####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS275_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS275_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 103 - 113 4.70 56.11 LONGEST_CONTINUOUS_SEGMENT: 11 104 - 114 4.88 55.38 LCS_AVERAGE: 21.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 107 - 113 1.99 55.37 LONGEST_CONTINUOUS_SEGMENT: 7 108 - 114 1.85 54.31 LCS_AVERAGE: 11.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 100 - 104 0.93 67.73 LONGEST_CONTINUOUS_SEGMENT: 5 109 - 113 0.95 53.65 LONGEST_CONTINUOUS_SEGMENT: 5 110 - 114 0.72 53.10 LONGEST_CONTINUOUS_SEGMENT: 5 116 - 120 0.81 41.08 LCS_AVERAGE: 8.59 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 3 10 3 3 3 3 3 3 4 4 6 7 9 9 9 10 10 10 11 11 12 12 LCS_GDT A 97 A 97 3 5 10 3 3 3 4 4 5 5 5 6 7 9 9 9 10 10 10 11 11 12 12 LCS_GDT R 98 R 98 3 5 10 3 3 3 4 4 5 5 5 7 7 9 9 9 10 10 10 11 11 12 12 LCS_GDT G 99 G 99 3 6 10 3 3 3 4 6 6 7 7 7 8 9 9 10 10 10 10 11 12 12 12 LCS_GDT W 100 W 100 5 6 10 3 3 5 5 6 6 7 7 7 8 9 9 10 10 10 10 11 12 12 12 LCS_GDT E 101 E 101 5 6 10 4 4 5 5 6 6 7 7 7 8 9 9 10 10 10 11 11 12 12 12 LCS_GDT C 102 C 102 5 6 10 4 4 5 5 6 6 7 7 7 8 9 9 10 10 10 11 11 12 12 12 LCS_GDT T 103 T 103 5 6 11 4 4 5 5 6 6 7 7 8 8 9 9 10 10 10 11 11 12 12 12 LCS_GDT K 104 K 104 5 6 11 4 4 5 5 6 6 7 7 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT D 105 D 105 3 6 11 3 3 3 5 5 6 7 7 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT R 106 R 106 3 4 11 3 3 3 3 4 4 6 7 8 8 10 10 10 10 11 11 11 12 12 12 LCS_GDT C 107 C 107 4 7 11 3 4 4 5 6 7 7 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT G 108 G 108 4 7 11 3 4 4 5 6 7 7 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT E 109 E 109 5 7 11 3 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT V 110 V 110 5 7 11 4 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT R 111 R 111 5 7 11 4 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 11 12 12 LCS_GDT N 112 N 112 5 7 11 4 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 11 12 12 LCS_GDT E 113 E 113 5 7 11 4 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 11 12 12 LCS_GDT E 114 E 114 5 7 11 3 4 5 5 6 7 7 8 8 8 8 8 9 9 11 11 11 11 12 12 LCS_GDT N 115 N 115 4 4 10 3 4 4 4 4 5 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT A 116 A 116 5 6 10 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT C 117 C 117 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT H 118 H 118 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT C 119 C 119 5 6 9 4 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT S 120 S 120 5 6 9 3 4 5 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT E 121 E 121 3 6 9 3 3 4 5 6 6 6 7 8 8 8 8 8 9 9 10 10 11 11 11 LCS_GDT D 122 D 122 3 4 9 3 3 3 4 4 5 6 7 7 7 7 8 8 9 9 10 10 11 11 11 LCS_GDT C 123 C 123 3 4 9 3 3 3 3 4 4 5 6 6 7 7 7 7 9 9 10 10 11 11 11 LCS_GDT L 124 L 124 3 4 9 3 3 3 3 4 4 5 6 6 7 7 7 7 9 9 10 10 11 11 11 LCS_GDT S 125 S 125 3 4 9 1 3 3 3 4 5 6 7 8 8 8 8 8 8 8 10 10 11 11 11 LCS_GDT R 126 R 126 3 6 10 0 3 5 5 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT G 127 G 127 4 6 10 0 4 5 5 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT D 128 D 128 4 6 10 3 4 5 5 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT C 129 C 129 4 6 10 3 4 5 5 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT C 130 C 130 4 6 10 3 4 5 5 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT T 131 T 131 3 6 10 0 3 3 4 5 6 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT N 132 N 132 3 5 10 0 3 3 4 5 5 7 7 8 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT Y 133 Y 133 3 4 10 1 3 3 4 4 4 5 6 6 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT Q 134 Q 134 3 4 10 0 3 3 4 4 4 5 6 6 8 8 8 8 10 10 10 11 11 11 11 LCS_GDT V 135 V 135 3 3 10 0 3 3 3 3 4 5 6 6 8 8 8 9 10 10 10 11 11 11 11 LCS_GDT V 136 V 136 3 3 9 2 3 3 3 3 4 4 4 6 6 7 7 8 9 9 10 11 11 11 11 LCS_GDT C 137 C 137 3 4 8 0 3 3 4 4 4 4 4 5 6 7 7 8 8 9 9 10 10 10 11 LCS_GDT K 138 K 138 3 4 8 2 3 3 4 4 4 4 4 5 5 5 6 8 8 9 9 10 10 10 11 LCS_GDT G 139 G 139 3 4 7 0 3 3 4 4 4 4 4 5 5 5 5 7 7 9 9 10 10 10 10 LCS_GDT E 140 E 140 3 4 6 0 3 3 4 4 4 4 4 5 5 5 5 5 5 5 5 7 8 8 8 LCS_AVERAGE LCS_A: 14.11 ( 8.59 11.95 21.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 5 6 7 7 8 8 9 10 10 10 10 11 11 11 12 12 12 GDT PERCENT_AT 8.89 8.89 11.11 11.11 13.33 15.56 15.56 17.78 17.78 20.00 22.22 22.22 22.22 22.22 24.44 24.44 24.44 26.67 26.67 26.67 GDT RMS_LOCAL 0.21 0.21 0.72 0.72 1.32 1.85 1.85 2.34 2.34 3.89 4.15 4.15 4.15 4.15 4.88 4.70 4.70 5.98 5.85 5.60 GDT RMS_ALL_AT 69.31 69.31 53.10 53.10 53.35 54.31 54.31 54.89 54.89 55.22 55.65 55.65 55.65 55.65 55.38 56.11 56.11 61.20 64.24 55.70 # Checking swapping # possible swapping detected: D 105 D 105 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 55.169 0 0.699 0.852 56.783 0.000 0.000 LGA A 97 A 97 50.372 0 0.145 0.138 52.090 0.000 0.000 LGA R 98 R 98 43.851 0 0.706 1.322 46.314 0.000 0.000 LGA G 99 G 99 40.648 0 0.219 0.219 41.998 0.000 0.000 LGA W 100 W 100 36.848 0 0.700 1.219 44.410 0.000 0.000 LGA E 101 E 101 31.006 0 0.034 1.284 33.434 0.000 0.000 LGA C 102 C 102 24.830 0 0.033 0.136 26.679 0.000 0.000 LGA T 103 T 103 21.138 0 0.064 1.258 24.432 0.000 0.000 LGA K 104 K 104 14.144 0 0.634 1.362 16.735 0.000 0.317 LGA D 105 D 105 12.484 0 0.703 0.821 14.299 0.000 0.000 LGA R 106 R 106 10.407 0 0.258 1.070 14.240 2.976 1.082 LGA C 107 C 107 3.843 0 0.246 0.288 5.967 41.310 50.476 LGA G 108 G 108 1.975 0 0.658 0.658 3.430 65.357 65.357 LGA E 109 E 109 2.164 0 0.043 0.854 6.665 79.524 56.931 LGA V 110 V 110 1.944 0 0.078 0.093 3.452 68.810 62.789 LGA R 111 R 111 1.292 0 0.088 1.176 4.642 81.429 66.710 LGA N 112 N 112 0.960 0 0.137 1.367 3.454 83.690 74.702 LGA E 113 E 113 1.541 0 0.700 0.976 4.260 64.048 68.042 LGA E 114 E 114 3.448 0 0.704 1.106 7.577 32.857 35.344 LGA N 115 N 115 10.808 0 0.067 0.179 12.400 1.190 0.595 LGA A 116 A 116 14.733 0 0.606 0.602 17.531 0.000 0.000 LGA C 117 C 117 20.887 0 0.084 0.731 24.932 0.000 0.000 LGA H 118 H 118 25.421 0 0.064 1.243 29.333 0.000 0.000 LGA C 119 C 119 32.022 0 0.609 0.892 34.334 0.000 0.000 LGA S 120 S 120 35.121 0 0.045 0.156 37.855 0.000 0.000 LGA E 121 E 121 41.314 0 0.685 1.204 47.524 0.000 0.000 LGA D 122 D 122 41.993 0 0.643 1.090 42.701 0.000 0.000 LGA C 123 C 123 44.135 0 0.659 0.631 45.917 0.000 0.000 LGA L 124 L 124 50.097 0 0.616 1.012 52.151 0.000 0.000 LGA S 125 S 125 52.016 0 0.714 0.820 52.173 0.000 0.000 LGA R 126 R 126 52.316 0 0.705 0.660 53.893 0.000 0.000 LGA G 127 G 127 57.681 0 0.460 0.460 57.681 0.000 0.000 LGA D 128 D 128 56.929 0 0.368 1.082 58.979 0.000 0.000 LGA C 129 C 129 63.546 0 0.046 0.802 67.483 0.000 0.000 LGA C 130 C 130 66.870 0 0.036 0.101 70.151 0.000 0.000 LGA T 131 T 131 72.911 0 0.688 1.406 76.095 0.000 0.000 LGA N 132 N 132 78.470 0 0.655 0.532 81.458 0.000 0.000 LGA Y 133 Y 133 82.122 0 0.589 1.125 87.670 0.000 0.000 LGA Q 134 Q 134 88.668 0 0.665 0.709 92.324 0.000 0.000 LGA V 135 V 135 93.523 0 0.596 0.621 95.326 0.000 0.000 LGA V 136 V 136 95.681 0 0.654 1.470 98.127 0.000 0.000 LGA C 137 C 137 99.251 0 0.695 0.623 101.956 0.000 0.000 LGA K 138 K 138 105.348 0 0.651 1.165 108.494 0.000 0.000 LGA G 139 G 139 111.449 0 0.699 0.699 113.404 0.000 0.000 LGA E 140 E 140 114.203 0 0.091 0.935 115.286 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 38.269 38.280 38.500 11.582 10.719 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 8 2.34 15.556 15.249 0.327 LGA_LOCAL RMSD: 2.345 Number of atoms: 8 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 54.886 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 38.269 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.210562 * X + 0.535783 * Y + 0.817680 * Z + 91.543304 Y_new = 0.948281 * X + 0.091302 * Y + -0.304018 * Z + 100.585892 Z_new = -0.237544 * X + 0.839405 * Y + -0.488848 * Z + 123.184578 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.352296 0.239836 2.098155 [DEG: 77.4808 13.7416 120.2154 ] ZXZ: 1.214829 2.081565 -0.275780 [DEG: 69.6046 119.2649 -15.8010 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS275_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS275_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 8 2.34 15.249 38.27 REMARK ---------------------------------------------------------- MOLECULE T0543TS275_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsoA ATOM 728 N THR 96 -13.515 85.032 -28.938 1.00 10.33 N ATOM 729 CA THR 96 -13.143 85.668 -27.710 1.00 10.33 C ATOM 730 CB THR 96 -14.025 85.304 -26.553 1.00 10.33 C ATOM 731 OG1 THR 96 -13.704 86.103 -25.423 1.00 10.33 O ATOM 732 CG2 THR 96 -13.823 83.814 -26.229 1.00 10.33 C ATOM 733 C THR 96 -11.757 85.240 -27.356 1.00 10.33 C ATOM 734 O THR 96 -11.338 84.124 -27.660 1.00 10.33 O ATOM 735 N ALA 97 -11.000 86.148 -26.708 1.00 10.29 N ATOM 736 CA ALA 97 -9.679 85.827 -26.258 1.00 10.29 C ATOM 737 CB ALA 97 -8.568 86.322 -27.198 1.00 10.29 C ATOM 738 C ALA 97 -9.508 86.538 -24.957 1.00 10.29 C ATOM 739 O ALA 97 -10.055 87.623 -24.764 1.00 10.29 O ATOM 740 N ARG 98 -8.759 85.939 -24.012 1.00 11.06 N ATOM 741 CA ARG 98 -8.598 86.614 -22.760 1.00 11.06 C ATOM 742 CB ARG 98 -9.844 86.515 -21.861 1.00 11.06 C ATOM 743 CG ARG 98 -9.754 87.328 -20.568 1.00 11.06 C ATOM 744 CD ARG 98 -9.514 86.475 -19.322 1.00 11.06 C ATOM 745 NE ARG 98 -10.707 85.598 -19.155 1.00 11.06 N ATOM 746 CZ ARG 98 -11.818 86.074 -18.521 1.00 11.06 C ATOM 747 NH1 ARG 98 -11.839 87.355 -18.052 1.00 11.06 H ATOM 748 NH2 ARG 98 -12.911 85.271 -18.362 1.00 11.06 H ATOM 749 C ARG 98 -7.447 85.991 -22.037 1.00 11.06 C ATOM 750 O ARG 98 -6.898 84.979 -22.467 1.00 11.06 O ATOM 751 N GLY 99 -7.042 86.616 -20.914 1.00 10.98 N ATOM 752 CA GLY 99 -5.980 86.101 -20.103 1.00 10.98 C ATOM 753 C GLY 99 -4.759 86.927 -20.344 1.00 10.98 C ATOM 754 O GLY 99 -4.447 87.288 -21.477 1.00 10.98 O ATOM 755 N TRP 100 -4.033 87.241 -19.252 1.00 10.75 N ATOM 756 CA TRP 100 -2.826 88.004 -19.354 1.00 10.75 C ATOM 757 CB TRP 100 -2.997 89.481 -18.958 1.00 10.75 C ATOM 758 CG TRP 100 -1.735 90.303 -19.072 1.00 10.75 C ATOM 759 CD2 TRP 100 -1.332 90.978 -20.274 1.00 10.75 C ATOM 760 CD1 TRP 100 -0.776 90.566 -18.139 1.00 10.75 C ATOM 761 NE1 TRP 100 0.203 91.362 -18.685 1.00 10.75 N ATOM 762 CE2 TRP 100 -0.127 91.624 -19.998 1.00 10.75 C ATOM 763 CE3 TRP 100 -1.918 91.053 -21.505 1.00 10.75 C ATOM 764 CZ2 TRP 100 0.513 92.358 -20.956 1.00 10.75 C ATOM 765 CZ3 TRP 100 -1.270 91.794 -22.468 1.00 10.75 C ATOM 766 CH2 TRP 100 -0.078 92.435 -22.198 1.00 10.75 H ATOM 767 C TRP 100 -1.864 87.389 -18.391 1.00 10.75 C ATOM 768 O TRP 100 -2.269 86.668 -17.480 1.00 10.75 O ATOM 769 N GLU 101 -0.554 87.638 -18.576 1.00 9.63 N ATOM 770 CA GLU 101 0.396 87.054 -17.676 1.00 9.63 C ATOM 771 CB GLU 101 1.475 86.215 -18.383 1.00 9.63 C ATOM 772 CG GLU 101 2.444 85.526 -17.421 1.00 9.63 C ATOM 773 CD GLU 101 1.705 84.369 -16.762 1.00 9.63 C ATOM 774 OE1 GLU 101 0.507 84.167 -17.092 1.00 9.63 O ATOM 775 OE2 GLU 101 2.331 83.670 -15.920 1.00 9.63 O ATOM 776 C GLU 101 1.096 88.159 -16.957 1.00 9.63 C ATOM 777 O GLU 101 1.504 89.149 -17.561 1.00 9.63 O ATOM 778 N CYS 102 1.232 88.019 -15.624 1.00 10.51 N ATOM 779 CA CYS 102 1.926 89.009 -14.856 1.00 10.51 C ATOM 780 CB CYS 102 0.996 89.910 -14.025 1.00 10.51 C ATOM 781 SG CYS 102 -0.084 90.938 -15.065 1.00 10.51 S ATOM 782 C CYS 102 2.801 88.275 -13.894 1.00 10.51 C ATOM 783 O CYS 102 2.480 87.163 -13.474 1.00 10.51 O ATOM 784 N THR 103 3.953 88.873 -13.535 1.00 11.45 N ATOM 785 CA THR 103 4.826 88.226 -12.602 1.00 11.45 C ATOM 786 CB THR 103 6.130 87.794 -13.203 1.00 11.45 C ATOM 787 OG1 THR 103 6.879 87.037 -12.263 1.00 11.45 O ATOM 788 CG2 THR 103 6.915 89.047 -13.628 1.00 11.45 C ATOM 789 C THR 103 5.142 89.201 -11.517 1.00 11.45 C ATOM 790 O THR 103 5.342 90.388 -11.773 1.00 11.45 O ATOM 791 N LYS 104 5.172 88.717 -10.259 1.00 10.95 N ATOM 792 CA LYS 104 5.501 89.572 -9.159 1.00 10.95 C ATOM 793 CB LYS 104 4.275 90.174 -8.452 1.00 10.95 C ATOM 794 CG LYS 104 4.635 91.108 -7.295 1.00 10.95 C ATOM 795 CD LYS 104 5.325 92.397 -7.745 1.00 10.95 C ATOM 796 CE LYS 104 4.388 93.378 -8.455 1.00 10.95 C ATOM 797 NZ LYS 104 5.134 94.592 -8.854 1.00 10.95 N ATOM 798 C LYS 104 6.221 88.738 -8.150 1.00 10.95 C ATOM 799 O LYS 104 6.061 87.519 -8.112 1.00 10.95 O ATOM 800 N ASP 105 7.058 89.381 -7.313 1.00 12.11 N ATOM 801 CA ASP 105 7.752 88.656 -6.292 1.00 12.11 C ATOM 802 CB ASP 105 9.159 89.199 -5.981 1.00 12.11 C ATOM 803 CG ASP 105 9.021 90.614 -5.438 1.00 12.11 C ATOM 804 OD1 ASP 105 8.124 91.351 -5.929 1.00 12.11 O ATOM 805 OD2 ASP 105 9.806 90.975 -4.522 1.00 12.11 O ATOM 806 C ASP 105 6.938 88.787 -5.050 1.00 12.11 C ATOM 807 O ASP 105 6.441 89.867 -4.736 1.00 12.11 O ATOM 808 N ARG 106 6.755 87.675 -4.312 1.00 11.20 N ATOM 809 CA ARG 106 5.956 87.767 -3.129 1.00 11.20 C ATOM 810 CB ARG 106 5.877 86.436 -2.362 1.00 11.20 C ATOM 811 CG ARG 106 5.177 85.311 -3.125 1.00 11.20 C ATOM 812 CD ARG 106 5.128 83.996 -2.346 1.00 11.20 C ATOM 813 NE ARG 106 6.534 83.535 -2.163 1.00 11.20 N ATOM 814 CZ ARG 106 6.829 82.586 -1.228 1.00 11.20 C ATOM 815 NH1 ARG 106 5.837 82.056 -0.455 1.00 11.20 H ATOM 816 NH2 ARG 106 8.119 82.167 -1.064 1.00 11.20 H ATOM 817 C ARG 106 6.621 88.745 -2.220 1.00 11.20 C ATOM 818 O ARG 106 6.007 89.718 -1.785 1.00 11.20 O ATOM 819 N CYS 107 7.921 88.523 -1.950 1.00 12.16 N ATOM 820 CA CYS 107 8.661 89.384 -1.074 1.00 12.16 C ATOM 821 CB CYS 107 8.411 89.130 0.425 1.00 12.16 C ATOM 822 SG CYS 107 6.732 89.555 0.979 1.00 12.16 S ATOM 823 C CYS 107 10.105 89.081 -1.291 1.00 12.16 C ATOM 824 O CYS 107 10.473 88.354 -2.213 1.00 12.16 O ATOM 825 N GLY 108 10.967 89.659 -0.434 1.00 12.08 N ATOM 826 CA GLY 108 12.369 89.387 -0.512 1.00 12.08 C ATOM 827 C GLY 108 12.763 88.916 0.849 1.00 12.08 C ATOM 828 O GLY 108 12.285 89.437 1.856 1.00 12.08 O ATOM 829 N GLU 109 13.654 87.911 0.919 1.00 11.03 N ATOM 830 CA GLU 109 14.023 87.412 2.209 1.00 11.03 C ATOM 831 CB GLU 109 13.561 85.967 2.464 1.00 11.03 C ATOM 832 CG GLU 109 13.932 85.433 3.849 1.00 11.03 C ATOM 833 CD GLU 109 13.405 84.009 3.958 1.00 11.03 C ATOM 834 OE1 GLU 109 12.799 83.526 2.965 1.00 11.03 O ATOM 835 OE2 GLU 109 13.592 83.388 5.039 1.00 11.03 O ATOM 836 C GLU 109 15.511 87.428 2.310 1.00 11.03 C ATOM 837 O GLU 109 16.216 87.225 1.323 1.00 11.03 O ATOM 838 N VAL 110 16.017 87.702 3.527 1.00 12.80 N ATOM 839 CA VAL 110 17.428 87.703 3.762 1.00 12.80 C ATOM 840 CB VAL 110 17.994 89.067 4.036 1.00 12.80 C ATOM 841 CG1 VAL 110 17.355 89.612 5.324 1.00 12.80 C ATOM 842 CG2 VAL 110 19.526 88.955 4.107 1.00 12.80 C ATOM 843 C VAL 110 17.648 86.878 4.984 1.00 12.80 C ATOM 844 O VAL 110 16.756 86.743 5.821 1.00 12.80 O ATOM 845 N ARG 111 18.847 86.278 5.111 1.00 10.86 N ATOM 846 CA ARG 111 19.107 85.468 6.261 1.00 10.86 C ATOM 847 CB ARG 111 19.549 84.036 5.915 1.00 10.86 C ATOM 848 CG ARG 111 19.702 83.131 7.138 1.00 10.86 C ATOM 849 CD ARG 111 18.367 82.754 7.783 1.00 10.86 C ATOM 850 NE ARG 111 17.730 81.720 6.919 1.00 10.86 N ATOM 851 CZ ARG 111 16.943 82.094 5.869 1.00 10.86 C ATOM 852 NH1 ARG 111 16.739 83.417 5.604 1.00 10.86 H ATOM 853 NH2 ARG 111 16.361 81.143 5.080 1.00 10.86 H ATOM 854 C ARG 111 20.227 86.106 7.011 1.00 10.86 C ATOM 855 O ARG 111 21.166 86.635 6.417 1.00 10.86 O ATOM 856 N ASN 112 20.136 86.091 8.355 1.00 11.50 N ATOM 857 CA ASN 112 21.168 86.662 9.165 1.00 11.50 C ATOM 858 CB ASN 112 20.672 87.770 10.110 1.00 11.50 C ATOM 859 CG ASN 112 20.303 88.983 9.268 1.00 11.50 C ATOM 860 OD1 ASN 112 21.072 89.409 8.407 1.00 11.50 O ATOM 861 ND2 ASN 112 19.095 89.556 9.514 1.00 11.50 N ATOM 862 C ASN 112 21.704 85.560 10.012 1.00 11.50 C ATOM 863 O ASN 112 20.981 84.635 10.376 1.00 11.50 O ATOM 864 N GLU 113 23.010 85.620 10.330 1.00 10.30 N ATOM 865 CA GLU 113 23.590 84.588 11.131 1.00 10.30 C ATOM 866 CB GLU 113 24.795 83.897 10.472 1.00 10.30 C ATOM 867 CG GLU 113 24.419 83.087 9.230 1.00 10.30 C ATOM 868 CD GLU 113 25.690 82.455 8.680 1.00 10.30 C ATOM 869 OE1 GLU 113 26.761 82.639 9.315 1.00 10.30 O ATOM 870 OE2 GLU 113 25.607 81.780 7.619 1.00 10.30 O ATOM 871 C GLU 113 24.065 85.213 12.400 1.00 10.30 C ATOM 872 O GLU 113 24.444 86.382 12.428 1.00 10.30 O ATOM 873 N GLU 114 24.027 84.436 13.500 1.00 10.30 N ATOM 874 CA GLU 114 24.460 84.918 14.778 1.00 10.30 C ATOM 875 CB GLU 114 23.967 84.058 15.955 1.00 10.30 C ATOM 876 CG GLU 114 24.410 84.569 17.328 1.00 10.30 C ATOM 877 CD GLU 114 23.494 85.719 17.717 1.00 10.30 C ATOM 878 OE1 GLU 114 22.591 86.058 16.906 1.00 10.30 O ATOM 879 OE2 GLU 114 23.684 86.274 18.833 1.00 10.30 O ATOM 880 C GLU 114 25.952 84.880 14.793 1.00 10.30 C ATOM 881 O GLU 114 26.572 84.103 14.070 1.00 10.30 O ATOM 882 N ASN 115 26.567 85.749 15.618 1.00 10.84 N ATOM 883 CA ASN 115 27.993 85.772 15.727 1.00 10.84 C ATOM 884 CB ASN 115 28.599 87.184 15.634 1.00 10.84 C ATOM 885 CG ASN 115 28.391 87.697 14.216 1.00 10.84 C ATOM 886 OD1 ASN 115 28.354 86.925 13.260 1.00 10.84 O ATOM 887 ND2 ASN 115 28.253 89.043 14.073 1.00 10.84 N ATOM 888 C ASN 115 28.318 85.242 17.083 1.00 10.84 C ATOM 889 O ASN 115 27.549 85.417 18.027 1.00 10.84 O ATOM 890 N ALA 116 29.465 84.550 17.211 1.00 11.81 N ATOM 891 CA ALA 116 29.816 84.010 18.490 1.00 11.81 C ATOM 892 CB ALA 116 30.150 82.510 18.457 1.00 11.81 C ATOM 893 C ALA 116 31.036 84.724 18.965 1.00 11.81 C ATOM 894 O ALA 116 31.921 85.061 18.178 1.00 11.81 O ATOM 895 N CYS 117 31.097 84.993 20.283 1.00 11.44 N ATOM 896 CA CYS 117 32.238 85.655 20.841 1.00 11.44 C ATOM 897 CB CYS 117 31.883 86.884 21.697 1.00 11.44 C ATOM 898 SG CYS 117 33.354 87.700 22.387 1.00 11.44 S ATOM 899 C CYS 117 32.904 84.668 21.740 1.00 11.44 C ATOM 900 O CYS 117 32.258 83.775 22.288 1.00 11.44 O ATOM 901 N HIS 118 34.235 84.791 21.898 1.00 14.55 N ATOM 902 CA HIS 118 34.934 83.874 22.748 1.00 14.55 C ATOM 903 ND1 HIS 118 36.145 80.771 23.225 1.00 14.55 N ATOM 904 CG HIS 118 36.648 82.005 22.875 1.00 14.55 C ATOM 905 CB HIS 118 35.933 82.984 21.990 1.00 14.55 C ATOM 906 NE2 HIS 118 38.132 80.950 24.207 1.00 14.55 N ATOM 907 CD2 HIS 118 37.862 82.098 23.484 1.00 14.55 C ATOM 908 CE1 HIS 118 37.073 80.184 24.022 1.00 14.55 C ATOM 909 C HIS 118 35.715 84.676 23.733 1.00 14.55 C ATOM 910 O HIS 118 36.254 85.730 23.408 1.00 14.55 O ATOM 911 N CYS 119 35.773 84.193 24.989 1.00 12.76 N ATOM 912 CA CYS 119 36.525 84.865 26.005 1.00 12.76 C ATOM 913 CB CYS 119 35.672 85.358 27.186 1.00 12.76 C ATOM 914 SG CYS 119 36.663 86.211 28.451 1.00 12.76 S ATOM 915 C CYS 119 37.498 83.870 26.545 1.00 12.76 C ATOM 916 O CYS 119 37.276 82.666 26.454 1.00 12.76 O ATOM 917 N SER 120 38.620 84.352 27.109 1.00 13.73 N ATOM 918 CA SER 120 39.584 83.436 27.639 1.00 13.73 C ATOM 919 CB SER 120 40.857 83.328 26.785 1.00 13.73 C ATOM 920 OG SER 120 41.532 84.578 26.761 1.00 13.73 O ATOM 921 C SER 120 40.000 83.930 28.987 1.00 13.73 C ATOM 922 O SER 120 39.952 85.127 29.266 1.00 13.73 O ATOM 923 N GLU 121 40.398 82.994 29.869 1.00 11.59 N ATOM 924 CA GLU 121 40.851 83.368 31.175 1.00 11.59 C ATOM 925 CB GLU 121 39.900 82.944 32.307 1.00 11.59 C ATOM 926 CG GLU 121 40.394 83.353 33.695 1.00 11.59 C ATOM 927 CD GLU 121 39.376 82.874 34.720 1.00 11.59 C ATOM 928 OE1 GLU 121 38.375 82.231 34.307 1.00 11.59 O ATOM 929 OE2 GLU 121 39.590 83.141 35.933 1.00 11.59 O ATOM 930 C GLU 121 42.149 82.667 31.417 1.00 11.59 C ATOM 931 O GLU 121 42.341 81.528 30.995 1.00 11.59 O ATOM 932 N ASP 122 43.090 83.354 32.091 1.00 14.48 N ATOM 933 CA ASP 122 44.353 82.748 32.391 1.00 14.48 C ATOM 934 CB ASP 122 45.552 83.474 31.759 1.00 14.48 C ATOM 935 CG ASP 122 45.493 83.252 30.254 1.00 14.48 C ATOM 936 OD1 ASP 122 44.644 82.431 29.813 1.00 14.48 O ATOM 937 OD2 ASP 122 46.296 83.894 29.526 1.00 14.48 O ATOM 938 C ASP 122 44.533 82.799 33.872 1.00 14.48 C ATOM 939 O ASP 122 44.277 83.825 34.501 1.00 14.48 O ATOM 940 N CYS 123 44.961 81.673 34.475 1.00 13.60 N ATOM 941 CA CYS 123 45.175 81.660 35.892 1.00 13.60 C ATOM 942 CB CYS 123 44.390 80.559 36.623 1.00 13.60 C ATOM 943 SG CYS 123 44.883 78.891 36.093 1.00 13.60 S ATOM 944 C CYS 123 46.626 81.391 36.124 1.00 13.60 C ATOM 945 O CYS 123 47.222 80.539 35.465 1.00 13.60 O ATOM 946 N LEU 124 47.240 82.137 37.062 1.00 14.11 N ATOM 947 CA LEU 124 48.628 81.926 37.343 1.00 14.11 C ATOM 948 CB LEU 124 49.532 83.068 36.848 1.00 14.11 C ATOM 949 CG LEU 124 49.514 83.249 35.318 1.00 14.11 C ATOM 950 CD1 LEU 124 48.119 83.658 34.817 1.00 14.11 C ATOM 951 CD2 LEU 124 50.620 84.213 34.859 1.00 14.11 C ATOM 952 C LEU 124 48.793 81.843 38.826 1.00 14.11 C ATOM 953 O LEU 124 48.124 82.556 39.575 1.00 14.11 O ATOM 954 N SER 125 49.681 80.943 39.290 1.00 15.00 N ATOM 955 CA SER 125 49.949 80.831 40.693 1.00 15.00 C ATOM 956 CB SER 125 49.320 79.587 41.348 1.00 15.00 C ATOM 957 OG SER 125 49.634 79.557 42.733 1.00 15.00 O ATOM 958 C SER 125 51.432 80.699 40.828 1.00 15.00 C ATOM 959 O SER 125 52.089 80.134 39.957 1.00 15.00 O ATOM 960 N ARG 126 52.011 81.242 41.918 1.00 15.00 N ATOM 961 CA ARG 126 53.432 81.127 42.061 1.00 15.00 C ATOM 962 CB ARG 126 54.205 82.203 41.281 1.00 15.00 C ATOM 963 CG ARG 126 54.001 82.128 39.767 1.00 15.00 C ATOM 964 CD ARG 126 54.774 83.196 38.992 1.00 15.00 C ATOM 965 NE ARG 126 54.481 82.994 37.545 1.00 15.00 N ATOM 966 CZ ARG 126 55.157 83.715 36.605 1.00 15.00 C ATOM 967 NH1 ARG 126 56.108 84.617 36.987 1.00 15.00 H ATOM 968 NH2 ARG 126 54.875 83.540 35.281 1.00 15.00 H ATOM 969 C ARG 126 53.786 81.304 43.502 1.00 15.00 C ATOM 970 O ARG 126 52.999 81.817 44.297 1.00 15.00 O ATOM 971 N GLY 127 55.002 80.853 43.869 1.00 15.00 N ATOM 972 CA GLY 127 55.518 81.024 45.196 1.00 15.00 C ATOM 973 C GLY 127 55.316 79.762 45.968 1.00 15.00 C ATOM 974 O GLY 127 54.206 79.240 46.056 1.00 15.00 O ATOM 975 N ASP 128 56.413 79.240 46.555 1.00 15.00 N ATOM 976 CA ASP 128 56.319 78.071 47.378 1.00 15.00 C ATOM 977 CB ASP 128 55.733 76.851 46.648 1.00 15.00 C ATOM 978 CG ASP 128 55.522 75.735 47.664 1.00 15.00 C ATOM 979 OD1 ASP 128 55.902 75.928 48.850 1.00 15.00 O ATOM 980 OD2 ASP 128 54.971 74.673 47.266 1.00 15.00 O ATOM 981 C ASP 128 57.708 77.707 47.796 1.00 15.00 C ATOM 982 O ASP 128 58.366 76.906 47.134 1.00 15.00 O ATOM 983 N CYS 129 58.203 78.292 48.906 1.00 15.00 N ATOM 984 CA CYS 129 59.529 77.934 49.320 1.00 15.00 C ATOM 985 CB CYS 129 60.614 78.893 48.801 1.00 15.00 C ATOM 986 SG CYS 129 62.281 78.413 49.344 1.00 15.00 S ATOM 987 C CYS 129 59.586 77.978 50.813 1.00 15.00 C ATOM 988 O CYS 129 58.926 78.800 51.448 1.00 15.00 O ATOM 989 N CYS 130 60.374 77.062 51.414 1.00 15.00 N ATOM 990 CA CYS 130 60.540 77.062 52.837 1.00 15.00 C ATOM 991 CB CYS 130 59.475 76.241 53.584 1.00 15.00 C ATOM 992 SG CYS 130 57.809 76.946 53.408 1.00 15.00 S ATOM 993 C CYS 130 61.866 76.435 53.127 1.00 15.00 C ATOM 994 O CYS 130 62.328 75.570 52.385 1.00 15.00 O ATOM 995 N THR 131 62.529 76.878 54.214 1.00 15.00 N ATOM 996 CA THR 131 63.793 76.298 54.565 1.00 15.00 C ATOM 997 CB THR 131 64.971 77.161 54.220 1.00 15.00 C ATOM 998 OG1 THR 131 66.181 76.447 54.428 1.00 15.00 O ATOM 999 CG2 THR 131 64.937 78.419 55.103 1.00 15.00 C ATOM 1000 C THR 131 63.810 76.101 56.046 1.00 15.00 C ATOM 1001 O THR 131 63.090 76.778 56.780 1.00 15.00 O ATOM 1002 N ASN 132 64.625 75.140 56.524 1.00 15.00 N ATOM 1003 CA ASN 132 64.715 74.909 57.935 1.00 15.00 C ATOM 1004 CB ASN 132 64.072 73.588 58.388 1.00 15.00 C ATOM 1005 CG ASN 132 64.848 72.446 57.746 1.00 15.00 C ATOM 1006 OD1 ASN 132 65.133 72.468 56.550 1.00 15.00 O ATOM 1007 ND2 ASN 132 65.207 71.420 58.563 1.00 15.00 N ATOM 1008 C ASN 132 66.165 74.828 58.286 1.00 15.00 C ATOM 1009 O ASN 132 66.972 74.315 57.513 1.00 15.00 O ATOM 1010 N TYR 133 66.539 75.360 59.467 1.00 15.00 N ATOM 1011 CA TYR 133 67.909 75.283 59.879 1.00 15.00 C ATOM 1012 CB TYR 133 68.637 76.638 59.845 1.00 15.00 C ATOM 1013 CG TYR 133 70.093 76.378 60.027 1.00 15.00 C ATOM 1014 CD1 TYR 133 70.867 76.029 58.943 1.00 15.00 C ATOM 1015 CD2 TYR 133 70.687 76.482 61.264 1.00 15.00 C ATOM 1016 CE1 TYR 133 72.212 75.787 59.086 1.00 15.00 C ATOM 1017 CE2 TYR 133 72.033 76.240 61.414 1.00 15.00 C ATOM 1018 CZ TYR 133 72.797 75.892 60.325 1.00 15.00 C ATOM 1019 OH TYR 133 74.178 75.645 60.478 1.00 15.00 H ATOM 1020 C TYR 133 67.889 74.819 61.300 1.00 15.00 C ATOM 1021 O TYR 133 66.955 75.113 62.042 1.00 15.00 O ATOM 1022 N GLN 134 68.915 74.052 61.719 1.00 15.00 N ATOM 1023 CA GLN 134 68.934 73.582 63.074 1.00 15.00 C ATOM 1024 CB GLN 134 68.935 72.047 63.187 1.00 15.00 C ATOM 1025 CG GLN 134 68.949 71.532 64.628 1.00 15.00 C ATOM 1026 CD GLN 134 68.946 70.010 64.580 1.00 15.00 C ATOM 1027 OE1 GLN 134 68.900 69.409 63.507 1.00 15.00 O ATOM 1028 NE2 GLN 134 69.018 69.367 65.776 1.00 15.00 N ATOM 1029 C GLN 134 70.197 74.075 63.704 1.00 15.00 C ATOM 1030 O GLN 134 71.237 74.155 63.052 1.00 15.00 O ATOM 1031 N VAL 135 70.131 74.444 64.999 1.00 15.00 N ATOM 1032 CA VAL 135 71.306 74.923 65.665 1.00 15.00 C ATOM 1033 CB VAL 135 71.320 76.413 65.842 1.00 15.00 C ATOM 1034 CG1 VAL 135 72.574 76.803 66.644 1.00 15.00 C ATOM 1035 CG2 VAL 135 71.228 77.073 64.455 1.00 15.00 C ATOM 1036 C VAL 135 71.337 74.332 67.038 1.00 15.00 C ATOM 1037 O VAL 135 70.296 74.072 67.639 1.00 15.00 O ATOM 1038 N VAL 136 72.555 74.083 67.560 1.00 15.00 N ATOM 1039 CA VAL 136 72.691 73.570 68.892 1.00 15.00 C ATOM 1040 CB VAL 136 72.916 72.088 68.942 1.00 15.00 C ATOM 1041 CG1 VAL 136 71.679 71.384 68.362 1.00 15.00 C ATOM 1042 CG2 VAL 136 74.222 71.767 68.196 1.00 15.00 C ATOM 1043 C VAL 136 73.904 74.217 69.481 1.00 15.00 C ATOM 1044 O VAL 136 74.854 74.532 68.766 1.00 15.00 O ATOM 1045 N CYS 137 73.895 74.460 70.807 1.00 15.00 N ATOM 1046 CA CYS 137 75.049 75.054 71.418 1.00 15.00 C ATOM 1047 CB CYS 137 74.916 76.571 71.637 1.00 15.00 C ATOM 1048 SG CYS 137 74.793 77.492 70.073 1.00 15.00 S ATOM 1049 C CYS 137 75.225 74.429 72.764 1.00 15.00 C ATOM 1050 O CYS 137 74.253 74.193 73.480 1.00 15.00 O ATOM 1051 N LYS 138 76.484 74.122 73.134 1.00 15.00 N ATOM 1052 CA LYS 138 76.735 73.558 74.428 1.00 15.00 C ATOM 1053 CB LYS 138 76.501 72.041 74.501 1.00 15.00 C ATOM 1054 CG LYS 138 76.714 71.445 75.896 1.00 15.00 C ATOM 1055 CD LYS 138 75.658 71.857 76.928 1.00 15.00 C ATOM 1056 CE LYS 138 75.985 73.151 77.677 1.00 15.00 C ATOM 1057 NZ LYS 138 75.469 74.321 76.932 1.00 15.00 N ATOM 1058 C LYS 138 78.174 73.802 74.756 1.00 15.00 C ATOM 1059 O LYS 138 78.999 73.987 73.862 1.00 15.00 O ATOM 1060 N GLY 139 78.508 73.829 76.061 1.00 15.00 N ATOM 1061 CA GLY 139 79.877 74.008 76.448 1.00 15.00 C ATOM 1062 C GLY 139 79.905 74.285 77.916 1.00 15.00 C ATOM 1063 O GLY 139 78.992 74.903 78.459 1.00 15.00 O ATOM 1064 N GLU 140 80.973 73.826 78.599 1.00 15.00 N ATOM 1065 CA GLU 140 81.087 74.067 80.007 1.00 15.00 C ATOM 1066 CB GLU 140 80.459 72.962 80.872 1.00 15.00 C ATOM 1067 CG GLU 140 80.525 73.249 82.374 1.00 15.00 C ATOM 1068 CD GLU 140 79.486 74.313 82.692 1.00 15.00 C ATOM 1069 OE1 GLU 140 78.396 74.285 82.062 1.00 15.00 O ATOM 1070 OE2 GLU 140 79.769 75.172 83.571 1.00 15.00 O ATOM 1071 C GLU 140 82.545 74.107 80.339 1.00 15.00 C ATOM 1072 O GLU 140 83.356 73.451 79.688 1.00 15.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 97.84 25.0 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 106.92 17.7 62 100.0 62 ARMSMC BURIED . . . . . . . . 71.71 42.3 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.95 43.6 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 91.33 41.7 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 98.06 30.8 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 71.02 69.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.23 39.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 90.41 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 97.49 18.8 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 39.86 85.7 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.42 46.2 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 75.63 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 59.85 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 106.87 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.58 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 88.58 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 107.99 0.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 14.71 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 38.27 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 38.27 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.8504 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 41.49 32 100.0 32 CRMSCA BURIED . . . . . . . . 28.85 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 38.16 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 41.43 156 100.0 156 CRMSMC BURIED . . . . . . . . 28.83 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 38.78 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 39.58 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 41.89 112 100.0 112 CRMSSC BURIED . . . . . . . . 31.19 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 38.52 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 41.71 240 100.0 240 CRMSALL BURIED . . . . . . . . 29.98 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.848 0.440 0.271 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 25.415 0.440 0.241 32 100.0 32 ERRCA BURIED . . . . . . . . 16.530 0.439 0.345 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.676 0.435 0.265 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 25.256 0.435 0.233 156 100.0 156 ERRMC BURIED . . . . . . . . 16.482 0.438 0.343 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 23.155 0.429 0.243 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 24.153 0.445 0.250 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 25.863 0.447 0.242 112 100.0 112 ERRSC BURIED . . . . . . . . 17.434 0.392 0.245 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.994 0.435 0.256 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 25.611 0.441 0.237 240 100.0 240 ERRALL BURIED . . . . . . . . 17.013 0.421 0.301 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 3 8 45 45 DISTCA CA (P) 0.00 0.00 2.22 6.67 17.78 45 DISTCA CA (RMS) 0.00 0.00 2.55 3.70 5.57 DISTCA ALL (N) 0 1 4 20 56 345 345 DISTALL ALL (P) 0.00 0.29 1.16 5.80 16.23 345 DISTALL ALL (RMS) 0.00 1.97 2.32 3.82 6.39 DISTALL END of the results output