####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 352), selected 40 , name T0543TS295_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS295_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 70 - 88 4.95 12.37 LCS_AVERAGE: 44.06 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 88 - 95 1.86 11.93 LCS_AVERAGE: 15.50 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 75 - 80 0.96 14.26 LONGEST_CONTINUOUS_SEGMENT: 6 89 - 94 0.96 12.38 LONGEST_CONTINUOUS_SEGMENT: 6 90 - 95 0.95 12.47 LCS_AVERAGE: 11.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 3 3 16 0 3 4 4 5 6 8 9 12 14 17 22 22 26 28 30 31 33 36 37 LCS_GDT S 57 S 57 3 6 16 3 3 4 6 6 7 8 11 12 15 18 22 24 26 28 30 31 33 36 37 LCS_GDT C 58 C 58 5 6 16 3 4 5 6 6 7 8 9 11 15 18 23 24 26 28 30 31 33 36 37 LCS_GDT K 59 K 59 5 6 16 3 4 5 6 6 7 8 9 12 16 18 23 24 26 28 30 31 33 36 37 LCS_GDT G 60 G 60 5 6 16 3 4 5 6 6 7 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT R 61 R 61 5 6 16 3 4 5 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT C 62 C 62 5 6 16 3 4 5 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT F 63 F 63 4 6 16 3 4 6 8 10 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT E 64 E 64 4 6 17 3 4 4 5 10 10 11 11 14 15 17 19 23 26 28 30 31 33 36 37 LCS_GDT L 65 L 65 4 6 17 3 4 4 6 7 8 11 11 12 12 14 17 17 20 23 24 28 31 32 33 LCS_GDT Q 66 Q 66 4 6 17 3 4 6 8 10 10 11 11 14 15 16 19 22 25 28 30 31 33 36 37 LCS_GDT E 67 E 67 4 6 17 3 3 4 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT V 68 V 68 4 4 17 3 3 5 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT G 69 G 69 4 5 18 1 3 5 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT P 70 P 70 4 5 19 2 3 5 5 7 8 9 12 13 15 18 23 24 26 28 29 31 33 36 37 LCS_GDT P 71 P 71 4 5 19 0 3 5 5 7 8 9 11 12 13 14 15 18 20 23 28 29 31 36 37 LCS_GDT D 72 D 72 4 6 19 3 3 5 5 7 8 9 11 12 13 14 15 18 20 23 28 29 33 36 37 LCS_GDT C 73 C 73 4 6 19 3 4 5 5 6 8 9 11 12 13 14 15 18 20 23 28 29 33 36 37 LCS_GDT R 74 R 74 4 7 19 3 4 5 5 7 8 9 11 12 13 14 15 17 20 20 21 24 31 35 37 LCS_GDT C 75 C 75 6 7 19 3 4 6 6 7 7 9 11 12 13 15 16 18 20 20 21 25 31 35 37 LCS_GDT D 76 D 76 6 7 19 4 5 6 6 7 8 10 12 13 14 15 16 18 20 21 23 30 31 35 37 LCS_GDT N 77 N 77 6 7 19 4 5 6 6 7 8 10 12 13 14 15 16 19 25 28 30 31 33 36 37 LCS_GDT L 78 L 78 6 7 19 3 5 6 6 7 8 10 12 13 14 15 16 19 25 28 30 31 33 36 37 LCS_GDT C 79 C 79 6 7 19 5 5 6 6 7 7 9 12 13 14 15 16 18 23 28 30 31 33 36 37 LCS_GDT K 80 K 80 6 7 19 5 5 6 6 7 8 10 12 13 14 15 16 23 26 28 30 31 33 36 37 LCS_GDT S 81 S 81 5 5 19 5 5 5 5 5 7 9 12 13 14 16 18 23 26 28 30 31 33 36 37 LCS_GDT Y 82 Y 82 5 5 19 5 5 5 5 7 10 12 13 15 17 18 23 24 26 28 30 31 33 36 37 LCS_GDT S 83 S 83 5 5 19 5 5 5 6 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT S 84 S 84 3 5 19 3 3 4 5 6 10 12 14 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT C 85 C 85 4 5 19 3 3 4 5 7 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT C 86 C 86 4 5 19 3 3 4 6 7 9 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT H 87 H 87 4 5 19 3 4 4 6 7 9 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT D 88 D 88 4 8 19 3 4 4 6 7 8 11 15 16 17 17 18 21 25 26 30 31 33 36 37 LCS_GDT F 89 F 89 6 8 17 4 5 7 8 10 10 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT D 90 D 90 6 8 16 4 5 7 7 10 10 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT E 91 E 91 6 8 16 4 5 7 8 10 10 11 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT L 92 L 92 6 8 16 4 5 7 8 10 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT C 93 C 93 6 8 16 3 5 7 8 10 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 LCS_GDT L 94 L 94 6 8 16 3 4 7 8 10 10 11 15 16 18 18 23 24 25 26 29 31 33 36 37 LCS_GDT K 95 K 95 6 8 16 3 4 7 8 10 10 11 11 14 17 17 23 24 25 26 29 31 33 36 37 LCS_AVERAGE LCS_A: 23.83 ( 11.94 15.50 44.06 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 5 7 8 10 10 12 15 17 18 18 23 24 26 28 30 31 33 36 37 GDT PERCENT_AT 12.50 12.50 17.50 20.00 25.00 25.00 30.00 37.50 42.50 45.00 45.00 57.50 60.00 65.00 70.00 75.00 77.50 82.50 90.00 92.50 GDT RMS_LOCAL 0.16 0.16 1.10 1.29 1.50 1.50 2.57 3.01 3.30 3.52 3.50 4.40 4.55 5.15 5.61 5.78 5.93 6.15 6.66 6.92 GDT RMS_ALL_AT 22.13 22.13 12.60 13.12 13.11 13.11 8.16 10.22 8.64 8.75 8.46 8.36 8.29 7.73 7.75 7.73 7.50 7.52 7.37 7.31 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: D 76 D 76 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 15.136 0 0.300 0.300 15.541 0.000 0.000 LGA S 57 S 57 12.427 0 0.607 0.791 14.226 0.714 0.476 LGA C 58 C 58 9.356 0 0.262 0.262 12.510 6.429 4.286 LGA K 59 K 59 8.118 0 0.597 1.031 11.270 11.548 5.238 LGA G 60 G 60 3.454 0 0.222 0.222 5.339 37.738 37.738 LGA R 61 R 61 4.495 0 0.274 0.893 15.472 40.476 16.364 LGA C 62 C 62 2.940 0 0.642 0.544 6.327 49.405 41.032 LGA F 63 F 63 3.799 0 0.620 0.472 8.352 38.095 22.857 LGA E 64 E 64 7.562 0 0.047 1.257 8.186 11.667 9.259 LGA L 65 L 65 10.955 0 0.090 1.396 17.240 0.119 0.060 LGA Q 66 Q 66 9.527 0 0.593 1.283 14.499 7.738 3.439 LGA E 67 E 67 3.450 0 0.602 0.813 8.535 50.238 32.646 LGA V 68 V 68 2.508 0 0.615 0.668 5.001 51.548 53.061 LGA G 69 G 69 3.507 0 0.240 0.240 3.569 50.238 50.238 LGA P 70 P 70 6.986 0 0.013 0.237 9.020 22.024 15.102 LGA P 71 P 71 8.826 0 0.262 0.585 12.253 2.024 1.156 LGA D 72 D 72 11.521 3 0.650 0.627 11.777 0.119 0.060 LGA C 73 C 73 11.743 0 0.088 0.860 13.053 0.000 0.000 LGA R 74 R 74 13.511 0 0.139 0.728 19.965 0.000 0.000 LGA C 75 C 75 14.840 0 0.503 0.458 18.381 0.000 0.000 LGA D 76 D 76 17.556 0 0.230 0.881 18.302 0.000 0.000 LGA N 77 N 77 18.370 0 0.072 0.379 19.988 0.000 0.000 LGA L 78 L 78 19.317 0 0.216 1.255 23.117 0.000 0.000 LGA C 79 C 79 16.477 0 0.616 0.852 17.487 0.000 0.000 LGA K 80 K 80 17.515 0 0.031 1.035 22.906 0.000 0.000 LGA S 81 S 81 19.614 0 0.033 0.038 23.800 0.000 0.000 LGA Y 82 Y 82 13.141 0 0.212 1.269 15.455 0.000 0.317 LGA S 83 S 83 9.730 0 0.500 0.681 12.550 2.619 1.746 LGA S 84 S 84 9.255 0 0.196 0.191 12.420 4.762 3.175 LGA C 85 C 85 7.150 0 0.676 0.668 11.976 18.690 12.937 LGA C 86 C 86 1.844 0 0.178 0.854 5.285 61.429 51.508 LGA H 87 H 87 2.495 0 0.104 1.042 5.968 68.810 42.857 LGA D 88 D 88 4.095 0 0.086 1.218 9.208 42.619 25.119 LGA F 89 F 89 3.479 0 0.551 1.524 12.566 65.119 27.100 LGA D 90 D 90 1.331 0 0.083 0.197 2.514 72.976 67.917 LGA E 91 E 91 2.878 0 0.106 0.629 6.321 66.905 42.963 LGA L 92 L 92 1.248 0 0.179 1.329 2.709 79.286 73.333 LGA C 93 C 93 2.240 0 0.085 0.104 3.987 59.524 62.619 LGA L 94 L 94 3.930 0 0.393 0.520 7.043 34.167 37.321 LGA K 95 K 95 5.167 0 0.651 0.971 8.823 18.333 38.836 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 7.296 7.157 8.270 24.384 19.519 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 15 3.01 36.250 30.794 0.482 LGA_LOCAL RMSD: 3.012 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.215 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 7.296 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.044987 * X + 0.451828 * Y + -0.890970 * Z + 11.546618 Y_new = -0.159366 * X + 0.877205 * Y + 0.452894 * Z + 84.722794 Z_new = 0.986194 * X + 0.162365 * Y + 0.032543 * Z + -13.041802 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.845927 -1.404436 1.372987 [DEG: -105.7638 -80.4683 78.6664 ] ZXZ: -2.041074 1.538248 1.407622 [DEG: -116.9449 88.1351 80.6508 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS295_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS295_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 15 3.01 30.794 7.30 REMARK ---------------------------------------------------------- MOLECULE T0543TS295_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 971 H GLY 56 23.479 66.229 8.137 1.00 1.00 H ATOM 973 N GLY 56 23.809 66.656 8.898 1.00 1.00 N ATOM 975 CA GLY 56 25.013 67.464 8.795 1.00 1.00 C ATOM 977 C GLY 56 24.804 68.892 9.271 1.00 1.00 C ATOM 979 O GLY 56 25.708 69.494 9.855 1.00 1.00 O ATOM 981 H SER 57 23.035 69.017 8.418 1.00 1.00 H ATOM 983 N SER 57 23.656 69.475 8.947 1.00 1.00 N ATOM 985 CA SER 57 23.302 70.789 9.471 1.00 1.00 C ATOM 987 CB SER 57 22.244 71.456 8.590 1.00 1.00 C ATOM 989 C SER 57 22.783 70.686 10.901 1.00 1.00 C ATOM 991 O SER 57 23.089 71.533 11.744 1.00 1.00 O ATOM 993 OG SER 57 21.030 70.721 8.621 1.00 1.00 O ATOM 995 H CYS 58 22.023 68.897 10.599 1.00 1.00 H ATOM 997 N CYS 58 22.064 69.608 11.198 1.00 1.00 N ATOM 999 CA CYS 58 21.403 69.476 12.491 1.00 1.00 C ATOM 1001 CB CYS 58 20.573 68.189 12.543 1.00 1.00 C ATOM 1003 C CYS 58 22.421 69.476 13.624 1.00 1.00 C ATOM 1005 O CYS 58 22.228 70.152 14.637 1.00 1.00 O ATOM 1007 SG CYS 58 19.163 68.184 11.407 1.00 1.00 S ATOM 1009 H LYS 59 23.661 68.301 12.616 1.00 1.00 H ATOM 1011 N LYS 59 23.544 68.796 13.419 1.00 1.00 N ATOM 1013 CA LYS 59 24.590 68.780 14.434 1.00 1.00 C ATOM 1015 CB LYS 59 25.787 67.932 13.993 1.00 1.00 C ATOM 1017 C LYS 59 25.025 70.199 14.782 1.00 1.00 C ATOM 1019 O LYS 59 25.170 70.535 15.958 1.00 1.00 O ATOM 1021 CG LYS 59 26.411 68.359 12.674 1.00 1.00 C ATOM 1023 CD LYS 59 27.758 67.681 12.457 1.00 1.00 C ATOM 1025 CE LYS 59 28.262 67.872 11.032 1.00 1.00 C ATOM 1027 NZ LYS 59 28.350 69.317 10.666 1.00 1.00 N ATOM 1029 H GLY 60 24.983 70.779 12.902 1.00 1.00 H ATOM 1031 N GLY 60 25.154 71.056 13.775 1.00 1.00 N ATOM 1033 CA GLY 60 25.477 72.451 14.024 1.00 1.00 C ATOM 1035 C GLY 60 24.334 73.237 14.642 1.00 1.00 C ATOM 1037 O GLY 60 24.559 74.132 15.461 1.00 1.00 O ATOM 1039 H ARG 61 22.979 72.230 13.610 1.00 1.00 H ATOM 1041 N ARG 61 23.113 72.975 14.186 1.00 1.00 N ATOM 1043 CA ARG 61 21.957 73.753 14.618 1.00 1.00 C ATOM 1045 CB ARG 61 20.821 73.644 13.598 1.00 1.00 C ATOM 1047 C ARG 61 21.446 73.340 15.994 1.00 1.00 C ATOM 1049 O ARG 61 21.204 74.191 16.853 1.00 1.00 O ATOM 1051 CG ARG 61 21.074 74.404 12.305 1.00 1.00 C ATOM 1053 CD ARG 61 19.955 74.187 11.296 1.00 1.00 C ATOM 1055 NE ARG 61 18.681 74.711 11.782 1.00 1.00 N ATOM 1057 HE ARG 61 18.096 74.104 12.219 1.00 1.00 H ATOM 1059 CZ ARG 61 18.278 75.974 11.664 1.00 1.00 C ATOM 1061 NH1 ARG 61 19.051 76.873 11.065 1.00 1.00 H ATOM 1063 NH2 ARG 61 17.095 76.344 12.144 1.00 1.00 H ATOM 1065 H CYS 62 21.617 71.422 15.588 1.00 1.00 H ATOM 1067 N CYS 62 21.307 72.036 16.214 1.00 1.00 N ATOM 1069 CA CYS 62 20.651 71.548 17.423 1.00 1.00 C ATOM 1071 CB CYS 62 19.467 70.652 17.049 1.00 1.00 C ATOM 1073 C CYS 62 21.579 70.785 18.360 1.00 1.00 C ATOM 1075 O CYS 62 21.212 70.541 19.511 1.00 1.00 O ATOM 1077 SG CYS 62 18.231 71.465 16.006 1.00 1.00 S ATOM 1079 H PHE 63 23.097 70.758 17.077 1.00 1.00 H ATOM 1081 N PHE 63 22.790 70.460 17.921 1.00 1.00 N ATOM 1083 CA PHE 63 23.637 69.585 18.725 1.00 1.00 C ATOM 1085 CB PHE 63 23.855 68.235 18.029 1.00 1.00 C ATOM 1087 C PHE 63 24.966 70.223 19.113 1.00 1.00 C ATOM 1089 O PHE 63 25.316 71.307 18.641 1.00 1.00 O ATOM 1091 CG PHE 63 22.589 67.430 17.896 1.00 1.00 C ATOM 1093 CD1 PHE 63 21.819 67.509 16.741 1.00 1.00 C ATOM 1095 CE1 PHE 63 20.633 66.789 16.625 1.00 1.00 C ATOM 1097 CZ PHE 63 20.200 65.995 17.678 1.00 1.00 C ATOM 1099 CD2 PHE 63 22.159 66.611 18.934 1.00 1.00 C ATOM 1101 CE2 PHE 63 20.974 65.886 18.825 1.00 1.00 C ATOM 1103 H GLU 64 25.237 68.886 20.534 1.00 1.00 H ATOM 1105 N GLU 64 25.647 69.598 20.066 1.00 1.00 N ATOM 1107 CA GLU 64 26.993 70.012 20.444 1.00 1.00 C ATOM 1109 CB GLU 64 27.066 70.299 21.946 1.00 1.00 C ATOM 1111 C GLU 64 27.998 68.931 20.069 1.00 1.00 C ATOM 1113 O GLU 64 27.623 67.769 19.898 1.00 1.00 O ATOM 1115 CG GLU 64 26.123 71.410 22.383 1.00 1.00 C ATOM 1117 CD GLU 64 26.397 72.721 21.669 1.00 1.00 C ATOM 1119 OE1 GLU 64 27.529 73.240 21.782 1.00 1.00 O ATOM 1121 OE2 GLU 64 25.485 73.223 20.973 1.00 1.00 O ATOM 1123 H LEU 65 29.530 70.183 20.093 1.00 1.00 H ATOM 1125 N LEU 65 29.260 69.303 19.881 1.00 1.00 N ATOM 1127 CA LEU 65 30.247 68.340 19.408 1.00 1.00 C ATOM 1129 CB LEU 65 31.631 68.987 19.289 1.00 1.00 C ATOM 1131 C LEU 65 30.294 67.134 20.339 1.00 1.00 C ATOM 1133 O LEU 65 30.361 65.992 19.880 1.00 1.00 O ATOM 1135 CG LEU 65 32.724 68.129 18.645 1.00 1.00 C ATOM 1137 CD1 LEU 65 32.298 67.710 17.245 1.00 1.00 C ATOM 1139 CD2 LEU 65 34.032 68.906 18.590 1.00 1.00 C ATOM 1141 H GLN 66 30.049 68.257 21.928 1.00 1.00 H ATOM 1143 N GLN 66 30.144 67.375 21.637 1.00 1.00 N ATOM 1145 CA GLN 66 30.093 66.287 22.607 1.00 1.00 C ATOM 1147 CB GLN 66 29.848 66.854 24.008 1.00 1.00 C ATOM 1149 C GLN 66 28.968 65.321 22.252 1.00 1.00 C ATOM 1151 O GLN 66 29.175 64.107 22.198 1.00 1.00 O ATOM 1153 CG GLN 66 31.004 67.686 24.543 1.00 1.00 C ATOM 1155 CD GLN 66 30.684 68.356 25.867 1.00 1.00 C ATOM 1157 NE2 GLN 66 31.660 69.060 26.430 1.00 1.00 N ATOM 1159 HE21 GLN 66 32.491 69.111 25.986 1.00 1.00 H ATOM 1161 HE22 GLN 66 31.507 69.493 27.253 1.00 1.00 H ATOM 1163 OE1 GLN 66 29.561 68.259 26.371 1.00 1.00 O ATOM 1165 H GLU 67 27.728 66.809 21.883 1.00 1.00 H ATOM 1167 N GLU 67 27.800 65.868 21.922 1.00 1.00 N ATOM 1169 CA GLU 67 26.656 65.052 21.532 1.00 1.00 C ATOM 1171 CB GLU 67 25.409 65.927 21.382 1.00 1.00 C ATOM 1173 C GLU 67 26.935 64.324 20.223 1.00 1.00 C ATOM 1175 O GLU 67 26.540 63.169 20.049 1.00 1.00 O ATOM 1177 CG GLU 67 24.936 66.545 22.690 1.00 1.00 C ATOM 1179 CD GLU 67 23.695 67.406 22.531 1.00 1.00 C ATOM 1181 OE1 GLU 67 23.713 68.332 21.690 1.00 1.00 O ATOM 1183 OE2 GLU 67 22.696 67.152 23.240 1.00 1.00 O ATOM 1185 H VAL 68 27.997 65.832 19.534 1.00 1.00 H ATOM 1187 N VAL 68 27.656 64.983 19.324 1.00 1.00 N ATOM 1189 CA VAL 68 28.010 64.379 18.045 1.00 1.00 C ATOM 1191 CB VAL 68 28.753 65.382 17.133 1.00 1.00 C ATOM 1193 C VAL 68 28.883 63.154 18.296 1.00 1.00 C ATOM 1195 O VAL 68 28.816 62.172 17.553 1.00 1.00 O ATOM 1197 CG1 VAL 68 29.258 64.688 15.872 1.00 1.00 C ATOM 1199 CG2 VAL 68 27.841 66.548 16.766 1.00 1.00 C ATOM 1201 H GLY 69 29.753 63.991 19.851 1.00 1.00 H ATOM 1203 N GLY 69 29.733 63.227 19.317 1.00 1.00 N ATOM 1205 CA GLY 69 30.592 62.101 19.647 1.00 1.00 C ATOM 1207 C GLY 69 29.832 60.941 20.264 1.00 1.00 C ATOM 1209 O GLY 69 28.922 61.144 21.072 1.00 1.00 O ATOM 1211 N PRO 70 30.159 59.709 19.863 1.00 1.00 N ATOM 1213 CA PRO 70 29.506 58.506 20.382 1.00 1.00 C ATOM 1215 CB PRO 70 30.079 57.377 19.523 1.00 1.00 C ATOM 1217 C PRO 70 29.803 58.268 21.857 1.00 1.00 C ATOM 1219 O PRO 70 30.884 58.609 22.344 1.00 1.00 O ATOM 1221 CG PRO 70 30.562 58.068 18.282 1.00 1.00 C ATOM 1223 CD PRO 70 31.121 59.375 18.797 1.00 1.00 C ATOM 1225 N PRO 71 28.872 57.643 22.583 1.00 1.00 N ATOM 1227 CA PRO 71 29.073 57.360 24.004 1.00 1.00 C ATOM 1229 CB PRO 71 27.828 56.559 24.388 1.00 1.00 C ATOM 1231 C PRO 71 30.344 56.554 24.243 1.00 1.00 C ATOM 1233 O PRO 71 30.963 56.654 25.305 1.00 1.00 O ATOM 1235 CG PRO 71 26.784 57.046 23.428 1.00 1.00 C ATOM 1237 CD PRO 71 27.535 57.216 22.126 1.00 1.00 C ATOM 1239 H ASP 72 30.250 55.753 22.445 1.00 1.00 H ATOM 1241 N ASP 72 30.756 55.787 23.240 1.00 1.00 N ATOM 1243 CA ASP 72 31.976 54.992 23.331 1.00 1.00 C ATOM 1245 CB ASP 72 32.150 54.142 22.069 1.00 1.00 C ATOM 1247 C ASP 72 33.196 55.886 23.521 1.00 1.00 C ATOM 1249 O ASP 72 34.130 55.524 24.240 1.00 1.00 O ATOM 1251 CG ASP 72 31.156 52.998 21.986 1.00 1.00 C ATOM 1253 OD1 ASP 72 30.475 52.720 22.998 1.00 1.00 O ATOM 1255 OD2 ASP 72 31.044 52.376 20.907 1.00 1.00 O ATOM 1257 H CYS 73 32.422 57.330 22.433 1.00 1.00 H ATOM 1259 N CYS 73 33.178 57.064 22.906 1.00 1.00 N ATOM 1261 CA CYS 73 34.311 57.977 23.002 1.00 1.00 C ATOM 1263 CB CYS 73 34.059 59.222 22.145 1.00 1.00 C ATOM 1265 C CYS 73 34.522 58.399 24.450 1.00 1.00 C ATOM 1267 O CYS 73 33.554 58.651 25.172 1.00 1.00 O ATOM 1269 SG CYS 73 34.100 58.902 20.364 1.00 1.00 S ATOM 1271 H ARG 74 36.491 58.259 24.286 1.00 1.00 H ATOM 1273 N ARG 74 35.774 58.428 24.891 1.00 1.00 N ATOM 1275 CA ARG 74 36.065 58.754 26.283 1.00 1.00 C ATOM 1277 CB ARG 74 37.555 58.566 26.582 1.00 1.00 C ATOM 1279 C ARG 74 35.655 60.192 26.575 1.00 1.00 C ATOM 1281 O ARG 74 36.129 61.126 25.924 1.00 1.00 O ATOM 1283 CG ARG 74 37.926 58.824 28.034 1.00 1.00 C ATOM 1285 CD ARG 74 39.396 58.526 28.298 1.00 1.00 C ATOM 1287 NE ARG 74 39.751 58.750 29.697 1.00 1.00 N ATOM 1289 HE ARG 74 39.053 58.998 30.292 1.00 1.00 H ATOM 1291 CZ ARG 74 40.976 58.627 30.198 1.00 1.00 C ATOM 1293 NH1 ARG 74 41.988 58.276 29.412 1.00 1.00 H ATOM 1295 NH2 ARG 74 41.194 58.853 31.490 1.00 1.00 H ATOM 1297 H CYS 75 34.396 59.622 27.973 1.00 1.00 H ATOM 1299 N CYS 75 34.745 60.363 27.530 1.00 1.00 N ATOM 1301 CA CYS 75 34.228 61.687 27.852 1.00 1.00 C ATOM 1303 CB CYS 75 32.702 61.702 27.726 1.00 1.00 C ATOM 1305 C CYS 75 34.624 62.089 29.266 1.00 1.00 C ATOM 1307 O CYS 75 34.378 61.347 30.219 1.00 1.00 O ATOM 1309 SG CYS 75 32.103 61.393 26.047 1.00 1.00 S ATOM 1311 H ASP 76 35.494 63.742 28.630 1.00 1.00 H ATOM 1313 N ASP 76 35.266 63.244 29.398 1.00 1.00 N ATOM 1315 CA ASP 76 35.649 63.749 30.712 1.00 1.00 C ATOM 1317 CB ASP 76 37.130 63.491 30.993 1.00 1.00 C ATOM 1319 C ASP 76 35.334 65.232 30.868 1.00 1.00 C ATOM 1321 O ASP 76 35.957 66.078 30.223 1.00 1.00 O ATOM 1323 CG ASP 76 37.597 64.163 32.271 1.00 1.00 C ATOM 1325 OD1 ASP 76 36.889 64.066 33.297 1.00 1.00 O ATOM 1327 OD2 ASP 76 38.665 64.811 32.247 1.00 1.00 O ATOM 1329 H ASN 77 34.063 64.873 32.324 1.00 1.00 H ATOM 1331 N ASN 77 34.433 65.553 31.790 1.00 1.00 N ATOM 1333 CA ASN 77 34.053 66.939 32.037 1.00 1.00 C ATOM 1335 CB ASN 77 32.988 67.008 33.135 1.00 1.00 C ATOM 1337 C ASN 77 35.271 67.764 32.435 1.00 1.00 C ATOM 1339 O ASN 77 35.395 68.927 32.045 1.00 1.00 O ATOM 1341 CG ASN 77 31.634 66.519 32.659 1.00 1.00 C ATOM 1343 ND2 ASN 77 30.768 66.153 33.597 1.00 1.00 N ATOM 1345 HD21 ASN 77 31.030 66.213 34.500 1.00 1.00 H ATOM 1347 HD22 ASN 77 29.915 65.841 33.346 1.00 1.00 H ATOM 1349 OD1 ASN 77 31.368 66.466 31.456 1.00 1.00 O ATOM 1351 H LEU 78 36.075 66.236 33.391 1.00 1.00 H ATOM 1353 N LEU 78 36.195 67.146 33.163 1.00 1.00 N ATOM 1355 CA LEU 78 37.411 67.830 33.587 1.00 1.00 C ATOM 1357 CB LEU 78 38.214 66.952 34.553 1.00 1.00 C ATOM 1359 C LEU 78 38.270 68.217 32.388 1.00 1.00 C ATOM 1361 O LEU 78 38.924 69.262 32.399 1.00 1.00 O ATOM 1363 CG LEU 78 37.553 66.648 35.900 1.00 1.00 C ATOM 1365 CD1 LEU 78 38.409 65.672 36.696 1.00 1.00 C ATOM 1367 CD2 LEU 78 37.344 67.938 36.683 1.00 1.00 C ATOM 1369 H CYS 79 37.718 66.636 31.361 1.00 1.00 H ATOM 1371 N CYS 79 38.255 67.396 31.341 1.00 1.00 N ATOM 1373 CA CYS 79 39.124 67.622 30.191 1.00 1.00 C ATOM 1375 CB CYS 79 39.055 66.432 29.229 1.00 1.00 C ATOM 1377 C CYS 79 38.747 68.898 29.451 1.00 1.00 C ATOM 1379 O CYS 79 37.632 69.028 28.940 1.00 1.00 O ATOM 1381 SG CYS 79 40.104 66.617 27.765 1.00 1.00 S ATOM 1383 H LYS 80 40.575 69.615 29.682 1.00 1.00 H ATOM 1385 N LYS 80 39.716 69.801 29.323 1.00 1.00 N ATOM 1387 CA LYS 80 39.478 71.098 28.701 1.00 1.00 C ATOM 1389 CB LYS 80 40.734 71.967 28.796 1.00 1.00 C ATOM 1391 C LYS 80 39.075 70.931 27.240 1.00 1.00 C ATOM 1393 O LYS 80 38.106 71.541 26.781 1.00 1.00 O ATOM 1395 CG LYS 80 41.031 72.468 30.201 1.00 1.00 C ATOM 1397 CD LYS 80 42.210 73.431 30.209 1.00 1.00 C ATOM 1399 CE LYS 80 43.531 72.702 30.001 1.00 1.00 C ATOM 1401 NZ LYS 80 44.697 73.628 30.096 1.00 1.00 N ATOM 1403 H SER 81 40.451 69.557 26.920 1.00 1.00 H ATOM 1405 N SER 81 39.761 70.047 26.524 1.00 1.00 N ATOM 1407 CA SER 81 39.436 69.805 25.123 1.00 1.00 C ATOM 1409 CB SER 81 40.398 68.773 24.529 1.00 1.00 C ATOM 1411 C SER 81 38.002 69.306 24.993 1.00 1.00 C ATOM 1413 O SER 81 37.235 69.801 24.162 1.00 1.00 O ATOM 1415 OG SER 81 41.719 69.287 24.490 1.00 1.00 O ATOM 1417 H TYR 82 38.199 68.117 26.556 1.00 1.00 H ATOM 1419 N TYR 82 37.605 68.400 25.879 1.00 1.00 N ATOM 1421 CA TYR 82 36.239 67.892 25.872 1.00 1.00 C ATOM 1423 CB TYR 82 36.063 66.791 26.924 1.00 1.00 C ATOM 1425 C TYR 82 35.253 69.024 26.133 1.00 1.00 C ATOM 1427 O TYR 82 34.255 69.160 25.424 1.00 1.00 O ATOM 1429 CG TYR 82 34.651 66.257 27.006 1.00 1.00 C ATOM 1431 CD1 TYR 82 34.160 65.385 26.036 1.00 1.00 C ATOM 1433 CE1 TYR 82 32.855 64.907 26.094 1.00 1.00 C ATOM 1435 CZ TYR 82 32.036 65.289 27.142 1.00 1.00 C ATOM 1437 CD2 TYR 82 33.805 66.627 28.049 1.00 1.00 C ATOM 1439 CE2 TYR 82 32.504 66.139 28.127 1.00 1.00 C ATOM 1441 OH TYR 82 30.742 64.818 27.204 1.00 1.00 H ATOM 1443 H SER 83 36.392 69.822 27.530 1.00 1.00 H ATOM 1445 N SER 83 35.568 69.883 27.094 1.00 1.00 N ATOM 1447 CA SER 83 34.673 70.987 27.422 1.00 1.00 C ATOM 1449 CB SER 83 35.155 71.726 28.674 1.00 1.00 C ATOM 1451 C SER 83 34.562 71.957 26.252 1.00 1.00 C ATOM 1453 O SER 83 33.478 72.473 25.967 1.00 1.00 O ATOM 1455 OG SER 83 36.371 72.410 28.419 1.00 1.00 O ATOM 1457 H SER 84 36.432 71.651 25.701 1.00 1.00 H ATOM 1459 N SER 84 35.659 72.147 25.524 1.00 1.00 N ATOM 1461 CA SER 84 35.663 73.076 24.400 1.00 1.00 C ATOM 1463 CB SER 84 37.074 73.248 23.832 1.00 1.00 C ATOM 1465 C SER 84 34.713 72.596 23.308 1.00 1.00 C ATOM 1467 O SER 84 34.205 73.399 22.522 1.00 1.00 O ATOM 1469 OG SER 84 37.506 72.063 23.186 1.00 1.00 O ATOM 1471 H CYS 85 34.814 70.728 23.918 1.00 1.00 H ATOM 1473 N CYS 85 34.430 71.298 23.290 1.00 1.00 N ATOM 1475 CA CYS 85 33.494 70.746 22.316 1.00 1.00 C ATOM 1477 CB CYS 85 33.419 69.222 22.448 1.00 1.00 C ATOM 1479 C CYS 85 32.105 71.351 22.483 1.00 1.00 C ATOM 1481 O CYS 85 31.299 71.328 21.549 1.00 1.00 O ATOM 1483 SG CYS 85 34.982 68.379 22.098 1.00 1.00 S ATOM 1485 H CYS 86 32.395 71.712 24.395 1.00 1.00 H ATOM 1487 N CYS 86 31.799 71.824 23.689 1.00 1.00 N ATOM 1489 CA CYS 86 30.526 72.494 23.931 1.00 1.00 C ATOM 1491 CB CYS 86 30.077 72.282 25.380 1.00 1.00 C ATOM 1493 C CYS 86 30.628 73.986 23.637 1.00 1.00 C ATOM 1495 O CYS 86 31.333 74.716 24.337 1.00 1.00 O ATOM 1497 SG CYS 86 28.444 72.973 25.742 1.00 1.00 S ATOM 1499 H HIS 87 29.218 73.885 22.262 1.00 1.00 H ATOM 1501 N HIS 87 29.861 74.456 22.657 1.00 1.00 N ATOM 1503 CA HIS 87 29.965 75.836 22.196 1.00 1.00 C ATOM 1505 CB HIS 87 29.068 76.034 20.968 1.00 1.00 C ATOM 1507 C HIS 87 29.533 76.809 23.285 1.00 1.00 C ATOM 1509 O HIS 87 30.253 77.759 23.601 1.00 1.00 O ATOM 1511 CG HIS 87 29.513 75.243 19.778 1.00 1.00 C ATOM 1513 ND1 HIS 87 29.180 73.918 19.598 1.00 1.00 N ATOM 1515 HD1 HIS 87 28.666 73.385 20.194 1.00 1.00 H ATOM 1517 CE1 HIS 87 29.727 73.481 18.476 1.00 1.00 C ATOM 1519 NE2 HIS 87 30.371 74.486 17.906 1.00 1.00 N ATOM 1521 HE2 HIS 87 30.818 74.438 17.068 1.00 1.00 H ATOM 1523 CD2 HIS 87 30.240 75.603 18.691 1.00 1.00 C ATOM 1525 H ASP 88 27.956 75.716 23.733 1.00 1.00 H ATOM 1527 N ASP 88 28.396 76.530 23.913 1.00 1.00 N ATOM 1529 CA ASP 88 27.826 77.442 24.898 1.00 1.00 C ATOM 1531 CB ASP 88 28.827 77.666 26.034 1.00 1.00 C ATOM 1533 C ASP 88 27.437 78.771 24.257 1.00 1.00 C ATOM 1535 O ASP 88 27.590 79.830 24.867 1.00 1.00 O ATOM 1537 CG ASP 88 29.116 76.388 26.799 1.00 1.00 C ATOM 1539 OD1 ASP 88 28.155 75.744 27.272 1.00 1.00 O ATOM 1541 OD2 ASP 88 30.303 76.008 26.910 1.00 1.00 O ATOM 1543 H PHE 89 27.037 77.899 22.531 1.00 1.00 H ATOM 1545 N PHE 89 26.989 78.716 23.006 1.00 1.00 N ATOM 1547 CA PHE 89 26.445 79.892 22.335 1.00 1.00 C ATOM 1549 CB PHE 89 27.349 80.330 21.175 1.00 1.00 C ATOM 1551 C PHE 89 25.045 79.593 21.809 1.00 1.00 C ATOM 1553 O PHE 89 24.880 79.214 20.647 1.00 1.00 O ATOM 1555 CG PHE 89 28.744 80.714 21.593 1.00 1.00 C ATOM 1557 CD1 PHE 89 29.813 79.853 21.365 1.00 1.00 C ATOM 1559 CE1 PHE 89 31.104 80.202 21.753 1.00 1.00 C ATOM 1561 CZ PHE 89 31.330 81.415 22.390 1.00 1.00 C ATOM 1563 CD2 PHE 89 28.985 81.927 22.226 1.00 1.00 C ATOM 1565 CE2 PHE 89 30.271 82.280 22.627 1.00 1.00 C ATOM 1567 H ASP 90 24.207 80.296 23.448 1.00 1.00 H ATOM 1569 N ASP 90 24.037 79.855 22.633 1.00 1.00 N ATOM 1571 CA ASP 90 22.668 79.477 22.303 1.00 1.00 C ATOM 1573 CB ASP 90 21.730 79.947 23.421 1.00 1.00 C ATOM 1575 C ASP 90 22.236 80.115 20.989 1.00 1.00 C ATOM 1577 O ASP 90 21.820 79.421 20.058 1.00 1.00 O ATOM 1579 CG ASP 90 21.990 79.252 24.744 1.00 1.00 C ATOM 1581 OD1 ASP 90 23.101 79.407 25.295 1.00 1.00 O ATOM 1583 OD2 ASP 90 21.078 78.563 25.247 1.00 1.00 O ATOM 1585 H GLU 91 22.855 81.901 21.571 1.00 1.00 H ATOM 1587 N GLU 91 22.427 81.425 20.874 1.00 1.00 N ATOM 1589 CA GLU 91 21.980 82.146 19.690 1.00 1.00 C ATOM 1591 CB GLU 91 22.231 83.647 19.853 1.00 1.00 C ATOM 1593 C GLU 91 22.702 81.628 18.453 1.00 1.00 C ATOM 1595 O GLU 91 22.071 81.346 17.433 1.00 1.00 O ATOM 1597 CG GLU 91 21.357 84.303 20.911 1.00 1.00 C ATOM 1599 CD GLU 91 21.606 85.794 21.054 1.00 1.00 C ATOM 1601 OE1 GLU 91 22.782 86.193 21.207 1.00 1.00 O ATOM 1603 OE2 GLU 91 20.626 86.571 21.016 1.00 1.00 O ATOM 1605 H LEU 92 24.422 81.486 19.417 1.00 1.00 H ATOM 1607 N LEU 92 24.008 81.408 18.571 1.00 1.00 N ATOM 1609 CA LEU 92 24.799 80.968 17.428 1.00 1.00 C ATOM 1611 CB LEU 92 26.275 80.850 17.822 1.00 1.00 C ATOM 1613 C LEU 92 24.290 79.619 16.934 1.00 1.00 C ATOM 1615 O LEU 92 24.053 79.436 15.737 1.00 1.00 O ATOM 1617 CG LEU 92 27.234 80.356 16.735 1.00 1.00 C ATOM 1619 CD1 LEU 92 27.240 81.325 15.561 1.00 1.00 C ATOM 1621 CD2 LEU 92 28.637 80.199 17.307 1.00 1.00 C ATOM 1623 H CYS 93 24.120 78.919 18.763 1.00 1.00 H ATOM 1625 N CYS 93 24.025 78.706 17.862 1.00 1.00 N ATOM 1627 CA CYS 93 23.512 77.394 17.486 1.00 1.00 C ATOM 1629 CB CYS 93 23.340 76.518 18.730 1.00 1.00 C ATOM 1631 C CYS 93 22.173 77.547 16.777 1.00 1.00 C ATOM 1633 O CYS 93 21.962 76.980 15.703 1.00 1.00 O ATOM 1635 SG CYS 93 24.905 76.043 19.506 1.00 1.00 S ATOM 1637 H LEU 94 21.580 78.913 18.069 1.00 1.00 H ATOM 1639 N LEU 94 21.309 78.391 17.329 1.00 1.00 N ATOM 1641 CA LEU 94 19.979 78.592 16.767 1.00 1.00 C ATOM 1643 CB LEU 94 19.157 79.507 17.682 1.00 1.00 C ATOM 1645 C LEU 94 20.082 79.202 15.373 1.00 1.00 C ATOM 1647 O LEU 94 19.322 78.843 14.472 1.00 1.00 O ATOM 1649 CG LEU 94 18.770 78.924 19.044 1.00 1.00 C ATOM 1651 CD1 LEU 94 18.150 80.003 19.922 1.00 1.00 C ATOM 1653 CD2 LEU 94 17.805 77.761 18.864 1.00 1.00 C ATOM 1655 H LYS 95 21.698 80.212 15.877 1.00 1.00 H ATOM 1657 N LYS 95 21.058 80.084 15.188 1.00 1.00 N ATOM 1659 CA LYS 95 21.202 80.825 13.939 1.00 1.00 C ATOM 1661 CB LYS 95 21.860 82.183 14.194 1.00 1.00 C ATOM 1663 C LYS 95 21.996 80.039 12.899 1.00 1.00 C ATOM 1665 O LYS 95 22.119 80.477 11.753 1.00 1.00 O ATOM 1667 CG LYS 95 21.004 83.125 15.027 1.00 1.00 C ATOM 1669 CD LYS 95 21.720 84.439 15.302 1.00 1.00 C ATOM 1671 CE LYS 95 20.864 85.375 16.146 1.00 1.00 C ATOM 1673 NZ LYS 95 21.579 86.647 16.462 1.00 1.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 79.21 44.9 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 79.83 46.4 56 100.0 56 ARMSMC BURIED . . . . . . . . 77.58 40.9 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 48.45 50.0 2 5.6 36 ARMSSC1 RELIABLE SIDE CHAINS . 48.45 50.0 2 5.7 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 48.45 50.0 2 8.0 25 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.57 0.0 2 8.7 23 ARMSSC2 RELIABLE SIDE CHAINS . 57.57 0.0 2 11.8 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 57.57 0.0 2 11.1 18 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.30 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.30 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.1824 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 6.93 29 100.0 29 CRMSCA BURIED . . . . . . . . 8.19 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.41 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 7.11 142 100.0 142 CRMSMC BURIED . . . . . . . . 8.13 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 9.41 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 9.32 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 9.41 103 100.0 103 CRMSSC BURIED . . . . . . . . 9.40 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.30 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 8.15 219 100.0 219 CRMSALL BURIED . . . . . . . . 8.66 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.872 0.708 0.354 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 5.498 0.689 0.344 29 100.0 29 ERRCA BURIED . . . . . . . . 6.859 0.758 0.379 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.949 0.713 0.357 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 5.653 0.700 0.350 142 100.0 142 ERRMC BURIED . . . . . . . . 6.713 0.747 0.374 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.856 0.767 0.383 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 7.812 0.765 0.383 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 7.786 0.761 0.381 103 100.0 103 ERRSC BURIED . . . . . . . . 8.035 0.781 0.390 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.726 0.735 0.368 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 6.531 0.725 0.363 219 100.0 219 ERRALL BURIED . . . . . . . . 7.236 0.760 0.380 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 9 36 40 40 DISTCA CA (P) 0.00 2.50 5.00 22.50 90.00 40 DISTCA CA (RMS) 0.00 1.01 1.78 3.68 6.73 DISTCA ALL (N) 1 4 14 60 232 303 303 DISTALL ALL (P) 0.33 1.32 4.62 19.80 76.57 303 DISTALL ALL (RMS) 0.96 1.36 2.34 3.85 6.79 DISTALL END of the results output