####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS304_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS304_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 96 - 104 4.34 72.91 LONGEST_CONTINUOUS_SEGMENT: 9 97 - 105 4.89 71.88 LONGEST_CONTINUOUS_SEGMENT: 9 99 - 107 4.93 68.46 LONGEST_CONTINUOUS_SEGMENT: 9 103 - 111 4.67 60.07 LONGEST_CONTINUOUS_SEGMENT: 9 104 - 112 4.57 58.98 LONGEST_CONTINUOUS_SEGMENT: 9 105 - 113 4.63 57.77 LONGEST_CONTINUOUS_SEGMENT: 9 106 - 114 4.54 57.48 LONGEST_CONTINUOUS_SEGMENT: 9 107 - 115 4.55 55.98 LONGEST_CONTINUOUS_SEGMENT: 9 108 - 116 4.83 53.16 LONGEST_CONTINUOUS_SEGMENT: 9 114 - 122 4.39 42.11 LONGEST_CONTINUOUS_SEGMENT: 9 124 - 132 4.85 60.46 LONGEST_CONTINUOUS_SEGMENT: 9 125 - 133 4.42 62.10 LONGEST_CONTINUOUS_SEGMENT: 9 126 - 134 4.85 62.04 LONGEST_CONTINUOUS_SEGMENT: 9 127 - 135 4.79 62.49 LONGEST_CONTINUOUS_SEGMENT: 9 128 - 136 4.79 63.64 LCS_AVERAGE: 19.60 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 100 - 105 1.58 71.56 LONGEST_CONTINUOUS_SEGMENT: 6 108 - 113 1.82 56.87 LONGEST_CONTINUOUS_SEGMENT: 6 109 - 114 1.96 55.35 LONGEST_CONTINUOUS_SEGMENT: 6 116 - 121 1.42 43.15 LCS_AVERAGE: 11.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.76 71.99 LONGEST_CONTINUOUS_SEGMENT: 5 110 - 114 0.99 54.76 LCS_AVERAGE: 8.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 9 3 3 3 3 3 3 4 4 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT A 97 A 97 3 5 9 3 3 3 4 4 5 5 5 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT R 98 R 98 3 5 9 3 3 3 4 4 5 5 5 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT G 99 G 99 3 5 9 3 3 3 4 4 5 6 6 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT W 100 W 100 5 6 9 3 5 5 5 5 6 6 6 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT E 101 E 101 5 6 9 4 5 5 5 5 6 6 6 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT C 102 C 102 5 6 9 4 5 5 5 5 6 6 6 6 7 9 9 9 9 9 10 10 10 10 10 LCS_GDT T 103 T 103 5 6 9 4 5 5 5 5 6 6 6 6 7 9 9 9 9 9 10 10 10 10 11 LCS_GDT K 104 K 104 5 6 9 4 5 5 5 5 6 6 6 7 7 9 9 9 10 10 10 10 11 11 11 LCS_GDT D 105 D 105 3 6 9 0 3 4 5 5 6 6 6 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT R 106 R 106 3 4 9 0 3 4 4 4 4 5 6 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT C 107 C 107 4 5 9 0 3 4 4 5 5 6 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT G 108 G 108 4 6 9 3 3 4 4 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT E 109 E 109 4 6 9 3 3 4 5 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT V 110 V 110 5 6 9 3 4 5 5 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT R 111 R 111 5 6 9 3 4 5 5 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT N 112 N 112 5 6 9 3 4 5 5 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT E 113 E 113 5 6 9 3 4 5 5 6 6 7 7 7 7 8 8 8 10 10 10 10 11 11 11 LCS_GDT E 114 E 114 5 6 9 3 3 5 5 5 5 7 7 7 8 8 8 8 9 9 9 9 11 11 11 LCS_GDT N 115 N 115 3 4 9 3 3 4 4 4 4 5 6 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT A 116 A 116 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT C 117 C 117 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT H 118 H 118 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT C 119 C 119 4 6 9 3 4 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT S 120 S 120 4 6 9 3 3 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT E 121 E 121 3 6 9 3 3 5 5 6 6 6 7 7 8 8 8 8 9 9 9 10 10 10 11 LCS_GDT D 122 D 122 3 4 9 0 3 3 4 4 4 5 7 7 7 7 8 8 9 9 9 10 10 10 11 LCS_GDT C 123 C 123 3 4 8 0 3 3 4 4 4 4 6 6 6 7 7 7 8 9 9 10 10 10 11 LCS_GDT L 124 L 124 3 4 9 0 3 3 4 4 4 4 6 6 6 7 7 7 8 9 9 10 10 10 11 LCS_GDT S 125 S 125 3 4 9 0 3 3 4 4 5 6 7 7 8 8 8 8 8 8 9 10 10 11 11 LCS_GDT R 126 R 126 3 5 9 0 3 3 5 5 6 7 7 7 8 8 8 8 9 10 10 10 11 11 11 LCS_GDT G 127 G 127 3 5 9 0 3 4 5 5 6 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT D 128 D 128 3 5 9 3 3 4 5 5 6 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT C 129 C 129 3 5 9 3 3 4 5 5 6 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT C 130 C 130 3 5 9 3 3 4 5 5 6 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT T 131 T 131 3 5 9 0 3 3 5 5 6 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT N 132 N 132 3 5 9 0 3 3 5 5 5 7 7 7 8 8 8 9 9 10 10 10 11 11 11 LCS_GDT Y 133 Y 133 3 4 9 0 3 3 4 4 4 5 6 6 6 8 8 9 9 10 10 10 11 11 11 LCS_GDT Q 134 Q 134 3 4 9 0 3 3 4 4 4 5 6 6 6 8 8 9 9 10 10 10 11 11 11 LCS_GDT V 135 V 135 3 3 9 0 3 3 3 3 4 5 6 6 6 8 8 9 9 10 10 10 11 11 11 LCS_GDT V 136 V 136 3 4 9 0 3 3 3 4 4 5 5 6 6 7 7 8 9 9 10 10 11 11 11 LCS_GDT C 137 C 137 3 4 8 3 3 4 4 4 4 5 5 5 6 7 7 8 9 9 9 9 10 11 11 LCS_GDT K 138 K 138 3 4 8 3 3 4 4 4 4 5 5 5 5 5 7 8 9 9 9 9 10 10 10 LCS_GDT G 139 G 139 3 4 7 3 3 4 4 4 4 5 5 5 5 5 7 8 9 9 9 9 10 11 11 LCS_GDT E 140 E 140 3 4 6 3 3 4 4 4 4 5 5 5 5 5 5 5 6 6 8 8 8 10 10 LCS_AVERAGE LCS_A: 12.95 ( 8.05 11.21 19.60 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 5 6 6 7 7 7 8 9 9 9 10 10 10 10 11 11 11 GDT PERCENT_AT 8.89 11.11 11.11 11.11 13.33 13.33 15.56 15.56 15.56 17.78 20.00 20.00 20.00 22.22 22.22 22.22 22.22 24.44 24.44 24.44 GDT RMS_LOCAL 0.38 0.76 0.76 0.76 1.42 1.42 2.40 2.40 2.40 3.24 4.34 4.34 4.34 5.05 5.05 5.05 5.05 5.72 5.72 5.72 GDT RMS_ALL_AT 72.54 71.99 71.99 71.99 43.15 43.15 56.27 56.27 56.27 61.12 72.91 72.91 72.91 58.53 58.53 58.53 58.53 63.32 63.32 63.32 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: D 105 D 105 # possible swapping detected: E 113 E 113 # possible swapping detected: E 121 E 121 # possible swapping detected: D 122 D 122 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 62.232 0 0.710 1.439 63.848 0.000 0.000 LGA A 97 A 97 56.417 0 0.136 0.135 58.460 0.000 0.000 LGA R 98 R 98 49.766 0 0.698 0.594 52.267 0.000 0.000 LGA G 99 G 99 47.475 0 0.186 0.186 48.507 0.000 0.000 LGA W 100 W 100 42.843 0 0.682 1.229 47.381 0.000 0.000 LGA E 101 E 101 36.169 0 0.057 1.251 38.674 0.000 0.000 LGA C 102 C 102 29.522 0 0.000 0.732 31.650 0.000 0.000 LGA T 103 T 103 24.874 0 0.018 1.251 27.937 0.000 0.000 LGA K 104 K 104 17.768 0 0.637 1.017 20.300 0.000 0.370 LGA D 105 D 105 16.432 0 0.700 0.830 20.627 0.000 0.000 LGA R 106 R 106 13.210 0 0.685 0.879 16.386 0.000 0.000 LGA C 107 C 107 7.967 0 0.183 0.839 11.761 12.619 8.889 LGA G 108 G 108 3.265 0 0.667 0.667 4.882 50.833 50.833 LGA E 109 E 109 2.865 0 0.057 1.101 9.528 65.119 34.497 LGA V 110 V 110 2.330 0 0.074 0.084 5.515 61.071 47.007 LGA R 111 R 111 1.415 0 0.122 1.092 3.425 75.119 76.320 LGA N 112 N 112 1.126 0 0.139 1.142 3.221 83.690 77.560 LGA E 113 E 113 1.129 0 0.701 1.229 3.864 67.738 65.079 LGA E 114 E 114 3.374 0 0.690 0.741 5.851 37.500 42.434 LGA N 115 N 115 10.362 0 0.041 1.251 14.958 1.190 0.595 LGA A 116 A 116 13.947 0 0.598 0.597 15.642 0.000 0.000 LGA C 117 C 117 19.984 0 0.056 0.729 23.776 0.000 0.000 LGA H 118 H 118 25.434 0 0.047 1.242 28.234 0.000 0.000 LGA C 119 C 119 32.352 0 0.592 0.893 35.292 0.000 0.000 LGA S 120 S 120 36.066 0 0.063 0.637 38.069 0.000 0.000 LGA E 121 E 121 42.150 0 0.684 1.401 46.225 0.000 0.000 LGA D 122 D 122 43.109 0 0.631 1.149 43.356 0.000 0.000 LGA C 123 C 123 44.769 0 0.658 0.854 47.884 0.000 0.000 LGA L 124 L 124 50.471 0 0.625 0.869 55.457 0.000 0.000 LGA S 125 S 125 52.548 0 0.706 0.814 52.676 0.000 0.000 LGA R 126 R 126 52.840 0 0.712 1.389 54.379 0.000 0.000 LGA G 127 G 127 57.329 0 0.525 0.525 57.532 0.000 0.000 LGA D 128 D 128 58.462 0 0.551 1.114 60.729 0.000 0.000 LGA C 129 C 129 64.464 0 0.070 0.800 67.907 0.000 0.000 LGA C 130 C 130 67.899 0 0.000 0.091 70.857 0.000 0.000 LGA T 131 T 131 73.282 0 0.687 1.407 77.049 0.000 0.000 LGA N 132 N 132 79.411 0 0.651 1.121 82.082 0.000 0.000 LGA Y 133 Y 133 83.188 0 0.589 1.142 89.264 0.000 0.000 LGA Q 134 Q 134 90.080 0 0.657 1.192 93.239 0.000 0.000 LGA V 135 V 135 94.812 0 0.602 0.616 97.172 0.000 0.000 LGA V 136 V 136 97.053 0 0.644 1.465 99.598 0.000 0.000 LGA C 137 C 137 101.321 0 0.711 0.822 104.021 0.000 0.000 LGA K 138 K 138 107.289 0 0.439 1.011 110.953 0.000 0.000 LGA G 139 G 139 111.633 0 0.242 0.242 115.107 0.000 0.000 LGA E 140 E 140 113.719 0 0.124 0.380 114.100 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 40.768 40.788 40.916 10.108 8.969 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 7 2.40 15.000 14.401 0.280 LGA_LOCAL RMSD: 2.397 Number of atoms: 7 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 56.269 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 40.768 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.298365 * X + 0.770719 * Y + -0.563002 * Z + -15.818994 Y_new = 0.662503 * X + -0.591857 * Y + -0.459124 * Z + -276.295929 Z_new = -0.687072 * X + -0.236004 * Y + -0.687193 * Z + 373.568573 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.147643 0.757452 -2.810781 [DEG: 65.7551 43.3988 -161.0459 ] ZXZ: -0.886680 2.328414 -1.901662 [DEG: -50.8030 133.4083 -108.9572 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS304_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS304_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 7 2.40 14.401 40.77 REMARK ---------------------------------------------------------- MOLECULE T0543TS304_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 1g8tA ATOM 728 N THR 96 -11.965 99.270 -35.862 1.00321.64 N ATOM 729 CA THR 96 -11.207 99.743 -34.739 1.00321.64 C ATOM 730 CB THR 96 -12.041 100.434 -33.702 1.00321.64 C ATOM 731 OG1 THR 96 -12.989 99.529 -33.153 1.00321.64 O ATOM 732 CG2 THR 96 -12.761 101.622 -34.362 1.00321.64 C ATOM 733 C THR 96 -10.578 98.558 -34.075 1.00321.64 C ATOM 734 O THR 96 -11.044 97.430 -34.229 1.00321.64 O ATOM 735 N ALA 97 -9.477 98.788 -33.330 1.00292.95 N ATOM 736 CA ALA 97 -8.839 97.710 -32.626 1.00292.95 C ATOM 737 CB ALA 97 -7.754 96.994 -33.448 1.00292.95 C ATOM 738 C ALA 97 -8.165 98.295 -31.424 1.00292.95 C ATOM 739 O ALA 97 -7.781 99.464 -31.425 1.00292.95 O ATOM 740 N ARG 98 -8.023 97.492 -30.349 1.00309.73 N ATOM 741 CA ARG 98 -7.360 97.976 -29.172 1.00309.73 C ATOM 742 CB ARG 98 -8.274 98.797 -28.244 1.00309.73 C ATOM 743 CG ARG 98 -8.742 100.117 -28.862 1.00309.73 C ATOM 744 CD ARG 98 -9.650 100.934 -27.941 1.00309.73 C ATOM 745 NE ARG 98 -8.808 101.449 -26.824 1.00309.73 N ATOM 746 CZ ARG 98 -9.313 102.374 -25.957 1.00309.73 C ATOM 747 NH1 ARG 98 -10.590 102.829 -26.113 1.00309.73 H ATOM 748 NH2 ARG 98 -8.541 102.844 -24.935 1.00309.73 H ATOM 749 C ARG 98 -6.892 96.791 -28.387 1.00309.73 C ATOM 750 O ARG 98 -7.335 95.667 -28.618 1.00309.73 O ATOM 751 N GLY 99 -5.955 97.017 -27.442 1.00137.60 N ATOM 752 CA GLY 99 -5.490 95.944 -26.609 1.00137.60 C ATOM 753 C GLY 99 -4.305 96.435 -25.840 1.00137.60 C ATOM 754 O GLY 99 -3.540 97.267 -26.320 1.00137.60 O ATOM 755 N TRP 100 -4.124 95.917 -24.605 1.00335.28 N ATOM 756 CA TRP 100 -3.000 96.310 -23.805 1.00335.28 C ATOM 757 CB TRP 100 -3.277 97.529 -22.911 1.00335.28 C ATOM 758 CG TRP 100 -2.102 97.951 -22.063 1.00335.28 C ATOM 759 CD2 TRP 100 -1.078 98.860 -22.503 1.00335.28 C ATOM 760 CD1 TRP 100 -1.775 97.589 -20.790 1.00335.28 C ATOM 761 NE1 TRP 100 -0.613 98.214 -20.406 1.00335.28 N ATOM 762 CE2 TRP 100 -0.173 99.001 -21.451 1.00335.28 C ATOM 763 CE3 TRP 100 -0.909 99.521 -23.684 1.00335.28 C ATOM 764 CZ2 TRP 100 0.921 99.809 -21.567 1.00335.28 C ATOM 765 CZ3 TRP 100 0.196 100.336 -23.798 1.00335.28 C ATOM 766 CH2 TRP 100 1.093 100.477 -22.760 1.00335.28 H ATOM 767 C TRP 100 -2.663 95.167 -22.899 1.00335.28 C ATOM 768 O TRP 100 -3.508 94.322 -22.613 1.00335.28 O ATOM 769 N GLU 101 -1.397 95.103 -22.439 1.00286.73 N ATOM 770 CA GLU 101 -1.005 94.058 -21.535 1.00286.73 C ATOM 771 CB GLU 101 -0.354 92.852 -22.232 1.00286.73 C ATOM 772 CG GLU 101 -1.321 92.062 -23.116 1.00286.73 C ATOM 773 CD GLU 101 -2.312 91.351 -22.206 1.00286.73 C ATOM 774 OE1 GLU 101 -2.192 91.511 -20.961 1.00286.73 O ATOM 775 OE2 GLU 101 -3.203 90.639 -22.741 1.00286.73 O ATOM 776 C GLU 101 0.012 94.625 -20.597 1.00286.73 C ATOM 777 O GLU 101 0.780 95.512 -20.964 1.00286.73 O ATOM 778 N CYS 102 0.029 94.136 -19.339 1.00118.34 N ATOM 779 CA CYS 102 0.998 94.611 -18.393 1.00118.34 C ATOM 780 CB CYS 102 0.472 95.732 -17.482 1.00118.34 C ATOM 781 SG CYS 102 1.726 96.312 -16.298 1.00118.34 S ATOM 782 C CYS 102 1.376 93.465 -17.508 1.00118.34 C ATOM 783 O CYS 102 0.584 92.550 -17.292 1.00118.34 O ATOM 784 N THR 103 2.622 93.478 -16.988 1.00281.72 N ATOM 785 CA THR 103 3.050 92.433 -16.103 1.00281.72 C ATOM 786 CB THR 103 3.914 91.402 -16.767 1.00281.72 C ATOM 787 OG1 THR 103 4.144 90.313 -15.886 1.00281.72 O ATOM 788 CG2 THR 103 5.248 92.058 -17.164 1.00281.72 C ATOM 789 C THR 103 3.868 93.056 -15.015 1.00281.72 C ATOM 790 O THR 103 4.422 94.140 -15.188 1.00281.72 O ATOM 791 N LYS 104 3.946 92.387 -13.846 1.00342.03 N ATOM 792 CA LYS 104 4.741 92.903 -12.768 1.00342.03 C ATOM 793 CB LYS 104 3.917 93.653 -11.701 1.00342.03 C ATOM 794 CG LYS 104 2.814 92.824 -11.035 1.00342.03 C ATOM 795 CD LYS 104 3.318 91.760 -10.056 1.00342.03 C ATOM 796 CE LYS 104 3.832 92.337 -8.736 1.00342.03 C ATOM 797 NZ LYS 104 4.297 91.245 -7.853 1.00342.03 N ATOM 798 C LYS 104 5.431 91.751 -12.108 1.00342.03 C ATOM 799 O LYS 104 4.884 90.654 -12.022 1.00342.03 O ATOM 800 N ASP 105 6.679 91.970 -11.642 1.00254.20 N ATOM 801 CA ASP 105 7.402 90.924 -10.977 1.00254.20 C ATOM 802 CB ASP 105 8.543 90.324 -11.818 1.00254.20 C ATOM 803 CG ASP 105 9.567 91.414 -12.103 1.00254.20 C ATOM 804 OD1 ASP 105 9.161 92.602 -12.210 1.00254.20 O ATOM 805 OD2 ASP 105 10.774 91.070 -12.218 1.00254.20 O ATOM 806 C ASP 105 8.012 91.492 -9.732 1.00254.20 C ATOM 807 O ASP 105 8.552 92.598 -9.745 1.00254.20 O ATOM 808 N ARG 106 7.915 90.753 -8.607 1.00283.37 N ATOM 809 CA ARG 106 8.508 91.230 -7.388 1.00283.37 C ATOM 810 CB ARG 106 7.486 91.801 -6.391 1.00283.37 C ATOM 811 CG ARG 106 8.117 92.305 -5.092 1.00283.37 C ATOM 812 CD ARG 106 7.100 92.876 -4.100 1.00283.37 C ATOM 813 NE ARG 106 7.853 93.324 -2.895 1.00283.37 N ATOM 814 CZ ARG 106 7.232 94.085 -1.946 1.00283.37 C ATOM 815 NH1 ARG 106 5.922 94.437 -2.104 1.00283.37 H ATOM 816 NH2 ARG 106 7.919 94.493 -0.841 1.00283.37 H ATOM 817 C ARG 106 9.171 90.065 -6.718 1.00283.37 C ATOM 818 O ARG 106 8.701 88.931 -6.814 1.00283.37 O ATOM 819 N CYS 107 10.307 90.317 -6.035 1.00108.41 N ATOM 820 CA CYS 107 10.984 89.257 -5.342 1.00108.41 C ATOM 821 CB CYS 107 11.924 88.437 -6.240 1.00108.41 C ATOM 822 SG CYS 107 13.286 89.432 -6.917 1.00108.41 S ATOM 823 C CYS 107 11.829 89.874 -4.271 1.00108.41 C ATOM 824 O CYS 107 12.035 91.086 -4.251 1.00108.41 O ATOM 825 N GLY 108 12.325 89.044 -3.329 1.00109.47 N ATOM 826 CA GLY 108 13.187 89.548 -2.297 1.00109.47 C ATOM 827 C GLY 108 13.339 88.484 -1.255 1.00109.47 C ATOM 828 O GLY 108 12.433 87.683 -1.034 1.00109.47 O ATOM 829 N GLU 109 14.510 88.456 -0.582 1.00239.42 N ATOM 830 CA GLU 109 14.737 87.489 0.454 1.00239.42 C ATOM 831 CB GLU 109 15.249 86.136 -0.071 1.00239.42 C ATOM 832 CG GLU 109 14.221 85.383 -0.919 1.00239.42 C ATOM 833 CD GLU 109 14.854 84.075 -1.372 1.00239.42 C ATOM 834 OE1 GLU 109 16.033 83.830 -1.003 1.00239.42 O ATOM 835 OE2 GLU 109 14.164 83.301 -2.089 1.00239.42 O ATOM 836 C GLU 109 15.795 88.036 1.360 1.00239.42 C ATOM 837 O GLU 109 16.621 88.846 0.942 1.00239.42 O ATOM 838 N VAL 110 15.781 87.622 2.644 1.00138.00 N ATOM 839 CA VAL 110 16.787 88.081 3.560 1.00138.00 C ATOM 840 CB VAL 110 16.355 89.257 4.385 1.00138.00 C ATOM 841 CG1 VAL 110 15.169 88.826 5.265 1.00138.00 C ATOM 842 CG2 VAL 110 17.566 89.763 5.185 1.00138.00 C ATOM 843 C VAL 110 17.091 86.967 4.511 1.00138.00 C ATOM 844 O VAL 110 16.253 86.099 4.751 1.00138.00 O ATOM 845 N ARG 111 18.322 86.950 5.061 1.00311.30 N ATOM 846 CA ARG 111 18.682 85.933 6.010 1.00311.30 C ATOM 847 CB ARG 111 19.401 84.729 5.379 1.00311.30 C ATOM 848 CG ARG 111 19.779 83.646 6.391 1.00311.30 C ATOM 849 CD ARG 111 20.495 82.448 5.767 1.00311.30 C ATOM 850 NE ARG 111 20.802 81.487 6.864 1.00311.30 N ATOM 851 CZ ARG 111 19.865 80.569 7.246 1.00311.30 C ATOM 852 NH1 ARG 111 18.651 80.533 6.623 1.00311.30 H ATOM 853 NH2 ARG 111 20.143 79.688 8.252 1.00311.30 H ATOM 854 C ARG 111 19.627 86.541 6.997 1.00311.30 C ATOM 855 O ARG 111 20.353 87.480 6.676 1.00311.30 O ATOM 856 N ASN 112 19.625 86.027 8.246 1.00291.94 N ATOM 857 CA ASN 112 20.528 86.536 9.238 1.00291.94 C ATOM 858 CB ASN 112 19.886 87.567 10.183 1.00291.94 C ATOM 859 CG ASN 112 20.973 88.110 11.099 1.00291.94 C ATOM 860 OD1 ASN 112 21.863 88.838 10.664 1.00291.94 O ATOM 861 ND2 ASN 112 20.899 87.750 12.409 1.00291.94 N ATOM 862 C ASN 112 20.980 85.387 10.085 1.00291.94 C ATOM 863 O ASN 112 20.252 84.410 10.259 1.00291.94 O ATOM 864 N GLU 113 22.218 85.467 10.617 1.00318.81 N ATOM 865 CA GLU 113 22.710 84.422 11.469 1.00318.81 C ATOM 866 CB GLU 113 23.589 83.392 10.740 1.00318.81 C ATOM 867 CG GLU 113 24.109 82.280 11.653 1.00318.81 C ATOM 868 CD GLU 113 24.958 81.336 10.813 1.00318.81 C ATOM 869 OE1 GLU 113 25.085 81.590 9.586 1.00318.81 O ATOM 870 OE2 GLU 113 25.490 80.351 11.389 1.00318.81 O ATOM 871 C GLU 113 23.560 85.055 12.525 1.00318.81 C ATOM 872 O GLU 113 24.191 86.086 12.289 1.00318.81 O ATOM 873 N GLU 114 23.580 84.464 13.737 1.00319.34 N ATOM 874 CA GLU 114 24.397 85.000 14.788 1.00319.34 C ATOM 875 CB GLU 114 23.628 85.917 15.756 1.00319.34 C ATOM 876 CG GLU 114 24.498 86.494 16.874 1.00319.34 C ATOM 877 CD GLU 114 23.616 87.373 17.747 1.00319.34 C ATOM 878 OE1 GLU 114 22.399 87.483 17.438 1.00319.34 O ATOM 879 OE2 GLU 114 24.145 87.948 18.735 1.00319.34 O ATOM 880 C GLU 114 24.924 83.855 15.595 1.00319.34 C ATOM 881 O GLU 114 24.261 82.828 15.737 1.00319.34 O ATOM 882 N ASN 115 26.156 83.995 16.126 1.00309.97 N ATOM 883 CA ASN 115 26.718 82.955 16.940 1.00309.97 C ATOM 884 CB ASN 115 27.670 82.019 16.175 1.00309.97 C ATOM 885 CG ASN 115 28.860 82.841 15.698 1.00309.97 C ATOM 886 OD1 ASN 115 30.003 82.571 16.065 1.00309.97 O ATOM 887 ND2 ASN 115 28.586 83.871 14.853 1.00309.97 N ATOM 888 C ASN 115 27.520 83.606 18.023 1.00309.97 C ATOM 889 O ASN 115 28.025 84.713 17.852 1.00309.97 O ATOM 890 N ALA 116 27.639 82.934 19.189 1.00262.38 N ATOM 891 CA ALA 116 28.424 83.484 20.256 1.00262.38 C ATOM 892 CB ALA 116 27.629 84.412 21.190 1.00262.38 C ATOM 893 C ALA 116 28.923 82.348 21.092 1.00262.38 C ATOM 894 O ALA 116 28.313 81.282 21.133 1.00262.38 O ATOM 895 N CYS 117 30.077 82.544 21.766 1.00128.00 N ATOM 896 CA CYS 117 30.605 81.516 22.617 1.00128.00 C ATOM 897 CB CYS 117 31.550 80.542 21.893 1.00128.00 C ATOM 898 SG CYS 117 32.200 79.253 22.998 1.00128.00 S ATOM 899 C CYS 117 31.401 82.181 23.695 1.00128.00 C ATOM 900 O CYS 117 31.911 83.284 23.510 1.00128.00 O ATOM 901 N HIS 118 31.509 81.527 24.871 1.00271.12 N ATOM 902 CA HIS 118 32.289 82.086 25.939 1.00271.12 C ATOM 903 ND1 HIS 118 33.087 84.722 27.853 1.00271.12 N ATOM 904 CG HIS 118 32.313 83.590 27.978 1.00271.12 C ATOM 905 CB HIS 118 31.486 83.011 26.868 1.00271.12 C ATOM 906 NE2 HIS 118 33.340 84.008 29.944 1.00271.12 N ATOM 907 CD2 HIS 118 32.479 83.167 29.261 1.00271.12 C ATOM 908 CE1 HIS 118 33.679 84.927 29.057 1.00271.12 C ATOM 909 C HIS 118 32.796 80.955 26.775 1.00271.12 C ATOM 910 O HIS 118 32.151 79.913 26.883 1.00271.12 O ATOM 911 N CYS 119 33.993 81.125 27.378 1.00112.40 N ATOM 912 CA CYS 119 34.526 80.096 28.225 1.00112.40 C ATOM 913 CB CYS 119 35.403 79.078 27.480 1.00112.40 C ATOM 914 SG CYS 119 36.063 77.789 28.580 1.00112.40 S ATOM 915 C CYS 119 35.394 80.755 29.252 1.00112.40 C ATOM 916 O CYS 119 35.937 81.833 29.017 1.00112.40 O ATOM 917 N SER 120 35.526 80.126 30.439 1.00213.68 N ATOM 918 CA SER 120 36.374 80.680 31.457 1.00213.68 C ATOM 919 CB SER 120 35.662 81.698 32.364 1.00213.68 C ATOM 920 OG SER 120 35.256 82.829 31.606 1.00213.68 O ATOM 921 C SER 120 36.831 79.556 32.332 1.00213.68 C ATOM 922 O SER 120 36.181 78.515 32.410 1.00213.68 O ATOM 923 N GLU 121 37.989 79.735 33.003 1.00264.97 N ATOM 924 CA GLU 121 38.475 78.719 33.894 1.00264.97 C ATOM 925 CB GLU 121 39.528 77.796 33.257 1.00264.97 C ATOM 926 CG GLU 121 38.969 76.914 32.139 1.00264.97 C ATOM 927 CD GLU 121 40.106 76.055 31.603 1.00264.97 C ATOM 928 OE1 GLU 121 41.243 76.185 32.130 1.00264.97 O ATOM 929 OE2 GLU 121 39.853 75.262 30.657 1.00264.97 O ATOM 930 C GLU 121 39.133 79.407 35.048 1.00264.97 C ATOM 931 O GLU 121 39.766 80.448 34.880 1.00264.97 O ATOM 932 N ASP 122 38.979 78.845 36.265 1.00168.60 N ATOM 933 CA ASP 122 39.593 79.435 37.420 1.00168.60 C ATOM 934 CB ASP 122 38.588 80.066 38.398 1.00168.60 C ATOM 935 CG ASP 122 37.994 81.303 37.740 1.00168.60 C ATOM 936 OD1 ASP 122 38.543 81.741 36.695 1.00168.60 O ATOM 937 OD2 ASP 122 36.978 81.825 38.273 1.00168.60 O ATOM 938 C ASP 122 40.304 78.350 38.169 1.00168.60 C ATOM 939 O ASP 122 39.740 77.283 38.412 1.00168.60 O ATOM 940 N CYS 123 41.579 78.591 38.540 1.00101.66 N ATOM 941 CA CYS 123 42.299 77.608 39.299 1.00101.66 C ATOM 942 CB CYS 123 43.431 76.927 38.509 1.00101.66 C ATOM 943 SG CYS 123 44.321 75.688 39.498 1.00101.66 S ATOM 944 C CYS 123 42.933 78.309 40.458 1.00101.66 C ATOM 945 O CYS 123 43.467 79.410 40.312 1.00101.66 O ATOM 946 N LEU 124 42.868 77.696 41.659 1.00236.61 N ATOM 947 CA LEU 124 43.467 78.307 42.810 1.00236.61 C ATOM 948 CB LEU 124 42.419 78.967 43.734 1.00236.61 C ATOM 949 CG LEU 124 42.945 79.825 44.912 1.00236.61 C ATOM 950 CD1 LEU 124 41.769 80.401 45.716 1.00236.61 C ATOM 951 CD2 LEU 124 43.925 79.074 45.826 1.00236.61 C ATOM 952 C LEU 124 44.160 77.214 43.565 1.00236.61 C ATOM 953 O LEU 124 43.617 76.122 43.729 1.00236.61 O ATOM 954 N SER 125 45.399 77.473 44.029 1.00226.67 N ATOM 955 CA SER 125 46.100 76.487 44.803 1.00226.67 C ATOM 956 CB SER 125 47.158 75.711 44.002 1.00226.67 C ATOM 957 OG SER 125 47.801 74.760 44.837 1.00226.67 O ATOM 958 C SER 125 46.817 77.206 45.900 1.00226.67 C ATOM 959 O SER 125 47.232 78.352 45.736 1.00226.67 O ATOM 960 N ARG 126 46.963 76.551 47.072 1.00329.47 N ATOM 961 CA ARG 126 47.663 77.172 48.159 1.00329.47 C ATOM 962 CB ARG 126 46.780 78.115 48.996 1.00329.47 C ATOM 963 CG ARG 126 47.519 78.785 50.158 1.00329.47 C ATOM 964 CD ARG 126 47.425 78.012 51.476 1.00329.47 C ATOM 965 NE ARG 126 45.999 78.028 51.905 1.00329.47 N ATOM 966 CZ ARG 126 45.532 79.045 52.686 1.00329.47 C ATOM 967 NH1 ARG 126 46.373 80.049 53.072 1.00329.47 H ATOM 968 NH2 ARG 126 44.226 79.059 53.081 1.00329.47 H ATOM 969 C ARG 126 48.148 76.090 49.072 1.00329.47 C ATOM 970 O ARG 126 47.658 74.964 49.029 1.00329.47 O ATOM 971 N GLY 127 49.152 76.408 49.915 1.00130.64 N ATOM 972 CA GLY 127 49.640 75.443 50.858 1.00130.64 C ATOM 973 C GLY 127 50.706 76.100 51.677 1.00130.64 C ATOM 974 O GLY 127 51.510 76.875 51.160 1.00130.64 O ATOM 975 N ASP 128 50.734 75.801 52.992 1.00192.47 N ATOM 976 CA ASP 128 51.733 76.375 53.849 1.00192.47 C ATOM 977 CB ASP 128 51.247 77.630 54.595 1.00192.47 C ATOM 978 CG ASP 128 52.434 78.258 55.314 1.00192.47 C ATOM 979 OD1 ASP 128 53.548 77.675 55.246 1.00192.47 O ATOM 980 OD2 ASP 128 52.240 79.335 55.938 1.00192.47 O ATOM 981 C ASP 128 52.086 75.353 54.883 1.00192.47 C ATOM 982 O ASP 128 51.205 74.793 55.533 1.00192.47 O ATOM 983 N CYS 129 53.393 75.064 55.052 1.00 77.89 N ATOM 984 CA CYS 129 53.785 74.118 56.056 1.00 77.89 C ATOM 985 CB CYS 129 54.321 72.795 55.479 1.00 77.89 C ATOM 986 SG CYS 129 54.810 71.619 56.776 1.00 77.89 S ATOM 987 C CYS 129 54.893 74.729 56.854 1.00 77.89 C ATOM 988 O CYS 129 55.717 75.470 56.323 1.00 77.89 O ATOM 989 N CYS 130 54.922 74.449 58.174 1.00 50.28 N ATOM 990 CA CYS 130 55.971 74.973 59.001 1.00 50.28 C ATOM 991 CB CYS 130 55.577 76.254 59.755 1.00 50.28 C ATOM 992 SG CYS 130 55.244 77.647 58.635 1.00 50.28 S ATOM 993 C CYS 130 56.294 73.939 60.032 1.00 50.28 C ATOM 994 O CYS 130 55.441 73.137 60.408 1.00 50.28 O ATOM 995 N THR 131 57.559 73.919 60.502 1.00278.89 N ATOM 996 CA THR 131 57.937 72.975 61.514 1.00278.89 C ATOM 997 CB THR 131 58.729 71.816 60.987 1.00278.89 C ATOM 998 OG1 THR 131 58.908 70.840 62.002 1.00278.89 O ATOM 999 CG2 THR 131 60.093 72.332 60.497 1.00278.89 C ATOM 1000 C THR 131 58.805 73.685 62.503 1.00278.89 C ATOM 1001 O THR 131 59.440 74.687 62.179 1.00278.89 O ATOM 1002 N ASN 132 58.835 73.188 63.758 1.00261.63 N ATOM 1003 CA ASN 132 59.670 73.792 64.755 1.00261.63 C ATOM 1004 CB ASN 132 58.888 74.588 65.815 1.00261.63 C ATOM 1005 CG ASN 132 58.286 75.810 65.136 1.00261.63 C ATOM 1006 OD1 ASN 132 57.070 75.994 65.126 1.00261.63 O ATOM 1007 ND2 ASN 132 59.160 76.671 64.552 1.00261.63 N ATOM 1008 C ASN 132 60.381 72.689 65.473 1.00261.63 C ATOM 1009 O ASN 132 59.811 71.626 65.712 1.00261.63 O ATOM 1010 N TYR 133 61.664 72.910 65.818 1.00338.78 N ATOM 1011 CA TYR 133 62.405 71.906 66.525 1.00338.78 C ATOM 1012 CB TYR 133 63.488 71.242 65.655 1.00338.78 C ATOM 1013 CG TYR 133 64.196 70.218 66.470 1.00338.78 C ATOM 1014 CD1 TYR 133 63.630 68.980 66.676 1.00338.78 C ATOM 1015 CD2 TYR 133 65.430 70.487 67.018 1.00338.78 C ATOM 1016 CE1 TYR 133 64.280 68.027 67.422 1.00338.78 C ATOM 1017 CE2 TYR 133 66.084 69.535 67.765 1.00338.78 C ATOM 1018 CZ TYR 133 65.508 68.304 67.970 1.00338.78 C ATOM 1019 OH TYR 133 66.178 67.327 68.736 1.00338.78 H ATOM 1020 C TYR 133 63.089 72.584 67.671 1.00338.78 C ATOM 1021 O TYR 133 63.602 73.694 67.524 1.00338.78 O ATOM 1022 N GLN 134 63.098 71.945 68.861 1.00295.87 N ATOM 1023 CA GLN 134 63.756 72.557 69.979 1.00295.87 C ATOM 1024 CB GLN 134 62.818 73.401 70.859 1.00295.87 C ATOM 1025 CG GLN 134 63.521 74.053 72.051 1.00295.87 C ATOM 1026 CD GLN 134 62.487 74.853 72.829 1.00295.87 C ATOM 1027 OE1 GLN 134 62.803 75.491 73.832 1.00295.87 O ATOM 1028 NE2 GLN 134 61.212 74.817 72.358 1.00295.87 N ATOM 1029 C GLN 134 64.312 71.475 70.852 1.00295.87 C ATOM 1030 O GLN 134 63.792 70.361 70.884 1.00295.87 O ATOM 1031 N VAL 135 65.413 71.779 71.568 1.00 54.64 N ATOM 1032 CA VAL 135 65.996 70.826 72.470 1.00 54.64 C ATOM 1033 CB VAL 135 67.150 70.071 71.879 1.00 54.64 C ATOM 1034 CG1 VAL 135 67.763 69.171 72.966 1.00 54.64 C ATOM 1035 CG2 VAL 135 66.645 69.297 70.651 1.00 54.64 C ATOM 1036 C VAL 135 66.528 71.591 73.640 1.00 54.64 C ATOM 1037 O VAL 135 66.877 72.764 73.517 1.00 54.64 O ATOM 1038 N VAL 136 66.583 70.945 74.823 1.00 79.32 N ATOM 1039 CA VAL 136 67.113 71.611 75.978 1.00 79.32 C ATOM 1040 CB VAL 136 66.057 72.095 76.927 1.00 79.32 C ATOM 1041 CG1 VAL 136 65.198 73.148 76.208 1.00 79.32 C ATOM 1042 CG2 VAL 136 65.261 70.880 77.433 1.00 79.32 C ATOM 1043 C VAL 136 67.951 70.625 76.725 1.00 79.32 C ATOM 1044 O VAL 136 67.692 69.422 76.692 1.00 79.32 O ATOM 1045 N CYS 137 69.006 71.115 77.408 1.00 76.84 N ATOM 1046 CA CYS 137 69.843 70.243 78.181 1.00 76.84 C ATOM 1047 CB CYS 137 71.080 69.741 77.419 1.00 76.84 C ATOM 1048 SG CYS 137 72.118 68.638 78.425 1.00 76.84 S ATOM 1049 C CYS 137 70.337 71.026 79.355 1.00 76.84 C ATOM 1050 O CYS 137 70.342 72.256 79.330 1.00 76.84 O ATOM 1051 N LYS 138 70.749 70.328 80.431 1.00168.19 N ATOM 1052 CA LYS 138 71.266 71.029 81.571 1.00168.19 C ATOM 1053 CB LYS 138 70.637 70.582 82.902 1.00168.19 C ATOM 1054 CG LYS 138 71.182 71.336 84.117 1.00168.19 C ATOM 1055 CD LYS 138 70.351 71.133 85.385 1.00168.19 C ATOM 1056 CE LYS 138 68.999 71.848 85.351 1.00168.19 C ATOM 1057 NZ LYS 138 68.262 71.601 86.611 1.00168.19 N ATOM 1058 C LYS 138 72.727 70.731 81.646 1.00168.19 C ATOM 1059 O LYS 138 73.138 69.676 82.129 1.00168.19 O ATOM 1060 N GLY 139 73.552 71.669 81.148 1.00121.57 N ATOM 1061 CA GLY 139 74.977 71.518 81.146 1.00121.57 C ATOM 1062 C GLY 139 75.508 71.573 82.544 1.00121.57 C ATOM 1063 O GLY 139 76.428 70.837 82.897 1.00121.57 O ATOM 1064 N GLU 140 74.934 72.457 83.380 1.00223.20 N ATOM 1065 CA GLU 140 75.471 72.698 84.688 1.00223.20 C ATOM 1066 CB GLU 140 74.721 73.795 85.464 1.00223.20 C ATOM 1067 CG GLU 140 74.870 75.189 84.850 1.00223.20 C ATOM 1068 CD GLU 140 74.086 76.167 85.713 1.00223.20 C ATOM 1069 OE1 GLU 140 73.485 75.715 86.723 1.00223.20 O ATOM 1070 OE2 GLU 140 74.075 77.381 85.370 1.00223.20 O ATOM 1071 C GLU 140 75.435 71.458 85.520 1.00223.20 C ATOM 1072 O GLU 140 74.474 70.689 85.493 1.00223.20 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 101.16 23.9 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 107.99 16.1 62 100.0 62 ARMSMC BURIED . . . . . . . . 82.62 42.3 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 107.14 28.2 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 109.59 25.0 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 105.81 30.8 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 109.74 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.54 56.5 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 75.31 61.1 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 89.92 50.0 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 78.26 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.98 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 75.27 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 76.36 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 98.44 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 114.06 50.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 114.06 50.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 109.04 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 123.47 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 40.77 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 40.77 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.9059 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 44.25 32 100.0 32 CRMSCA BURIED . . . . . . . . 30.55 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 40.67 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 44.19 156 100.0 156 CRMSMC BURIED . . . . . . . . 30.64 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 41.11 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 41.96 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 44.68 112 100.0 112 CRMSSC BURIED . . . . . . . . 32.27 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 40.94 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 44.47 240 100.0 240 CRMSALL BURIED . . . . . . . . 31.43 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 181.979 0.674 0.710 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 180.137 0.641 0.683 32 100.0 32 ERRCA BURIED . . . . . . . . 186.512 0.757 0.777 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 183.777 0.677 0.712 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 182.699 0.645 0.685 156 100.0 156 ERRMC BURIED . . . . . . . . 186.363 0.755 0.776 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 217.946 0.722 0.750 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 221.388 0.726 0.757 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 214.174 0.692 0.724 112 100.0 112 ERRSC BURIED . . . . . . . . 225.916 0.784 0.804 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 199.181 0.697 0.729 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 196.026 0.665 0.702 240 100.0 240 ERRALL BURIED . . . . . . . . 206.393 0.771 0.791 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 4 8 45 45 DISTCA CA (P) 0.00 0.00 4.44 8.89 17.78 45 DISTCA CA (RMS) 0.00 0.00 2.88 3.56 5.98 DISTCA ALL (N) 0 0 7 20 50 345 345 DISTALL ALL (P) 0.00 0.00 2.03 5.80 14.49 345 DISTALL ALL (RMS) 0.00 0.00 2.65 3.65 6.41 DISTALL END of the results output