####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS253_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS253_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 45 96 - 140 2.10 2.10 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 96 - 139 1.89 2.12 LCS_AVERAGE: 97.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 115 - 139 0.92 2.28 LCS_AVERAGE: 39.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 44 45 3 3 3 4 9 21 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 97 A 97 3 44 45 3 3 4 7 15 22 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 98 R 98 3 44 45 3 7 8 15 29 37 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 99 G 99 12 44 45 4 15 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT W 100 W 100 12 44 45 9 20 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 101 E 101 12 44 45 8 20 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 102 C 102 12 44 45 9 13 31 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 103 T 103 12 44 45 9 13 27 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 104 K 104 12 44 45 9 13 27 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 105 D 105 12 44 45 6 13 27 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 106 R 106 12 44 45 9 20 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 107 C 107 12 44 45 4 13 29 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 108 G 108 12 44 45 7 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 109 E 109 12 44 45 9 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 110 V 110 12 44 45 9 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 111 R 111 4 44 45 3 4 6 14 27 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 112 N 112 5 44 45 4 16 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 113 E 113 9 44 45 3 5 15 22 32 39 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 114 E 114 10 44 45 4 13 27 37 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 115 N 115 25 44 45 4 15 30 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT A 116 A 116 25 44 45 5 20 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 117 C 117 25 44 45 9 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT H 118 H 118 25 44 45 9 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 119 C 119 25 44 45 5 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 120 S 120 25 44 45 5 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 121 E 121 25 44 45 3 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 122 D 122 25 44 45 5 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 123 C 123 25 44 45 5 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT L 124 L 124 25 44 45 4 17 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT S 125 S 125 25 44 45 4 17 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT R 126 R 126 25 44 45 4 18 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 127 G 127 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT D 128 D 128 25 44 45 7 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 129 C 129 25 44 45 4 20 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 130 C 130 25 44 45 7 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT T 131 T 131 25 44 45 4 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT N 132 N 132 25 44 45 7 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Y 133 Y 133 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT Q 134 Q 134 25 44 45 5 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 135 V 135 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT V 136 V 136 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT C 137 C 137 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT K 138 K 138 25 44 45 6 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT G 139 G 139 25 44 45 7 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 LCS_GDT E 140 E 140 3 43 45 0 3 3 5 5 6 6 10 40 43 44 45 45 45 45 45 45 45 45 45 LCS_AVERAGE LCS_A: 79.23 ( 39.95 97.73 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 22 32 38 39 40 42 43 44 44 44 45 45 45 45 45 45 45 45 45 GDT PERCENT_AT 20.00 48.89 71.11 84.44 86.67 88.89 93.33 95.56 97.78 97.78 97.78 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.75 1.01 1.21 1.29 1.41 1.66 1.78 1.89 1.89 1.89 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 GDT RMS_ALL_AT 2.63 2.42 2.24 2.23 2.20 2.18 2.15 2.13 2.12 2.12 2.12 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 2.10 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: D 105 D 105 # possible swapping detected: E 109 E 109 # possible swapping detected: E 121 E 121 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 4.164 0 0.089 0.166 5.634 33.214 40.612 LGA A 97 A 97 4.443 0 0.399 0.422 5.371 38.810 36.286 LGA R 98 R 98 4.674 0 0.306 1.181 17.237 43.929 17.619 LGA G 99 G 99 0.918 0 0.292 0.292 3.438 71.667 71.667 LGA W 100 W 100 1.018 0 0.290 0.203 4.035 85.952 64.354 LGA E 101 E 101 1.293 0 0.101 0.811 4.025 79.286 64.127 LGA C 102 C 102 1.685 0 0.161 0.834 2.946 69.048 68.968 LGA T 103 T 103 2.020 0 0.030 0.146 2.562 66.786 64.830 LGA K 104 K 104 2.205 0 0.009 1.112 3.685 64.762 64.180 LGA D 105 D 105 2.420 0 0.101 0.986 5.597 62.857 52.262 LGA R 106 R 106 1.395 0 0.165 0.745 2.968 77.143 80.130 LGA C 107 C 107 1.863 0 0.500 0.945 4.293 61.905 59.603 LGA G 108 G 108 1.017 0 0.287 0.287 1.370 83.690 83.690 LGA E 109 E 109 1.161 0 0.128 0.581 3.648 85.952 69.524 LGA V 110 V 110 1.433 0 0.492 1.378 5.735 69.762 59.252 LGA R 111 R 111 3.366 0 0.055 1.117 15.233 57.738 23.203 LGA N 112 N 112 0.699 0 0.037 0.396 6.518 77.619 57.679 LGA E 113 E 113 3.765 0 0.211 0.934 10.800 51.905 26.984 LGA E 114 E 114 2.077 0 0.453 0.788 6.941 62.976 47.196 LGA N 115 N 115 0.955 0 0.032 0.352 1.370 88.214 87.083 LGA A 116 A 116 1.027 0 0.116 0.128 1.434 85.952 85.048 LGA C 117 C 117 0.869 0 0.084 0.187 1.221 90.476 88.968 LGA H 118 H 118 1.252 0 0.203 0.377 2.082 77.262 75.571 LGA C 119 C 119 0.605 0 0.111 0.213 1.074 88.214 88.968 LGA S 120 S 120 0.504 0 0.015 0.123 0.977 95.238 93.651 LGA E 121 E 121 1.006 0 0.105 0.986 3.932 83.690 70.106 LGA D 122 D 122 0.710 0 0.208 1.206 3.835 88.214 79.048 LGA C 123 C 123 0.761 0 0.052 0.778 2.685 88.214 83.413 LGA L 124 L 124 1.858 0 0.033 1.428 4.545 69.048 66.964 LGA S 125 S 125 2.217 0 0.208 0.530 3.226 64.881 62.381 LGA R 126 R 126 1.788 0 0.101 0.565 2.054 72.857 72.164 LGA G 127 G 127 0.990 0 0.137 0.137 1.110 85.952 85.952 LGA D 128 D 128 0.945 0 0.087 1.259 3.558 85.952 76.786 LGA C 129 C 129 1.249 0 0.101 0.186 1.466 85.952 84.444 LGA C 130 C 130 0.352 0 0.116 0.175 1.450 90.595 89.048 LGA T 131 T 131 1.339 0 0.228 1.109 3.440 83.690 74.626 LGA N 132 N 132 1.129 0 0.101 1.176 3.797 79.286 72.440 LGA Y 133 Y 133 1.126 0 0.061 0.394 2.833 83.690 76.151 LGA Q 134 Q 134 1.039 0 0.046 0.360 1.939 81.429 83.492 LGA V 135 V 135 1.410 0 0.041 0.054 1.517 81.429 80.204 LGA V 136 V 136 1.517 0 0.085 0.083 1.834 75.000 75.306 LGA C 137 C 137 1.252 0 0.046 0.081 1.502 81.429 80.000 LGA K 138 K 138 1.860 0 0.684 0.748 5.632 60.476 50.847 LGA G 139 G 139 1.242 0 0.715 0.715 3.795 68.095 68.095 LGA E 140 E 140 6.798 0 0.227 1.132 12.660 12.619 6.296 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 2.101 2.211 3.794 73.175 66.872 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 43 1.78 82.222 89.686 2.283 LGA_LOCAL RMSD: 1.784 Number of atoms: 43 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.134 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 2.101 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.951838 * X + 0.283729 * Y + 0.116197 * Z + 20.606411 Y_new = 0.029960 * X + -0.291096 * Y + 0.956225 * Z + 59.554260 Z_new = 0.305133 * X + 0.913652 * Y + 0.268576 * Z + 29.429163 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.110127 -0.310078 1.284891 [DEG: 178.1971 -17.7662 73.6188 ] ZXZ: 3.020669 1.298882 0.322324 [DEG: 173.0716 74.4204 18.4678 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS253_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS253_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 43 1.78 89.686 2.10 REMARK ---------------------------------------------------------- MOLECULE T0543TS253_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 2gsn_A 1ei6_A 1zm8_A 3ism_A 1ql0_A ATOM 1426 N THR 96 14.114 84.209 23.681 1.00 0.50 N ATOM 1427 CA THR 96 15.507 84.556 23.422 1.00 0.50 C ATOM 1428 C THR 96 15.612 85.719 22.445 1.00 0.50 C ATOM 1429 O THR 96 16.710 86.153 22.096 1.00 0.50 O ATOM 1430 CB THR 96 16.287 83.346 22.860 1.00 0.50 C ATOM 1431 OG1 THR 96 16.173 82.254 23.781 1.00 0.50 O ATOM 1432 CG2 THR 96 17.759 83.685 22.663 1.00 0.50 C ATOM 1440 N ALA 97 14.463 86.221 22.004 1.00 0.50 N ATOM 1441 CA ALA 97 14.423 87.336 21.064 1.00 0.50 C ATOM 1442 C ALA 97 14.511 86.846 19.624 1.00 0.50 C ATOM 1443 O ALA 97 15.223 87.425 18.804 1.00 0.50 O ATOM 1444 CB ALA 97 15.560 88.310 21.354 1.00 0.50 C ATOM 1450 N ARG 98 13.785 85.775 19.324 1.00 0.50 N ATOM 1451 CA ARG 98 13.782 85.203 17.982 1.00 0.50 C ATOM 1452 C ARG 98 12.534 85.613 17.211 1.00 0.50 C ATOM 1453 O ARG 98 12.625 86.168 16.115 1.00 0.50 O ATOM 1454 CB ARG 98 13.871 83.677 18.051 1.00 0.50 C ATOM 1455 CG ARG 98 15.193 83.166 18.606 1.00 0.50 C ATOM 1456 CD ARG 98 15.221 81.645 18.671 1.00 0.50 C ATOM 1457 NE ARG 98 16.484 81.152 19.212 1.00 0.50 N ATOM 1458 CZ ARG 98 16.792 79.869 19.380 1.00 0.50 C ATOM 1459 NH1 ARG 98 16.017 78.909 18.880 1.00 0.50 H ATOM 1460 NH2 ARG 98 17.883 79.538 20.069 1.00 0.50 H ATOM 1474 N GLY 99 11.370 85.335 17.788 1.00 0.50 N ATOM 1475 CA GLY 99 10.102 85.675 17.155 1.00 0.50 C ATOM 1476 C GLY 99 9.524 84.481 16.404 1.00 0.50 C ATOM 1477 O GLY 99 8.755 83.699 16.962 1.00 0.50 O ATOM 1481 N TRP 100 9.898 84.348 15.137 1.00 0.50 N ATOM 1482 CA TRP 100 9.418 83.250 14.307 1.00 0.50 C ATOM 1483 C TRP 100 8.256 83.693 13.427 1.00 0.50 C ATOM 1484 O TRP 100 7.130 83.219 13.586 1.00 0.50 O ATOM 1485 CB TRP 100 8.988 82.066 15.183 1.00 0.50 C ATOM 1486 CG TRP 100 10.123 81.401 15.906 1.00 0.50 C ATOM 1487 CD1 TRP 100 10.467 81.564 17.220 1.00 0.50 C ATOM 1488 CD2 TRP 100 11.058 80.469 15.354 1.00 0.50 C ATOM 1489 NE1 TRP 100 11.562 80.788 17.517 1.00 0.50 N ATOM 1490 CE2 TRP 100 11.944 80.107 16.392 1.00 0.50 C ATOM 1491 CE3 TRP 100 11.231 79.905 14.083 1.00 0.50 C ATOM 1492 CZ2 TRP 100 12.993 79.204 16.197 1.00 0.50 C ATOM 1493 CZ3 TRP 100 12.274 79.006 13.890 1.00 0.50 C ATOM 1494 CH2 TRP 100 13.141 78.666 14.941 1.00 0.50 H ATOM 1505 N GLU 101 8.534 84.604 12.502 1.00 0.50 N ATOM 1506 CA GLU 101 7.511 85.112 11.594 1.00 0.50 C ATOM 1507 C GLU 101 8.137 85.765 10.369 1.00 0.50 C ATOM 1508 O GLU 101 8.818 86.785 10.476 1.00 0.50 O ATOM 1509 CB GLU 101 6.609 86.118 12.315 1.00 0.50 C ATOM 1510 CG GLU 101 5.483 86.665 11.447 1.00 0.50 C ATOM 1511 CD GLU 101 4.514 87.549 12.210 1.00 0.50 C ATOM 1512 OE1 GLU 101 4.664 87.704 13.440 1.00 0.50 O ATOM 1513 OE2 GLU 101 3.581 88.088 11.566 1.00 0.50 O ATOM 1520 N CYS 102 7.905 85.171 9.203 1.00 0.50 N ATOM 1521 CA CYS 102 8.446 85.693 7.955 1.00 0.50 C ATOM 1522 C CYS 102 7.523 86.744 7.352 1.00 0.50 C ATOM 1523 O CYS 102 6.403 86.441 6.946 1.00 0.50 O ATOM 1524 CB CYS 102 8.661 84.557 6.948 1.00 0.50 C ATOM 1525 SG CYS 102 9.337 85.111 5.362 1.00 0.50 S ATOM 1531 N THR 103 8.002 87.983 7.298 1.00 0.50 N ATOM 1532 CA THR 103 7.222 89.083 6.745 1.00 0.50 C ATOM 1533 C THR 103 7.436 89.209 5.242 1.00 0.50 C ATOM 1534 O THR 103 8.397 88.668 4.694 1.00 0.50 O ATOM 1535 CB THR 103 7.586 90.421 7.425 1.00 0.50 C ATOM 1536 OG1 THR 103 8.962 90.716 7.156 1.00 0.50 O ATOM 1537 CG2 THR 103 7.374 90.347 8.931 1.00 0.50 C ATOM 1545 N LYS 104 6.536 89.926 4.578 1.00 0.50 N ATOM 1546 CA LYS 104 6.625 90.126 3.137 1.00 0.50 C ATOM 1547 C LYS 104 7.992 90.671 2.741 1.00 0.50 C ATOM 1548 O LYS 104 8.569 90.256 1.736 1.00 0.50 O ATOM 1549 CB LYS 104 5.527 91.079 2.660 1.00 0.50 C ATOM 1550 CG LYS 104 4.135 90.469 2.675 1.00 0.50 C ATOM 1551 CD LYS 104 3.103 91.422 2.086 1.00 0.50 C ATOM 1552 CE LYS 104 2.729 92.525 3.068 1.00 0.50 C ATOM 1553 NZ LYS 104 1.693 93.439 2.505 1.00 0.50 N ATOM 1567 N ASP 105 8.504 91.605 3.535 1.00 0.50 N ATOM 1568 CA ASP 105 9.804 92.209 3.269 1.00 0.50 C ATOM 1569 C ASP 105 10.929 91.199 3.456 1.00 0.50 C ATOM 1570 O ASP 105 11.932 91.234 2.744 1.00 0.50 O ATOM 1571 CB ASP 105 10.029 93.417 4.183 1.00 0.50 C ATOM 1572 CG ASP 105 9.190 94.621 3.796 1.00 0.50 C ATOM 1573 OD1 ASP 105 8.611 94.634 2.690 1.00 0.50 O ATOM 1574 OD2 ASP 105 9.112 95.568 4.611 1.00 0.50 O ATOM 1579 N ARG 106 10.757 90.301 4.421 1.00 0.50 N ATOM 1580 CA ARG 106 11.757 89.279 4.703 1.00 0.50 C ATOM 1581 C ARG 106 11.786 88.219 3.608 1.00 0.50 C ATOM 1582 O ARG 106 12.852 87.742 3.221 1.00 0.50 O ATOM 1583 CB ARG 106 11.481 88.619 6.056 1.00 0.50 C ATOM 1584 CG ARG 106 11.813 89.506 7.248 1.00 0.50 C ATOM 1585 CD ARG 106 11.489 88.816 8.565 1.00 0.50 C ATOM 1586 NE ARG 106 12.390 87.697 8.825 1.00 0.50 N ATOM 1587 CZ ARG 106 13.632 87.811 9.288 1.00 0.50 C ATOM 1588 NH1 ARG 106 14.091 88.978 9.734 1.00 0.50 H ATOM 1589 NH2 ARG 106 14.431 86.746 9.293 1.00 0.50 H ATOM 1603 N CYS 107 10.608 87.853 3.117 1.00 0.50 N ATOM 1604 CA CYS 107 10.496 86.848 2.065 1.00 0.50 C ATOM 1605 C CYS 107 11.751 86.810 1.204 1.00 0.50 C ATOM 1606 O CYS 107 12.636 85.981 1.417 1.00 0.50 O ATOM 1607 CB CYS 107 9.274 87.131 1.183 1.00 0.50 C ATOM 1608 SG CYS 107 9.008 85.888 -0.107 1.00 0.50 S ATOM 1614 N GLY 108 11.821 87.710 0.230 1.00 0.50 N ATOM 1615 CA GLY 108 12.969 87.780 -0.667 1.00 0.50 C ATOM 1616 C GLY 108 14.133 88.515 -0.014 1.00 0.50 C ATOM 1617 O GLY 108 14.586 89.546 -0.512 1.00 0.50 O ATOM 1621 N GLU 109 14.612 87.980 1.104 1.00 0.50 N ATOM 1622 CA GLU 109 15.725 88.583 1.827 1.00 0.50 C ATOM 1623 C GLU 109 16.902 87.624 1.927 1.00 0.50 C ATOM 1624 O GLU 109 16.764 86.504 2.421 1.00 0.50 O ATOM 1625 CB GLU 109 15.281 89.010 3.230 1.00 0.50 C ATOM 1626 CG GLU 109 16.368 89.717 4.029 1.00 0.50 C ATOM 1627 CD GLU 109 15.858 90.342 5.315 1.00 0.50 C ATOM 1628 OE1 GLU 109 15.351 89.610 6.192 1.00 0.50 O ATOM 1629 OE2 GLU 109 15.958 91.587 5.442 1.00 0.50 O ATOM 1636 N VAL 110 18.063 88.066 1.454 1.00 0.50 N ATOM 1637 CA VAL 110 19.268 87.247 1.491 1.00 0.50 C ATOM 1638 C VAL 110 20.226 87.723 2.575 1.00 0.50 C ATOM 1639 O VAL 110 21.443 87.698 2.396 1.00 0.50 O ATOM 1640 CB VAL 110 19.993 87.254 0.126 1.00 0.50 C ATOM 1641 CG1 VAL 110 19.133 86.596 -0.947 1.00 0.50 C ATOM 1642 CG2 VAL 110 20.343 88.682 -0.282 1.00 0.50 C ATOM 1652 N ARG 111 19.669 88.156 3.701 1.00 0.50 N ATOM 1653 CA ARG 111 20.472 88.640 4.817 1.00 0.50 C ATOM 1654 C ARG 111 19.899 88.176 6.149 1.00 0.50 C ATOM 1655 O ARG 111 18.769 88.513 6.503 1.00 0.50 O ATOM 1656 CB ARG 111 20.557 90.169 4.793 1.00 0.50 C ATOM 1657 CG ARG 111 21.433 90.750 5.893 1.00 0.50 C ATOM 1658 CD ARG 111 21.438 92.271 5.860 1.00 0.50 C ATOM 1659 NE ARG 111 22.298 92.831 6.898 1.00 0.50 N ATOM 1660 CZ ARG 111 21.899 93.155 8.126 1.00 0.50 C ATOM 1661 NH1 ARG 111 20.691 92.810 8.565 1.00 0.50 H ATOM 1662 NH2 ARG 111 22.713 93.846 8.921 1.00 0.50 H ATOM 1676 N ASN 112 20.685 87.398 6.887 1.00 0.50 N ATOM 1677 CA ASN 112 20.257 86.885 8.182 1.00 0.50 C ATOM 1678 C ASN 112 21.402 86.900 9.187 1.00 0.50 C ATOM 1679 O ASN 112 22.417 86.230 8.995 1.00 0.50 O ATOM 1680 CB ASN 112 19.699 85.464 8.037 1.00 0.50 C ATOM 1681 CG ASN 112 19.120 84.931 9.333 1.00 0.50 C ATOM 1682 OD1 ASN 112 19.823 84.823 10.343 1.00 0.50 O ATOM 1683 ND2 ASN 112 17.836 84.595 9.320 1.00 0.50 N ATOM 1690 N GLU 113 21.235 87.670 10.257 1.00 0.50 N ATOM 1691 CA GLU 113 22.254 87.774 11.293 1.00 0.50 C ATOM 1692 C GLU 113 21.753 87.209 12.616 1.00 0.50 C ATOM 1693 O GLU 113 22.323 86.258 13.152 1.00 0.50 O ATOM 1694 CB GLU 113 22.681 89.233 11.479 1.00 0.50 C ATOM 1695 CG GLU 113 23.401 89.820 10.272 1.00 0.50 C ATOM 1696 CD GLU 113 23.910 91.232 10.505 1.00 0.50 C ATOM 1697 OE1 GLU 113 23.770 91.756 11.631 1.00 0.50 O ATOM 1698 OE2 GLU 113 24.451 91.827 9.541 1.00 0.50 O ATOM 1705 N GLU 114 20.685 87.802 13.140 1.00 0.50 N ATOM 1706 CA GLU 114 20.105 87.358 14.403 1.00 0.50 C ATOM 1707 C GLU 114 18.628 87.021 14.240 1.00 0.50 C ATOM 1708 O GLU 114 17.759 87.848 14.515 1.00 0.50 O ATOM 1709 CB GLU 114 20.278 88.436 15.478 1.00 0.50 C ATOM 1710 CG GLU 114 19.880 87.977 16.875 1.00 0.50 C ATOM 1711 CD GLU 114 20.071 89.046 17.936 1.00 0.50 C ATOM 1712 OE1 GLU 114 20.506 90.169 17.600 1.00 0.50 O ATOM 1713 OE2 GLU 114 19.790 88.752 19.122 1.00 0.50 O ATOM 1720 N ASN 115 18.351 85.801 13.791 1.00 0.50 N ATOM 1721 CA ASN 115 16.978 85.352 13.593 1.00 0.50 C ATOM 1722 C ASN 115 16.833 83.869 13.911 1.00 0.50 C ATOM 1723 O ASN 115 17.799 83.110 13.829 1.00 0.50 O ATOM 1724 CB ASN 115 16.526 85.634 12.155 1.00 0.50 C ATOM 1725 CG ASN 115 16.435 87.119 11.855 1.00 0.50 C ATOM 1726 OD1 ASN 115 15.494 87.793 12.285 1.00 0.50 O ATOM 1727 ND2 ASN 115 17.406 87.640 11.118 1.00 0.50 N ATOM 1734 N ALA 116 15.622 83.464 14.276 1.00 0.50 N ATOM 1735 CA ALA 116 15.349 82.070 14.609 1.00 0.50 C ATOM 1736 C ALA 116 15.008 81.263 13.363 1.00 0.50 C ATOM 1737 O ALA 116 15.196 80.047 13.328 1.00 0.50 O ATOM 1738 CB ALA 116 14.205 81.984 15.616 1.00 0.50 C ATOM 1744 N CYS 117 14.503 81.946 12.341 1.00 0.50 N ATOM 1745 CA CYS 117 14.135 81.293 11.090 1.00 0.50 C ATOM 1746 C CYS 117 14.474 82.170 9.891 1.00 0.50 C ATOM 1747 O CYS 117 14.472 83.397 9.986 1.00 0.50 O ATOM 1748 CB CYS 117 12.638 80.963 11.079 1.00 0.50 C ATOM 1749 SG CYS 117 11.572 82.424 11.164 1.00 0.50 S ATOM 1755 N HIS 118 14.768 81.532 8.763 1.00 0.50 N ATOM 1756 CA HIS 118 15.109 82.253 7.542 1.00 0.50 C ATOM 1757 C HIS 118 13.896 82.405 6.635 1.00 0.50 C ATOM 1758 O HIS 118 13.412 81.431 6.059 1.00 0.50 O ATOM 1759 CB HIS 118 16.232 81.526 6.789 1.00 0.50 C ATOM 1760 CG HIS 118 17.538 81.537 7.523 1.00 0.50 C ATOM 1761 ND1 HIS 118 17.813 80.684 8.570 1.00 0.50 N ATOM 1762 CD2 HIS 118 18.645 82.304 7.347 1.00 0.50 C ATOM 1763 CE1 HIS 118 19.040 80.928 9.010 1.00 0.50 C ATOM 1764 NE2 HIS 118 19.563 81.906 8.286 1.00 0.50 N ATOM 1772 N CYS 119 13.405 83.634 6.513 1.00 0.50 N ATOM 1773 CA CYS 119 12.246 83.917 5.674 1.00 0.50 C ATOM 1774 C CYS 119 12.640 84.013 4.205 1.00 0.50 C ATOM 1775 O CYS 119 11.809 84.318 3.350 1.00 0.50 O ATOM 1776 CB CYS 119 11.574 85.224 6.113 1.00 0.50 C ATOM 1777 SG CYS 119 10.847 85.142 7.771 1.00 0.50 S ATOM 1783 N SER 120 13.911 83.754 3.920 1.00 0.50 N ATOM 1784 CA SER 120 14.416 83.808 2.554 1.00 0.50 C ATOM 1785 C SER 120 14.026 82.562 1.772 1.00 0.50 C ATOM 1786 O SER 120 13.775 81.506 2.353 1.00 0.50 O ATOM 1787 CB SER 120 15.939 83.963 2.554 1.00 0.50 C ATOM 1788 OG SER 120 16.558 82.797 3.073 1.00 0.50 O ATOM 1794 N GLU 121 13.973 82.691 0.450 1.00 0.50 N ATOM 1795 CA GLU 121 13.613 81.574 -0.415 1.00 0.50 C ATOM 1796 C GLU 121 14.325 80.297 0.009 1.00 0.50 C ATOM 1797 O GLU 121 13.789 79.198 -0.135 1.00 0.50 O ATOM 1798 CB GLU 121 13.951 81.898 -1.873 1.00 0.50 C ATOM 1799 CG GLU 121 13.552 80.801 -2.853 1.00 0.50 C ATOM 1800 CD GLU 121 13.833 81.159 -4.301 1.00 0.50 C ATOM 1801 OE1 GLU 121 14.324 82.277 -4.572 1.00 0.50 O ATOM 1802 OE2 GLU 121 13.550 80.310 -5.181 1.00 0.50 O ATOM 1809 N ASP 122 15.539 80.447 0.532 1.00 0.50 N ATOM 1810 CA ASP 122 16.327 79.305 0.977 1.00 0.50 C ATOM 1811 C ASP 122 15.613 78.538 2.082 1.00 0.50 C ATOM 1812 O ASP 122 15.665 77.310 2.132 1.00 0.50 O ATOM 1813 CB ASP 122 17.704 79.765 1.465 1.00 0.50 C ATOM 1814 CG ASP 122 18.625 80.189 0.337 1.00 0.50 C ATOM 1815 OD1 ASP 122 18.320 79.912 -0.842 1.00 0.50 O ATOM 1816 OD2 ASP 122 19.672 80.806 0.635 1.00 0.50 O ATOM 1821 N CYS 123 14.946 79.271 2.967 1.00 0.50 N ATOM 1822 CA CYS 123 14.220 78.662 4.074 1.00 0.50 C ATOM 1823 C CYS 123 13.357 77.501 3.594 1.00 0.50 C ATOM 1824 O CYS 123 13.313 76.444 4.225 1.00 0.50 O ATOM 1825 CB CYS 123 13.339 79.703 4.773 1.00 0.50 C ATOM 1826 SG CYS 123 14.279 81.031 5.570 1.00 0.50 S ATOM 1832 N LEU 124 12.669 77.705 2.476 1.00 0.50 N ATOM 1833 CA LEU 124 11.804 76.677 1.910 1.00 0.50 C ATOM 1834 C LEU 124 12.599 75.431 1.539 1.00 0.50 C ATOM 1835 O LEU 124 12.193 74.310 1.844 1.00 0.50 O ATOM 1836 CB LEU 124 11.080 77.214 0.670 1.00 0.50 C ATOM 1837 CG LEU 124 10.143 76.237 -0.045 1.00 0.50 C ATOM 1838 CD1 LEU 124 9.030 75.796 0.896 1.00 0.50 C ATOM 1839 CD2 LEU 124 9.560 76.887 -1.292 1.00 0.50 C ATOM 1851 N SER 125 13.735 75.635 0.881 1.00 0.50 N ATOM 1852 CA SER 125 14.590 74.529 0.466 1.00 0.50 C ATOM 1853 C SER 125 15.304 73.908 1.660 1.00 0.50 C ATOM 1854 O SER 125 15.227 72.698 1.881 1.00 0.50 O ATOM 1855 CB SER 125 15.619 75.005 -0.563 1.00 0.50 C ATOM 1856 OG SER 125 16.489 73.946 -0.923 1.00 0.50 O ATOM 1862 N ARG 126 16.000 74.741 2.426 1.00 0.50 N ATOM 1863 CA ARG 126 16.729 74.275 3.599 1.00 0.50 C ATOM 1864 C ARG 126 15.783 73.688 4.639 1.00 0.50 C ATOM 1865 O ARG 126 16.161 72.803 5.407 1.00 0.50 O ATOM 1866 CB ARG 126 17.535 75.420 4.218 1.00 0.50 C ATOM 1867 CG ARG 126 18.728 75.852 3.378 1.00 0.50 C ATOM 1868 CD ARG 126 19.445 77.044 3.995 1.00 0.50 C ATOM 1869 NE ARG 126 20.584 77.466 3.186 1.00 0.50 N ATOM 1870 CZ ARG 126 21.315 78.556 3.410 1.00 0.50 C ATOM 1871 NH1 ARG 126 21.167 79.260 4.529 1.00 0.50 H ATOM 1872 NH2 ARG 126 22.197 78.954 2.496 1.00 0.50 H ATOM 1886 N GLY 127 14.553 74.188 4.662 1.00 0.50 N ATOM 1887 CA GLY 127 13.550 73.716 5.609 1.00 0.50 C ATOM 1888 C GLY 127 13.496 74.604 6.844 1.00 0.50 C ATOM 1889 O GLY 127 12.841 74.272 7.832 1.00 0.50 O ATOM 1893 N ASP 128 14.191 75.735 6.783 1.00 0.50 N ATOM 1894 CA ASP 128 14.224 76.675 7.899 1.00 0.50 C ATOM 1895 C ASP 128 13.158 77.752 7.743 1.00 0.50 C ATOM 1896 O ASP 128 13.364 78.904 8.124 1.00 0.50 O ATOM 1897 CB ASP 128 15.609 77.321 8.011 1.00 0.50 C ATOM 1898 CG ASP 128 16.711 76.321 8.305 1.00 0.50 C ATOM 1899 OD1 ASP 128 16.540 75.466 9.199 1.00 0.50 O ATOM 1900 OD2 ASP 128 17.765 76.395 7.634 1.00 0.50 O ATOM 1905 N CYS 129 12.016 77.370 7.179 1.00 0.50 N ATOM 1906 CA CYS 129 10.916 78.303 6.971 1.00 0.50 C ATOM 1907 C CYS 129 10.208 78.621 8.282 1.00 0.50 C ATOM 1908 O CYS 129 9.676 77.729 8.943 1.00 0.50 O ATOM 1909 CB CYS 129 9.909 77.727 5.968 1.00 0.50 C ATOM 1910 SG CYS 129 10.595 77.487 4.310 1.00 0.50 S ATOM 1916 N CYS 130 10.205 79.897 8.652 1.00 0.50 N ATOM 1917 CA CYS 130 9.564 80.335 9.886 1.00 0.50 C ATOM 1918 C CYS 130 8.067 80.049 9.860 1.00 0.50 C ATOM 1919 O CYS 130 7.381 80.373 8.890 1.00 0.50 O ATOM 1920 CB CYS 130 9.799 81.834 10.108 1.00 0.50 C ATOM 1921 SG CYS 130 11.531 82.257 10.420 1.00 0.50 S ATOM 1927 N THR 131 7.568 79.440 10.930 1.00 0.50 N ATOM 1928 CA THR 131 6.151 79.110 11.032 1.00 0.50 C ATOM 1929 C THR 131 5.334 79.863 9.990 1.00 0.50 C ATOM 1930 O THR 131 4.724 79.257 9.109 1.00 0.50 O ATOM 1931 CB THR 131 5.604 79.435 12.440 1.00 0.50 C ATOM 1932 OG1 THR 131 6.387 78.732 13.412 1.00 0.50 O ATOM 1933 CG2 THR 131 4.146 79.015 12.572 1.00 0.50 C ATOM 1941 N ASN 132 5.324 81.187 10.097 1.00 0.50 N ATOM 1942 CA ASN 132 4.580 82.026 9.165 1.00 0.50 C ATOM 1943 C ASN 132 5.424 82.375 7.946 1.00 0.50 C ATOM 1944 O ASN 132 5.191 83.390 7.289 1.00 0.50 O ATOM 1945 CB ASN 132 4.098 83.303 9.863 1.00 0.50 C ATOM 1946 CG ASN 132 3.000 83.036 10.874 1.00 0.50 C ATOM 1947 OD1 ASN 132 2.264 82.051 10.760 1.00 0.50 O ATOM 1948 ND2 ASN 132 2.880 83.904 11.869 1.00 0.50 N ATOM 1955 N TYR 133 6.406 81.531 7.650 1.00 0.50 N ATOM 1956 CA TYR 133 7.288 81.750 6.510 1.00 0.50 C ATOM 1957 C TYR 133 6.491 81.934 5.225 1.00 0.50 C ATOM 1958 O TYR 133 6.490 83.012 4.632 1.00 0.50 O ATOM 1959 CB TYR 133 8.261 80.574 6.352 1.00 0.50 C ATOM 1960 CG TYR 133 9.238 80.744 5.209 1.00 0.50 C ATOM 1961 CD1 TYR 133 10.382 81.525 5.358 1.00 0.50 C ATOM 1962 CD2 TYR 133 9.013 80.124 3.983 1.00 0.50 C ATOM 1963 CE1 TYR 133 11.282 81.686 4.309 1.00 0.50 C ATOM 1964 CE2 TYR 133 9.906 80.278 2.927 1.00 0.50 C ATOM 1965 CZ TYR 133 11.037 81.060 3.099 1.00 0.50 C ATOM 1966 OH TYR 133 11.923 81.213 2.056 1.00 0.50 H ATOM 1976 N GLN 134 5.812 80.873 4.799 1.00 0.50 N ATOM 1977 CA GLN 134 5.010 80.915 3.581 1.00 0.50 C ATOM 1978 C GLN 134 3.738 81.728 3.788 1.00 0.50 C ATOM 1979 O GLN 134 3.197 82.301 2.843 1.00 0.50 O ATOM 1980 CB GLN 134 4.651 79.497 3.126 1.00 0.50 C ATOM 1981 CG GLN 134 5.851 78.691 2.640 1.00 0.50 C ATOM 1982 CD GLN 134 5.467 77.311 2.140 1.00 0.50 C ATOM 1983 OE1 GLN 134 5.212 76.397 2.933 1.00 0.50 O ATOM 1984 NE2 GLN 134 5.423 77.142 0.823 1.00 0.50 N ATOM 1993 N VAL 135 3.266 81.772 5.029 1.00 0.50 N ATOM 1994 CA VAL 135 2.055 82.514 5.361 1.00 0.50 C ATOM 1995 C VAL 135 2.282 84.016 5.249 1.00 0.50 C ATOM 1996 O VAL 135 1.576 84.708 4.516 1.00 0.50 O ATOM 1997 CB VAL 135 1.562 82.175 6.785 1.00 0.50 C ATOM 1998 CG1 VAL 135 0.385 83.063 7.176 1.00 0.50 C ATOM 1999 CG2 VAL 135 1.166 80.705 6.874 1.00 0.50 C ATOM 2009 N VAL 136 3.271 84.516 5.983 1.00 0.50 N ATOM 2010 CA VAL 136 3.592 85.939 5.967 1.00 0.50 C ATOM 2011 C VAL 136 4.345 86.319 4.698 1.00 0.50 C ATOM 2012 O VAL 136 4.380 87.488 4.313 1.00 0.50 O ATOM 2013 CB VAL 136 4.433 86.337 7.200 1.00 0.50 C ATOM 2014 CG1 VAL 136 4.873 87.795 7.108 1.00 0.50 C ATOM 2015 CG2 VAL 136 3.639 86.107 8.482 1.00 0.50 C ATOM 2025 N CYS 137 4.946 85.326 4.051 1.00 0.50 N ATOM 2026 CA CYS 137 5.698 85.555 2.824 1.00 0.50 C ATOM 2027 C CYS 137 4.903 85.121 1.600 1.00 0.50 C ATOM 2028 O CYS 137 5.252 85.457 0.469 1.00 0.50 O ATOM 2029 CB CYS 137 7.032 84.800 2.866 1.00 0.50 C ATOM 2030 SG CYS 137 8.052 85.210 4.305 1.00 0.50 S ATOM 2036 N LYS 138 3.831 84.372 1.833 1.00 0.50 N ATOM 2037 CA LYS 138 2.983 83.890 0.750 1.00 0.50 C ATOM 2038 C LYS 138 1.779 84.801 0.545 1.00 0.50 C ATOM 2039 O LYS 138 1.850 86.004 0.794 1.00 0.50 O ATOM 2040 CB LYS 138 2.510 82.462 1.035 1.00 0.50 C ATOM 2041 CG LYS 138 3.644 81.474 1.263 1.00 0.50 C ATOM 2042 CD LYS 138 4.441 81.239 -0.014 1.00 0.50 C ATOM 2043 CE LYS 138 5.392 80.056 0.125 1.00 0.50 C ATOM 2044 NZ LYS 138 6.563 80.386 0.988 1.00 0.50 N ATOM 2058 N GLY 139 0.675 84.220 0.089 1.00 0.50 N ATOM 2059 CA GLY 139 -0.547 84.979 -0.150 1.00 0.50 C ATOM 2060 C GLY 139 -0.841 85.096 -1.640 1.00 0.50 C ATOM 2061 O GLY 139 0.039 84.881 -2.474 1.00 0.50 O ATOM 2065 N GLU 140 -2.082 85.437 -1.969 1.00 0.50 N ATOM 2066 CA GLU 140 -2.493 85.582 -3.360 1.00 0.50 C ATOM 2067 C GLU 140 -2.216 86.990 -3.872 1.00 0.50 C ATOM 2068 O GLU 140 -2.774 87.965 -3.369 1.00 0.50 O ATOM 2069 CB GLU 140 -3.983 85.257 -3.514 1.00 0.50 C ATOM 2070 CG GLU 140 -4.480 85.319 -4.952 1.00 0.50 C ATOM 2071 CD GLU 140 -5.949 84.964 -5.095 1.00 0.50 C ATOM 2072 OE1 GLU 140 -6.619 84.708 -4.072 1.00 0.50 O ATOM 2073 OE2 GLU 140 -6.434 84.931 -6.252 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.58 56.8 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 63.73 51.6 62 100.0 62 ARMSMC BURIED . . . . . . . . 33.93 69.2 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.35 53.8 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 79.90 52.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 83.07 46.2 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 71.35 69.2 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 53.11 65.2 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 51.19 72.2 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 61.87 56.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 22.81 85.7 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.65 53.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 64.30 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 59.73 60.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 71.51 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.48 33.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 80.48 33.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 84.51 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 71.74 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.10 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.10 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.0467 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 2.32 32 100.0 32 CRMSCA BURIED . . . . . . . . 1.43 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.34 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 2.59 156 100.0 156 CRMSMC BURIED . . . . . . . . 1.59 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.00 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 5.22 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 5.18 112 100.0 112 CRMSSC BURIED . . . . . . . . 4.59 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.81 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 3.97 240 100.0 240 CRMSALL BURIED . . . . . . . . 3.41 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.221 0.449 0.225 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 1.424 0.493 0.247 32 100.0 32 ERRCA BURIED . . . . . . . . 0.723 0.342 0.171 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.396 0.483 0.243 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 1.641 0.532 0.266 156 100.0 156 ERRMC BURIED . . . . . . . . 0.808 0.368 0.187 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.147 0.633 0.317 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 3.304 0.638 0.319 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 3.481 0.685 0.342 112 100.0 112 ERRSC BURIED . . . . . . . . 2.440 0.525 0.262 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.195 0.550 0.276 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 2.450 0.595 0.298 240 100.0 240 ERRALL BURIED . . . . . . . . 1.612 0.446 0.225 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 13 34 39 44 45 45 45 DISTCA CA (P) 28.89 75.56 86.67 97.78 100.00 45 DISTCA CA (RMS) 0.73 1.23 1.41 1.91 2.10 DISTCA ALL (N) 58 188 257 310 330 345 345 DISTALL ALL (P) 16.81 54.49 74.49 89.86 95.65 345 DISTALL ALL (RMS) 0.75 1.28 1.68 2.20 2.74 DISTALL END of the results output