####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS291_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS291_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 111 - 131 4.99 18.57 LCS_AVERAGE: 42.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 99 - 107 1.71 15.35 LONGEST_CONTINUOUS_SEGMENT: 9 100 - 108 1.83 13.63 LCS_AVERAGE: 15.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 102 - 107 0.58 15.42 LONGEST_CONTINUOUS_SEGMENT: 6 110 - 115 0.68 17.95 LCS_AVERAGE: 9.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 5 16 0 3 4 4 7 7 7 7 7 7 9 17 22 25 27 29 31 31 32 33 LCS_GDT A 97 A 97 4 8 16 3 4 4 6 8 9 9 10 11 13 14 17 19 24 27 29 31 31 32 33 LCS_GDT R 98 R 98 4 8 16 3 4 4 4 7 8 8 10 11 13 14 17 22 25 27 29 31 31 32 33 LCS_GDT G 99 G 99 4 9 16 3 4 7 7 8 9 11 12 15 16 18 19 22 25 27 29 31 31 32 33 LCS_GDT W 100 W 100 4 9 16 3 4 6 7 9 11 12 13 14 14 18 19 22 25 27 29 31 31 32 33 LCS_GDT E 101 E 101 4 9 18 3 4 5 7 9 11 12 14 15 16 18 19 22 25 27 29 31 31 32 33 LCS_GDT C 102 C 102 6 9 18 4 6 7 7 9 11 12 14 15 16 19 21 22 25 27 29 31 31 32 33 LCS_GDT T 103 T 103 6 9 18 4 6 7 7 9 11 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT K 104 K 104 6 9 18 4 6 7 7 8 11 12 13 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT D 105 D 105 6 9 18 4 6 7 7 9 11 12 14 15 16 19 21 22 25 27 29 31 31 32 33 LCS_GDT R 106 R 106 6 9 18 4 6 7 7 9 11 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT C 107 C 107 6 9 18 4 6 7 7 8 10 12 13 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT G 108 G 108 3 9 18 3 3 5 7 9 11 12 14 15 16 18 21 22 25 27 29 31 31 32 33 LCS_GDT E 109 E 109 3 6 18 3 3 6 7 9 11 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT V 110 V 110 6 8 20 3 6 8 8 9 11 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT R 111 R 111 6 8 21 3 6 8 8 9 9 12 14 17 17 19 21 22 24 26 28 31 31 32 33 LCS_GDT N 112 N 112 6 8 21 3 6 8 8 9 9 10 12 17 17 19 21 22 23 25 26 28 31 31 32 LCS_GDT E 113 E 113 6 8 21 3 6 8 8 9 9 10 12 17 17 19 21 22 23 24 26 28 31 31 32 LCS_GDT E 114 E 114 6 8 21 3 6 8 8 9 9 10 12 17 17 19 21 22 23 24 26 27 28 31 32 LCS_GDT N 115 N 115 6 8 21 3 6 8 8 9 9 10 12 17 17 19 21 22 23 24 26 28 31 31 32 LCS_GDT A 116 A 116 4 8 21 3 4 5 7 9 9 10 12 17 17 19 21 22 23 24 26 28 31 31 32 LCS_GDT C 117 C 117 4 8 21 3 4 8 8 9 9 10 12 13 16 19 21 22 23 25 26 28 31 31 32 LCS_GDT H 118 H 118 4 7 21 3 4 4 6 7 8 10 11 12 14 16 18 21 23 25 26 29 31 32 33 LCS_GDT C 119 C 119 4 7 21 3 4 4 6 7 8 9 11 12 14 15 17 18 20 21 22 22 30 31 33 LCS_GDT S 120 S 120 3 7 21 3 3 4 6 7 8 9 10 11 13 15 16 18 20 21 22 29 30 31 33 LCS_GDT E 121 E 121 4 7 21 3 3 5 6 7 8 10 11 12 14 15 17 18 20 21 22 26 28 29 29 LCS_GDT D 122 D 122 4 7 21 3 3 5 6 7 9 10 11 13 14 15 17 19 21 24 28 31 31 32 33 LCS_GDT C 123 C 123 4 6 21 3 3 5 7 9 11 12 13 14 14 15 17 20 25 27 29 31 31 32 33 LCS_GDT L 124 L 124 4 5 21 3 3 5 5 5 11 12 13 14 14 15 17 22 25 27 29 31 31 32 33 LCS_GDT S 125 S 125 4 5 21 3 3 5 5 5 7 9 12 12 12 14 18 22 25 27 29 31 31 32 33 LCS_GDT R 126 R 126 4 6 21 3 3 4 5 6 8 10 12 12 14 15 17 18 24 25 29 31 31 32 32 LCS_GDT G 127 G 127 4 6 21 3 3 4 5 7 8 10 12 12 13 15 19 22 25 27 29 31 31 32 33 LCS_GDT D 128 D 128 4 6 21 3 4 8 8 9 9 12 14 15 16 18 19 22 25 27 29 31 31 32 33 LCS_GDT C 129 C 129 4 6 21 3 4 4 5 7 9 12 14 15 16 18 19 22 25 27 29 31 31 32 33 LCS_GDT C 130 C 130 4 6 21 3 4 6 7 9 9 12 14 15 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT T 131 T 131 4 6 21 3 4 4 5 7 9 10 13 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT N 132 N 132 4 6 19 3 4 4 5 7 9 10 12 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT Y 133 Y 133 3 6 19 1 4 6 7 9 9 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT Q 134 Q 134 3 5 19 3 4 6 7 9 9 12 14 17 17 19 21 22 25 27 29 31 31 32 33 LCS_GDT V 135 V 135 3 4 19 3 3 4 4 9 9 10 14 17 17 18 20 22 25 27 29 31 31 32 33 LCS_GDT V 136 V 136 3 4 19 3 3 4 4 4 8 9 12 12 12 17 17 20 24 25 29 31 31 32 33 LCS_GDT C 137 C 137 4 4 17 3 4 4 4 4 4 5 6 8 10 13 14 14 17 23 25 27 31 31 32 LCS_GDT K 138 K 138 4 4 16 3 4 4 4 4 4 5 5 8 10 15 16 20 23 24 26 28 31 31 32 LCS_GDT G 139 G 139 4 4 16 3 4 4 4 4 4 5 5 5 11 15 16 20 23 24 26 28 31 31 32 LCS_GDT E 140 E 140 4 4 15 3 4 4 4 4 4 5 5 5 5 5 8 9 12 19 19 24 26 26 30 LCS_AVERAGE LCS_A: 22.52 ( 9.73 15.26 42.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 8 8 9 11 12 14 17 17 19 21 22 25 27 29 31 31 32 33 GDT PERCENT_AT 8.89 13.33 17.78 17.78 20.00 24.44 26.67 31.11 37.78 37.78 42.22 46.67 48.89 55.56 60.00 64.44 68.89 68.89 71.11 73.33 GDT RMS_LOCAL 0.24 0.58 0.99 0.99 1.24 2.04 2.18 2.98 3.42 3.42 3.88 4.08 4.44 5.30 5.50 5.72 5.93 5.93 6.08 6.37 GDT RMS_ALL_AT 15.30 15.42 17.78 17.78 17.64 12.26 12.35 9.55 12.54 12.54 11.80 11.90 9.56 10.23 10.61 10.49 10.52 10.52 10.45 10.59 # Checking swapping # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # possible swapping detected: Y 133 Y 133 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 13.619 0 0.101 0.129 15.000 0.000 0.000 LGA A 97 A 97 15.382 0 0.606 0.543 17.621 0.000 0.000 LGA R 98 R 98 11.327 0 0.062 1.270 16.511 1.071 0.390 LGA G 99 G 99 7.118 0 0.066 0.066 9.286 5.833 5.833 LGA W 100 W 100 7.930 0 0.622 0.374 14.726 10.119 3.571 LGA E 101 E 101 5.649 0 0.041 0.960 10.016 28.214 16.402 LGA C 102 C 102 3.610 0 0.551 1.045 5.513 42.024 35.952 LGA T 103 T 103 3.073 0 0.054 0.155 3.752 54.048 53.333 LGA K 104 K 104 6.167 0 0.020 0.710 11.570 26.548 12.910 LGA D 105 D 105 3.514 0 0.141 1.126 8.111 58.690 37.679 LGA R 106 R 106 2.214 0 0.212 1.033 9.378 58.333 39.394 LGA C 107 C 107 5.765 0 0.150 0.683 10.181 26.548 18.175 LGA G 108 G 108 4.627 0 0.192 0.192 4.875 42.500 42.500 LGA E 109 E 109 1.806 0 0.643 1.275 8.695 73.333 44.921 LGA V 110 V 110 1.355 0 0.583 1.394 4.197 73.214 64.558 LGA R 111 R 111 2.464 0 0.106 1.067 9.413 45.595 29.177 LGA N 112 N 112 8.182 0 0.029 1.334 11.298 6.786 4.226 LGA E 113 E 113 12.409 0 0.083 1.251 15.184 0.000 0.000 LGA E 114 E 114 16.367 0 0.089 1.012 20.998 0.000 0.000 LGA N 115 N 115 13.199 0 0.066 0.380 15.305 0.000 0.000 LGA A 116 A 116 12.023 0 0.601 0.598 13.996 0.000 0.000 LGA C 117 C 117 7.703 0 0.125 0.683 12.017 11.071 7.619 LGA H 118 H 118 6.896 0 0.087 1.126 10.499 7.381 14.762 LGA C 119 C 119 11.810 0 0.669 0.881 13.251 0.357 0.238 LGA S 120 S 120 13.820 0 0.497 0.497 16.081 0.000 0.000 LGA E 121 E 121 17.418 0 0.657 1.410 24.472 0.000 0.000 LGA D 122 D 122 15.524 0 0.115 1.168 16.058 0.000 0.000 LGA C 123 C 123 13.330 0 0.192 0.722 17.050 0.000 0.000 LGA L 124 L 124 13.570 0 0.610 1.413 15.084 0.000 0.000 LGA S 125 S 125 11.629 0 0.694 0.798 12.030 0.000 0.794 LGA R 126 R 126 11.197 0 0.148 1.497 15.717 0.119 0.043 LGA G 127 G 127 7.394 0 0.212 0.212 8.734 15.119 15.119 LGA D 128 D 128 2.992 0 0.156 1.240 4.845 54.524 56.845 LGA C 129 C 129 3.972 0 0.548 0.668 8.777 54.048 40.079 LGA C 130 C 130 1.926 0 0.039 0.795 4.413 64.167 58.492 LGA T 131 T 131 5.822 0 0.142 1.124 8.379 19.762 14.558 LGA N 132 N 132 6.978 0 0.720 0.953 11.608 24.762 13.333 LGA Y 133 Y 133 2.431 0 0.588 1.150 10.347 55.952 32.540 LGA Q 134 Q 134 2.219 0 0.653 0.766 3.238 66.786 60.688 LGA V 135 V 135 3.630 0 0.599 0.603 7.972 43.333 30.680 LGA V 136 V 136 6.797 0 0.046 0.065 10.440 12.738 10.204 LGA C 137 C 137 10.652 0 0.703 1.023 14.291 0.714 0.476 LGA K 138 K 138 11.701 0 0.188 0.853 15.433 0.000 0.000 LGA G 139 G 139 11.547 0 0.130 0.130 13.297 0.000 0.000 LGA E 140 E 140 15.358 0 0.663 1.073 20.887 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 9.368 9.231 10.279 21.860 17.011 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 14 2.98 31.667 27.431 0.454 LGA_LOCAL RMSD: 2.985 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.553 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 9.368 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.033504 * X + -0.791809 * Y + 0.609849 * Z + -309.290497 Y_new = -0.879263 * X + -0.266747 * Y + -0.394641 * Z + -159.878738 Z_new = 0.475156 * X + -0.549440 * Y + -0.687272 * Z + -73.269112 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.608882 -0.495142 -2.467187 [DEG: -92.1822 -28.3695 -141.3594 ] ZXZ: 0.996453 2.328523 2.428568 [DEG: 57.0926 133.4145 139.1467 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS291_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS291_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 14 2.98 27.431 9.37 REMARK ---------------------------------------------------------- MOLECULE T0543TS291_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 4.671 91.063 14.523 1.00 1.00 N ATOM 729 CA THR 96 5.282 92.240 15.082 1.00 1.00 C ATOM 730 C THR 96 4.248 92.983 15.876 1.00 1.00 C ATOM 731 O THR 96 4.574 93.675 16.840 1.00 1.00 O ATOM 732 CB THR 96 5.831 93.168 13.983 1.00 1.00 C ATOM 733 OG1 THR 96 6.837 92.479 13.230 1.00 1.00 O ATOM 734 CG2 THR 96 6.445 94.417 14.597 1.00 1.00 C ATOM 735 N ALA 97 2.962 92.874 15.472 1.00 1.00 N ATOM 736 CA ALA 97 1.902 93.523 16.198 1.00 1.00 C ATOM 737 C ALA 97 1.785 92.865 17.542 1.00 1.00 C ATOM 738 O ALA 97 1.138 93.396 18.444 1.00 1.00 O ATOM 739 CB ALA 97 0.586 93.391 15.446 1.00 1.00 C ATOM 740 N ARG 98 2.394 91.668 17.703 1.00 1.00 N ATOM 741 CA ARG 98 2.345 90.987 18.969 1.00 1.00 C ATOM 742 C ARG 98 3.753 90.772 19.447 1.00 1.00 C ATOM 743 O ARG 98 3.978 90.113 20.460 1.00 1.00 O ATOM 744 CB ARG 98 1.644 89.635 18.824 1.00 1.00 C ATOM 745 CG ARG 98 2.253 88.729 17.766 1.00 1.00 C ATOM 746 CD ARG 98 1.572 87.371 17.742 1.00 1.00 C ATOM 747 NE ARG 98 1.882 86.581 18.932 1.00 1.00 N ATOM 748 CZ ARG 98 3.033 85.946 19.127 1.00 1.00 C ATOM 749 NH1 ARG 98 3.226 85.253 20.241 1.00 1.00 H ATOM 750 NH2 ARG 98 3.988 86.006 18.209 1.00 1.00 H ATOM 751 N GLY 99 4.746 91.313 18.703 1.00 1.00 N ATOM 752 CA GLY 99 6.120 91.203 19.114 1.00 1.00 C ATOM 753 C GLY 99 6.996 91.593 17.958 1.00 1.00 C ATOM 754 O GLY 99 6.683 92.525 17.220 1.00 1.00 O ATOM 755 N TRP 100 8.131 90.877 17.774 1.00 1.00 N ATOM 756 CA TRP 100 9.015 91.170 16.678 1.00 1.00 C ATOM 757 C TRP 100 8.517 90.426 15.472 1.00 1.00 C ATOM 758 O TRP 100 8.128 89.265 15.574 1.00 1.00 O ATOM 759 CB TRP 100 10.441 90.727 17.006 1.00 1.00 C ATOM 760 CG TRP 100 11.078 91.522 18.105 1.00 1.00 C ATOM 761 CD1 TRP 100 11.215 91.151 19.412 1.00 1.00 C ATOM 762 CD2 TRP 100 11.665 92.825 17.994 1.00 1.00 C ATOM 763 NE1 TRP 100 11.851 92.140 20.123 1.00 1.00 N ATOM 764 CE2 TRP 100 12.138 93.180 19.273 1.00 1.00 C ATOM 765 CE3 TRP 100 11.838 93.725 16.938 1.00 1.00 C ATOM 766 CZ2 TRP 100 12.771 94.395 19.524 1.00 1.00 C ATOM 767 CZ3 TRP 100 12.466 94.929 17.192 1.00 1.00 C ATOM 768 CH2 TRP 100 12.926 95.257 18.472 1.00 1.00 H ATOM 769 N GLU 101 8.496 91.087 14.289 1.00 1.00 N ATOM 770 CA GLU 101 8.047 90.419 13.095 1.00 1.00 C ATOM 771 C GLU 101 9.206 89.681 12.483 1.00 1.00 C ATOM 772 O GLU 101 10.305 90.220 12.375 1.00 1.00 O ATOM 773 CB GLU 101 7.506 91.432 12.085 1.00 1.00 C ATOM 774 CG GLU 101 6.986 90.811 10.799 1.00 1.00 C ATOM 775 CD GLU 101 6.488 91.847 9.811 1.00 1.00 C ATOM 776 OE1 GLU 101 6.554 93.052 10.131 1.00 1.00 O ATOM 777 OE2 GLU 101 6.031 91.453 8.717 1.00 1.00 O ATOM 778 N CYS 102 8.984 88.406 12.084 1.00 1.00 N ATOM 779 CA CYS 102 10.022 87.630 11.455 1.00 1.00 C ATOM 780 C CYS 102 9.466 87.018 10.202 1.00 1.00 C ATOM 781 O CYS 102 9.917 85.961 9.766 1.00 1.00 O ATOM 782 CB CYS 102 10.505 86.521 12.393 1.00 1.00 C ATOM 783 SG CYS 102 11.954 85.618 11.799 1.00 1.00 S ATOM 784 N THR 103 8.442 87.668 9.601 1.00 1.00 N ATOM 785 CA THR 103 7.868 87.183 8.374 1.00 1.00 C ATOM 786 C THR 103 8.918 87.245 7.303 1.00 1.00 C ATOM 787 O THR 103 9.872 88.015 7.406 1.00 1.00 O ATOM 788 CB THR 103 6.659 88.032 7.941 1.00 1.00 C ATOM 789 OG1 THR 103 7.070 89.393 7.754 1.00 1.00 O ATOM 790 CG2 THR 103 5.570 87.989 9.002 1.00 1.00 C ATOM 791 N LYS 104 8.780 86.411 6.246 1.00 1.00 N ATOM 792 CA LYS 104 9.728 86.436 5.164 1.00 1.00 C ATOM 793 C LYS 104 9.903 87.857 4.715 1.00 1.00 C ATOM 794 O LYS 104 11.012 88.279 4.390 1.00 1.00 O ATOM 795 CB LYS 104 9.226 85.591 3.992 1.00 1.00 C ATOM 796 CG LYS 104 10.183 85.535 2.813 1.00 1.00 C ATOM 797 CD LYS 104 9.657 84.620 1.718 1.00 1.00 C ATOM 798 CE LYS 104 10.599 84.589 0.526 1.00 1.00 C ATOM 799 NZ LYS 104 10.100 83.692 -0.553 1.00 1.00 N ATOM 800 N ASP 105 8.795 88.632 4.662 1.00 1.00 N ATOM 801 CA ASP 105 8.875 90.013 4.261 1.00 1.00 C ATOM 802 C ASP 105 9.759 90.736 5.238 1.00 1.00 C ATOM 803 O ASP 105 10.473 91.663 4.862 1.00 1.00 O ATOM 804 CB ASP 105 7.484 90.651 4.258 1.00 1.00 C ATOM 805 CG ASP 105 6.628 90.174 3.101 1.00 1.00 C ATOM 806 OD1 ASP 105 7.177 89.539 2.177 1.00 1.00 O ATOM 807 OD2 ASP 105 5.407 90.438 3.119 1.00 1.00 O ATOM 808 N ARG 106 9.719 90.345 6.533 1.00 1.00 N ATOM 809 CA ARG 106 10.568 90.979 7.511 1.00 1.00 C ATOM 810 C ARG 106 11.977 90.506 7.296 1.00 1.00 C ATOM 811 O ARG 106 12.910 91.307 7.279 1.00 1.00 O ATOM 812 CB ARG 106 10.118 90.614 8.927 1.00 1.00 C ATOM 813 CG ARG 106 10.976 91.222 10.026 1.00 1.00 C ATOM 814 CD ARG 106 10.915 92.740 9.998 1.00 1.00 C ATOM 815 NE ARG 106 11.655 93.338 11.106 1.00 1.00 N ATOM 816 CZ ARG 106 11.951 94.631 11.195 1.00 1.00 C ATOM 817 NH1 ARG 106 12.629 95.085 12.240 1.00 1.00 H ATOM 818 NH2 ARG 106 11.568 95.467 10.240 1.00 1.00 H ATOM 819 N CYS 107 12.169 89.174 7.150 1.00 1.00 N ATOM 820 CA CYS 107 13.483 88.637 6.914 1.00 1.00 C ATOM 821 C CYS 107 13.367 87.519 5.917 1.00 1.00 C ATOM 822 O CYS 107 12.284 86.979 5.704 1.00 1.00 O ATOM 823 CB CYS 107 14.084 88.100 8.216 1.00 1.00 C ATOM 824 SG CYS 107 15.813 87.587 8.083 1.00 1.00 S ATOM 825 N GLY 108 14.495 87.157 5.260 1.00 1.00 N ATOM 826 CA GLY 108 14.485 86.064 4.323 1.00 1.00 C ATOM 827 C GLY 108 14.656 86.614 2.936 1.00 1.00 C ATOM 828 O GLY 108 15.244 85.966 2.071 1.00 1.00 O ATOM 829 N GLU 109 14.138 87.841 2.691 1.00 1.00 N ATOM 830 CA GLU 109 14.271 88.464 1.401 1.00 1.00 C ATOM 831 C GLU 109 15.729 88.706 1.136 1.00 1.00 C ATOM 832 O GLU 109 16.139 88.850 -0.015 1.00 1.00 O ATOM 833 CB GLU 109 13.519 89.795 1.368 1.00 1.00 C ATOM 834 CG GLU 109 12.006 89.655 1.377 1.00 1.00 C ATOM 835 CD GLU 109 11.296 90.993 1.435 1.00 1.00 C ATOM 836 OE1 GLU 109 11.987 92.027 1.557 1.00 1.00 O ATOM 837 OE2 GLU 109 10.049 91.008 1.359 1.00 1.00 O ATOM 838 N VAL 110 16.552 88.781 2.207 1.00 1.00 N ATOM 839 CA VAL 110 17.967 88.987 2.034 1.00 1.00 C ATOM 840 C VAL 110 18.684 87.713 2.382 1.00 1.00 C ATOM 841 O VAL 110 19.904 87.703 2.536 1.00 1.00 O ATOM 842 CB VAL 110 18.488 90.116 2.942 1.00 1.00 C ATOM 843 CG1 VAL 110 17.837 91.440 2.572 1.00 1.00 C ATOM 844 CG2 VAL 110 18.171 89.816 4.399 1.00 1.00 C ATOM 845 N ARG 111 17.928 86.600 2.537 1.00 1.00 N ATOM 846 CA ARG 111 18.536 85.330 2.840 1.00 1.00 C ATOM 847 C ARG 111 19.312 84.876 1.638 1.00 1.00 C ATOM 848 O ARG 111 18.956 85.199 0.505 1.00 1.00 O ATOM 849 CB ARG 111 17.465 84.292 3.179 1.00 1.00 C ATOM 850 CG ARG 111 16.699 83.773 1.972 1.00 1.00 C ATOM 851 CD ARG 111 15.674 82.727 2.377 1.00 1.00 C ATOM 852 NE ARG 111 14.972 82.173 1.220 1.00 1.00 N ATOM 853 CZ ARG 111 13.960 81.316 1.302 1.00 1.00 C ATOM 854 NH1 ARG 111 13.382 80.866 0.196 1.00 1.00 H ATOM 855 NH2 ARG 111 13.527 80.912 2.488 1.00 1.00 H ATOM 856 N ASN 112 20.418 84.128 1.859 1.00 1.00 N ATOM 857 CA ASN 112 21.204 83.632 0.759 1.00 1.00 C ATOM 858 C ASN 112 20.756 82.233 0.438 1.00 1.00 C ATOM 859 O ASN 112 20.833 81.342 1.282 1.00 1.00 O ATOM 860 CB ASN 112 22.689 83.618 1.126 1.00 1.00 C ATOM 861 CG ASN 112 23.236 85.005 1.395 1.00 1.00 C ATOM 862 OD1 ASN 112 23.277 85.852 0.502 1.00 1.00 O ATOM 863 ND2 ASN 112 23.659 85.243 2.631 1.00 1.00 N ATOM 864 N GLU 113 20.247 82.014 -0.797 1.00 1.00 N ATOM 865 CA GLU 113 19.822 80.699 -1.203 1.00 1.00 C ATOM 866 C GLU 113 21.019 79.792 -1.196 1.00 1.00 C ATOM 867 O GLU 113 20.877 78.571 -1.164 1.00 1.00 O ATOM 868 CB GLU 113 19.220 80.740 -2.609 1.00 1.00 C ATOM 869 CG GLU 113 17.867 81.428 -2.685 1.00 1.00 C ATOM 870 CD GLU 113 17.344 81.530 -4.104 1.00 1.00 C ATOM 871 OE1 GLU 113 18.078 81.140 -5.037 1.00 1.00 O ATOM 872 OE2 GLU 113 16.200 81.997 -4.283 1.00 1.00 O ATOM 873 N GLU 114 22.241 80.371 -1.250 1.00 1.00 N ATOM 874 CA GLU 114 23.435 79.567 -1.213 1.00 1.00 C ATOM 875 C GLU 114 23.893 79.447 0.212 1.00 1.00 C ATOM 876 O GLU 114 24.941 78.867 0.486 1.00 1.00 O ATOM 877 CB GLU 114 24.542 80.213 -2.048 1.00 1.00 C ATOM 878 CG GLU 114 24.254 80.248 -3.540 1.00 1.00 C ATOM 879 CD GLU 114 25.350 80.936 -4.329 1.00 1.00 C ATOM 880 OE1 GLU 114 26.324 81.409 -3.705 1.00 1.00 O ATOM 881 OE2 GLU 114 25.236 81.004 -5.571 1.00 1.00 O ATOM 882 N ASN 115 23.118 80.021 1.164 1.00 1.00 N ATOM 883 CA ASN 115 23.463 79.927 2.560 1.00 1.00 C ATOM 884 C ASN 115 22.205 79.649 3.336 1.00 1.00 C ATOM 885 O ASN 115 21.138 80.152 2.992 1.00 1.00 O ATOM 886 CB ASN 115 24.089 81.235 3.047 1.00 1.00 C ATOM 887 CG ASN 115 25.378 81.569 2.322 1.00 1.00 C ATOM 888 OD1 ASN 115 26.428 80.995 2.608 1.00 1.00 O ATOM 889 ND2 ASN 115 25.300 82.503 1.380 1.00 1.00 N ATOM 890 N ALA 116 22.295 78.816 4.400 1.00 1.00 N ATOM 891 CA ALA 116 21.137 78.536 5.210 1.00 1.00 C ATOM 892 C ALA 116 21.437 78.937 6.628 1.00 1.00 C ATOM 893 O ALA 116 22.511 78.643 7.151 1.00 1.00 O ATOM 894 CB ALA 116 20.803 77.053 5.163 1.00 1.00 C ATOM 895 N CYS 117 20.490 79.648 7.285 1.00 1.00 N ATOM 896 CA CYS 117 20.679 80.043 8.657 1.00 1.00 C ATOM 897 C CYS 117 19.458 79.650 9.441 1.00 1.00 C ATOM 898 O CYS 117 18.336 79.783 8.955 1.00 1.00 O ATOM 899 CB CYS 117 20.881 81.557 8.756 1.00 1.00 C ATOM 900 SG CYS 117 22.365 82.168 7.922 1.00 1.00 S ATOM 901 N HIS 118 19.649 79.128 10.677 1.00 1.00 N ATOM 902 CA HIS 118 18.528 78.762 11.503 1.00 1.00 C ATOM 903 C HIS 118 18.767 79.286 12.892 1.00 1.00 C ATOM 904 O HIS 118 19.852 79.119 13.446 1.00 1.00 O ATOM 905 CB HIS 118 18.374 77.240 11.553 1.00 1.00 C ATOM 906 CG HIS 118 18.141 76.613 10.214 1.00 1.00 C ATOM 907 ND1 HIS 118 16.890 76.511 9.647 1.00 1.00 N ATOM 908 CD2 HIS 118 18.979 75.992 9.198 1.00 1.00 C ATOM 909 CE1 HIS 118 16.999 75.905 8.451 1.00 1.00 C ATOM 910 NE2 HIS 118 18.249 75.591 8.176 1.00 1.00 N ATOM 911 N CYS 119 17.754 79.958 13.486 1.00 1.00 N ATOM 912 CA CYS 119 17.882 80.461 14.829 1.00 1.00 C ATOM 913 C CYS 119 16.703 81.345 15.122 1.00 1.00 C ATOM 914 O CYS 119 15.663 81.232 14.473 1.00 1.00 O ATOM 915 CB CYS 119 19.174 81.268 14.978 1.00 1.00 C ATOM 916 SG CYS 119 19.477 81.889 16.649 1.00 1.00 S ATOM 917 N SER 120 16.824 82.240 16.131 1.00 1.00 N ATOM 918 CA SER 120 15.747 83.143 16.446 1.00 1.00 C ATOM 919 C SER 120 16.315 84.513 16.686 1.00 1.00 C ATOM 920 O SER 120 15.923 85.197 17.630 1.00 1.00 O ATOM 921 CB SER 120 15.008 82.677 17.701 1.00 1.00 C ATOM 922 OG SER 120 15.901 82.510 18.788 1.00 1.00 O ATOM 923 N GLU 121 17.283 84.940 15.837 1.00 1.00 N ATOM 924 CA GLU 121 17.861 86.254 15.965 1.00 1.00 C ATOM 925 C GLU 121 18.322 86.697 14.604 1.00 1.00 C ATOM 926 O GLU 121 17.828 86.211 13.588 1.00 1.00 O ATOM 927 CB GLU 121 19.051 86.225 16.926 1.00 1.00 C ATOM 928 CG GLU 121 18.670 85.979 18.377 1.00 1.00 C ATOM 929 CD GLU 121 19.877 85.752 19.266 1.00 1.00 C ATOM 930 OE1 GLU 121 20.760 86.635 19.306 1.00 1.00 O ATOM 931 OE2 GLU 121 19.941 84.691 19.922 1.00 1.00 O ATOM 932 N ASP 122 19.273 87.659 14.548 1.00 1.00 N ATOM 933 CA ASP 122 19.778 88.121 13.282 1.00 1.00 C ATOM 934 C ASP 122 20.702 87.073 12.724 1.00 1.00 C ATOM 935 O ASP 122 20.987 87.070 11.527 1.00 1.00 O ATOM 936 CB ASP 122 20.543 89.434 13.457 1.00 1.00 C ATOM 937 CG ASP 122 19.629 90.606 13.756 1.00 1.00 C ATOM 938 OD1 ASP 122 18.402 90.464 13.572 1.00 1.00 O ATOM 939 OD2 ASP 122 20.140 91.666 14.175 1.00 1.00 O ATOM 940 N CYS 123 21.218 86.162 13.582 1.00 1.00 N ATOM 941 CA CYS 123 22.086 85.115 13.103 1.00 1.00 C ATOM 942 C CYS 123 21.240 83.978 12.600 1.00 1.00 C ATOM 943 O CYS 123 21.763 82.954 12.161 1.00 1.00 O ATOM 944 CB CYS 123 22.992 84.612 14.229 1.00 1.00 C ATOM 945 SG CYS 123 24.176 85.835 14.836 1.00 1.00 S ATOM 946 N LEU 124 19.895 84.125 12.676 1.00 1.00 N ATOM 947 CA LEU 124 19.000 83.097 12.207 1.00 1.00 C ATOM 948 C LEU 124 18.428 83.521 10.883 1.00 1.00 C ATOM 949 O LEU 124 17.742 84.540 10.794 1.00 1.00 O ATOM 950 CB LEU 124 17.860 82.882 13.205 1.00 1.00 C ATOM 951 CG LEU 124 16.800 81.851 12.813 1.00 1.00 C ATOM 952 CD1 LEU 124 17.407 80.458 12.742 1.00 1.00 C ATOM 953 CD2 LEU 124 15.671 81.827 13.831 1.00 1.00 C ATOM 954 N SER 125 18.718 82.753 9.804 1.00 1.00 N ATOM 955 CA SER 125 18.173 83.061 8.507 1.00 1.00 C ATOM 956 C SER 125 16.686 83.242 8.647 1.00 1.00 C ATOM 957 O SER 125 16.037 82.518 9.400 1.00 1.00 O ATOM 958 CB SER 125 18.458 81.925 7.522 1.00 1.00 C ATOM 959 OG SER 125 17.873 82.186 6.259 1.00 1.00 O ATOM 960 N ARG 126 16.109 84.238 7.934 1.00 1.00 N ATOM 961 CA ARG 126 14.686 84.464 7.996 1.00 1.00 C ATOM 962 C ARG 126 13.977 83.199 7.595 1.00 1.00 C ATOM 963 O ARG 126 12.958 82.840 8.182 1.00 1.00 O ATOM 964 CB ARG 126 14.281 85.594 7.047 1.00 1.00 C ATOM 965 CG ARG 126 12.783 85.844 6.986 1.00 1.00 C ATOM 966 CD ARG 126 12.238 86.274 8.338 1.00 1.00 C ATOM 967 NE ARG 126 12.764 87.573 8.752 1.00 1.00 N ATOM 968 CZ ARG 126 12.622 88.080 9.972 1.00 1.00 C ATOM 969 NH1 ARG 126 13.135 89.269 10.258 1.00 1.00 H ATOM 970 NH2 ARG 126 11.970 87.398 10.903 1.00 1.00 H ATOM 971 N GLY 127 14.497 82.500 6.558 1.00 1.00 N ATOM 972 CA GLY 127 13.919 81.249 6.136 1.00 1.00 C ATOM 973 C GLY 127 14.256 80.195 7.150 1.00 1.00 C ATOM 974 O GLY 127 13.794 79.059 7.052 1.00 1.00 O ATOM 975 N ASP 128 15.083 80.549 8.166 1.00 1.00 N ATOM 976 CA ASP 128 15.447 79.605 9.192 1.00 1.00 C ATOM 977 C ASP 128 14.347 79.567 10.217 1.00 1.00 C ATOM 978 O ASP 128 14.334 78.694 11.083 1.00 1.00 O ATOM 979 CB ASP 128 16.757 80.022 9.864 1.00 1.00 C ATOM 980 CG ASP 128 17.961 79.831 8.963 1.00 1.00 C ATOM 981 OD1 ASP 128 17.830 79.128 7.938 1.00 1.00 O ATOM 982 OD2 ASP 128 19.035 80.383 9.282 1.00 1.00 O ATOM 983 N CYS 129 13.399 80.534 10.162 1.00 1.00 N ATOM 984 CA CYS 129 12.297 80.532 11.090 1.00 1.00 C ATOM 985 C CYS 129 11.210 79.645 10.550 1.00 1.00 C ATOM 986 O CYS 129 10.807 78.683 11.199 1.00 1.00 O ATOM 987 CB CYS 129 11.748 81.948 11.273 1.00 1.00 C ATOM 988 SG CYS 129 12.916 83.111 12.018 1.00 1.00 S ATOM 989 N CYS 130 10.688 79.967 9.341 1.00 1.00 N ATOM 990 CA CYS 130 9.665 79.150 8.735 1.00 1.00 C ATOM 991 C CYS 130 10.240 78.489 7.515 1.00 1.00 C ATOM 992 O CYS 130 11.282 78.904 7.008 1.00 1.00 O ATOM 993 CB CYS 130 8.465 80.008 8.331 1.00 1.00 C ATOM 994 SG CYS 130 8.796 81.169 6.985 1.00 1.00 S ATOM 995 N THR 131 9.577 77.416 7.020 1.00 1.00 N ATOM 996 CA THR 131 10.039 76.735 5.837 1.00 1.00 C ATOM 997 C THR 131 9.813 77.626 4.646 1.00 1.00 C ATOM 998 O THR 131 10.688 77.767 3.795 1.00 1.00 O ATOM 999 CB THR 131 9.284 75.411 5.617 1.00 1.00 C ATOM 1000 OG1 THR 131 9.521 74.533 6.723 1.00 1.00 O ATOM 1001 CG2 THR 131 9.757 74.733 4.339 1.00 1.00 C ATOM 1002 N ASN 132 8.608 78.238 4.549 1.00 1.00 N ATOM 1003 CA ASN 132 8.312 79.131 3.458 1.00 1.00 C ATOM 1004 C ASN 132 7.298 80.140 3.923 1.00 1.00 C ATOM 1005 O ASN 132 6.898 80.132 5.086 1.00 1.00 O ATOM 1006 CB ASN 132 7.747 78.355 2.268 1.00 1.00 C ATOM 1007 CG ASN 132 6.472 77.608 2.611 1.00 1.00 C ATOM 1008 OD1 ASN 132 5.516 78.194 3.119 1.00 1.00 O ATOM 1009 ND2 ASN 132 6.455 76.310 2.333 1.00 1.00 N ATOM 1010 N TYR 133 6.872 81.057 3.021 1.00 1.00 N ATOM 1011 CA TYR 133 5.887 82.044 3.383 1.00 1.00 C ATOM 1012 C TYR 133 4.771 81.988 2.373 1.00 1.00 C ATOM 1013 O TYR 133 5.008 82.145 1.176 1.00 1.00 O ATOM 1014 CB TYR 133 6.505 83.443 3.386 1.00 1.00 C ATOM 1015 CG TYR 133 5.535 84.542 3.755 1.00 1.00 C ATOM 1016 CD1 TYR 133 5.153 84.740 5.075 1.00 1.00 C ATOM 1017 CD2 TYR 133 5.004 85.377 2.781 1.00 1.00 C ATOM 1018 CE1 TYR 133 4.267 85.743 5.421 1.00 1.00 C ATOM 1019 CE2 TYR 133 4.115 86.384 3.108 1.00 1.00 C ATOM 1020 CZ TYR 133 3.749 86.561 4.442 1.00 1.00 C ATOM 1021 OH TYR 133 2.866 87.560 4.784 1.00 1.00 H ATOM 1022 N GLN 134 3.518 81.736 2.826 1.00 1.00 N ATOM 1023 CA GLN 134 2.407 81.677 1.907 1.00 1.00 C ATOM 1024 C GLN 134 1.383 82.709 2.302 1.00 1.00 C ATOM 1025 O GLN 134 1.082 82.874 3.483 1.00 1.00 O ATOM 1026 CB GLN 134 1.759 80.292 1.937 1.00 1.00 C ATOM 1027 CG GLN 134 2.663 79.173 1.445 1.00 1.00 C ATOM 1028 CD GLN 134 1.998 77.812 1.517 1.00 1.00 C ATOM 1029 OE1 GLN 134 0.838 77.698 1.912 1.00 1.00 O ATOM 1030 NE2 GLN 134 2.733 76.775 1.134 1.00 1.00 N ATOM 1031 N VAL 135 0.832 83.446 1.307 1.00 1.00 N ATOM 1032 CA VAL 135 -0.169 84.450 1.575 1.00 1.00 C ATOM 1033 C VAL 135 -1.472 83.753 1.861 1.00 1.00 C ATOM 1034 O VAL 135 -1.903 82.896 1.091 1.00 1.00 O ATOM 1035 CB VAL 135 -0.358 85.394 0.374 1.00 1.00 C ATOM 1036 CG1 VAL 135 -1.481 86.384 0.645 1.00 1.00 C ATOM 1037 CG2 VAL 135 0.919 86.176 0.105 1.00 1.00 C ATOM 1038 N VAL 136 -2.128 84.089 2.999 1.00 1.00 N ATOM 1039 CA VAL 136 -3.398 83.496 3.331 1.00 1.00 C ATOM 1040 C VAL 136 -4.487 84.380 2.784 1.00 1.00 C ATOM 1041 O VAL 136 -5.473 83.889 2.234 1.00 1.00 O ATOM 1042 CB VAL 136 -3.577 83.360 4.854 1.00 1.00 C ATOM 1043 CG1 VAL 136 -4.965 82.831 5.183 1.00 1.00 C ATOM 1044 CG2 VAL 136 -2.548 82.398 5.428 1.00 1.00 C ATOM 1045 N CYS 137 -4.347 85.721 2.941 1.00 1.00 N ATOM 1046 CA CYS 137 -5.335 86.633 2.416 1.00 1.00 C ATOM 1047 C CYS 137 -4.890 88.039 2.712 1.00 1.00 C ATOM 1048 O CYS 137 -4.065 88.262 3.597 1.00 1.00 O ATOM 1049 CB CYS 137 -6.696 86.380 3.067 1.00 1.00 C ATOM 1050 SG CYS 137 -6.746 86.709 4.845 1.00 1.00 S ATOM 1051 N LYS 138 -5.417 89.033 1.954 1.00 1.00 N ATOM 1052 CA LYS 138 -5.066 90.410 2.190 1.00 1.00 C ATOM 1053 C LYS 138 -5.889 90.927 3.339 1.00 1.00 C ATOM 1054 O LYS 138 -5.563 91.954 3.931 1.00 1.00 O ATOM 1055 CB LYS 138 -5.346 91.256 0.945 1.00 1.00 C ATOM 1056 CG LYS 138 -4.454 90.926 -0.241 1.00 1.00 C ATOM 1057 CD LYS 138 -4.794 91.791 -1.444 1.00 1.00 C ATOM 1058 CE LYS 138 -3.885 91.480 -2.623 1.00 1.00 C ATOM 1059 NZ LYS 138 -4.192 92.337 -3.801 1.00 1.00 N ATOM 1060 N GLY 139 -7.002 90.227 3.673 1.00 1.00 N ATOM 1061 CA GLY 139 -7.816 90.623 4.795 1.00 1.00 C ATOM 1062 C GLY 139 -8.556 91.885 4.445 1.00 1.00 C ATOM 1063 O GLY 139 -9.062 92.581 5.326 1.00 1.00 O ATOM 1064 N GLU 140 -8.637 92.211 3.132 1.00 1.00 N ATOM 1065 CA GLU 140 -9.347 93.388 2.696 1.00 1.00 C ATOM 1066 C GLU 140 -10.414 92.969 1.718 1.00 1.00 C ATOM 1067 O GLU 140 -11.347 93.725 1.452 1.00 1.00 O ATOM 1068 CB GLU 140 -8.391 94.369 2.016 1.00 1.00 C ATOM 1069 CG GLU 140 -7.328 94.940 2.941 1.00 1.00 C ATOM 1070 CD GLU 140 -6.376 95.878 2.224 1.00 1.00 C ATOM 1071 OE1 GLU 140 -6.547 96.081 1.004 1.00 1.00 O ATOM 1072 OE2 GLU 140 -5.458 96.411 2.883 1.00 1.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 79.74 44.3 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 77.56 46.8 62 100.0 62 ARMSMC BURIED . . . . . . . . 84.70 38.5 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.96 46.2 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 92.39 44.4 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 88.81 50.0 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 95.12 38.5 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.91 52.2 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 70.95 66.7 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 74.90 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 87.37 42.9 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.64 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 72.55 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 61.09 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 95.84 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.29 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 83.29 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 94.70 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 53.60 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.37 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.37 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.2082 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 9.66 32 100.0 32 CRMSCA BURIED . . . . . . . . 8.60 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.52 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.82 156 100.0 156 CRMSMC BURIED . . . . . . . . 8.76 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.40 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 11.61 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 12.40 112 100.0 112 CRMSSC BURIED . . . . . . . . 8.93 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.33 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 10.93 240 100.0 240 CRMSALL BURIED . . . . . . . . 8.79 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.255 0.712 0.360 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 7.607 0.728 0.370 32 100.0 32 ERRCA BURIED . . . . . . . . 6.388 0.670 0.335 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.376 0.709 0.355 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 7.684 0.719 0.360 156 100.0 156 ERRMC BURIED . . . . . . . . 6.636 0.687 0.344 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.183 0.762 0.381 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 9.361 0.765 0.382 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 10.216 0.780 0.390 112 100.0 112 ERRSC BURIED . . . . . . . . 7.001 0.725 0.362 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.109 0.731 0.366 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 8.695 0.743 0.372 240 100.0 240 ERRALL BURIED . . . . . . . . 6.769 0.704 0.352 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 2 7 14 29 45 45 DISTCA CA (P) 2.22 4.44 15.56 31.11 64.44 45 DISTCA CA (RMS) 0.56 1.35 2.24 3.33 6.07 DISTCA ALL (N) 2 19 40 84 197 345 345 DISTALL ALL (P) 0.58 5.51 11.59 24.35 57.10 345 DISTALL ALL (RMS) 0.76 1.60 2.16 3.29 6.10 DISTALL END of the results output