22 N ATOM 961 CA ARG 126 13.672 71.614 12.943 1.00 79.22 C ATOM 962 CB ARG 126 12.649 71.052 13.940 1.00 79.22 C ATOM 963 CG ARG 126 13.144 69.771 14.612 1.00 79.22 C ATOM 964 CD ARG 126 12.039 68.955 15.282 1.00 79.22 C ATOM 965 NE ARG 126 12.697 67.816 15.981 1.00 79.22 N ATOM 966 CZ ARG 126 11.955 66.977 16.760 1.00 79.22 C ATOM 967 NH1 ARG 126 10.606 67.156 16.870 1.00 79.22 H ATOM 968 NH2 ARG 126 12.562 65.960 17.437 1.00 79.22 H ATOM 969 C ARG 126 13.047 72.771 12.245 1.00 79.22 C ATOM 970 O ARG 126 12.390 73.610 12.860 1.00 79.22 O ATOM 971 N GLY 127 13.211 72.820 10.914 1.00 79.22 N ATOM 972 CA GLY 127 12.676 73.907 10.154 1.00 79.22 C ATOM 973 C GLY 127 13.765 74.343 9.238 1.00 79.22 C ATOM 974 O GLY 127 14.884 73.833 9.310 1.00 79.22 O ATOM 975 N ASP 128 13.476 75.318 8.360 1.00 79.22 N ATOM 976 CA ASP 128 14.511 75.753 7.473 1.00 79.22 C ATOM 977 CB ASP 128 14.079 76.864 6.499 1.00 79.22 C ATOM 978 CG ASP 128 15.144 77.049 5.419 1.00 79.22 C ATOM 979 OD1 ASP 128 16.136 76.273 5.402 1.00 79.22 O ATOM 980 OD2 ASP 128 14.962 77.974 4.581 1.00 79.22 O ATOM 981 C ASP 128 15.561 76.319 8.356 1.00 79.22 C ATOM 982 O ASP 128 15.256 76.848 9.423 1.00 79.22 O ATOM 983 N CYS 129 16.830 76.203 7.926 1.00 79.22 N ATOM 984 CA CYS 129 17.906 76.716 8.713 1.00 79.22 C ATOM 985 CB CYS 129 19.257 76.606 7.994 1.00 79.22 C ATOM 986 SG CYS 129 20.633 77.260 8.984 1.00 79.22 S ATOM 987 C CYS 129 17.598 78.155 8.890 1.00 79.22 C ATOM 988 O CYS 129 17.627 78.675 10.005 1.00 79.22 O ATOM 989 N CYS 130 17.258 78.832 7.784 1.00 79.22 N ATOM 990 CA CYS 130 16.864 80.194 7.932 1.00 79.22 C ATOM 991 CB CYS 130 18.023 81.206 7.947 1.00 79.22 C ATOM 992 SG CYS 130 19.113 81.043 9.390 1.00 79.22 S ATOM 993 C CYS 130 16.051 80.578 6.747 1.00 79.22 C ATOM 994 O CYS 130 16.393 80.269 5.607 1.00 79.22 O ATOM 995 N THR 131 14.926 81.261 7.010 1.00 79.22 N ATOM 996 CA THR 131 14.178 81.837 5.944 1.00 79.22 C ATOM 997 CB THR 131 12.709 81.921 6.209 1.00 79.22 C ATOM 998 OG1 THR 131 12.028 82.422 5.067 1.00 79.22 O ATOM 999 CG2 THR 131 12.496 82.860 7.395 1.00 79.22 C ATOM 1000 C THR 131 14.734 83.218 5.898 1.00 79.22 C ATOM 1001 O THR 131 15.874 83.417 6.308 1.00 79.22 O ATOM 1002 N ASN 132 13.977 84.213 5.407 1.00 79.22 N ATOM 1003 CA ASN 132 14.554 85.520 5.379 1.00 79.22 C ATOM 1004 CB ASN 132 13.752 86.504 4.512 1.00 79.22 C ATOM 1005 CG ASN 132 13.765 85.978 3.087 1.00 79.22 C ATOM 1006 OD1 ASN 132 14.500 85.050 2.752 1.00 79.22 O ATOM 1007 ND2 ASN 132 12.927 86.597 2.214 1.00 79.22 N ATOM 1008 C ASN 132 14.540 86.056 6.774 1.00 79.22 C ATOM 1009 O ASN 132 13.640 86.805 7.148 1.00 79.22 O ATOM 1010 N TYR 133 15.566 85.698 7.571 1.00 79.22 N ATOM 1011 CA TYR 133 15.722 86.205 8.905 1.00 79.22 C ATOM 1012 CB TYR 133 15.738 87.753 8.881 1.00 79.22 C ATOM 1013 CG TYR 133 15.970 88.373 10.218 1.00 79.22 C ATOM 1014 CD1 TYR 133 17.235 88.426 10.757 1.00 79.22 C ATOM 1015 CD2 TYR 133 14.922 88.927 10.916 1.00 79.22 C ATOM 1016 CE1 TYR 133 17.447 89.012 11.984 1.00 79.22 C ATOM 1017 CE2 TYR 133 15.129 89.513 12.142 1.00 79.22 C ATOM 1018 CZ TYR 133 16.392 89.552 12.680 1.00 79.22 C ATOM 1019 OH TYR 133 16.597 90.155 13.939 1.00 79.22 H ATOM 1020 C TYR 133 14.604 85.715 9.779 1.00 79.22 C ATOM 1021 O TYR 133 14.404 86.231 10.878 1.00 79.22 O ATOM 1022 N GLN 134 13.850 84.675 9.368 1.00 79.22 N ATOM 1023 CA GLN 134 12.846 84.284 10.311 1.00 79.22 C ATOM 1024 CB GLN 134 11.439 84.917 10.139 1.00 79.22 C ATOM 1025 CG GLN 134 10.632 84.574 8.888 1.00 79.22 C ATOM 1026 CD GLN 134 9.324 85.347 9.008 1.00 79.22 C ATOM 1027 OE1 GLN 134 9.268 86.363 9.700 1.00 79.22 O ATOM 1028 NE2 GLN 134 8.247 84.866 8.328 1.00 79.22 N ATOM 1029 C GLN 134 12.761 82.796 10.439 1.00 79.22 C ATOM 1030 O GLN 134 13.499 82.038 9.809 1.00 79.22 O ATOM 1031 N VAL 135 11.830 82.375 11.309 1.00 79.22 N ATOM 1032 CA VAL 135 11.637 81.044 11.798 1.00 79.22 C ATOM 1033 CB VAL 135 10.398 80.966 12.638 1.00 79.22 C ATOM 1034 CG1 VAL 135 10.239 79.530 13.156 1.00 79.22 C ATOM 1035 CG2 VAL 135 10.408 82.093 13.687 1.00 79.22 C ATOM 1036 C VAL 135 11.406 80.055 10.714 1.00 79.22 C ATOM 1037 O VAL 135 12.118 79.054 10.668 1.00 79.22 O ATOM 1038 N VAL 136 10.450 80.349 9.804 1.00 79.22 N ATOM 1039 CA VAL 136 9.935 79.443 8.805 1.00 79.22 C ATOM 1040 CB VAL 136 10.651 79.552 7.486 1.00 79.22 C ATOM 1041 CG1 VAL 136 12.163 79.342 7.695 1.00 79.22 C ATOM 1042 CG2 VAL 136 10.017 78.548 6.515 1.00 79.22 C ATOM 1043 C VAL 136 10.007 78.041 9.323 1.00 79.22 C ATOM 1044 O VAL 136 11.003 77.342 9.157 1.00 79.22 O ATOM 1045 N CYS 137 8.913 77.595 9.964 1.00 79.22 N ATOM 1046 CA CYS 137 8.897 76.314 10.597 1.00 79.22 C ATOM 1047 CB CYS 137 7.687 76.117 11.525 1.00 79.22 C ATOM 1048 SG CYS 137 7.662 77.328 12.881 1.00 79.22 S ATOM 1049 C CYS 137 8.840 75.266 9.544 1.00 79.22 C ATOM 1050 O CYS 137 8.302 75.485 8.460 1.00 79.22 O ATOM 1051 N LYS 138 9.427 74.088 9.836 1.00 79.22 N ATOM 1052 CA LYS 138 9.351 73.040 8.872 1.00 79.22 C ATOM 1053 CB LYS 138 10.160 71.785 9.245 1.00 79.22 C ATOM 1054 CG LYS 138 10.340 70.819 8.074 1.00 79.22 C ATOM 1055 CD LYS 138 11.179 71.404 6.934 1.00 79.22 C ATOM 1056 CE LYS 138 11.447 70.420 5.792 1.00 79.22 C ATOM 1057 NZ LYS 138 12.417 69.387 6.223 1.00 79.22 N ATOM 1058 C LYS 138 7.909 72.681 8.811 1.00 79.22 C ATOM 1059 O LYS 138 7.231 72.604 9.835 1.00 79.22 O ATOM 1060 N GLY 139 7.395 72.477 7.591 1.00 79.22 N ATOM 1061 CA GLY 139 6.000 72.205 7.436 1.00 79.22 C ATOM 1062 C GLY 139 5.658 70.919 8.110 1.00 79.22 C ATOM 1063 O GLY 139 4.612 70.802 8.745 1.00 79.22 O ATOM 1064 N GLU 140 6.536 69.908 7.989 1.00 79.22 N ATOM 1065 CA GLU 140 6.216 68.601 8.487 1.00 79.22 C ATOM 1066 CB GLU 140 7.278 67.553 8.124 1.00 79.22 C ATOM 1067 CG GLU 140 7.354 67.274 6.621 1.00 79.22 C ATOM 1068 CD GLU 140 8.431 66.226 6.384 1.00 79.22 C ATOM 1069 OE1 GLU 140 9.562 66.407 6.911 1.00 79.22 O ATOM 1070 OE2 GLU 140 8.132 65.225 5.680 1.00 79.22 O ATOM 1071 C GLU 140 6.068 68.599 9.973 1.00 79.22 C ATOM 1072 O GLU 140 5.143 67.985 10.503 1.00 79.22 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 93.13 36.4 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 95.74 32.3 62 100.0 62 ARMSMC BURIED . . . . . . . . 86.59 46.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.15 35.9 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 95.98 33.3 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 94.72 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 92.99 38.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.14 43.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 80.13 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 89.71 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 77.35 57.1 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.81 23.1 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 86.32 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 72.95 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 115.87 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.56 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 87.56 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 89.38 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 83.79 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.49 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.49 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.2109 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 9.47 32 100.0 32 CRMSCA BURIED . . . . . . . . 9.54 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.59 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.51 156 100.0 156 CRMSMC BURIED . . . . . . . . 9.77 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.43 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 10.38 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 10.42 112 100.0 112 CRMSSC BURIED . . . . . . . . 10.45 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.97 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 9.90 240 100.0 240 CRMSALL BURIED . . . . . . . . 10.12 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 70.311 0.800 0.820 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 70.379 0.802 0.821 32 100.0 32 ERRCA BURIED . . . . . . . . 70.145 0.796 0.816 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 70.203 0.798 0.818 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 70.318 0.800 0.820 156 100.0 156 ERRMC BURIED . . . . . . . . 69.927 0.792 0.813 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 69.482 0.784 0.807 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 69.556 0.786 0.809 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 69.534 0.785 0.808 112 100.0 112 ERRSC BURIED . . . . . . . . 69.373 0.782 0.805 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 69.878 0.792 0.813 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 69.980 0.794 0.815 240 100.0 240 ERRALL BURIED . . . . . . . . 69.644 0.787 0.809 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 4 31 45 45 DISTCA CA (P) 0.00 0.00 2.22 8.89 68.89 45 DISTCA CA (RMS) 0.00 0.00 2.59 4.06 7.42 DISTCA ALL (N) 0 0 5 33 207 345 345 DISTALL ALL (P) 0.00 0.00 1.45 9.57 60.00 345 DISTALL ALL (RMS) 0.00 0.00 2.69 4.02 7.31 DISTALL END of the results output