####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS307_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS307_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 96 - 115 4.90 15.47 LONGEST_CONTINUOUS_SEGMENT: 20 97 - 116 4.87 15.36 LONGEST_CONTINUOUS_SEGMENT: 20 98 - 117 4.91 15.17 LCS_AVERAGE: 42.72 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 120 - 127 1.93 23.26 LCS_AVERAGE: 13.48 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 122 - 127 0.62 25.43 LCS_AVERAGE: 10.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 20 0 3 3 3 3 4 7 9 9 11 14 16 19 19 19 20 22 30 31 35 LCS_GDT A 97 A 97 4 4 20 3 4 4 4 4 5 7 9 10 11 14 16 19 19 22 25 28 31 33 35 LCS_GDT R 98 R 98 4 5 20 3 4 4 4 5 7 9 11 13 15 17 17 19 21 22 26 28 31 33 35 LCS_GDT G 99 G 99 4 5 20 3 4 4 4 5 6 8 11 13 15 17 17 19 19 22 25 28 30 33 35 LCS_GDT W 100 W 100 4 5 20 3 4 4 4 5 5 5 7 10 12 13 16 18 19 22 25 28 31 33 35 LCS_GDT E 101 E 101 4 5 20 3 4 4 4 5 5 7 11 13 15 17 17 19 19 22 25 28 31 33 35 LCS_GDT C 102 C 102 4 5 20 3 4 4 4 5 6 8 11 13 15 17 17 19 19 19 21 23 30 32 35 LCS_GDT T 103 T 103 5 5 20 3 3 5 6 6 7 8 11 13 15 17 17 19 21 23 26 28 31 33 35 LCS_GDT K 104 K 104 5 5 20 3 4 5 6 6 7 8 10 11 15 17 17 22 24 26 27 29 31 33 35 LCS_GDT D 105 D 105 5 6 20 3 4 5 6 6 7 9 11 11 15 17 20 22 24 26 27 29 31 33 35 LCS_GDT R 106 R 106 5 6 20 3 4 5 6 6 7 7 9 10 11 13 16 19 19 26 27 29 29 32 35 LCS_GDT C 107 C 107 5 6 20 3 4 5 6 6 7 9 11 13 15 17 20 21 24 26 27 29 31 32 35 LCS_GDT G 108 G 108 4 6 20 3 4 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 32 35 LCS_GDT E 109 E 109 4 6 20 4 5 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 31 34 LCS_GDT V 110 V 110 4 7 20 3 4 4 5 7 8 9 11 16 16 17 17 20 20 22 26 29 31 31 32 LCS_GDT R 111 R 111 3 7 20 4 5 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT N 112 N 112 5 7 20 4 5 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT E 113 E 113 5 7 20 3 5 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT E 114 E 114 5 7 20 3 5 5 5 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT N 115 N 115 5 7 20 3 5 5 5 7 8 9 11 13 15 18 20 22 24 26 27 29 31 33 35 LCS_GDT A 116 A 116 5 7 20 3 5 5 5 7 8 9 11 12 15 17 17 21 24 26 27 29 31 33 35 LCS_GDT C 117 C 117 4 6 20 3 3 4 6 7 8 9 11 12 13 14 16 22 24 26 27 29 31 33 35 LCS_GDT H 118 H 118 4 6 16 3 4 4 6 6 7 9 11 12 13 14 16 18 21 24 27 29 31 33 35 LCS_GDT C 119 C 119 5 6 16 3 4 5 6 7 8 9 11 12 13 14 14 16 16 17 20 20 22 24 26 LCS_GDT S 120 S 120 5 8 16 3 4 5 6 7 8 9 11 12 13 14 15 17 18 20 22 23 25 28 28 LCS_GDT E 121 E 121 5 8 16 3 4 5 6 7 8 9 11 12 13 14 15 17 18 20 22 25 26 28 29 LCS_GDT D 122 D 122 6 8 19 4 6 6 6 7 8 9 11 12 13 14 16 18 21 23 25 27 31 33 35 LCS_GDT C 123 C 123 6 8 19 4 6 6 6 7 8 9 11 12 13 15 17 18 21 24 27 29 31 33 35 LCS_GDT L 124 L 124 6 8 19 4 6 6 6 7 7 9 11 12 14 16 17 18 21 24 27 29 31 33 35 LCS_GDT S 125 S 125 6 8 19 4 6 6 6 7 8 9 11 12 14 16 17 22 24 26 27 29 31 33 35 LCS_GDT R 126 R 126 6 8 19 3 6 6 6 7 8 9 11 12 14 17 20 22 24 26 27 29 31 33 35 LCS_GDT G 127 G 127 6 8 19 3 6 6 6 7 8 9 11 12 14 17 20 22 24 26 27 29 31 33 35 LCS_GDT D 128 D 128 3 5 19 3 3 4 4 6 6 10 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT C 129 C 129 3 5 19 3 3 4 5 5 6 10 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT C 130 C 130 5 5 19 3 3 4 6 6 6 10 15 16 16 18 18 20 20 26 26 29 31 31 33 LCS_GDT T 131 T 131 5 5 19 4 4 4 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT N 132 N 132 5 5 19 4 4 4 6 6 6 8 9 12 14 18 18 20 22 26 27 29 31 33 35 LCS_GDT Y 133 Y 133 5 5 19 4 4 4 6 6 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT Q 134 Q 134 5 6 19 4 4 4 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT V 135 V 135 5 6 19 4 5 5 5 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT V 136 V 136 5 6 19 3 5 5 5 5 5 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT C 137 C 137 5 6 19 4 5 5 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 LCS_GDT K 138 K 138 5 6 19 4 5 5 6 6 7 8 10 12 14 18 20 22 24 26 27 29 31 33 35 LCS_GDT G 139 G 139 5 6 19 3 5 5 6 6 7 8 10 12 14 16 17 22 24 26 27 29 31 33 35 LCS_GDT E 140 E 140 3 4 19 3 3 3 6 6 6 8 9 12 14 16 17 18 18 19 22 25 28 32 35 LCS_AVERAGE LCS_A: 22.19 ( 10.37 13.48 42.72 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 6 7 9 12 15 16 16 18 20 22 24 26 27 29 31 33 35 GDT PERCENT_AT 8.89 13.33 13.33 13.33 15.56 20.00 26.67 33.33 35.56 35.56 40.00 44.44 48.89 53.33 57.78 60.00 64.44 68.89 73.33 77.78 GDT RMS_LOCAL 0.19 0.62 0.62 0.62 1.30 1.98 2.43 2.85 3.00 3.00 3.75 4.40 4.96 5.05 5.30 5.47 6.06 6.21 6.88 7.10 GDT RMS_ALL_AT 25.84 25.43 25.43 25.43 25.43 13.17 12.85 12.60 12.83 12.83 12.40 10.87 10.34 10.24 10.45 10.09 9.93 10.13 8.81 8.82 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: D 122 D 122 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 25.203 0 0.735 1.357 29.650 0.000 0.000 LGA A 97 A 97 21.727 0 0.568 0.529 22.647 0.000 0.000 LGA R 98 R 98 18.931 0 0.623 1.022 19.901 0.000 0.000 LGA G 99 G 99 20.340 0 0.433 0.433 20.340 0.000 0.000 LGA W 100 W 100 18.317 0 0.374 0.899 20.663 0.000 0.000 LGA E 101 E 101 20.269 0 0.602 0.955 29.074 0.000 0.000 LGA C 102 C 102 19.236 0 0.169 0.248 20.592 0.000 0.000 LGA T 103 T 103 16.633 0 0.306 0.317 20.654 0.000 0.000 LGA K 104 K 104 11.827 0 0.178 0.748 15.526 0.714 0.317 LGA D 105 D 105 10.752 0 0.748 1.306 16.125 0.476 0.238 LGA R 106 R 106 10.910 0 0.547 1.585 22.140 1.429 0.519 LGA C 107 C 107 6.190 0 0.650 1.070 7.990 35.119 30.556 LGA G 108 G 108 2.002 0 0.699 0.699 4.128 56.190 56.190 LGA E 109 E 109 1.112 0 0.183 0.679 6.865 75.119 50.317 LGA V 110 V 110 4.994 0 0.386 0.924 9.701 53.333 32.993 LGA R 111 R 111 1.811 0 0.561 1.136 10.800 67.143 34.113 LGA N 112 N 112 1.252 0 0.506 0.947 2.886 81.429 77.321 LGA E 113 E 113 2.942 0 0.146 0.485 8.815 69.286 38.148 LGA E 114 E 114 3.496 0 0.085 1.246 10.330 38.571 21.481 LGA N 115 N 115 7.851 0 0.567 1.100 10.480 9.167 5.536 LGA A 116 A 116 10.603 0 0.248 0.259 12.574 0.357 0.286 LGA C 117 C 117 10.371 0 0.338 1.035 11.334 0.119 0.079 LGA H 118 H 118 11.369 0 0.625 1.474 15.460 0.000 0.000 LGA C 119 C 119 17.911 0 0.382 0.414 21.187 0.000 0.000 LGA S 120 S 120 19.267 0 0.106 0.641 19.481 0.000 0.000 LGA E 121 E 121 22.371 0 0.253 0.800 26.956 0.000 0.000 LGA D 122 D 122 20.457 0 0.205 0.848 21.875 0.000 0.000 LGA C 123 C 123 15.934 0 0.070 0.103 17.958 0.000 0.000 LGA L 124 L 124 15.811 0 0.073 0.667 18.909 0.000 0.000 LGA S 125 S 125 13.845 0 0.727 0.641 14.885 0.000 0.000 LGA R 126 R 126 10.522 0 0.208 1.472 20.445 0.833 0.303 LGA G 127 G 127 9.976 0 0.322 0.322 10.504 5.119 5.119 LGA D 128 D 128 3.566 0 0.406 0.696 6.025 51.548 46.250 LGA C 129 C 129 3.782 0 0.616 1.046 6.475 54.048 42.460 LGA C 130 C 130 4.089 0 0.153 0.224 9.018 40.714 30.238 LGA T 131 T 131 3.032 0 0.072 1.189 6.397 47.500 39.388 LGA N 132 N 132 6.658 0 0.218 0.846 11.679 22.024 11.488 LGA Y 133 Y 133 2.949 0 0.581 1.252 9.221 57.619 32.540 LGA Q 134 Q 134 2.951 0 0.265 0.651 7.740 52.857 34.444 LGA V 135 V 135 1.710 0 0.522 1.366 4.769 75.238 62.925 LGA V 136 V 136 3.171 0 0.584 0.533 6.936 67.262 45.986 LGA C 137 C 137 2.735 0 0.124 0.148 6.989 47.857 38.492 LGA K 138 K 138 7.114 0 0.079 0.436 12.736 11.548 5.820 LGA G 139 G 139 9.060 0 0.095 0.095 12.915 2.857 2.857 LGA E 140 E 140 14.398 0 0.416 1.009 15.695 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.697 8.569 9.609 22.788 16.587 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 15 2.85 30.000 25.290 0.509 LGA_LOCAL RMSD: 2.849 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.600 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.697 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.900222 * X + 0.093231 * Y + 0.425334 * Z + 5.870999 Y_new = 0.332256 * X + -0.778427 * Y + -0.532595 * Z + 59.285477 Z_new = 0.281437 * X + 0.620773 * Y + -0.731734 * Z + -39.704796 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.353573 -0.285291 2.438052 [DEG: 20.2582 -16.3460 139.6901 ] ZXZ: 0.673891 2.391658 0.425649 [DEG: 38.6111 137.0319 24.3879 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS307_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS307_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 15 2.85 25.290 8.70 REMARK ---------------------------------------------------------- MOLECULE T0543TS307_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsn_A ATOM 728 N THR 96 30.942 93.686 1.470 1.00 0.00 N ATOM 729 CA THR 96 29.815 93.981 0.554 1.00 0.00 C ATOM 730 C THR 96 29.367 92.568 0.049 1.00 0.00 C ATOM 731 O THR 96 30.154 91.596 0.131 1.00 0.00 O ATOM 732 CB THR 96 30.231 95.006 -0.562 1.00 0.00 C ATOM 733 OG1 THR 96 31.547 94.737 -1.153 1.00 0.00 O ATOM 734 CG2 THR 96 30.184 96.483 -0.101 1.00 0.00 C ATOM 735 N ALA 97 28.216 92.462 -0.616 1.00 0.00 N ATOM 736 CA ALA 97 27.794 91.119 -1.024 1.00 0.00 C ATOM 737 C ALA 97 27.641 90.101 0.176 1.00 0.00 C ATOM 738 O ALA 97 27.440 88.925 -0.068 1.00 0.00 O ATOM 739 CB ALA 97 28.739 90.696 -2.146 1.00 0.00 C ATOM 740 N ARG 98 27.031 90.655 1.223 1.00 0.00 N ATOM 741 CA ARG 98 26.654 90.005 2.415 1.00 0.00 C ATOM 742 C ARG 98 25.702 88.861 1.960 1.00 0.00 C ATOM 743 O ARG 98 24.767 89.123 1.179 1.00 0.00 O ATOM 744 CB ARG 98 25.838 91.018 3.266 1.00 0.00 C ATOM 745 CG ARG 98 26.831 91.990 3.999 1.00 0.00 C ATOM 746 CD ARG 98 25.960 92.872 4.868 1.00 0.00 C ATOM 747 NE ARG 98 26.380 94.263 4.865 1.00 0.00 N ATOM 748 CZ ARG 98 25.591 95.328 4.726 1.00 0.00 C ATOM 749 NH1 ARG 98 26.145 96.556 4.737 1.00 0.00 H ATOM 750 NH2 ARG 98 24.264 95.219 4.559 1.00 0.00 H ATOM 751 N GLY 99 25.653 87.724 2.649 1.00 0.00 N ATOM 752 CA GLY 99 24.886 86.582 2.298 1.00 0.00 C ATOM 753 C GLY 99 23.417 86.887 1.908 1.00 0.00 C ATOM 754 O GLY 99 23.089 86.556 0.760 1.00 0.00 O ATOM 755 N TRP 100 22.659 87.611 2.678 1.00 0.00 N ATOM 756 CA TRP 100 21.264 87.799 2.355 1.00 0.00 C ATOM 757 C TRP 100 20.971 88.924 1.289 1.00 0.00 C ATOM 758 O TRP 100 20.490 88.551 0.277 1.00 0.00 O ATOM 759 CB TRP 100 20.615 88.271 3.676 1.00 0.00 C ATOM 760 CG TRP 100 21.438 89.236 4.475 1.00 0.00 C ATOM 761 CD1 TRP 100 21.579 90.604 4.279 1.00 0.00 C ATOM 762 CD2 TRP 100 22.317 88.920 5.500 1.00 0.00 C ATOM 763 NE1 TRP 100 22.547 91.119 5.199 1.00 0.00 N ATOM 764 CE2 TRP 100 22.953 90.127 5.918 1.00 0.00 C ATOM 765 CE3 TRP 100 22.561 87.721 6.123 1.00 0.00 C ATOM 766 CZ2 TRP 100 23.880 90.149 6.967 1.00 0.00 C ATOM 767 CZ3 TRP 100 23.489 87.747 7.149 1.00 0.00 C ATOM 768 CH2 TRP 100 24.141 88.923 7.551 1.00 0.00 H ATOM 769 N GLU 101 21.830 89.960 1.153 1.00 0.00 N ATOM 770 CA GLU 101 21.605 91.150 0.322 1.00 0.00 C ATOM 771 C GLU 101 21.174 90.852 -1.171 1.00 0.00 C ATOM 772 O GLU 101 20.148 91.421 -1.550 1.00 0.00 O ATOM 773 CB GLU 101 22.891 92.002 0.399 1.00 0.00 C ATOM 774 CG GLU 101 23.079 93.137 -0.604 1.00 0.00 C ATOM 775 CD GLU 101 24.044 94.327 -0.246 1.00 0.00 C ATOM 776 OE1 GLU 101 25.286 94.164 -0.338 1.00 0.00 O ATOM 777 OE2 GLU 101 23.554 95.437 0.106 1.00 0.00 O ATOM 778 N CYS 102 22.012 90.218 -2.047 1.00 0.00 N ATOM 779 CA CYS 102 21.556 89.964 -3.452 1.00 0.00 C ATOM 780 C CYS 102 20.794 88.599 -3.564 1.00 0.00 C ATOM 781 O CYS 102 21.464 87.617 -3.382 1.00 0.00 O ATOM 782 CB CYS 102 22.783 89.994 -4.361 1.00 0.00 C ATOM 783 SG CYS 102 23.525 91.603 -4.494 1.00 0.00 S ATOM 784 N THR 103 19.678 88.706 -2.905 1.00 0.00 N ATOM 785 CA THR 103 18.567 87.802 -2.751 1.00 0.00 C ATOM 786 C THR 103 17.982 88.430 -1.486 1.00 0.00 C ATOM 787 O THR 103 18.362 87.840 -0.505 1.00 0.00 O ATOM 788 CB THR 103 18.968 86.279 -2.777 1.00 0.00 C ATOM 789 OG1 THR 103 20.038 85.954 -1.889 1.00 0.00 O ATOM 790 CG2 THR 103 19.458 85.984 -4.263 1.00 0.00 C ATOM 791 N LYS 104 16.787 88.866 -1.414 1.00 0.00 N ATOM 792 CA LYS 104 16.411 89.661 -0.200 1.00 0.00 C ATOM 793 C LYS 104 16.664 91.202 -0.320 1.00 0.00 C ATOM 794 O LYS 104 16.260 92.010 0.546 1.00 0.00 O ATOM 795 CB LYS 104 16.994 89.258 1.193 1.00 0.00 C ATOM 796 CG LYS 104 18.190 90.232 1.561 1.00 0.00 C ATOM 797 CD LYS 104 18.580 90.135 3.109 1.00 0.00 C ATOM 798 CE LYS 104 18.502 91.517 3.755 1.00 0.00 C ATOM 799 NZ LYS 104 17.167 91.799 4.415 1.00 0.00 N ATOM 800 N ASP 105 16.663 91.502 -1.556 1.00 0.00 N ATOM 801 CA ASP 105 16.712 92.739 -2.216 1.00 0.00 C ATOM 802 C ASP 105 15.447 92.634 -3.172 1.00 0.00 C ATOM 803 O ASP 105 15.214 91.502 -3.714 1.00 0.00 O ATOM 804 CB ASP 105 18.067 92.959 -2.918 1.00 0.00 C ATOM 805 CG ASP 105 18.117 94.184 -3.788 1.00 0.00 C ATOM 806 OD1 ASP 105 18.793 95.164 -3.370 1.00 0.00 O ATOM 807 OD2 ASP 105 17.600 94.140 -4.867 1.00 0.00 O ATOM 808 N ARG 106 14.986 93.699 -3.802 1.00 0.00 N ATOM 809 CA ARG 106 13.734 93.537 -4.584 1.00 0.00 C ATOM 810 C ARG 106 12.637 93.158 -3.531 1.00 0.00 C ATOM 811 O ARG 106 12.323 94.054 -2.728 1.00 0.00 O ATOM 812 CB ARG 106 13.856 92.587 -5.824 1.00 0.00 C ATOM 813 CG ARG 106 12.818 92.881 -6.905 1.00 0.00 C ATOM 814 CD ARG 106 13.052 94.240 -7.635 1.00 0.00 C ATOM 815 NE ARG 106 14.074 94.119 -8.675 1.00 0.00 N ATOM 816 CZ ARG 106 15.361 94.422 -8.539 1.00 0.00 C ATOM 817 NH1 ARG 106 16.238 94.176 -9.508 1.00 0.00 H ATOM 818 NH2 ARG 106 15.815 94.886 -7.383 1.00 0.00 H ATOM 819 N CYS 107 11.769 92.161 -3.750 1.00 0.00 N ATOM 820 CA CYS 107 10.812 91.761 -2.670 1.00 0.00 C ATOM 821 C CYS 107 11.477 90.854 -1.570 1.00 0.00 C ATOM 822 O CYS 107 11.166 91.102 -0.417 1.00 0.00 O ATOM 823 CB CYS 107 9.563 91.028 -3.231 1.00 0.00 C ATOM 824 SG CYS 107 8.359 90.330 -2.004 1.00 0.00 S ATOM 825 N GLY 108 12.574 90.112 -1.876 1.00 0.00 N ATOM 826 CA GLY 108 13.119 89.206 -0.882 1.00 0.00 C ATOM 827 C GLY 108 13.778 90.011 0.263 1.00 0.00 C ATOM 828 O GLY 108 13.782 91.255 0.269 1.00 0.00 O ATOM 829 N GLU 109 13.883 89.289 1.388 1.00 0.00 N ATOM 830 CA GLU 109 14.466 89.839 2.602 1.00 0.00 C ATOM 831 C GLU 109 14.748 88.655 3.618 1.00 0.00 C ATOM 832 O GLU 109 14.946 87.516 3.218 1.00 0.00 O ATOM 833 CB GLU 109 13.542 90.983 3.148 1.00 0.00 C ATOM 834 CG GLU 109 14.164 91.498 4.486 1.00 0.00 C ATOM 835 CD GLU 109 13.549 92.866 4.702 1.00 0.00 C ATOM 836 OE1 GLU 109 13.557 93.766 3.871 1.00 0.00 O ATOM 837 OE2 GLU 109 12.986 92.923 5.850 1.00 0.00 O ATOM 838 N VAL 110 14.973 88.999 4.898 1.00 0.00 N ATOM 839 CA VAL 110 15.294 88.213 6.018 1.00 0.00 C ATOM 840 C VAL 110 16.560 87.538 5.607 1.00 0.00 C ATOM 841 O VAL 110 17.549 88.299 5.499 1.00 0.00 O ATOM 842 CB VAL 110 14.224 87.273 6.563 1.00 0.00 C ATOM 843 CG1 VAL 110 14.870 86.197 7.478 1.00 0.00 C ATOM 844 CG2 VAL 110 13.070 87.896 7.248 1.00 0.00 C ATOM 845 N ARG 111 16.603 86.237 5.465 1.00 0.00 N ATOM 846 CA ARG 111 17.790 85.592 5.093 1.00 0.00 C ATOM 847 C ARG 111 18.963 86.064 6.043 1.00 0.00 C ATOM 848 O ARG 111 20.096 85.711 5.727 1.00 0.00 O ATOM 849 CB ARG 111 18.094 86.148 3.705 1.00 0.00 C ATOM 850 CG ARG 111 17.083 86.012 2.630 1.00 0.00 C ATOM 851 CD ARG 111 17.406 85.911 1.124 1.00 0.00 C ATOM 852 NE ARG 111 16.634 84.790 0.559 1.00 0.00 N ATOM 853 CZ ARG 111 15.421 84.777 -0.055 1.00 0.00 C ATOM 854 NH1 ARG 111 14.728 85.857 -0.483 1.00 0.00 H ATOM 855 NH2 ARG 111 14.927 83.572 -0.342 1.00 0.00 H ATOM 856 N ASN 112 18.718 86.424 7.310 1.00 0.00 N ATOM 857 CA ASN 112 19.701 86.938 8.284 1.00 0.00 C ATOM 858 C ASN 112 19.819 86.004 9.558 1.00 0.00 C ATOM 859 O ASN 112 20.275 86.469 10.609 1.00 0.00 O ATOM 860 CB ASN 112 19.264 88.363 8.666 1.00 0.00 C ATOM 861 CG ASN 112 20.279 89.094 9.551 1.00 0.00 C ATOM 862 OD1 ASN 112 21.477 88.723 9.639 1.00 0.00 O ATOM 863 ND2 ASN 112 19.818 90.191 10.107 1.00 0.00 N ATOM 864 N GLU 113 19.388 84.727 9.468 1.00 0.00 N ATOM 865 CA GLU 113 19.365 83.743 10.524 1.00 0.00 C ATOM 866 C GLU 113 20.654 83.644 11.333 1.00 0.00 C ATOM 867 O GLU 113 20.510 83.644 12.574 1.00 0.00 O ATOM 868 CB GLU 113 18.845 82.433 9.991 1.00 0.00 C ATOM 869 CG GLU 113 17.366 82.278 9.779 1.00 0.00 C ATOM 870 CD GLU 113 16.761 82.555 11.122 1.00 0.00 C ATOM 871 OE1 GLU 113 15.931 83.380 11.228 1.00 0.00 O ATOM 872 OE2 GLU 113 17.200 81.852 12.147 1.00 0.00 O ATOM 873 N GLU 114 21.824 83.797 10.824 1.00 0.00 N ATOM 874 CA GLU 114 23.014 83.584 11.669 1.00 0.00 C ATOM 875 C GLU 114 24.100 84.672 11.551 1.00 0.00 C ATOM 876 O GLU 114 25.166 84.436 12.146 1.00 0.00 O ATOM 877 CB GLU 114 23.572 82.341 11.024 1.00 0.00 C ATOM 878 CG GLU 114 24.356 82.084 9.796 1.00 0.00 C ATOM 879 CD GLU 114 25.361 80.952 9.617 1.00 0.00 C ATOM 880 OE1 GLU 114 26.416 81.114 9.023 1.00 0.00 O ATOM 881 OE2 GLU 114 24.945 79.759 10.001 1.00 0.00 O ATOM 882 N ASN 115 23.916 85.728 10.823 1.00 0.00 N ATOM 883 CA ASN 115 25.047 86.626 10.733 1.00 0.00 C ATOM 884 C ASN 115 25.485 86.924 12.145 1.00 0.00 C ATOM 885 O ASN 115 26.683 86.715 12.420 1.00 0.00 O ATOM 886 CB ASN 115 24.785 87.874 9.977 1.00 0.00 C ATOM 887 CG ASN 115 25.874 88.936 9.951 1.00 0.00 C ATOM 888 OD1 ASN 115 27.041 88.662 10.163 1.00 0.00 O ATOM 889 ND2 ASN 115 25.621 90.200 9.675 1.00 0.00 N ATOM 890 N ALA 116 24.620 87.559 12.938 1.00 0.00 N ATOM 891 CA ALA 116 25.019 87.809 14.274 1.00 0.00 C ATOM 892 C ALA 116 23.931 87.569 15.333 1.00 0.00 C ATOM 893 O ALA 116 24.282 87.762 16.513 1.00 0.00 O ATOM 894 CB ALA 116 25.454 89.277 14.304 1.00 0.00 C ATOM 895 N CYS 117 22.723 87.063 15.002 1.00 0.00 N ATOM 896 CA CYS 117 21.827 86.791 16.063 1.00 0.00 C ATOM 897 C CYS 117 22.231 85.386 16.619 1.00 0.00 C ATOM 898 O CYS 117 23.180 85.354 17.411 1.00 0.00 O ATOM 899 CB CYS 117 20.364 86.931 15.648 1.00 0.00 C ATOM 900 SG CYS 117 19.902 88.597 15.291 1.00 0.00 S ATOM 901 N HIS 118 21.851 84.314 15.897 1.00 0.00 N ATOM 902 CA HIS 118 22.196 82.912 16.160 1.00 0.00 C ATOM 903 C HIS 118 22.529 82.585 17.648 1.00 0.00 C ATOM 904 O HIS 118 23.228 81.580 17.857 1.00 0.00 O ATOM 905 CB HIS 118 23.405 82.460 15.340 1.00 0.00 C ATOM 906 CG HIS 118 24.620 83.349 15.716 1.00 0.00 C ATOM 907 ND1 HIS 118 24.990 84.482 14.970 1.00 0.00 N ATOM 908 CD2 HIS 118 25.461 83.288 16.778 1.00 0.00 C ATOM 909 CE1 HIS 118 26.008 85.064 15.611 1.00 0.00 C ATOM 910 NE2 HIS 118 26.324 84.364 16.685 1.00 0.00 N ATOM 911 N CYS 119 21.828 83.098 18.640 1.00 0.00 N ATOM 912 CA CYS 119 22.221 82.747 19.992 1.00 0.00 C ATOM 913 C CYS 119 21.793 81.321 20.415 1.00 0.00 C ATOM 914 O CYS 119 22.690 80.619 20.906 1.00 0.00 O ATOM 915 CB CYS 119 21.606 83.786 20.943 1.00 0.00 C ATOM 916 SG CYS 119 22.336 85.431 20.749 1.00 0.00 S ATOM 917 N SER 120 20.604 80.833 20.098 1.00 0.00 N ATOM 918 CA SER 120 20.246 79.506 20.641 1.00 0.00 C ATOM 919 C SER 120 20.336 78.249 19.688 1.00 0.00 C ATOM 920 O SER 120 20.595 78.352 18.486 1.00 0.00 O ATOM 921 CB SER 120 18.875 79.456 21.281 1.00 0.00 C ATOM 922 OG SER 120 18.480 80.506 22.099 1.00 0.00 O ATOM 923 N GLU 121 20.842 77.227 20.371 1.00 0.00 N ATOM 924 CA GLU 121 20.955 75.855 19.898 1.00 0.00 C ATOM 925 C GLU 121 19.600 75.158 19.606 1.00 0.00 C ATOM 926 O GLU 121 19.353 74.800 18.460 1.00 0.00 O ATOM 927 CB GLU 121 21.842 75.084 20.941 1.00 0.00 C ATOM 928 CG GLU 121 22.140 73.628 20.757 1.00 0.00 C ATOM 929 CD GLU 121 22.882 73.265 19.600 1.00 0.00 C ATOM 930 OE1 GLU 121 23.308 72.105 19.352 1.00 0.00 O ATOM 931 OE2 GLU 121 23.109 74.299 18.796 1.00 0.00 O ATOM 932 N ASP 122 18.750 74.966 20.646 1.00 0.00 N ATOM 933 CA ASP 122 17.418 74.422 20.548 1.00 0.00 C ATOM 934 C ASP 122 16.426 75.431 19.899 1.00 0.00 C ATOM 935 O ASP 122 15.557 74.932 19.156 1.00 0.00 O ATOM 936 CB ASP 122 16.926 73.983 21.948 1.00 0.00 C ATOM 937 CG ASP 122 15.448 73.616 21.987 1.00 0.00 C ATOM 938 OD1 ASP 122 14.985 72.698 21.207 1.00 0.00 O ATOM 939 OD2 ASP 122 14.655 74.239 22.792 1.00 0.00 O ATOM 940 N CYS 123 16.347 76.713 20.328 1.00 0.00 N ATOM 941 CA CYS 123 15.350 77.580 19.760 1.00 0.00 C ATOM 942 C CYS 123 15.844 78.401 18.510 1.00 0.00 C ATOM 943 O CYS 123 14.979 78.784 17.744 1.00 0.00 O ATOM 944 CB CYS 123 14.599 78.420 20.828 1.00 0.00 C ATOM 945 SG CYS 123 15.409 79.757 21.671 1.00 0.00 S ATOM 946 N LEU 124 17.102 78.927 18.454 1.00 0.00 N ATOM 947 CA LEU 124 17.489 79.598 17.215 1.00 0.00 C ATOM 948 C LEU 124 17.249 78.586 16.075 1.00 0.00 C ATOM 949 O LEU 124 16.561 78.996 15.127 1.00 0.00 O ATOM 950 CB LEU 124 18.917 79.985 17.157 1.00 0.00 C ATOM 951 CG LEU 124 19.328 81.330 16.643 1.00 0.00 C ATOM 952 CD1 LEU 124 20.290 81.070 15.524 1.00 0.00 C ATOM 953 CD2 LEU 124 18.150 82.116 16.143 1.00 0.00 C ATOM 954 N SER 125 17.977 77.458 15.995 1.00 0.00 N ATOM 955 CA SER 125 17.576 76.460 15.044 1.00 0.00 C ATOM 956 C SER 125 16.126 76.097 15.583 1.00 0.00 C ATOM 957 O SER 125 16.045 75.913 16.797 1.00 0.00 O ATOM 958 CB SER 125 18.582 75.373 15.098 1.00 0.00 C ATOM 959 OG SER 125 18.598 74.291 15.922 1.00 0.00 O ATOM 960 N ARG 126 15.242 75.549 14.821 1.00 0.00 N ATOM 961 CA ARG 126 13.825 75.388 15.255 1.00 0.00 C ATOM 962 C ARG 126 13.072 76.743 14.961 1.00 0.00 C ATOM 963 O ARG 126 11.985 76.633 14.381 1.00 0.00 O ATOM 964 CB ARG 126 13.649 74.840 16.682 1.00 0.00 C ATOM 965 CG ARG 126 13.925 73.379 16.791 1.00 0.00 C ATOM 966 CD ARG 126 13.513 72.908 18.142 1.00 0.00 C ATOM 967 NE ARG 126 12.225 73.334 18.656 1.00 0.00 N ATOM 968 CZ ARG 126 12.142 74.427 19.522 1.00 0.00 C ATOM 969 NH1 ARG 126 13.056 75.368 19.715 1.00 0.00 H ATOM 970 NH2 ARG 126 11.223 74.535 20.479 1.00 0.00 H ATOM 971 N GLY 127 13.585 77.917 15.327 1.00 0.00 N ATOM 972 CA GLY 127 12.981 79.205 14.987 1.00 0.00 C ATOM 973 C GLY 127 13.043 79.530 13.456 1.00 0.00 C ATOM 974 O GLY 127 12.176 80.278 12.991 1.00 0.00 O ATOM 975 N ASP 128 14.127 79.165 12.721 1.00 0.00 N ATOM 976 CA ASP 128 14.292 79.350 11.291 1.00 0.00 C ATOM 977 C ASP 128 13.358 78.444 10.396 1.00 0.00 C ATOM 978 O ASP 128 12.583 79.040 9.642 1.00 0.00 O ATOM 979 CB ASP 128 15.786 79.166 11.037 1.00 0.00 C ATOM 980 CG ASP 128 16.515 78.092 11.796 1.00 0.00 C ATOM 981 OD1 ASP 128 16.023 76.971 11.941 1.00 0.00 O ATOM 982 OD2 ASP 128 17.592 78.422 12.299 1.00 0.00 O ATOM 983 N CYS 129 13.367 77.087 10.519 1.00 0.00 N ATOM 984 CA CYS 129 12.482 76.185 9.725 1.00 0.00 C ATOM 985 C CYS 129 10.994 76.509 9.977 1.00 0.00 C ATOM 986 O CYS 129 10.272 76.563 8.974 1.00 0.00 O ATOM 987 CB CYS 129 12.905 74.769 10.128 1.00 0.00 C ATOM 988 SG CYS 129 11.705 73.600 9.408 1.00 0.00 S ATOM 989 N CYS 130 10.454 76.343 11.191 1.00 0.00 N ATOM 990 CA CYS 130 9.112 76.765 11.365 1.00 0.00 C ATOM 991 C CYS 130 9.248 78.279 11.224 1.00 0.00 C ATOM 992 O CYS 130 9.957 78.836 12.087 1.00 0.00 O ATOM 993 CB CYS 130 8.488 76.331 12.691 1.00 0.00 C ATOM 994 SG CYS 130 8.766 74.646 13.236 1.00 0.00 S ATOM 995 N THR 131 8.371 78.977 10.554 1.00 0.00 N ATOM 996 CA THR 131 8.439 80.434 10.265 1.00 0.00 C ATOM 997 C THR 131 9.218 80.801 8.935 1.00 0.00 C ATOM 998 O THR 131 9.146 81.953 8.442 1.00 0.00 O ATOM 999 CB THR 131 9.006 81.225 11.497 1.00 0.00 C ATOM 1000 OG1 THR 131 8.216 81.031 12.700 1.00 0.00 O ATOM 1001 CG2 THR 131 9.332 82.708 11.134 1.00 0.00 C ATOM 1002 N ASN 132 9.619 79.754 8.197 1.00 0.00 N ATOM 1003 CA ASN 132 10.338 79.770 6.944 1.00 0.00 C ATOM 1004 C ASN 132 9.375 79.956 5.763 1.00 0.00 C ATOM 1005 O ASN 132 9.777 80.619 4.797 1.00 0.00 O ATOM 1006 CB ASN 132 11.076 78.436 6.814 1.00 0.00 C ATOM 1007 CG ASN 132 12.110 78.463 5.693 1.00 0.00 C ATOM 1008 OD1 ASN 132 11.888 78.058 4.558 1.00 0.00 O ATOM 1009 ND2 ASN 132 13.315 78.910 5.987 1.00 0.00 N ATOM 1010 N TYR 133 8.250 79.204 5.751 1.00 0.00 N ATOM 1011 CA TYR 133 7.306 79.399 4.730 1.00 0.00 C ATOM 1012 C TYR 133 6.717 80.845 4.912 1.00 0.00 C ATOM 1013 O TYR 133 5.945 81.117 5.835 1.00 0.00 O ATOM 1014 CB TYR 133 6.219 78.302 4.759 1.00 0.00 C ATOM 1015 CG TYR 133 5.046 78.601 3.852 1.00 0.00 C ATOM 1016 CD1 TYR 133 5.217 78.597 2.465 1.00 0.00 C ATOM 1017 CD2 TYR 133 3.777 78.855 4.366 1.00 0.00 C ATOM 1018 CE1 TYR 133 4.126 78.856 1.632 1.00 0.00 C ATOM 1019 CE2 TYR 133 2.679 79.101 3.534 1.00 0.00 C ATOM 1020 CZ TYR 133 2.857 79.119 2.145 1.00 0.00 C ATOM 1021 OH TYR 133 1.794 79.385 1.301 1.00 0.00 H ATOM 1022 N GLN 134 6.745 81.459 3.785 1.00 0.00 N ATOM 1023 CA GLN 134 6.370 82.872 3.531 1.00 0.00 C ATOM 1024 C GLN 134 5.176 83.471 4.299 1.00 0.00 C ATOM 1025 O GLN 134 5.453 84.059 5.340 1.00 0.00 O ATOM 1026 CB GLN 134 5.953 82.861 2.013 1.00 0.00 C ATOM 1027 CG GLN 134 5.676 84.285 1.503 1.00 0.00 C ATOM 1028 CD GLN 134 5.015 84.263 0.155 1.00 0.00 C ATOM 1029 OE1 GLN 134 3.804 84.419 0.048 1.00 0.00 O ATOM 1030 NE2 GLN 134 5.794 84.029 -0.881 1.00 0.00 N ATOM 1031 N VAL 135 4.042 82.743 4.117 1.00 0.00 N ATOM 1032 CA VAL 135 2.695 83.058 4.604 1.00 0.00 C ATOM 1033 C VAL 135 2.130 84.339 3.888 1.00 0.00 C ATOM 1034 O VAL 135 1.898 85.334 4.575 1.00 0.00 O ATOM 1035 CB VAL 135 2.520 83.100 6.169 1.00 0.00 C ATOM 1036 CG1 VAL 135 3.011 81.682 6.716 1.00 0.00 C ATOM 1037 CG2 VAL 135 3.345 84.108 6.967 1.00 0.00 C ATOM 1038 N VAL 136 2.075 84.386 2.526 1.00 0.00 N ATOM 1039 CA VAL 136 1.522 85.516 1.786 1.00 0.00 C ATOM 1040 C VAL 136 2.314 86.836 2.048 1.00 0.00 C ATOM 1041 O VAL 136 2.050 87.524 3.040 1.00 0.00 O ATOM 1042 CB VAL 136 0.024 85.692 2.025 1.00 0.00 C ATOM 1043 CG1 VAL 136 -0.620 86.852 1.239 1.00 0.00 C ATOM 1044 CG2 VAL 136 -0.738 84.420 1.643 1.00 0.00 C ATOM 1045 N CYS 137 3.422 87.037 1.307 1.00 0.00 N ATOM 1046 CA CYS 137 4.308 88.245 1.357 1.00 0.00 C ATOM 1047 C CYS 137 5.262 88.315 2.595 1.00 0.00 C ATOM 1048 O CYS 137 5.967 89.326 2.708 1.00 0.00 O ATOM 1049 CB CYS 137 3.439 89.519 1.314 1.00 0.00 C ATOM 1050 SG CYS 137 2.753 89.851 -0.315 1.00 0.00 S ATOM 1051 N LYS 138 5.466 87.243 3.343 1.00 0.00 N ATOM 1052 CA LYS 138 6.459 87.100 4.452 1.00 0.00 C ATOM 1053 C LYS 138 7.566 86.009 4.124 1.00 0.00 C ATOM 1054 O LYS 138 8.427 85.727 4.965 1.00 0.00 O ATOM 1055 CB LYS 138 5.752 86.736 5.762 1.00 0.00 C ATOM 1056 CG LYS 138 4.540 87.556 6.029 1.00 0.00 C ATOM 1057 CD LYS 138 4.843 88.766 6.849 1.00 0.00 C ATOM 1058 CE LYS 138 3.549 89.428 7.320 1.00 0.00 C ATOM 1059 NZ LYS 138 3.090 90.397 6.300 1.00 0.00 N ATOM 1060 N GLY 139 7.746 85.814 2.811 1.00 0.00 N ATOM 1061 CA GLY 139 8.510 84.809 2.120 1.00 0.00 C ATOM 1062 C GLY 139 10.019 84.969 1.964 1.00 0.00 C ATOM 1063 O GLY 139 10.539 84.283 1.068 1.00 0.00 O ATOM 1064 N GLU 140 10.670 85.915 2.529 1.00 0.00 N ATOM 1065 CA GLU 140 12.044 86.225 2.399 1.00 0.00 C ATOM 1066 C GLU 140 12.809 84.833 2.457 1.00 0.00 C ATOM 1067 O GLU 140 13.180 84.233 1.436 1.00 0.00 O ATOM 1068 CB GLU 140 12.253 87.020 3.685 1.00 0.00 C ATOM 1069 CG GLU 140 12.130 88.562 3.510 1.00 0.00 C ATOM 1070 CD GLU 140 10.691 88.902 3.786 1.00 0.00 C ATOM 1071 OE1 GLU 140 10.078 87.950 4.441 1.00 0.00 O ATOM 1072 OE2 GLU 140 10.153 89.953 3.451 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 94.61 30.7 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 97.67 27.4 62 100.0 62 ARMSMC BURIED . . . . . . . . 86.88 38.5 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.97 35.9 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 88.20 36.1 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 88.70 34.6 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 89.51 38.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.15 47.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 53.85 61.1 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 58.29 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 83.96 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.92 23.1 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 90.16 25.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 92.47 20.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 102.67 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 123.34 0.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 123.34 0.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 119.02 0.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 131.56 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.70 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.70 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1933 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 8.02 32 100.0 32 CRMSCA BURIED . . . . . . . . 10.17 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.80 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 8.14 156 100.0 156 CRMSMC BURIED . . . . . . . . 10.21 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.66 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 10.73 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 10.09 112 100.0 112 CRMSSC BURIED . . . . . . . . 11.78 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.63 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 9.01 240 100.0 240 CRMSALL BURIED . . . . . . . . 10.90 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.136 1.000 0.500 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 7.537 1.000 0.500 32 100.0 32 ERRCA BURIED . . . . . . . . 9.612 1.000 0.500 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.208 1.000 0.500 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 7.622 1.000 0.500 156 100.0 156 ERRMC BURIED . . . . . . . . 9.616 1.000 0.500 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.119 1.000 0.500 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 10.181 1.000 0.500 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 9.587 1.000 0.500 112 100.0 112 ERRSC BURIED . . . . . . . . 11.245 1.000 0.500 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.009 1.000 0.500 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 8.439 1.000 0.500 240 100.0 240 ERRALL BURIED . . . . . . . . 10.312 1.000 0.500 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 7 33 45 45 DISTCA CA (P) 0.00 0.00 2.22 15.56 73.33 45 DISTCA CA (RMS) 0.00 0.00 2.28 3.88 7.02 DISTCA ALL (N) 1 3 9 41 210 345 345 DISTALL ALL (P) 0.29 0.87 2.61 11.88 60.87 345 DISTALL ALL (RMS) 0.97 1.54 2.39 3.79 7.13 DISTALL END of the results output