####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 373), selected 40 , name T0543TS286_1_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS286_1_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 2.40 2.40 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 69 - 93 1.94 2.66 LONGEST_CONTINUOUS_SEGMENT: 25 70 - 94 1.98 2.71 LONGEST_CONTINUOUS_SEGMENT: 25 71 - 95 1.99 2.50 LCS_AVERAGE: 49.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.96 3.63 LCS_AVERAGE: 24.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 5 10 40 0 3 14 27 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 6 10 40 0 12 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 6 10 40 3 12 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 6 10 40 3 13 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 6 10 40 3 7 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 6 10 40 3 11 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 6 10 40 3 10 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 4 10 40 3 4 5 8 30 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 4 10 40 3 4 8 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 6 10 40 4 5 18 26 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 6 8 40 4 5 5 11 12 22 33 36 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 6 7 40 4 5 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 6 7 40 4 5 17 25 32 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 6 25 40 3 5 14 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 6 25 40 2 4 5 8 16 19 31 36 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 3 25 40 2 3 3 4 9 17 26 36 37 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 8 25 40 4 9 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 14 25 40 4 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 14 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 14 25 40 4 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 14 25 40 4 11 19 28 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 14 25 40 5 11 19 26 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 14 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 14 25 40 5 13 19 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 14 25 40 4 7 15 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 14 25 40 5 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 14 25 40 5 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 14 25 40 4 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 14 25 40 5 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 14 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 14 25 40 5 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 12 25 40 3 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 12 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 12 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 12 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 12 25 40 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 12 25 40 5 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 11 25 40 4 11 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 9 25 40 3 6 12 25 30 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 9 25 40 3 6 15 25 30 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 58.12 ( 24.56 49.81 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 13 20 29 33 37 37 37 38 40 40 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 15.00 32.50 50.00 72.50 82.50 92.50 92.50 92.50 95.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.74 1.12 1.43 1.58 1.82 1.82 1.82 1.99 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 GDT RMS_ALL_AT 2.61 2.55 2.65 2.50 2.44 2.46 2.46 2.46 2.47 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 2.40 # Checking swapping # possible swapping detected: E 64 E 64 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 2.081 0 0.346 0.346 2.459 70.952 70.952 LGA S 57 S 57 1.441 0 0.234 0.240 2.706 79.286 74.524 LGA C 58 C 58 1.436 0 0.573 0.531 3.098 73.571 71.984 LGA K 59 K 59 1.158 0 0.270 1.179 8.146 83.690 58.519 LGA G 60 G 60 2.091 0 0.191 0.191 2.402 68.810 68.810 LGA R 61 R 61 1.706 0 0.215 1.582 5.637 77.143 60.909 LGA C 62 C 62 1.726 0 0.620 0.538 3.109 75.119 69.206 LGA F 63 F 63 2.884 0 0.317 1.121 7.795 64.881 36.061 LGA E 64 E 64 1.880 0 0.619 1.153 8.599 69.048 44.286 LGA L 65 L 65 2.525 0 0.672 1.357 6.670 55.833 45.298 LGA Q 66 Q 66 5.505 0 0.174 1.122 10.394 40.000 19.153 LGA E 67 E 67 1.966 0 0.100 0.692 9.098 59.762 33.704 LGA V 68 V 68 2.642 0 0.561 0.670 7.042 71.071 47.687 LGA G 69 G 69 1.937 0 0.512 0.512 2.814 65.000 65.000 LGA P 70 P 70 6.493 0 0.598 0.499 8.711 19.762 16.463 LGA P 71 P 71 6.842 0 0.579 0.589 9.281 26.190 17.007 LGA D 72 D 72 2.127 3 0.652 0.601 3.777 55.714 33.274 LGA C 73 C 73 1.354 0 0.209 0.894 2.169 85.952 80.238 LGA R 74 R 74 0.959 0 0.023 0.916 2.056 88.214 80.866 LGA C 75 C 75 1.219 0 0.480 0.783 4.082 85.952 74.286 LGA D 76 D 76 1.785 0 0.067 1.184 5.462 75.000 62.381 LGA N 77 N 77 2.206 0 0.127 0.406 4.236 70.952 58.095 LGA L 78 L 78 0.294 0 0.139 1.226 4.803 97.619 80.119 LGA C 79 C 79 1.102 0 0.145 0.761 2.453 90.595 87.857 LGA K 80 K 80 2.232 0 0.097 0.967 5.591 64.881 51.429 LGA S 81 S 81 2.717 0 0.038 0.696 4.447 57.262 53.889 LGA Y 82 Y 82 2.509 0 0.601 0.495 2.949 60.952 59.683 LGA S 83 S 83 2.053 0 0.376 0.331 3.444 70.952 66.429 LGA S 84 S 84 0.420 0 0.457 0.768 3.376 88.571 80.952 LGA C 85 C 85 0.494 0 0.042 0.122 1.023 92.857 90.556 LGA C 86 C 86 1.324 0 0.023 0.067 1.902 83.690 81.508 LGA H 87 H 87 1.932 0 0.038 0.099 2.972 75.000 64.286 LGA D 88 D 88 0.400 0 0.177 0.155 0.959 97.619 95.238 LGA F 89 F 89 0.072 0 0.286 0.259 0.786 97.619 94.805 LGA D 90 D 90 0.766 0 0.012 0.761 2.656 90.476 81.845 LGA E 91 E 91 0.730 0 0.148 0.433 2.401 88.214 81.693 LGA L 92 L 92 0.745 0 0.136 1.331 5.339 92.857 71.548 LGA C 93 C 93 1.469 0 0.012 0.772 5.691 79.405 66.032 LGA L 94 L 94 3.024 0 0.404 1.313 9.043 53.810 33.155 LGA K 95 K 95 3.012 0 0.626 1.221 7.412 45.357 40.899 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 2.398 2.273 3.514 72.241 61.766 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 37 1.82 74.375 73.791 1.931 LGA_LOCAL RMSD: 1.816 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.456 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 2.398 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.085319 * X + 0.340164 * Y + 0.936488 * Z + 28.882965 Y_new = 0.808298 * X + -0.525930 * Y + 0.264675 * Z + 65.871323 Z_new = 0.582560 * X + 0.779542 * Y + -0.230082 * Z + 4.627177 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.675961 -0.621874 1.857798 [DEG: 96.0255 -35.6308 106.4440 ] ZXZ: 1.846238 1.802958 0.641777 [DEG: 105.7816 103.3019 36.7711 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS286_1_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS286_1_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 37 1.82 73.791 2.40 REMARK ---------------------------------------------------------- MOLECULE T0543TS286_1_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 1 REMARK PFRMAT TS REMARK TARGET T0543 REMARK PARENT 2jq8A 2ys0A ATOM 518 N GLY 56 33.561 71.141 16.433 1.00 50.00 N ATOM 519 CA GLY 56 34.030 71.447 17.766 1.00 50.00 C ATOM 520 C GLY 56 33.517 72.800 18.248 1.00 50.00 C ATOM 521 O GLY 56 33.069 72.933 19.387 1.00 50.00 O ATOM 522 H GLY 56 34.144 71.096 15.750 1.00 50.00 H ATOM 523 N SER 57 33.573 73.811 17.385 1.00 50.00 N ATOM 524 CA SER 57 33.142 75.141 17.817 1.00 50.00 C ATOM 525 C SER 57 31.810 74.812 17.148 1.00 50.00 C ATOM 526 O SER 57 31.766 74.378 15.992 1.00 50.00 O ATOM 527 H SER 57 33.871 73.686 16.546 1.00 50.00 H ATOM 528 CB SER 57 34.079 76.215 17.261 1.00 50.00 C ATOM 529 HG SER 57 32.860 77.626 17.261 1.00 50.00 H ATOM 530 OG SER 57 33.615 77.514 17.585 1.00 50.00 O ATOM 531 N CYS 58 30.704 75.014 17.871 1.00 50.00 N ATOM 532 CA CYS 58 29.443 74.437 17.304 1.00 50.00 C ATOM 533 C CYS 58 28.639 75.334 16.375 1.00 50.00 C ATOM 534 O CYS 58 28.341 76.486 16.725 1.00 50.00 O ATOM 535 H CYS 58 30.682 75.463 18.651 1.00 50.00 H ATOM 536 CB CYS 58 28.502 73.999 18.429 1.00 50.00 C ATOM 537 SG CYS 58 29.148 72.668 19.467 1.00 50.00 S ATOM 538 N LYS 59 28.227 74.894 15.198 1.00 50.00 N ATOM 539 CA LYS 59 27.520 75.674 14.279 1.00 50.00 C ATOM 540 C LYS 59 27.158 74.402 13.594 1.00 50.00 C ATOM 541 O LYS 59 27.858 73.766 13.367 1.00 50.00 O ATOM 542 H LYS 59 28.428 74.039 15.001 1.00 50.00 H ATOM 543 CB LYS 59 28.446 76.698 13.621 1.00 50.00 C ATOM 544 CD LYS 59 27.966 78.685 15.077 1.00 50.00 C ATOM 545 CE LYS 59 28.558 79.731 16.007 1.00 50.00 C ATOM 546 CG LYS 59 29.030 77.718 14.585 1.00 50.00 C ATOM 547 HZ1 LYS 59 27.892 81.221 17.118 1.00 50.00 H ATOM 548 HZ2 LYS 59 26.929 80.136 17.044 1.00 50.00 H ATOM 549 HZ3 LYS 59 27.087 81.044 15.920 1.00 50.00 H ATOM 550 NZ LYS 59 27.512 80.622 16.580 1.00 50.00 N ATOM 551 N GLY 60 26.058 74.050 13.262 1.00 50.00 N ATOM 552 CA GLY 60 25.462 72.948 12.553 1.00 50.00 C ATOM 553 C GLY 60 25.517 71.640 13.231 1.00 50.00 C ATOM 554 O GLY 60 24.708 70.767 13.098 1.00 50.00 O ATOM 555 H GLY 60 25.538 74.710 13.585 1.00 50.00 H ATOM 556 N ARG 61 26.437 71.508 14.019 1.00 50.00 N ATOM 557 CA ARG 61 25.809 70.400 15.289 1.00 50.00 C ATOM 558 C ARG 61 24.468 70.451 15.988 1.00 50.00 C ATOM 559 O ARG 61 24.071 69.488 16.626 1.00 50.00 O ATOM 560 H ARG 61 27.277 71.827 14.076 1.00 50.00 H ATOM 561 CB ARG 61 26.751 70.379 16.494 1.00 50.00 C ATOM 562 CD ARG 61 28.147 68.361 15.970 1.00 50.00 C ATOM 563 HE ARG 61 26.841 67.694 14.601 1.00 50.00 H ATOM 564 NE ARG 61 27.645 67.996 14.647 1.00 50.00 N ATOM 565 CG ARG 61 28.147 69.865 16.183 1.00 50.00 C ATOM 566 CZ ARG 61 28.351 68.102 13.525 1.00 50.00 C ATOM 567 HH11 ARG 61 27.007 67.446 12.341 1.00 50.00 H ATOM 568 HH12 ARG 61 28.269 67.814 11.641 1.00 50.00 H ATOM 569 NH1 ARG 61 27.812 67.747 12.367 1.00 50.00 N ATOM 570 HH21 ARG 61 29.943 68.795 14.316 1.00 50.00 H ATOM 571 HH22 ARG 61 30.050 68.633 12.839 1.00 50.00 H ATOM 572 NH2 ARG 61 29.594 68.564 13.565 1.00 50.00 N ATOM 573 N CYS 62 23.747 71.549 15.862 1.00 50.00 N ATOM 574 CA CYS 62 22.482 71.440 16.787 1.00 50.00 C ATOM 575 C CYS 62 21.320 70.792 16.069 1.00 50.00 C ATOM 576 O CYS 62 20.340 70.505 16.678 1.00 50.00 O ATOM 577 H CYS 62 23.875 72.286 15.361 1.00 50.00 H ATOM 578 CB CYS 62 22.070 72.822 17.296 1.00 50.00 C ATOM 579 SG CYS 62 23.296 73.624 18.356 1.00 50.00 S ATOM 580 N PHE 63 21.407 70.555 14.795 1.00 50.00 N ATOM 581 CA PHE 63 20.313 69.962 14.022 1.00 50.00 C ATOM 582 C PHE 63 20.304 68.431 14.020 1.00 50.00 C ATOM 583 O PHE 63 19.226 67.844 14.086 1.00 50.00 O ATOM 584 H PHE 63 22.180 70.771 14.388 1.00 50.00 H ATOM 585 CB PHE 63 20.359 70.447 12.572 1.00 50.00 C ATOM 586 CG PHE 63 20.007 71.897 12.405 1.00 50.00 C ATOM 587 CZ PHE 63 19.350 74.581 12.096 1.00 50.00 C ATOM 588 CD1 PHE 63 20.909 72.887 12.753 1.00 50.00 C ATOM 589 CE1 PHE 63 20.585 74.222 12.601 1.00 50.00 C ATOM 590 CD2 PHE 63 18.774 72.272 11.902 1.00 50.00 C ATOM 591 CE2 PHE 63 18.449 73.606 11.748 1.00 50.00 C ATOM 592 N GLU 64 21.463 67.782 13.937 1.00 50.00 N ATOM 593 CA GLU 64 21.420 66.354 13.823 1.00 50.00 C ATOM 594 C GLU 64 20.966 65.627 15.089 1.00 50.00 C ATOM 595 O GLU 64 20.133 64.706 15.018 1.00 50.00 O ATOM 596 H GLU 64 22.255 68.209 13.949 1.00 50.00 H ATOM 597 CB GLU 64 22.793 65.807 13.426 1.00 50.00 C ATOM 598 CD GLU 64 22.305 65.527 10.963 1.00 50.00 C ATOM 599 CG GLU 64 23.211 66.152 12.006 1.00 50.00 C ATOM 600 OE1 GLU 64 22.086 64.299 11.025 1.00 50.00 O ATOM 601 OE2 GLU 64 21.814 66.266 10.083 1.00 50.00 O ATOM 602 N LEU 65 21.512 66.023 16.241 1.00 50.00 N ATOM 603 CA LEU 65 21.240 65.343 17.437 1.00 50.00 C ATOM 604 C LEU 65 22.497 65.330 18.297 1.00 50.00 C ATOM 605 O LEU 65 23.608 65.369 17.771 1.00 50.00 O ATOM 606 H LEU 65 22.060 66.736 16.243 1.00 50.00 H ATOM 607 CB LEU 65 20.752 63.922 17.148 1.00 50.00 C ATOM 608 CG LEU 65 20.416 63.060 18.365 1.00 50.00 C ATOM 609 CD1 LEU 65 19.254 63.658 19.144 1.00 50.00 C ATOM 610 CD2 LEU 65 20.091 61.635 17.942 1.00 50.00 C ATOM 611 N GLN 66 22.316 65.282 19.609 1.00 50.00 N ATOM 612 CA GLN 66 23.388 65.277 20.474 1.00 50.00 C ATOM 613 C GLN 66 24.483 64.249 20.233 1.00 50.00 C ATOM 614 O GLN 66 24.304 63.105 20.394 1.00 50.00 O ATOM 615 H GLN 66 21.477 65.254 19.933 1.00 50.00 H ATOM 616 CB GLN 66 22.914 65.077 21.915 1.00 50.00 C ATOM 617 CD GLN 66 23.455 62.724 22.658 1.00 50.00 C ATOM 618 CG GLN 66 22.375 63.684 22.202 1.00 50.00 C ATOM 619 OE1 GLN 66 24.592 63.125 22.908 1.00 50.00 O ATOM 620 HE21 GLN 66 23.707 60.836 23.036 1.00 50.00 H ATOM 621 HE22 GLN 66 22.261 61.195 22.577 1.00 50.00 H ATOM 622 NE2 GLN 66 23.103 61.449 22.769 1.00 50.00 N ATOM 623 N GLU 67 25.600 64.653 19.811 1.00 50.00 N ATOM 624 CA GLU 67 26.719 63.864 19.590 1.00 50.00 C ATOM 625 C GLU 67 27.626 63.772 20.788 1.00 50.00 C ATOM 626 O GLU 67 28.297 64.588 21.031 1.00 50.00 O ATOM 627 H GLU 67 25.635 65.538 19.649 1.00 50.00 H ATOM 628 CB GLU 67 27.521 64.391 18.399 1.00 50.00 C ATOM 629 CD GLU 67 27.618 64.827 15.914 1.00 50.00 C ATOM 630 CG GLU 67 26.788 64.305 17.070 1.00 50.00 C ATOM 631 OE1 GLU 67 28.693 65.409 16.168 1.00 50.00 O ATOM 632 OE2 GLU 67 27.192 64.655 14.752 1.00 50.00 O ATOM 633 N VAL 68 27.614 62.781 21.550 1.00 50.00 N ATOM 634 CA VAL 68 28.543 62.546 22.554 1.00 50.00 C ATOM 635 C VAL 68 29.954 62.166 22.231 1.00 50.00 C ATOM 636 O VAL 68 30.704 62.427 22.656 1.00 50.00 O ATOM 637 H VAL 68 26.943 62.198 21.411 1.00 50.00 H ATOM 638 CB VAL 68 28.070 61.438 23.513 1.00 50.00 C ATOM 639 CG1 VAL 68 29.174 61.076 24.495 1.00 50.00 C ATOM 640 CG2 VAL 68 26.815 61.875 24.254 1.00 50.00 C ATOM 641 N GLY 69 30.347 61.557 21.486 1.00 50.00 N ATOM 642 CA GLY 69 31.910 60.916 22.475 1.00 50.00 C ATOM 643 C GLY 69 32.243 61.236 21.007 1.00 50.00 C ATOM 644 O GLY 69 31.371 61.104 20.139 1.00 50.00 O ATOM 645 H GLY 69 30.202 61.277 20.643 1.00 50.00 H ATOM 646 N PRO 70 33.474 61.624 20.766 1.00 50.00 N ATOM 647 CA PRO 70 34.099 61.872 19.595 1.00 50.00 C ATOM 648 C PRO 70 34.059 63.376 19.418 1.00 50.00 C ATOM 649 O PRO 70 35.016 63.950 18.966 1.00 50.00 O ATOM 650 CB PRO 70 33.267 61.108 18.563 1.00 50.00 C ATOM 651 CD PRO 70 32.093 60.932 20.641 1.00 50.00 C ATOM 652 CG PRO 70 31.898 61.050 19.155 1.00 50.00 C ATOM 653 N PRO 71 32.964 64.014 19.767 1.00 50.00 N ATOM 654 CA PRO 71 32.886 65.415 19.564 1.00 50.00 C ATOM 655 C PRO 71 33.504 65.991 20.828 1.00 50.00 C ATOM 656 O PRO 71 33.248 65.507 21.938 1.00 50.00 O ATOM 657 CB PRO 71 31.388 65.683 19.409 1.00 50.00 C ATOM 658 CD PRO 71 31.625 63.321 19.718 1.00 50.00 C ATOM 659 CG PRO 71 30.812 64.367 19.007 1.00 50.00 C ATOM 660 N ASP 72 34.330 67.018 20.649 1.00 50.00 N ATOM 661 CA ASP 72 34.989 67.623 21.768 1.00 50.00 C ATOM 662 C ASP 72 33.897 68.530 22.297 1.00 50.00 C ATOM 663 O ASP 72 33.938 68.907 23.452 1.00 50.00 O ATOM 664 H ASP 72 34.473 67.334 19.818 1.00 50.00 H ATOM 665 CB ASP 72 36.266 68.336 21.317 1.00 50.00 C ATOM 666 CG ASP 72 37.338 67.371 20.851 1.00 50.00 C ATOM 667 OD1 ASP 72 37.229 66.166 21.165 1.00 50.00 O ATOM 668 OD2 ASP 72 38.286 67.818 20.174 1.00 50.00 O ATOM 669 N CYS 73 32.935 68.906 21.516 1.00 50.00 N ATOM 670 CA CYS 73 32.008 69.836 22.069 1.00 50.00 C ATOM 671 C CYS 73 30.712 69.304 21.485 1.00 50.00 C ATOM 672 O CYS 73 30.709 68.716 20.435 1.00 50.00 O ATOM 673 H CYS 73 32.831 68.615 20.671 1.00 50.00 H ATOM 674 CB CYS 73 32.379 71.265 21.666 1.00 50.00 C ATOM 675 SG CYS 73 34.001 71.809 22.250 1.00 50.00 S ATOM 676 N ARG 74 29.613 69.514 22.168 1.00 50.00 N ATOM 677 CA ARG 74 28.344 69.073 21.721 1.00 50.00 C ATOM 678 C ARG 74 27.276 70.142 21.855 1.00 50.00 C ATOM 679 O ARG 74 27.373 71.011 22.686 1.00 50.00 O ATOM 680 H ARG 74 29.686 69.957 22.948 1.00 50.00 H ATOM 681 CB ARG 74 27.909 67.824 22.491 1.00 50.00 C ATOM 682 CD ARG 74 26.303 65.906 22.686 1.00 50.00 C ATOM 683 HE ARG 74 26.903 65.891 24.600 1.00 50.00 H ATOM 684 NE ARG 74 26.182 65.992 24.140 1.00 50.00 N ATOM 685 CG ARG 74 26.565 67.265 22.056 1.00 50.00 C ATOM 686 CZ ARG 74 25.040 66.214 24.783 1.00 50.00 C ATOM 687 HH11 ARG 74 25.756 66.173 26.551 1.00 50.00 H ATOM 688 HH12 ARG 74 24.287 66.419 26.524 1.00 50.00 H ATOM 689 NH1 ARG 74 25.026 66.276 26.108 1.00 50.00 N ATOM 690 HH21 ARG 74 23.923 66.333 23.241 1.00 50.00 H ATOM 691 HH22 ARG 74 23.176 66.517 24.516 1.00 50.00 H ATOM 692 NH2 ARG 74 23.915 66.374 24.100 1.00 50.00 N ATOM 693 N CYS 75 26.260 70.059 21.027 1.00 50.00 N ATOM 694 CA CYS 75 25.124 70.938 21.096 1.00 50.00 C ATOM 695 C CYS 75 23.888 70.160 20.712 1.00 50.00 C ATOM 696 O CYS 75 23.797 69.667 19.607 1.00 50.00 O ATOM 697 H CYS 75 26.296 69.418 20.397 1.00 50.00 H ATOM 698 CB CYS 75 25.327 72.149 20.184 1.00 50.00 C ATOM 699 SG CYS 75 23.976 73.351 20.227 1.00 50.00 S ATOM 700 N ASP 76 22.948 70.034 21.627 1.00 50.00 N ATOM 701 CA ASP 76 21.654 69.559 21.309 1.00 50.00 C ATOM 702 C ASP 76 20.699 69.902 22.463 1.00 50.00 C ATOM 703 O ASP 76 21.163 70.127 23.582 1.00 50.00 O ATOM 704 H ASP 76 23.148 70.261 22.475 1.00 50.00 H ATOM 705 CB ASP 76 21.686 68.052 21.046 1.00 50.00 C ATOM 706 CG ASP 76 20.490 67.575 20.246 1.00 50.00 C ATOM 707 OD1 ASP 76 19.903 68.394 19.509 1.00 50.00 O ATOM 708 OD2 ASP 76 20.140 66.381 20.358 1.00 50.00 O ATOM 709 N ASN 77 19.403 69.892 22.166 1.00 50.00 N ATOM 710 CA ASN 77 18.417 70.160 23.129 1.00 50.00 C ATOM 711 C ASN 77 18.846 69.376 24.352 1.00 50.00 C ATOM 712 O ASN 77 18.717 69.844 25.469 1.00 50.00 O ATOM 713 H ASN 77 19.165 69.706 21.318 1.00 50.00 H ATOM 714 CB ASN 77 17.034 69.778 22.600 1.00 50.00 C ATOM 715 CG ASN 77 16.525 70.744 21.548 1.00 50.00 C ATOM 716 OD1 ASN 77 17.003 71.874 21.446 1.00 50.00 O ATOM 717 HD21 ASN 77 15.211 70.836 20.120 1.00 50.00 H ATOM 718 HD22 ASN 77 15.228 69.469 20.870 1.00 50.00 H ATOM 719 ND2 ASN 77 15.550 70.303 20.762 1.00 50.00 N ATOM 720 N LEU 78 19.370 68.181 24.155 1.00 50.00 N ATOM 721 CA LEU 78 19.968 67.387 25.203 1.00 50.00 C ATOM 722 C LEU 78 21.150 67.982 25.818 1.00 50.00 C ATOM 723 O LEU 78 21.511 67.616 26.877 1.00 50.00 O ATOM 724 H LEU 78 19.342 67.867 23.312 1.00 50.00 H ATOM 725 CB LEU 78 20.350 66.003 24.675 1.00 50.00 C ATOM 726 CG LEU 78 19.192 65.080 24.294 1.00 50.00 C ATOM 727 CD1 LEU 78 19.712 63.806 23.644 1.00 50.00 C ATOM 728 CD2 LEU 78 18.348 64.744 25.513 1.00 50.00 C ATOM 729 N CYS 79 21.744 68.899 25.171 1.00 50.00 N ATOM 730 CA CYS 79 22.771 69.770 26.146 1.00 50.00 C ATOM 731 C CYS 79 22.586 69.817 27.663 1.00 50.00 C ATOM 732 O CYS 79 23.506 69.508 28.420 1.00 50.00 O ATOM 733 H CYS 79 21.668 69.106 24.299 1.00 50.00 H ATOM 734 CB CYS 79 22.791 71.241 25.724 1.00 50.00 C ATOM 735 SG CYS 79 23.566 71.547 24.120 1.00 50.00 S ATOM 736 N LYS 80 21.388 70.187 28.109 1.00 50.00 N ATOM 737 CA LYS 80 21.105 70.185 29.489 1.00 50.00 C ATOM 738 C LYS 80 21.086 68.788 30.087 1.00 50.00 C ATOM 739 O LYS 80 21.282 68.629 31.269 1.00 50.00 O ATOM 740 H LYS 80 20.756 70.439 27.520 1.00 50.00 H ATOM 741 CB LYS 80 19.762 70.866 29.760 1.00 50.00 C ATOM 742 CD LYS 80 18.400 72.973 29.794 1.00 50.00 C ATOM 743 CE LYS 80 18.406 74.475 29.558 1.00 50.00 C ATOM 744 CG LYS 80 19.762 72.363 29.502 1.00 50.00 C ATOM 745 HZ1 LYS 80 17.111 75.960 29.670 1.00 50.00 H ATOM 746 HZ2 LYS 80 16.837 74.934 30.663 1.00 50.00 H ATOM 747 HZ3 LYS 80 16.469 74.719 29.274 1.00 50.00 H ATOM 748 NZ LYS 80 17.071 75.084 29.818 1.00 50.00 N ATOM 749 N SER 81 20.849 67.776 29.282 1.00 50.00 N ATOM 750 CA SER 81 20.815 66.396 29.753 1.00 50.00 C ATOM 751 C SER 81 22.178 65.849 30.046 1.00 50.00 C ATOM 752 O SER 81 22.394 65.262 31.151 1.00 50.00 O ATOM 753 H SER 81 20.706 67.959 28.412 1.00 50.00 H ATOM 754 CB SER 81 20.121 65.498 28.727 1.00 50.00 C ATOM 755 HG SER 81 19.680 64.103 29.884 1.00 50.00 H ATOM 756 OG SER 81 20.093 64.150 29.166 1.00 50.00 O ATOM 757 N TYR 82 23.084 66.014 29.102 1.00 50.00 N ATOM 758 CA TYR 82 24.514 65.650 29.298 1.00 50.00 C ATOM 759 C TYR 82 24.898 67.038 29.597 1.00 50.00 C ATOM 760 O TYR 82 24.910 67.496 29.203 1.00 50.00 O ATOM 761 H TYR 82 22.811 66.360 28.317 1.00 50.00 H ATOM 762 CB TYR 82 25.073 64.979 28.042 1.00 50.00 C ATOM 763 CG TYR 82 24.450 63.634 27.737 1.00 50.00 C ATOM 764 HH TYR 82 22.043 60.061 26.434 1.00 50.00 H ATOM 765 OH TYR 82 22.726 59.947 26.892 1.00 50.00 O ATOM 766 CZ TYR 82 23.298 61.166 27.172 1.00 50.00 C ATOM 767 CD1 TYR 82 23.289 63.543 26.981 1.00 50.00 C ATOM 768 CE1 TYR 82 22.712 62.319 26.698 1.00 50.00 C ATOM 769 CD2 TYR 82 25.026 62.461 28.207 1.00 50.00 C ATOM 770 CE2 TYR 82 24.464 61.229 27.934 1.00 50.00 C ATOM 771 N SER 83 25.227 67.714 30.283 1.00 50.00 N ATOM 772 CA SER 83 25.360 69.077 30.602 1.00 50.00 C ATOM 773 C SER 83 26.316 69.678 29.598 1.00 50.00 C ATOM 774 O SER 83 26.442 70.817 29.528 1.00 50.00 O ATOM 775 H SER 83 25.525 67.086 30.856 1.00 50.00 H ATOM 776 CB SER 83 25.852 69.245 32.041 1.00 50.00 C ATOM 777 HG SER 83 24.752 67.960 32.827 1.00 50.00 H ATOM 778 OG SER 83 24.892 68.766 32.967 1.00 50.00 O ATOM 779 N SER 84 26.991 68.916 28.817 1.00 50.00 N ATOM 780 CA SER 84 27.910 69.404 27.886 1.00 50.00 C ATOM 781 C SER 84 27.454 70.116 26.619 1.00 50.00 C ATOM 782 O SER 84 26.841 69.515 25.759 1.00 50.00 O ATOM 783 H SER 84 26.850 68.031 28.889 1.00 50.00 H ATOM 784 CB SER 84 28.812 68.276 27.381 1.00 50.00 C ATOM 785 HG SER 84 30.167 68.110 26.111 1.00 50.00 H ATOM 786 OG SER 84 29.689 68.737 26.368 1.00 50.00 O ATOM 787 N CYS 85 27.753 71.394 26.519 1.00 50.00 N ATOM 788 CA CYS 85 27.443 72.150 25.357 1.00 50.00 C ATOM 789 C CYS 85 28.502 73.225 25.211 1.00 50.00 C ATOM 790 O CYS 85 29.229 73.481 26.117 1.00 50.00 O ATOM 791 H CYS 85 28.167 71.788 27.215 1.00 50.00 H ATOM 792 CB CYS 85 26.037 72.744 25.463 1.00 50.00 C ATOM 793 SG CYS 85 24.714 71.516 25.569 1.00 50.00 S ATOM 794 N CYS 86 28.588 73.860 24.072 1.00 50.00 N ATOM 795 CA CYS 86 29.554 74.916 23.881 1.00 50.00 C ATOM 796 C CYS 86 28.859 76.240 24.141 1.00 50.00 C ATOM 797 O CYS 86 27.669 76.359 23.999 1.00 50.00 O ATOM 798 H CYS 86 28.034 73.631 23.401 1.00 50.00 H ATOM 799 CB CYS 86 30.145 74.853 22.472 1.00 50.00 C ATOM 800 SG CYS 86 31.065 73.338 22.114 1.00 50.00 S ATOM 801 N HIS 87 29.615 77.255 24.508 1.00 50.00 N ATOM 802 CA HIS 87 29.088 78.548 24.720 1.00 50.00 C ATOM 803 C HIS 87 28.417 79.097 23.470 1.00 50.00 C ATOM 804 O HIS 87 27.437 79.831 23.559 1.00 50.00 O ATOM 805 H HIS 87 30.494 77.103 24.623 1.00 50.00 H ATOM 806 CB HIS 87 30.188 79.507 25.178 1.00 50.00 C ATOM 807 CG HIS 87 31.207 79.805 24.123 1.00 50.00 C ATOM 808 ND1 HIS 87 32.243 78.947 23.824 1.00 50.00 N ATOM 809 CE1 HIS 87 32.987 79.485 22.840 1.00 50.00 C ATOM 810 CD2 HIS 87 31.448 80.898 23.191 1.00 50.00 C ATOM 811 HE2 HIS 87 32.870 81.204 21.793 1.00 50.00 H ATOM 812 NE2 HIS 87 32.516 80.655 22.456 1.00 50.00 N ATOM 813 N ASP 88 28.918 78.732 22.300 1.00 50.00 N ATOM 814 CA ASP 88 28.286 79.171 21.068 1.00 50.00 C ATOM 815 C ASP 88 27.176 78.224 20.862 1.00 50.00 C ATOM 816 O ASP 88 26.280 78.369 20.059 1.00 50.00 O ATOM 817 H ASP 88 29.651 78.211 22.269 1.00 50.00 H ATOM 818 CB ASP 88 29.299 79.184 19.921 1.00 50.00 C ATOM 819 CG ASP 88 29.846 77.804 19.612 1.00 50.00 C ATOM 820 OD1 ASP 88 29.419 76.834 20.273 1.00 50.00 O ATOM 821 OD2 ASP 88 30.701 77.694 18.709 1.00 50.00 O ATOM 822 N PHE 89 27.216 77.257 21.590 1.00 50.00 N ATOM 823 CA PHE 89 25.425 76.721 21.521 1.00 50.00 C ATOM 824 C PHE 89 24.237 77.676 21.623 1.00 50.00 C ATOM 825 O PHE 89 23.289 77.586 20.850 1.00 50.00 O ATOM 826 H PHE 89 27.806 76.794 22.087 1.00 50.00 H ATOM 827 CB PHE 89 25.128 75.699 22.621 1.00 50.00 C ATOM 828 CG PHE 89 23.698 75.240 22.653 1.00 50.00 C ATOM 829 CZ PHE 89 21.052 74.395 22.717 1.00 50.00 C ATOM 830 CD1 PHE 89 23.243 74.286 21.759 1.00 50.00 C ATOM 831 CE1 PHE 89 21.928 73.863 21.789 1.00 50.00 C ATOM 832 CD2 PHE 89 22.810 75.761 23.576 1.00 50.00 C ATOM 833 CE2 PHE 89 21.494 75.339 23.605 1.00 50.00 C ATOM 834 N ASP 90 24.297 78.602 22.574 1.00 50.00 N ATOM 835 CA ASP 90 23.194 79.519 22.731 1.00 50.00 C ATOM 836 C ASP 90 23.189 80.513 21.577 1.00 50.00 C ATOM 837 O ASP 90 22.126 80.869 21.065 1.00 50.00 O ATOM 838 H ASP 90 25.013 78.663 23.116 1.00 50.00 H ATOM 839 CB ASP 90 23.285 80.243 24.075 1.00 50.00 C ATOM 840 CG ASP 90 22.982 79.333 25.250 1.00 50.00 C ATOM 841 OD1 ASP 90 22.441 78.230 25.023 1.00 50.00 O ATOM 842 OD2 ASP 90 23.286 79.722 26.397 1.00 50.00 O ATOM 843 N GLU 91 24.366 80.961 21.153 1.00 50.00 N ATOM 844 CA GLU 91 24.416 81.829 20.087 1.00 50.00 C ATOM 845 C GLU 91 23.937 81.153 18.805 1.00 50.00 C ATOM 846 O GLU 91 23.237 81.763 17.999 1.00 50.00 O ATOM 847 H GLU 91 25.128 80.702 21.558 1.00 50.00 H ATOM 848 CB GLU 91 25.835 82.367 19.898 1.00 50.00 C ATOM 849 CD GLU 91 27.364 83.977 18.695 1.00 50.00 C ATOM 850 CG GLU 91 25.968 83.395 18.787 1.00 50.00 C ATOM 851 OE1 GLU 91 28.317 83.203 18.462 1.00 50.00 O ATOM 852 OE2 GLU 91 27.506 85.207 18.854 1.00 50.00 O ATOM 853 N LEU 92 24.299 79.890 18.617 1.00 50.00 N ATOM 854 CA LEU 92 23.876 79.208 17.390 1.00 50.00 C ATOM 855 C LEU 92 22.379 78.942 17.506 1.00 50.00 C ATOM 856 O LEU 92 21.645 79.042 16.526 1.00 50.00 O ATOM 857 H LEU 92 24.796 79.452 19.227 1.00 50.00 H ATOM 858 CB LEU 92 24.673 77.916 17.192 1.00 50.00 C ATOM 859 CG LEU 92 24.362 77.116 15.926 1.00 50.00 C ATOM 860 CD1 LEU 92 24.621 77.954 14.683 1.00 50.00 C ATOM 861 CD2 LEU 92 25.186 75.837 15.883 1.00 50.00 C ATOM 862 N CYS 93 21.917 78.613 18.709 1.00 50.00 N ATOM 863 CA CYS 93 20.500 78.344 18.905 1.00 50.00 C ATOM 864 C CYS 93 19.674 79.618 18.791 1.00 50.00 C ATOM 865 O CYS 93 18.553 79.584 18.303 1.00 50.00 O ATOM 866 H CYS 93 22.487 78.557 19.404 1.00 50.00 H ATOM 867 CB CYS 93 20.263 77.688 20.267 1.00 50.00 C ATOM 868 SG CYS 93 20.607 78.761 21.682 1.00 50.00 S ATOM 869 N LEU 94 20.215 80.745 19.228 1.00 50.00 N ATOM 870 CA LEU 94 19.485 81.997 19.162 1.00 50.00 C ATOM 871 C LEU 94 19.151 82.374 17.724 1.00 50.00 C ATOM 872 O LEU 94 18.047 82.840 17.442 1.00 50.00 O ATOM 873 H LEU 94 21.047 80.727 19.570 1.00 50.00 H ATOM 874 CB LEU 94 20.289 83.120 19.821 1.00 50.00 C ATOM 875 CG LEU 94 19.631 84.502 19.841 1.00 50.00 C ATOM 876 CD1 LEU 94 18.317 84.461 20.606 1.00 50.00 C ATOM 877 CD2 LEU 94 20.566 85.535 20.451 1.00 50.00 C ATOM 878 N LYS 95 20.091 82.169 16.806 1.00 50.00 N ATOM 879 CA LYS 95 19.841 82.423 15.404 1.00 50.00 C ATOM 880 C LYS 95 18.719 81.531 14.880 1.00 50.00 C ATOM 881 O LYS 95 17.861 81.982 14.123 1.00 50.00 O ATOM 882 H LYS 95 20.896 81.865 17.072 1.00 50.00 H ATOM 883 CB LYS 95 21.114 82.205 14.584 1.00 50.00 C ATOM 884 CD LYS 95 20.683 83.946 12.828 1.00 50.00 C ATOM 885 CE LYS 95 20.643 84.237 11.338 1.00 50.00 C ATOM 886 CG LYS 95 20.950 82.474 13.098 1.00 50.00 C ATOM 887 HZ1 LYS 95 20.307 85.799 10.179 1.00 50.00 H ATOM 888 HZ2 LYS 95 20.944 86.185 11.426 1.00 50.00 H ATOM 889 HZ3 LYS 95 19.527 85.863 11.403 1.00 50.00 H ATOM 890 NZ LYS 95 20.323 85.664 11.058 1.00 50.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.64 52.6 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 76.00 51.8 56 100.0 56 ARMSMC BURIED . . . . . . . . 63.27 54.5 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.86 52.8 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 78.91 51.4 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 68.88 56.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 95.17 45.5 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.41 26.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 75.35 29.4 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 93.87 16.7 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 51.20 60.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 34.72 66.7 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 32.56 75.0 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 37.12 71.4 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 24.51 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.03 40.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 74.03 40.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 70.44 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 86.90 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.40 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.40 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0600 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.64 29 100.0 29 CRMSCA BURIED . . . . . . . . 1.60 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.52 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.77 142 100.0 142 CRMSMC BURIED . . . . . . . . 1.75 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.55 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 4.27 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 4.90 103 100.0 103 CRMSSC BURIED . . . . . . . . 3.47 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.54 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.82 219 100.0 219 CRMSALL BURIED . . . . . . . . 2.64 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.010 0.925 0.928 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 47.779 0.916 0.921 29 100.0 29 ERRCA BURIED . . . . . . . . 48.617 0.947 0.948 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 47.918 0.921 0.926 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 47.681 0.913 0.918 142 100.0 142 ERRMC BURIED . . . . . . . . 48.530 0.944 0.946 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 46.207 0.863 0.875 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 46.454 0.871 0.882 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 45.758 0.847 0.861 103 100.0 103 ERRSC BURIED . . . . . . . . 47.361 0.903 0.910 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 47.190 0.897 0.904 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 46.862 0.885 0.893 219 100.0 219 ERRALL BURIED . . . . . . . . 48.045 0.927 0.931 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 24 33 37 40 40 40 DISTCA CA (P) 25.00 60.00 82.50 92.50 100.00 40 DISTCA CA (RMS) 0.70 1.34 1.64 1.89 2.40 DISTCA ALL (N) 54 131 200 257 301 303 303 DISTALL ALL (P) 17.82 43.23 66.01 84.82 99.34 303 DISTALL ALL (RMS) 0.70 1.27 1.74 2.34 3.44 DISTALL END of the results output