####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS299_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS299_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.08 2.08 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.86 2.11 LONGEST_CONTINUOUS_SEGMENT: 44 97 - 140 1.94 2.09 LCS_AVERAGE: 97.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 114 - 139 0.85 2.16 LCS_AVERAGE: 43.90 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 44 45 3 3 3 3 3 3 8 35 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 44 45 3 3 3 6 13 26 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 44 45 3 3 4 12 21 23 38 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 14 44 45 13 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 14 44 45 11 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 14 44 45 7 27 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 14 44 45 7 22 33 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 14 44 45 8 24 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 14 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 14 44 45 7 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 14 44 45 4 5 10 24 34 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 14 44 45 6 21 35 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 5 44 45 4 6 13 20 29 35 40 41 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 26 44 45 6 18 35 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 26 44 45 6 25 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 26 44 45 9 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 26 44 45 9 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 26 44 45 4 27 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 26 44 45 11 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 26 44 45 11 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 26 44 45 7 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 26 44 45 11 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 26 44 45 11 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 26 44 45 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 26 44 45 14 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 26 44 45 3 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 44 45 3 3 3 4 4 5 30 33 40 42 43 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 80.56 ( 43.90 97.78 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 28 36 39 39 40 40 42 43 44 44 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 35.56 62.22 80.00 86.67 86.67 88.89 88.89 93.33 95.56 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.59 0.80 1.00 1.00 1.13 1.13 1.53 1.69 1.86 1.86 2.08 2.08 2.08 2.08 2.08 2.08 2.08 2.08 2.08 GDT RMS_ALL_AT 2.31 2.24 2.21 2.16 2.16 2.14 2.14 2.11 2.10 2.11 2.11 2.08 2.08 2.08 2.08 2.08 2.08 2.08 2.08 2.08 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: E 114 E 114 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 5.537 0 0.712 1.448 6.872 20.595 31.905 LGA A 97 A 97 4.562 0 0.088 0.092 5.337 34.286 32.667 LGA R 98 R 98 4.677 0 0.645 1.168 12.658 38.929 15.368 LGA G 99 G 99 0.635 0 0.308 0.308 0.948 90.476 90.476 LGA W 100 W 100 0.183 0 0.054 0.314 1.753 95.238 86.803 LGA E 101 E 101 0.849 0 0.124 0.617 2.839 86.071 78.889 LGA C 102 C 102 0.888 0 0.056 0.640 2.146 85.952 83.175 LGA T 103 T 103 1.467 0 0.028 0.246 2.984 79.286 70.884 LGA K 104 K 104 1.471 0 0.061 1.481 6.675 77.143 64.180 LGA D 105 D 105 2.445 0 0.133 0.168 2.848 62.857 60.000 LGA R 106 R 106 0.834 0 0.153 0.824 3.168 88.214 81.861 LGA C 107 C 107 1.436 0 0.070 0.818 2.682 81.429 74.603 LGA G 108 G 108 0.943 0 0.153 0.153 1.124 88.214 88.214 LGA E 109 E 109 1.095 0 0.050 0.973 3.776 85.952 77.513 LGA V 110 V 110 1.197 0 0.677 0.957 3.855 71.429 63.605 LGA R 111 R 111 3.364 0 0.102 1.108 13.581 50.357 21.602 LGA N 112 N 112 1.905 0 0.060 0.508 6.131 68.810 57.202 LGA E 113 E 113 5.233 0 0.205 1.363 10.880 35.952 17.513 LGA E 114 E 114 1.985 0 0.578 0.925 6.750 63.214 46.720 LGA N 115 N 115 0.924 0 0.053 1.291 3.966 90.595 77.262 LGA A 116 A 116 0.699 0 0.034 0.055 1.184 92.857 90.571 LGA C 117 C 117 0.308 0 0.040 0.142 1.364 97.619 93.730 LGA H 118 H 118 0.621 0 0.114 1.064 2.330 88.214 81.762 LGA C 119 C 119 0.594 0 0.153 0.304 1.246 95.238 92.143 LGA S 120 S 120 0.295 0 0.024 0.577 1.842 95.238 90.714 LGA E 121 E 121 0.923 0 0.120 0.882 3.052 88.214 79.048 LGA D 122 D 122 0.309 0 0.187 1.078 4.244 97.619 80.952 LGA C 123 C 123 0.401 0 0.071 0.129 1.087 92.976 93.730 LGA L 124 L 124 1.376 0 0.055 0.941 4.514 81.548 67.321 LGA S 125 S 125 1.336 0 0.221 0.553 2.902 77.262 74.603 LGA R 126 R 126 1.229 0 0.176 1.467 8.283 79.286 56.883 LGA G 127 G 127 0.734 0 0.106 0.106 0.734 90.476 90.476 LGA D 128 D 128 0.863 0 0.185 1.246 2.996 88.214 82.976 LGA C 129 C 129 0.863 0 0.030 0.158 0.950 92.857 92.063 LGA C 130 C 130 0.435 0 0.039 0.068 1.234 95.238 92.143 LGA T 131 T 131 1.196 0 0.159 0.147 2.288 88.214 79.320 LGA N 132 N 132 0.645 0 0.200 0.324 1.236 88.214 88.214 LGA Y 133 Y 133 0.366 0 0.083 0.400 1.366 100.000 92.222 LGA Q 134 Q 134 0.929 0 0.087 0.713 4.970 90.476 68.677 LGA V 135 V 135 0.793 0 0.041 1.178 3.269 92.857 82.381 LGA V 136 V 136 0.215 0 0.120 0.142 0.795 97.619 95.918 LGA C 137 C 137 0.483 0 0.163 0.714 3.261 92.976 85.397 LGA K 138 K 138 1.154 0 0.216 0.678 6.402 85.952 61.958 LGA G 139 G 139 1.504 0 0.689 0.689 4.374 62.143 62.143 LGA E 140 E 140 6.615 0 0.204 1.274 12.201 15.595 7.619 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.082 2.114 3.510 79.153 71.187 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 42 1.53 85.556 91.092 2.578 LGA_LOCAL RMSD: 1.529 Number of atoms: 42 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.108 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.082 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.358319 * X + -0.713286 * Y + -0.602354 * Z + 23.652342 Y_new = 0.861285 * X + 0.501535 * Y + -0.081552 * Z + 96.964981 Z_new = 0.360271 * X + -0.489577 * Y + 0.794053 * Z + -40.295719 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.176549 -0.368558 -0.552503 [DEG: 67.4113 -21.1168 -31.6561 ] ZXZ: -1.436226 0.653349 2.507188 [DEG: -82.2897 37.4341 143.6513 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS299_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS299_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 42 1.53 91.092 2.08 REMARK ---------------------------------------------------------- MOLECULE T0543TS299_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 17.221 86.974 25.102 1.00 99.99 N ATOM 729 CA THR 96 17.492 87.369 23.752 1.00 99.99 C ATOM 730 C THR 96 16.182 87.758 23.142 1.00 99.99 C ATOM 731 O THR 96 15.128 87.604 23.758 1.00 99.99 O ATOM 732 CB THR 96 18.050 86.261 22.909 1.00 99.99 C ATOM 733 OG1 THR 96 17.101 85.211 22.792 1.00 99.99 O ATOM 734 CG2 THR 96 19.339 85.741 23.569 1.00 99.99 C ATOM 735 N ALA 97 16.216 88.319 21.917 1.00 99.99 N ATOM 736 CA ALA 97 14.984 88.679 21.277 1.00 99.99 C ATOM 737 C ALA 97 14.775 87.709 20.168 1.00 99.99 C ATOM 738 O ALA 97 15.667 87.476 19.353 1.00 99.99 O ATOM 739 CB ALA 97 15.003 90.087 20.657 1.00 99.99 C ATOM 740 N ARG 98 13.575 87.103 20.113 1.00 99.99 N ATOM 741 CA ARG 98 13.320 86.150 19.079 1.00 99.99 C ATOM 742 C ARG 98 12.021 86.510 18.445 1.00 99.99 C ATOM 743 O ARG 98 11.080 86.922 19.121 1.00 99.99 O ATOM 744 CB ARG 98 13.178 84.710 19.604 1.00 99.99 C ATOM 745 CG ARG 98 14.472 84.131 20.180 1.00 99.99 C ATOM 746 CD ARG 98 15.216 83.217 19.203 1.00 99.99 C ATOM 747 NE ARG 98 15.718 84.066 18.087 1.00 99.99 N ATOM 748 CZ ARG 98 16.947 84.654 18.172 1.00 99.99 C ATOM 749 NH1 ARG 98 17.740 84.424 19.258 1.00 99.99 H ATOM 750 NH2 ARG 98 17.383 85.469 17.168 1.00 99.99 H ATOM 751 N GLY 99 11.945 86.376 17.109 1.00 99.99 N ATOM 752 CA GLY 99 10.718 86.638 16.420 1.00 99.99 C ATOM 753 C GLY 99 10.517 85.480 15.497 1.00 99.99 C ATOM 754 O GLY 99 11.247 85.294 14.526 1.00 99.99 O ATOM 755 N TRP 100 9.496 84.672 15.807 1.00 99.99 N ATOM 756 CA TRP 100 9.122 83.471 15.125 1.00 99.99 C ATOM 757 C TRP 100 8.423 83.765 13.843 1.00 99.99 C ATOM 758 O TRP 100 7.962 82.836 13.188 1.00 99.99 O ATOM 759 CB TRP 100 8.257 82.538 15.980 1.00 99.99 C ATOM 760 CG TRP 100 9.051 81.991 17.139 1.00 99.99 C ATOM 761 CD1 TRP 100 8.939 82.242 18.476 1.00 99.99 C ATOM 762 CD2 TRP 100 10.172 81.108 16.983 1.00 99.99 C ATOM 763 NE1 TRP 100 9.918 81.565 19.163 1.00 99.99 N ATOM 764 CE2 TRP 100 10.686 80.864 18.256 1.00 99.99 C ATOM 765 CE3 TRP 100 10.733 80.555 15.868 1.00 99.99 C ATOM 766 CZ2 TRP 100 11.775 80.060 18.433 1.00 99.99 C ATOM 767 CZ3 TRP 100 11.825 79.735 16.051 1.00 99.99 C ATOM 768 CH2 TRP 100 12.335 79.492 17.310 1.00 99.99 H ATOM 769 N GLU 101 8.201 85.048 13.512 1.00 99.99 N ATOM 770 CA GLU 101 7.425 85.346 12.340 1.00 99.99 C ATOM 771 C GLU 101 8.246 86.017 11.284 1.00 99.99 C ATOM 772 O GLU 101 9.389 86.415 11.503 1.00 99.99 O ATOM 773 CB GLU 101 6.257 86.288 12.639 1.00 99.99 C ATOM 774 CG GLU 101 5.249 85.690 13.614 1.00 99.99 C ATOM 775 CD GLU 101 4.161 86.724 13.827 1.00 99.99 C ATOM 776 OE1 GLU 101 4.423 87.700 14.580 1.00 99.99 O ATOM 777 OE2 GLU 101 3.062 86.563 13.232 1.00 99.99 O ATOM 778 N CYS 102 7.646 86.132 10.079 1.00 99.99 N ATOM 779 CA CYS 102 8.281 86.730 8.942 1.00 99.99 C ATOM 780 C CYS 102 7.401 87.859 8.482 1.00 99.99 C ATOM 781 O CYS 102 6.217 87.907 8.817 1.00 99.99 O ATOM 782 CB CYS 102 8.412 85.722 7.785 1.00 99.99 C ATOM 783 SG CYS 102 9.432 86.278 6.396 1.00 99.99 S ATOM 784 N THR 103 7.972 88.803 7.701 1.00 99.99 N ATOM 785 CA THR 103 7.248 89.942 7.205 1.00 99.99 C ATOM 786 C THR 103 7.222 89.830 5.720 1.00 99.99 C ATOM 787 O THR 103 8.041 89.142 5.116 1.00 99.99 O ATOM 788 CB THR 103 7.925 91.256 7.437 1.00 99.99 C ATOM 789 OG1 THR 103 9.156 91.276 6.736 1.00 99.99 O ATOM 790 CG2 THR 103 8.191 91.454 8.928 1.00 99.99 C ATOM 791 N LYS 104 6.282 90.548 5.087 1.00 99.99 N ATOM 792 CA LYS 104 6.143 90.449 3.668 1.00 99.99 C ATOM 793 C LYS 104 7.413 90.893 3.027 1.00 99.99 C ATOM 794 O LYS 104 7.921 90.232 2.123 1.00 99.99 O ATOM 795 CB LYS 104 4.992 91.316 3.142 1.00 99.99 C ATOM 796 CG LYS 104 3.640 90.848 3.682 1.00 99.99 C ATOM 797 CD LYS 104 2.511 91.858 3.496 1.00 99.99 C ATOM 798 CE LYS 104 1.168 91.371 4.043 1.00 99.99 C ATOM 799 NZ LYS 104 1.184 91.393 5.521 1.00 99.99 N ATOM 800 N ASP 105 7.976 92.017 3.497 1.00 99.99 N ATOM 801 CA ASP 105 9.182 92.530 2.921 1.00 99.99 C ATOM 802 C ASP 105 10.305 91.580 3.181 1.00 99.99 C ATOM 803 O ASP 105 11.167 91.373 2.329 1.00 99.99 O ATOM 804 CB ASP 105 9.567 93.923 3.457 1.00 99.99 C ATOM 805 CG ASP 105 9.724 93.864 4.969 1.00 99.99 C ATOM 806 OD1 ASP 105 8.709 93.573 5.655 1.00 99.99 O ATOM 807 OD2 ASP 105 10.859 94.109 5.458 1.00 99.99 O ATOM 808 N ARG 106 10.306 90.944 4.361 1.00 99.99 N ATOM 809 CA ARG 106 11.391 90.085 4.721 1.00 99.99 C ATOM 810 C ARG 106 11.484 88.956 3.756 1.00 99.99 C ATOM 811 O ARG 106 12.590 88.509 3.452 1.00 99.99 O ATOM 812 CB ARG 106 11.284 89.533 6.156 1.00 99.99 C ATOM 813 CG ARG 106 11.793 90.523 7.211 1.00 99.99 C ATOM 814 CD ARG 106 11.383 90.205 8.653 1.00 99.99 C ATOM 815 NE ARG 106 11.673 88.769 8.927 1.00 99.99 N ATOM 816 CZ ARG 106 12.904 88.367 9.358 1.00 99.99 C ATOM 817 NH1 ARG 106 13.910 89.275 9.518 1.00 99.99 H ATOM 818 NH2 ARG 106 13.128 87.049 9.636 1.00 99.99 H ATOM 819 N CYS 107 10.350 88.453 3.229 1.00 99.99 N ATOM 820 CA CYS 107 10.561 87.313 2.394 1.00 99.99 C ATOM 821 C CYS 107 11.320 87.700 1.166 1.00 99.99 C ATOM 822 O CYS 107 11.130 88.774 0.596 1.00 99.99 O ATOM 823 CB CYS 107 9.333 86.425 2.106 1.00 99.99 C ATOM 824 SG CYS 107 8.157 86.955 0.840 1.00 99.99 S ATOM 825 N GLY 108 12.245 86.809 0.754 1.00 99.99 N ATOM 826 CA GLY 108 13.109 87.080 -0.356 1.00 99.99 C ATOM 827 C GLY 108 14.257 87.918 0.130 1.00 99.99 C ATOM 828 O GLY 108 14.789 88.737 -0.621 1.00 99.99 O ATOM 829 N GLU 109 14.670 87.738 1.405 1.00 99.99 N ATOM 830 CA GLU 109 15.743 88.528 1.955 1.00 99.99 C ATOM 831 C GLU 109 17.010 87.721 2.005 1.00 99.99 C ATOM 832 O GLU 109 17.006 86.526 2.295 1.00 99.99 O ATOM 833 CB GLU 109 15.450 89.056 3.373 1.00 99.99 C ATOM 834 CG GLU 109 15.188 87.958 4.406 1.00 99.99 C ATOM 835 CD GLU 109 16.527 87.436 4.903 1.00 99.99 C ATOM 836 OE1 GLU 109 17.540 88.170 4.748 1.00 99.99 O ATOM 837 OE2 GLU 109 16.555 86.302 5.449 1.00 99.99 O ATOM 838 N VAL 110 18.120 88.381 1.625 1.00 99.99 N ATOM 839 CA VAL 110 19.460 87.871 1.533 1.00 99.99 C ATOM 840 C VAL 110 20.223 87.776 2.832 1.00 99.99 C ATOM 841 O VAL 110 21.144 86.966 2.940 1.00 99.99 O ATOM 842 CB VAL 110 20.279 88.682 0.575 1.00 99.99 C ATOM 843 CG1 VAL 110 21.702 88.104 0.507 1.00 99.99 C ATOM 844 CG2 VAL 110 19.545 88.699 -0.776 1.00 99.99 C ATOM 845 N ARG 111 19.954 88.641 3.835 1.00 99.99 N ATOM 846 CA ARG 111 20.800 88.539 4.998 1.00 99.99 C ATOM 847 C ARG 111 20.020 88.787 6.250 1.00 99.99 C ATOM 848 O ARG 111 19.048 89.540 6.266 1.00 99.99 O ATOM 849 CB ARG 111 21.990 89.509 4.971 1.00 99.99 C ATOM 850 CG ARG 111 23.111 89.030 4.047 1.00 99.99 C ATOM 851 CD ARG 111 24.105 90.124 3.662 1.00 99.99 C ATOM 852 NE ARG 111 23.414 90.982 2.662 1.00 99.99 N ATOM 853 CZ ARG 111 23.450 90.626 1.346 1.00 99.99 C ATOM 854 NH1 ARG 111 24.152 89.520 0.963 1.00 99.99 H ATOM 855 NH2 ARG 111 22.789 91.372 0.414 1.00 99.99 H ATOM 856 N ASN 112 20.424 88.116 7.349 1.00 99.99 N ATOM 857 CA ASN 112 19.753 88.334 8.597 1.00 99.99 C ATOM 858 C ASN 112 20.793 88.237 9.670 1.00 99.99 C ATOM 859 O ASN 112 21.563 87.278 9.704 1.00 99.99 O ATOM 860 CB ASN 112 18.658 87.292 8.874 1.00 99.99 C ATOM 861 CG ASN 112 17.735 87.859 9.937 1.00 99.99 C ATOM 862 OD1 ASN 112 18.136 88.087 11.077 1.00 99.99 O ATOM 863 ND2 ASN 112 16.456 88.111 9.548 1.00 99.99 N ATOM 864 N GLU 113 20.882 89.256 10.549 1.00 99.99 N ATOM 865 CA GLU 113 21.898 89.204 11.561 1.00 99.99 C ATOM 866 C GLU 113 21.572 88.156 12.580 1.00 99.99 C ATOM 867 O GLU 113 22.349 87.231 12.803 1.00 99.99 O ATOM 868 CB GLU 113 22.074 90.544 12.294 1.00 99.99 C ATOM 869 CG GLU 113 23.427 90.688 12.997 1.00 99.99 C ATOM 870 CD GLU 113 23.412 89.902 14.300 1.00 99.99 C ATOM 871 OE1 GLU 113 22.791 90.393 15.280 1.00 99.99 O ATOM 872 OE2 GLU 113 24.029 88.805 14.336 1.00 99.99 O ATOM 873 N GLU 114 20.383 88.249 13.204 1.00 99.99 N ATOM 874 CA GLU 114 20.055 87.269 14.196 1.00 99.99 C ATOM 875 C GLU 114 18.590 87.032 14.096 1.00 99.99 C ATOM 876 O GLU 114 17.783 87.887 14.455 1.00 99.99 O ATOM 877 CB GLU 114 20.353 87.733 15.631 1.00 99.99 C ATOM 878 CG GLU 114 20.005 86.692 16.693 1.00 99.99 C ATOM 879 CD GLU 114 20.354 87.281 18.050 1.00 99.99 C ATOM 880 OE1 GLU 114 21.569 87.443 18.335 1.00 99.99 O ATOM 881 OE2 GLU 114 19.402 87.583 18.819 1.00 99.99 O ATOM 882 N ASN 115 18.217 85.841 13.598 1.00 99.99 N ATOM 883 CA ASN 115 16.831 85.534 13.446 1.00 99.99 C ATOM 884 C ASN 115 16.638 84.085 13.733 1.00 99.99 C ATOM 885 O ASN 115 17.431 83.241 13.318 1.00 99.99 O ATOM 886 CB ASN 115 16.304 85.848 12.031 1.00 99.99 C ATOM 887 CG ASN 115 17.169 85.127 11.000 1.00 99.99 C ATOM 888 OD1 ASN 115 18.225 84.576 11.308 1.00 99.99 O ATOM 889 ND2 ASN 115 16.722 85.153 9.716 1.00 99.99 N ATOM 890 N ALA 116 15.574 83.766 14.490 1.00 99.99 N ATOM 891 CA ALA 116 15.282 82.404 14.812 1.00 99.99 C ATOM 892 C ALA 116 14.946 81.695 13.544 1.00 99.99 C ATOM 893 O ALA 116 15.413 80.583 13.302 1.00 99.99 O ATOM 894 CB ALA 116 14.073 82.258 15.755 1.00 99.99 C ATOM 895 N CYS 117 14.139 82.342 12.683 1.00 99.99 N ATOM 896 CA CYS 117 13.720 81.695 11.474 1.00 99.99 C ATOM 897 C CYS 117 14.228 82.490 10.313 1.00 99.99 C ATOM 898 O CYS 117 14.692 83.617 10.486 1.00 99.99 O ATOM 899 CB CYS 117 12.189 81.554 11.337 1.00 99.99 C ATOM 900 SG CYS 117 11.333 83.151 11.230 1.00 99.99 S ATOM 901 N HIS 118 14.177 81.903 9.095 1.00 99.99 N ATOM 902 CA HIS 118 14.691 82.572 7.934 1.00 99.99 C ATOM 903 C HIS 118 13.591 82.805 6.937 1.00 99.99 C ATOM 904 O HIS 118 12.836 81.905 6.580 1.00 99.99 O ATOM 905 CB HIS 118 15.794 81.774 7.214 1.00 99.99 C ATOM 906 CG HIS 118 17.037 81.636 8.042 1.00 99.99 C ATOM 907 ND1 HIS 118 18.141 82.450 7.921 1.00 99.99 N ATOM 908 CD2 HIS 118 17.331 80.759 9.039 1.00 99.99 C ATOM 909 CE1 HIS 118 19.041 82.028 8.845 1.00 99.99 C ATOM 910 NE2 HIS 118 18.594 81.004 9.548 1.00 99.99 N ATOM 911 N CYS 119 13.474 84.078 6.514 1.00 99.99 N ATOM 912 CA CYS 119 12.578 84.634 5.538 1.00 99.99 C ATOM 913 C CYS 119 13.035 84.372 4.127 1.00 99.99 C ATOM 914 O CYS 119 12.331 84.720 3.180 1.00 99.99 O ATOM 915 CB CYS 119 12.355 86.142 5.733 1.00 99.99 C ATOM 916 SG CYS 119 11.298 86.427 7.181 1.00 99.99 S ATOM 917 N SER 120 14.270 83.857 3.949 1.00 99.99 N ATOM 918 CA SER 120 14.865 83.655 2.648 1.00 99.99 C ATOM 919 C SER 120 14.272 82.466 1.955 1.00 99.99 C ATOM 920 O SER 120 13.669 81.593 2.569 1.00 99.99 O ATOM 921 CB SER 120 16.358 83.292 2.699 1.00 99.99 C ATOM 922 OG SER 120 17.091 84.231 3.461 1.00 99.99 O ATOM 923 N GLU 121 14.477 82.409 0.621 1.00 99.99 N ATOM 924 CA GLU 121 14.030 81.339 -0.225 1.00 99.99 C ATOM 925 C GLU 121 14.789 80.100 0.128 1.00 99.99 C ATOM 926 O GLU 121 14.265 78.990 0.051 1.00 99.99 O ATOM 927 CB GLU 121 14.248 81.626 -1.720 1.00 99.99 C ATOM 928 CG GLU 121 13.348 82.747 -2.248 1.00 99.99 C ATOM 929 CD GLU 121 13.644 82.951 -3.727 1.00 99.99 C ATOM 930 OE1 GLU 121 13.471 81.975 -4.505 1.00 99.99 O ATOM 931 OE2 GLU 121 14.044 84.085 -4.098 1.00 99.99 O ATOM 932 N ASP 122 16.051 80.268 0.555 1.00 99.99 N ATOM 933 CA ASP 122 16.919 79.166 0.851 1.00 99.99 C ATOM 934 C ASP 122 16.261 78.344 1.914 1.00 99.99 C ATOM 935 O ASP 122 16.441 77.128 1.971 1.00 99.99 O ATOM 936 CB ASP 122 18.287 79.623 1.388 1.00 99.99 C ATOM 937 CG ASP 122 19.236 78.432 1.362 1.00 99.99 C ATOM 938 OD1 ASP 122 18.779 77.316 0.998 1.00 99.99 O ATOM 939 OD2 ASP 122 20.433 78.624 1.705 1.00 99.99 O ATOM 940 N CYS 123 15.450 78.990 2.769 1.00 99.99 N ATOM 941 CA CYS 123 14.821 78.292 3.851 1.00 99.99 C ATOM 942 C CYS 123 13.996 77.200 3.269 1.00 99.99 C ATOM 943 O CYS 123 13.829 76.153 3.884 1.00 99.99 O ATOM 944 CB CYS 123 13.858 79.152 4.702 1.00 99.99 C ATOM 945 SG CYS 123 12.276 79.526 3.878 1.00 99.99 S ATOM 946 N LEU 124 13.431 77.399 2.070 1.00 99.99 N ATOM 947 CA LEU 124 12.611 76.345 1.559 1.00 99.99 C ATOM 948 C LEU 124 13.438 75.108 1.376 1.00 99.99 C ATOM 949 O LEU 124 13.005 74.014 1.734 1.00 99.99 O ATOM 950 CB LEU 124 11.935 76.707 0.229 1.00 99.99 C ATOM 951 CG LEU 124 10.922 77.855 0.397 1.00 99.99 C ATOM 952 CD1 LEU 124 11.617 79.168 0.789 1.00 99.99 C ATOM 953 CD2 LEU 124 10.023 78.000 -0.834 1.00 99.99 C ATOM 954 N SER 125 14.658 75.236 0.823 1.00 99.99 N ATOM 955 CA SER 125 15.464 74.066 0.613 1.00 99.99 C ATOM 956 C SER 125 15.843 73.459 1.932 1.00 99.99 C ATOM 957 O SER 125 15.595 72.279 2.174 1.00 99.99 O ATOM 958 CB SER 125 16.767 74.368 -0.145 1.00 99.99 C ATOM 959 OG SER 125 17.518 73.176 -0.321 1.00 99.99 O ATOM 960 N ARG 126 16.440 74.271 2.827 1.00 99.99 N ATOM 961 CA ARG 126 16.954 73.811 4.091 1.00 99.99 C ATOM 962 C ARG 126 15.868 73.306 4.993 1.00 99.99 C ATOM 963 O ARG 126 16.026 72.263 5.627 1.00 99.99 O ATOM 964 CB ARG 126 17.691 74.910 4.872 1.00 99.99 C ATOM 965 CG ARG 126 18.123 74.450 6.264 1.00 99.99 C ATOM 966 CD ARG 126 19.192 73.359 6.238 1.00 99.99 C ATOM 967 NE ARG 126 19.316 72.798 7.614 1.00 99.99 N ATOM 968 CZ ARG 126 20.212 73.324 8.498 1.00 99.99 C ATOM 969 NH1 ARG 126 20.980 74.394 8.136 1.00 99.99 H ATOM 970 NH2 ARG 126 20.344 72.775 9.741 1.00 99.99 H ATOM 971 N GLY 127 14.720 74.008 5.051 1.00 99.99 N ATOM 972 CA GLY 127 13.673 73.651 5.967 1.00 99.99 C ATOM 973 C GLY 127 13.673 74.607 7.134 1.00 99.99 C ATOM 974 O GLY 127 13.077 74.324 8.173 1.00 99.99 O ATOM 975 N ASP 128 14.387 75.744 6.991 1.00 99.99 N ATOM 976 CA ASP 128 14.527 76.825 7.941 1.00 99.99 C ATOM 977 C ASP 128 13.304 77.710 8.022 1.00 99.99 C ATOM 978 O ASP 128 13.155 78.477 8.973 1.00 99.99 O ATOM 979 CB ASP 128 15.745 77.717 7.643 1.00 99.99 C ATOM 980 CG ASP 128 16.994 76.920 8.003 1.00 99.99 C ATOM 981 OD1 ASP 128 16.846 75.900 8.726 1.00 99.99 O ATOM 982 OD2 ASP 128 18.109 77.320 7.572 1.00 99.99 O ATOM 983 N CYS 129 12.401 77.651 7.024 1.00 99.99 N ATOM 984 CA CYS 129 11.314 78.591 6.892 1.00 99.99 C ATOM 985 C CYS 129 10.543 78.794 8.170 1.00 99.99 C ATOM 986 O CYS 129 10.314 77.877 8.958 1.00 99.99 O ATOM 987 CB CYS 129 10.316 78.183 5.795 1.00 99.99 C ATOM 988 SG CYS 129 11.114 77.889 4.184 1.00 99.99 S ATOM 989 N CYS 130 10.104 80.058 8.376 1.00 99.99 N ATOM 990 CA CYS 130 9.388 80.507 9.540 1.00 99.99 C ATOM 991 C CYS 130 8.055 79.835 9.532 1.00 99.99 C ATOM 992 O CYS 130 7.592 79.349 8.503 1.00 99.99 O ATOM 993 CB CYS 130 9.064 82.013 9.536 1.00 99.99 C ATOM 994 SG CYS 130 10.496 83.116 9.383 1.00 99.99 S ATOM 995 N THR 131 7.396 79.810 10.706 1.00 99.99 N ATOM 996 CA THR 131 6.137 79.144 10.833 1.00 99.99 C ATOM 997 C THR 131 5.167 79.759 9.878 1.00 99.99 C ATOM 998 O THR 131 4.475 79.047 9.153 1.00 99.99 O ATOM 999 CB THR 131 5.549 79.276 12.209 1.00 99.99 C ATOM 1000 OG1 THR 131 5.271 80.638 12.500 1.00 99.99 O ATOM 1001 CG2 THR 131 6.555 78.718 13.228 1.00 99.99 C ATOM 1002 N ASN 132 5.096 81.103 9.841 1.00 99.99 N ATOM 1003 CA ASN 132 4.143 81.725 8.969 1.00 99.99 C ATOM 1004 C ASN 132 4.864 82.261 7.775 1.00 99.99 C ATOM 1005 O ASN 132 4.584 83.370 7.323 1.00 99.99 O ATOM 1006 CB ASN 132 3.448 82.918 9.646 1.00 99.99 C ATOM 1007 CG ASN 132 4.517 83.944 10.006 1.00 99.99 C ATOM 1008 OD1 ASN 132 5.556 83.610 10.572 1.00 99.99 O ATOM 1009 ND2 ASN 132 4.259 85.234 9.660 1.00 99.99 N ATOM 1010 N TYR 133 5.814 81.489 7.219 1.00 99.99 N ATOM 1011 CA TYR 133 6.524 81.980 6.075 1.00 99.99 C ATOM 1012 C TYR 133 5.586 81.980 4.915 1.00 99.99 C ATOM 1013 O TYR 133 5.504 82.948 4.161 1.00 99.99 O ATOM 1014 CB TYR 133 7.754 81.125 5.713 1.00 99.99 C ATOM 1015 CG TYR 133 8.446 81.707 4.523 1.00 99.99 C ATOM 1016 CD1 TYR 133 9.229 82.834 4.642 1.00 99.99 C ATOM 1017 CD2 TYR 133 8.337 81.111 3.288 1.00 99.99 C ATOM 1018 CE1 TYR 133 9.875 83.367 3.551 1.00 99.99 C ATOM 1019 CE2 TYR 133 8.980 81.637 2.192 1.00 99.99 C ATOM 1020 CZ TYR 133 9.751 82.766 2.322 1.00 99.99 C ATOM 1021 OH TYR 133 10.407 83.298 1.191 1.00 99.99 H ATOM 1022 N GLN 134 4.843 80.868 4.766 1.00 99.99 N ATOM 1023 CA GLN 134 3.928 80.656 3.688 1.00 99.99 C ATOM 1024 C GLN 134 2.801 81.623 3.780 1.00 99.99 C ATOM 1025 O GLN 134 2.397 82.214 2.782 1.00 99.99 O ATOM 1026 CB GLN 134 3.301 79.260 3.760 1.00 99.99 C ATOM 1027 CG GLN 134 2.236 79.017 2.699 1.00 99.99 C ATOM 1028 CD GLN 134 1.707 77.605 2.896 1.00 99.99 C ATOM 1029 OE1 GLN 134 1.918 76.990 3.940 1.00 99.99 O ATOM 1030 NE2 GLN 134 0.997 77.073 1.866 1.00 99.99 N ATOM 1031 N VAL 135 2.254 81.820 4.985 1.00 99.99 N ATOM 1032 CA VAL 135 1.118 82.683 5.049 1.00 99.99 C ATOM 1033 C VAL 135 1.514 84.052 4.603 1.00 99.99 C ATOM 1034 O VAL 135 0.844 84.648 3.762 1.00 99.99 O ATOM 1035 CB VAL 135 0.510 82.769 6.422 1.00 99.99 C ATOM 1036 CG1 VAL 135 -0.042 81.382 6.789 1.00 99.99 C ATOM 1037 CG2 VAL 135 1.559 83.289 7.416 1.00 99.99 C ATOM 1038 N VAL 136 2.620 84.588 5.149 1.00 99.99 N ATOM 1039 CA VAL 136 3.003 85.912 4.771 1.00 99.99 C ATOM 1040 C VAL 136 3.474 85.947 3.355 1.00 99.99 C ATOM 1041 O VAL 136 2.932 86.674 2.527 1.00 99.99 O ATOM 1042 CB VAL 136 4.144 86.431 5.583 1.00 99.99 C ATOM 1043 CG1 VAL 136 4.490 87.847 5.104 1.00 99.99 C ATOM 1044 CG2 VAL 136 3.765 86.337 7.060 1.00 99.99 C ATOM 1045 N CYS 137 4.513 85.149 3.049 1.00 99.99 N ATOM 1046 CA CYS 137 5.119 85.239 1.754 1.00 99.99 C ATOM 1047 C CYS 137 4.250 84.669 0.674 1.00 99.99 C ATOM 1048 O CYS 137 4.014 85.306 -0.352 1.00 99.99 O ATOM 1049 CB CYS 137 6.493 84.562 1.681 1.00 99.99 C ATOM 1050 SG CYS 137 7.423 85.150 0.241 1.00 99.99 S ATOM 1051 N LYS 138 3.713 83.456 0.895 1.00 99.99 N ATOM 1052 CA LYS 138 2.949 82.772 -0.108 1.00 99.99 C ATOM 1053 C LYS 138 1.684 83.491 -0.401 1.00 99.99 C ATOM 1054 O LYS 138 1.150 83.319 -1.494 1.00 99.99 O ATOM 1055 CB LYS 138 2.584 81.312 0.210 1.00 99.99 C ATOM 1056 CG LYS 138 3.691 80.319 -0.134 1.00 99.99 C ATOM 1057 CD LYS 138 4.933 80.414 0.749 1.00 99.99 C ATOM 1058 CE LYS 138 5.997 79.397 0.341 1.00 99.99 C ATOM 1059 NZ LYS 138 7.076 79.345 1.348 1.00 99.99 N ATOM 1060 N GLY 139 1.169 84.270 0.575 1.00 99.99 N ATOM 1061 CA GLY 139 -0.089 84.971 0.505 1.00 99.99 C ATOM 1062 C GLY 139 -0.338 85.500 -0.876 1.00 99.99 C ATOM 1063 O GLY 139 0.589 85.804 -1.625 1.00 99.99 O ATOM 1064 N GLU 140 -1.630 85.603 -1.252 1.00 99.99 N ATOM 1065 CA GLU 140 -1.972 86.053 -2.570 1.00 99.99 C ATOM 1066 C GLU 140 -2.176 87.523 -2.533 1.00 99.99 C ATOM 1067 O GLU 140 -3.031 88.032 -1.808 1.00 99.99 O ATOM 1068 CB GLU 140 -3.273 85.435 -3.111 1.00 99.99 C ATOM 1069 CG GLU 140 -3.796 86.102 -4.389 1.00 99.99 C ATOM 1070 CD GLU 140 -2.872 85.758 -5.549 1.00 99.99 C ATOM 1071 OE1 GLU 140 -1.637 85.949 -5.399 1.00 99.99 O ATOM 1072 OE2 GLU 140 -3.392 85.303 -6.602 1.00 99.99 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 52.66 62.5 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 58.84 59.7 62 100.0 62 ARMSMC BURIED . . . . . . . . 33.62 69.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.45 51.3 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 81.88 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 91.59 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 64.13 61.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.13 60.9 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 71.64 66.7 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 77.30 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 73.40 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 45.35 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 44.38 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 51.54 40.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 7.64 100.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 103.11 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 103.11 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 117.13 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 66.76 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.08 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.08 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0463 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.36 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.13 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.24 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.54 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.29 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.59 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 4.75 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.84 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.00 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.52 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.74 240 100.0 240 CRMSALL BURIED . . . . . . . . 2.96 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 98.444 0.970 0.971 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 98.186 0.965 0.966 32 100.0 32 ERRCA BURIED . . . . . . . . 99.078 0.982 0.982 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 98.324 0.968 0.969 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 98.044 0.962 0.963 156 100.0 156 ERRMC BURIED . . . . . . . . 98.996 0.980 0.981 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 96.630 0.937 0.940 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 96.555 0.935 0.939 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 96.199 0.929 0.932 112 100.0 112 ERRSC BURIED . . . . . . . . 97.539 0.954 0.956 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 97.552 0.954 0.956 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 97.233 0.947 0.950 240 100.0 240 ERRALL BURIED . . . . . . . . 98.281 0.967 0.969 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 20 38 39 43 45 45 45 DISTCA CA (P) 44.44 84.44 86.67 95.56 100.00 45 DISTCA CA (RMS) 0.71 1.08 1.14 1.72 2.08 DISTCA ALL (N) 110 218 262 302 332 345 345 DISTALL ALL (P) 31.88 63.19 75.94 87.54 96.23 345 DISTALL ALL (RMS) 0.74 1.12 1.44 1.96 2.80 DISTALL END of the results output