####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 306), selected 40 , name T0543TS245_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS245_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 57 - 73 4.89 19.81 LONGEST_CONTINUOUS_SEGMENT: 17 58 - 74 4.74 18.98 LCS_AVERAGE: 40.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 70 - 77 1.68 17.08 LCS_AVERAGE: 15.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 62 - 66 0.76 20.75 LONGEST_CONTINUOUS_SEGMENT: 5 71 - 75 0.86 16.06 LCS_AVERAGE: 9.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 4 6 13 3 3 6 7 7 7 7 9 9 10 11 11 12 15 15 15 16 18 19 21 LCS_GDT S 57 S 57 4 6 17 3 3 6 7 7 7 8 8 8 10 12 13 14 15 15 17 17 18 18 20 LCS_GDT C 58 C 58 4 6 17 3 4 6 7 7 7 9 10 11 13 14 15 15 16 16 17 17 18 19 21 LCS_GDT K 59 K 59 4 6 17 3 4 6 7 7 7 9 10 11 13 14 15 15 16 16 17 17 18 19 21 LCS_GDT G 60 G 60 4 6 17 3 4 4 5 6 7 10 10 11 13 14 15 15 16 16 17 17 18 20 23 LCS_GDT R 61 R 61 4 6 17 3 4 6 7 7 7 10 10 11 13 14 15 15 16 16 17 17 18 20 24 LCS_GDT C 62 C 62 5 7 17 3 4 5 7 7 7 10 10 11 13 14 15 15 16 16 17 17 18 20 23 LCS_GDT F 63 F 63 5 7 17 3 4 5 7 7 7 10 10 11 13 14 15 15 16 16 17 17 18 19 21 LCS_GDT E 64 E 64 5 7 17 3 4 5 7 7 7 10 10 11 13 14 15 15 16 16 17 20 23 25 27 LCS_GDT L 65 L 65 5 7 17 3 4 5 7 7 7 10 10 11 13 14 15 15 16 16 19 20 23 25 27 LCS_GDT Q 66 Q 66 5 7 17 3 4 5 7 7 7 10 12 13 14 15 17 17 18 20 22 23 25 25 27 LCS_GDT E 67 E 67 4 7 17 3 4 5 7 7 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT V 68 V 68 4 7 17 3 4 5 7 7 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT G 69 G 69 4 7 17 3 4 6 7 7 7 10 10 12 12 14 17 17 18 20 22 24 25 25 27 LCS_GDT P 70 P 70 4 8 17 1 4 5 6 8 8 8 10 11 12 14 15 15 18 20 22 23 23 25 26 LCS_GDT P 71 P 71 5 8 17 3 4 5 6 8 8 8 9 12 14 15 17 17 18 20 22 23 23 24 25 LCS_GDT D 72 D 72 5 8 17 3 4 5 6 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT C 73 C 73 5 8 17 3 4 5 7 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT R 74 R 74 5 8 17 3 4 5 6 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT C 75 C 75 5 8 15 3 4 5 6 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT D 76 D 76 3 8 15 3 3 4 6 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT N 77 N 77 3 8 15 3 3 4 6 8 8 8 10 12 13 15 17 17 18 20 22 24 25 25 27 LCS_GDT L 78 L 78 3 4 15 3 3 3 4 5 6 8 10 10 11 13 13 16 18 20 22 24 25 25 27 LCS_GDT C 79 C 79 3 6 16 3 3 4 4 7 7 8 10 11 12 13 13 14 16 20 22 24 25 25 27 LCS_GDT K 80 K 80 4 6 16 3 4 4 4 6 7 8 10 11 12 12 13 14 16 20 22 24 25 25 27 LCS_GDT S 81 S 81 4 6 16 3 4 4 5 7 7 9 10 11 12 13 13 14 15 16 21 24 25 25 27 LCS_GDT Y 82 Y 82 4 7 16 3 4 4 7 7 8 9 10 11 12 13 13 14 15 16 16 17 19 21 22 LCS_GDT S 83 S 83 4 7 16 3 4 4 7 7 8 9 10 11 12 13 13 14 15 16 19 22 23 25 27 LCS_GDT S 84 S 84 3 7 16 3 3 4 7 7 8 9 10 11 12 13 13 14 15 16 16 18 20 22 23 LCS_GDT C 85 C 85 3 7 16 3 3 4 4 7 8 9 10 11 12 13 13 14 15 16 22 24 25 25 27 LCS_GDT C 86 C 86 3 7 16 3 3 4 7 7 8 9 10 11 12 13 13 14 17 20 22 24 25 25 27 LCS_GDT H 87 H 87 3 7 16 3 3 4 7 7 8 9 10 11 12 13 15 16 18 20 22 24 25 25 27 LCS_GDT D 88 D 88 3 7 16 3 3 4 7 8 8 9 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT F 89 F 89 3 5 16 3 3 5 6 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT D 90 D 90 3 4 16 3 4 5 7 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT E 91 E 91 3 4 16 3 3 4 5 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT L 92 L 92 3 4 16 3 3 4 4 4 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 LCS_GDT C 93 C 93 3 4 16 3 3 4 4 4 5 6 8 9 12 14 17 17 18 20 22 24 25 25 27 LCS_GDT L 94 L 94 3 4 16 0 3 3 3 4 5 6 7 9 11 12 15 17 18 20 22 24 25 25 27 LCS_GDT K 95 K 95 0 3 12 0 0 3 3 3 4 5 7 7 8 11 11 16 18 20 22 24 25 25 26 LCS_AVERAGE LCS_A: 21.94 ( 9.44 15.94 40.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 6 7 8 8 11 12 13 14 15 17 17 18 20 22 24 25 25 27 GDT PERCENT_AT 7.50 10.00 15.00 17.50 20.00 20.00 27.50 30.00 32.50 35.00 37.50 42.50 42.50 45.00 50.00 55.00 60.00 62.50 62.50 67.50 GDT RMS_LOCAL 0.02 0.39 1.00 1.36 1.68 1.68 2.73 2.87 3.02 3.32 3.66 4.09 4.09 4.47 4.92 5.39 6.49 6.58 6.58 7.44 GDT RMS_ALL_AT 21.64 16.04 20.86 17.20 17.08 17.08 12.95 12.84 12.86 13.35 13.13 13.17 13.17 12.95 13.13 13.06 12.34 12.09 12.09 11.24 # Checking swapping # possible swapping detected: F 63 F 63 # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # possible swapping detected: Y 82 Y 82 # possible swapping detected: F 89 F 89 # possible swapping detected: D 90 D 90 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 15.590 0 0.686 0.686 17.614 0.000 0.000 LGA S 57 S 57 18.872 0 0.159 0.580 22.322 0.000 0.000 LGA C 58 C 58 18.558 0 0.670 1.007 22.338 0.000 0.000 LGA K 59 K 59 22.761 0 0.194 0.724 29.310 0.000 0.000 LGA G 60 G 60 22.908 0 0.100 0.100 23.015 0.000 0.000 LGA R 61 R 61 17.650 0 0.733 1.342 19.614 0.000 0.000 LGA C 62 C 62 17.218 0 0.040 0.872 18.441 0.000 0.000 LGA F 63 F 63 18.418 0 0.526 1.099 25.196 0.000 0.000 LGA E 64 E 64 12.116 0 0.152 1.301 14.330 0.000 2.381 LGA L 65 L 65 10.973 0 0.112 1.439 14.701 2.976 1.488 LGA Q 66 Q 66 3.670 0 0.319 0.859 9.208 35.476 24.074 LGA E 67 E 67 3.313 0 0.119 1.122 7.639 57.500 32.963 LGA V 68 V 68 2.801 0 0.236 0.685 6.278 42.619 47.347 LGA G 69 G 69 6.944 0 0.194 0.194 9.696 10.714 10.714 LGA P 70 P 70 10.205 0 0.314 0.419 12.055 0.833 0.476 LGA P 71 P 71 7.377 0 0.541 0.716 8.793 16.905 11.769 LGA D 72 D 72 1.093 3 0.374 0.437 3.282 71.190 41.845 LGA C 73 C 73 3.096 0 0.158 0.555 8.532 52.262 38.889 LGA R 74 R 74 2.151 0 0.090 1.337 12.702 75.119 35.628 LGA C 75 C 75 3.527 0 0.576 0.507 4.540 43.690 43.571 LGA D 76 D 76 3.245 0 0.736 1.362 4.102 48.452 48.631 LGA N 77 N 77 6.789 0 0.463 0.883 9.212 9.762 7.083 LGA L 78 L 78 12.064 0 0.720 0.673 18.005 0.000 0.000 LGA C 79 C 79 13.477 0 0.547 0.801 15.738 0.000 0.000 LGA K 80 K 80 14.634 0 0.548 1.472 17.186 0.000 0.000 LGA S 81 S 81 20.021 0 0.080 0.712 22.830 0.000 0.000 LGA Y 82 Y 82 24.270 0 0.461 1.353 32.639 0.000 0.000 LGA S 83 S 83 19.873 0 0.334 0.768 22.907 0.000 0.000 LGA S 84 S 84 20.166 0 0.523 0.714 22.313 0.000 0.000 LGA C 85 C 85 14.301 0 0.134 0.212 16.528 0.000 0.000 LGA C 86 C 86 11.070 0 0.178 0.763 11.789 0.238 0.238 LGA H 87 H 87 9.247 0 0.613 1.237 10.805 8.333 5.810 LGA D 88 D 88 4.733 0 0.189 0.494 5.647 38.214 51.310 LGA F 89 F 89 1.968 0 0.511 1.601 8.855 59.524 34.719 LGA D 90 D 90 3.016 0 0.499 0.659 5.190 57.381 43.750 LGA E 91 E 91 2.043 0 0.114 1.199 7.784 66.786 44.233 LGA L 92 L 92 3.269 0 0.554 1.493 7.185 42.500 31.429 LGA C 93 C 93 7.796 0 0.434 0.717 10.042 7.143 5.238 LGA L 94 L 94 10.317 0 0.596 1.398 14.976 0.476 0.238 LGA K 95 K 95 10.482 0 0.090 0.922 13.278 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 10.555 10.477 11.575 18.702 14.096 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 12 2.87 28.125 25.048 0.405 LGA_LOCAL RMSD: 2.865 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.842 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 10.555 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.595723 * X + -0.789929 * Y + -0.145348 * Z + 21.636963 Y_new = 0.284862 * X + -0.376992 * Y + 0.881323 * Z + 88.993561 Z_new = -0.750978 * X + 0.483620 * Y + 0.449604 * Z + -26.312294 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.695554 0.849542 0.821832 [DEG: 154.4439 48.6752 47.0875 ] ZXZ: -2.978143 1.104475 -0.998660 [DEG: -170.6351 63.2817 -57.2190 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS245_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS245_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 12 2.87 25.048 10.55 REMARK ---------------------------------------------------------- MOLECULE T0543TS245_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 3ije_B 2gsu_A 1zm8_A ATOM 422 N GLY 56 30.138 58.678 21.383 1.00 0.00 4 ATOM 423 CA GLY 56 30.931 57.683 20.730 1.00 0.00 4 ATOM 424 C GLY 56 32.057 57.292 21.624 1.00 0.00 4 ATOM 425 O GLY 56 31.930 57.284 22.847 1.00 0.00 4 ATOM 426 N SER 57 33.189 56.915 21.004 1.00 0.00 4 ATOM 427 CA SER 57 34.379 56.577 21.721 1.00 0.00 4 ATOM 428 CB SER 57 34.949 55.194 21.361 1.00 0.00 4 ATOM 429 OG SER 57 35.352 55.171 19.999 1.00 0.00 4 ATOM 430 C SER 57 35.371 57.596 21.281 1.00 0.00 4 ATOM 431 O SER 57 35.195 58.210 20.234 1.00 0.00 4 ATOM 432 N CYS 58 36.412 57.867 22.086 1.00 0.00 4 ATOM 433 CA CYS 58 37.328 58.870 21.636 1.00 0.00 4 ATOM 434 CB CYS 58 37.322 60.163 22.474 1.00 0.00 4 ATOM 435 SG CYS 58 37.899 59.913 24.179 1.00 0.00 4 ATOM 436 C CYS 58 38.709 58.322 21.699 1.00 0.00 4 ATOM 437 O CYS 58 39.021 57.463 22.523 1.00 0.00 4 ATOM 438 N LYS 59 39.571 58.786 20.780 1.00 0.00 4 ATOM 439 CA LYS 59 40.935 58.367 20.841 1.00 0.00 4 ATOM 440 CB LYS 59 41.335 57.430 19.689 1.00 0.00 4 ATOM 441 CG LYS 59 40.625 56.076 19.737 1.00 0.00 4 ATOM 442 CD LYS 59 40.753 55.266 18.445 1.00 0.00 4 ATOM 443 CE LYS 59 40.044 53.911 18.499 1.00 0.00 4 ATOM 444 NZ LYS 59 40.217 53.197 17.214 1.00 0.00 4 ATOM 445 C LYS 59 41.763 59.603 20.724 1.00 0.00 4 ATOM 446 O LYS 59 42.190 59.976 19.633 1.00 0.00 4 ATOM 447 N GLY 60 41.982 60.297 21.860 1.00 0.00 4 ATOM 448 CA GLY 60 42.803 61.476 21.898 1.00 0.00 4 ATOM 449 C GLY 60 42.046 62.585 21.248 1.00 0.00 4 ATOM 450 O GLY 60 42.500 63.727 21.211 1.00 0.00 4 ATOM 451 N ARG 61 40.855 62.262 20.717 1.00 0.00 4 ATOM 452 CA ARG 61 40.059 63.226 20.037 1.00 0.00 4 ATOM 453 CB ARG 61 40.567 63.554 18.621 1.00 0.00 4 ATOM 454 CG ARG 61 40.604 62.340 17.692 1.00 0.00 4 ATOM 455 CD ARG 61 41.108 62.663 16.284 1.00 0.00 4 ATOM 456 NE ARG 61 42.576 62.908 16.381 1.00 0.00 4 ATOM 457 CZ ARG 61 43.305 63.151 15.253 1.00 0.00 4 ATOM 458 NH1 ARG 61 42.689 63.176 14.034 1.00 0.00 4 ATOM 459 NH2 ARG 61 44.649 63.369 15.342 1.00 0.00 4 ATOM 460 C ARG 61 38.710 62.620 19.891 1.00 0.00 4 ATOM 461 O ARG 61 38.449 61.518 20.368 1.00 0.00 4 ATOM 462 N CYS 62 37.814 63.359 19.221 1.00 0.00 4 ATOM 463 CA CYS 62 36.467 62.953 18.992 1.00 0.00 4 ATOM 464 CB CYS 62 35.647 64.057 18.302 1.00 0.00 4 ATOM 465 SG CYS 62 34.040 63.457 17.696 1.00 0.00 4 ATOM 466 C CYS 62 36.431 61.827 18.019 1.00 0.00 4 ATOM 467 O CYS 62 36.913 61.951 16.896 1.00 0.00 4 ATOM 468 N PHE 63 35.878 60.676 18.442 1.00 0.00 4 ATOM 469 CA PHE 63 35.560 59.691 17.458 1.00 0.00 4 ATOM 470 CB PHE 63 36.154 58.289 17.683 1.00 0.00 4 ATOM 471 CG PHE 63 35.741 57.450 16.524 1.00 0.00 4 ATOM 472 CD1 PHE 63 36.461 57.483 15.352 1.00 0.00 4 ATOM 473 CD2 PHE 63 34.638 56.632 16.605 1.00 0.00 4 ATOM 474 CE1 PHE 63 36.088 56.712 14.277 1.00 0.00 4 ATOM 475 CE2 PHE 63 34.260 55.859 15.532 1.00 0.00 4 ATOM 476 CZ PHE 63 34.985 55.898 14.365 1.00 0.00 4 ATOM 477 C PHE 63 34.080 59.635 17.588 1.00 0.00 4 ATOM 478 O PHE 63 33.545 59.310 18.647 1.00 0.00 4 ATOM 479 N GLU 64 33.369 59.971 16.506 1.00 0.00 4 ATOM 480 CA GLU 64 31.969 60.162 16.657 1.00 0.00 4 ATOM 481 CB GLU 64 31.475 61.373 15.845 1.00 0.00 4 ATOM 482 CG GLU 64 31.543 61.190 14.329 1.00 0.00 4 ATOM 483 CD GLU 64 30.112 60.980 13.866 1.00 0.00 4 ATOM 484 OE1 GLU 64 29.354 61.976 13.974 1.00 0.00 4 ATOM 485 OE2 GLU 64 29.742 59.863 13.419 1.00 0.00 4 ATOM 486 C GLU 64 31.178 58.964 16.249 1.00 0.00 4 ATOM 487 O GLU 64 31.154 58.585 15.085 1.00 0.00 4 ATOM 488 N LEU 65 30.535 58.305 17.231 1.00 0.00 4 ATOM 489 CA LEU 65 29.658 57.200 16.982 1.00 0.00 4 ATOM 490 CB LEU 65 29.290 56.439 18.266 1.00 0.00 4 ATOM 491 CG LEU 65 28.340 55.250 18.027 1.00 0.00 4 ATOM 492 CD1 LEU 65 29.011 54.172 17.156 1.00 0.00 4 ATOM 493 CD2 LEU 65 27.798 54.692 19.353 1.00 0.00 4 ATOM 494 C LEU 65 28.371 57.681 16.366 1.00 0.00 4 ATOM 495 O LEU 65 27.895 57.113 15.383 1.00 0.00 4 ATOM 496 N GLN 66 27.779 58.765 16.918 1.00 0.00 4 ATOM 497 CA GLN 66 26.481 59.219 16.486 1.00 0.00 4 ATOM 498 CB GLN 66 25.399 59.081 17.572 1.00 0.00 4 ATOM 499 CG GLN 66 23.977 59.337 17.064 1.00 0.00 4 ATOM 500 CD GLN 66 23.020 59.163 18.234 1.00 0.00 5 ATOM 501 OE1 GLN 66 23.436 59.093 19.389 1.00 0.00 5 ATOM 502 NE2 GLN 66 21.696 59.096 17.929 1.00 0.00 5 ATOM 503 C GLN 66 26.602 60.669 16.152 1.00 0.00 5 ATOM 504 O GLN 66 27.460 61.047 15.364 1.00 0.00 5 ATOM 505 N GLU 67 25.722 61.530 16.705 1.00 0.00 5 ATOM 506 CA GLU 67 25.859 62.941 16.482 1.00 0.00 5 ATOM 507 CB GLU 67 24.669 63.566 15.732 1.00 0.00 5 ATOM 508 CG GLU 67 24.539 63.089 14.284 1.00 0.00 5 ATOM 509 CD GLU 67 23.333 63.783 13.669 1.00 0.00 5 ATOM 510 OE1 GLU 67 22.678 64.581 14.391 1.00 0.00 5 ATOM 511 OE2 GLU 67 23.048 63.523 12.470 1.00 0.00 5 ATOM 512 C GLU 67 25.921 63.599 17.830 1.00 0.00 5 ATOM 513 O GLU 67 25.112 63.284 18.702 1.00 0.00 5 ATOM 514 N VAL 68 26.881 64.535 18.034 1.00 0.00 5 ATOM 515 CA VAL 68 27.021 65.205 19.303 1.00 0.00 5 ATOM 516 CB VAL 68 27.639 64.408 20.383 1.00 0.00 5 ATOM 517 CG1 VAL 68 26.568 63.499 21.008 1.00 0.00 5 ATOM 518 CG2 VAL 68 28.640 63.536 19.727 1.00 0.00 5 ATOM 519 C VAL 68 27.468 66.643 19.157 1.00 0.00 5 ATOM 520 O VAL 68 26.706 67.259 18.432 1.00 0.00 5 ATOM 521 N GLY 69 28.630 67.161 19.754 1.00 0.00 5 ATOM 522 CA GLY 69 29.160 68.548 19.956 1.00 0.00 5 ATOM 523 C GLY 69 30.458 69.050 19.227 1.00 0.00 5 ATOM 524 O GLY 69 30.602 68.995 18.013 1.00 0.00 5 ATOM 525 N PRO 70 31.383 69.697 19.965 1.00 0.00 5 ATOM 526 CA PRO 70 32.710 70.196 19.535 1.00 0.00 5 ATOM 527 CD PRO 70 30.957 70.323 21.206 1.00 0.00 5 ATOM 528 CB PRO 70 32.959 71.421 20.426 1.00 0.00 5 ATOM 529 CG PRO 70 32.155 71.150 21.695 1.00 0.00 5 ATOM 530 C PRO 70 33.872 69.147 19.423 1.00 0.00 5 ATOM 531 O PRO 70 33.596 68.172 18.726 1.00 0.00 5 ATOM 532 N PRO 71 35.144 69.198 19.931 1.00 0.00 5 ATOM 533 CA PRO 71 35.948 67.986 20.133 1.00 0.00 5 ATOM 534 CD PRO 71 35.820 70.361 20.511 1.00 0.00 5 ATOM 535 CB PRO 71 37.208 68.423 20.882 1.00 0.00 5 ATOM 536 CG PRO 71 37.286 69.941 20.675 1.00 0.00 5 ATOM 537 C PRO 71 35.286 66.787 20.851 1.00 0.00 5 ATOM 538 O PRO 71 34.815 66.001 20.048 1.00 0.00 5 ATOM 539 N ASP 72 35.197 66.652 22.253 1.00 0.00 5 ATOM 540 CA ASP 72 34.557 65.659 23.166 1.00 0.00 5 ATOM 541 CB ASP 72 35.504 65.175 24.274 1.00 0.00 5 ATOM 542 CG ASP 72 36.625 64.389 23.606 1.00 0.00 5 ATOM 543 OD1 ASP 72 36.671 64.383 22.347 1.00 0.00 5 ATOM 544 OD2 ASP 72 37.447 63.783 24.343 1.00 0.00 5 ATOM 545 C ASP 72 33.260 66.166 23.879 1.00 0.00 5 ATOM 546 O ASP 72 33.286 66.663 24.998 1.00 0.00 5 ATOM 547 N CYS 73 32.085 65.899 23.217 1.00 0.00 5 ATOM 548 CA CYS 73 30.663 66.271 23.038 1.00 0.00 5 ATOM 549 CB CYS 73 29.588 65.408 22.356 1.00 0.00 5 ATOM 550 SG CYS 73 29.109 63.778 22.982 1.00 0.00 5 ATOM 551 C CYS 73 30.094 67.357 23.819 1.00 0.00 5 ATOM 552 O CYS 73 30.738 67.737 24.785 1.00 0.00 5 ATOM 553 N ARG 74 29.037 68.003 23.278 1.00 0.00 5 ATOM 554 CA ARG 74 28.371 69.074 23.960 1.00 0.00 5 ATOM 555 CB ARG 74 29.170 70.396 23.931 1.00 0.00 5 ATOM 556 CG ARG 74 30.684 70.376 24.213 1.00 0.00 5 ATOM 557 CD ARG 74 31.234 70.266 25.643 1.00 0.00 5 ATOM 558 NE ARG 74 32.619 69.725 25.531 1.00 0.00 5 ATOM 559 CZ ARG 74 33.624 70.476 24.993 1.00 0.00 5 ATOM 560 NH1 ARG 74 33.345 71.668 24.391 1.00 0.00 5 ATOM 561 NH2 ARG 74 34.908 70.012 25.018 1.00 0.00 5 ATOM 562 C ARG 74 27.115 69.507 23.239 1.00 0.00 5 ATOM 563 O ARG 74 27.227 69.665 22.026 1.00 0.00 5 ATOM 564 N CYS 75 25.931 69.694 23.946 1.00 0.00 5 ATOM 565 CA CYS 75 24.846 70.605 23.507 1.00 0.00 5 ATOM 566 CB CYS 75 25.087 71.357 22.252 1.00 0.00 5 ATOM 567 SG CYS 75 26.485 72.359 22.442 1.00 0.00 5 ATOM 568 C CYS 75 23.468 70.205 23.069 1.00 0.00 5 ATOM 569 O CYS 75 22.894 69.173 23.407 1.00 0.00 5 ATOM 570 N ASP 76 23.024 71.161 22.179 1.00 0.00 5 ATOM 571 CA ASP 76 21.952 71.239 21.215 1.00 0.00 5 ATOM 572 CB ASP 76 20.953 70.081 21.353 1.00 0.00 5 ATOM 573 CG ASP 76 21.610 68.863 20.747 1.00 0.00 5 ATOM 574 OD1 ASP 76 22.388 69.070 19.780 1.00 0.00 5 ATOM 575 OD2 ASP 76 21.347 67.726 21.222 1.00 0.00 5 ATOM 576 C ASP 76 21.100 72.515 20.876 1.00 0.00 5 ATOM 577 O ASP 76 20.380 72.291 19.915 1.00 0.00 5 ATOM 578 N ASN 77 21.040 73.820 21.424 1.00 0.00 5 ATOM 579 CA ASN 77 19.922 74.837 21.214 1.00 0.00 5 ATOM 580 CB ASN 77 19.153 75.490 22.424 1.00 0.00 5 ATOM 581 CG ASN 77 17.615 75.244 22.591 1.00 0.00 5 ATOM 582 OD1 ASN 77 17.089 74.858 23.633 1.00 0.00 5 ATOM 583 ND2 ASN 77 16.829 75.534 21.516 1.00 0.00 5 ATOM 584 C ASN 77 20.124 76.215 20.596 1.00 0.00 5 ATOM 585 O ASN 77 20.962 76.533 19.756 1.00 0.00 5 ATOM 586 N LEU 78 19.048 76.985 20.955 1.00 0.00 5 ATOM 587 CA LEU 78 18.481 78.286 20.686 1.00 0.00 5 ATOM 588 CB LEU 78 17.646 78.215 19.415 1.00 0.00 5 ATOM 589 CG LEU 78 17.167 79.500 18.791 1.00 0.00 5 ATOM 590 CD1 LEU 78 18.349 80.450 18.591 1.00 0.00 5 ATOM 591 CD2 LEU 78 16.483 79.122 17.466 1.00 0.00 5 ATOM 592 C LEU 78 17.549 78.585 21.849 1.00 0.00 5 ATOM 593 O LEU 78 17.625 77.945 22.892 1.00 0.00 5 ATOM 594 N CYS 79 16.672 79.610 21.777 1.00 0.00 5 ATOM 595 CA CYS 79 15.729 79.674 22.867 1.00 0.00 5 ATOM 596 CB CYS 79 16.081 80.502 24.102 1.00 0.00 5 ATOM 597 SG CYS 79 15.086 80.122 25.583 1.00 0.00 5 ATOM 598 C CYS 79 14.455 80.205 22.345 1.00 0.00 5 ATOM 599 O CYS 79 14.138 80.000 21.186 1.00 0.00 5 ATOM 600 N LYS 80 13.758 81.023 23.140 1.00 0.00 6 ATOM 601 CA LYS 80 12.427 81.442 22.842 1.00 0.00 6 ATOM 602 CB LYS 80 11.784 82.259 23.973 1.00 0.00 6 ATOM 603 CG LYS 80 10.256 82.334 23.898 1.00 0.00 6 ATOM 604 CD LYS 80 9.598 82.810 25.195 1.00 0.00 6 ATOM 605 CE LYS 80 9.624 81.766 26.314 1.00 0.00 6 ATOM 606 NZ LYS 80 10.998 81.629 26.848 1.00 0.00 6 ATOM 607 C LYS 80 12.257 82.063 21.477 1.00 0.00 6 ATOM 608 O LYS 80 13.192 82.271 20.706 1.00 0.00 6 ATOM 609 N SER 81 11.009 82.443 21.181 1.00 0.00 6 ATOM 610 CA SER 81 10.470 82.702 19.872 1.00 0.00 6 ATOM 611 CB SER 81 9.181 83.541 19.925 1.00 0.00 6 ATOM 612 OG SER 81 8.693 83.766 18.610 1.00 0.00 6 ATOM 613 C SER 81 11.394 83.381 18.923 1.00 0.00 6 ATOM 614 O SER 81 11.637 82.833 17.851 1.00 0.00 6 ATOM 615 N TYR 82 11.941 84.573 19.208 1.00 0.00 6 ATOM 616 CA TYR 82 12.810 85.013 18.165 1.00 0.00 6 ATOM 617 CB TYR 82 12.819 86.519 17.875 1.00 0.00 6 ATOM 618 CG TYR 82 11.566 86.789 17.114 1.00 0.00 6 ATOM 619 CD1 TYR 82 10.337 86.729 17.727 1.00 0.00 6 ATOM 620 CD2 TYR 82 11.624 87.107 15.776 1.00 0.00 6 ATOM 621 CE1 TYR 82 9.184 86.978 17.020 1.00 0.00 6 ATOM 622 CE2 TYR 82 10.476 87.358 15.061 1.00 0.00 6 ATOM 623 CZ TYR 82 9.253 87.293 15.685 1.00 0.00 6 ATOM 624 OH TYR 82 8.073 87.550 14.955 1.00 0.00 6 ATOM 625 C TYR 82 14.124 84.432 18.474 1.00 0.00 6 ATOM 626 O TYR 82 15.021 85.023 19.074 1.00 0.00 6 ATOM 627 N SER 83 14.211 83.206 17.945 1.00 0.00 6 ATOM 628 CA SER 83 15.187 82.190 18.064 1.00 0.00 6 ATOM 629 CB SER 83 14.540 80.937 18.655 1.00 0.00 6 ATOM 630 OG SER 83 13.554 80.432 17.766 1.00 0.00 6 ATOM 631 C SER 83 15.636 81.865 16.684 1.00 0.00 6 ATOM 632 O SER 83 14.827 81.758 15.771 1.00 0.00 6 ATOM 633 N SER 84 16.955 81.728 16.490 1.00 0.00 6 ATOM 634 CA SER 84 17.470 81.420 15.207 1.00 0.00 6 ATOM 635 CB SER 84 18.343 82.535 14.607 1.00 0.00 6 ATOM 636 OG SER 84 17.560 83.696 14.373 1.00 0.00 6 ATOM 637 C SER 84 18.340 80.274 15.488 1.00 0.00 6 ATOM 638 O SER 84 19.403 80.449 16.087 1.00 0.00 6 ATOM 639 N CYS 85 17.870 79.100 15.021 1.00 0.00 6 ATOM 640 CA CYS 85 18.436 77.805 15.213 1.00 0.00 6 ATOM 641 CB CYS 85 17.944 76.883 14.080 1.00 0.00 6 ATOM 642 SG CYS 85 16.156 76.578 14.169 1.00 0.00 6 ATOM 643 C CYS 85 19.884 78.009 15.055 1.00 0.00 6 ATOM 644 O CYS 85 20.243 78.569 14.034 1.00 0.00 6 ATOM 645 N CYS 86 20.716 77.632 16.064 1.00 0.00 6 ATOM 646 CA CYS 86 22.132 77.918 16.054 1.00 0.00 6 ATOM 647 CB CYS 86 22.561 78.912 17.160 1.00 0.00 6 ATOM 648 SG CYS 86 24.243 79.620 16.986 1.00 0.00 6 ATOM 649 C CYS 86 22.899 76.640 16.249 1.00 0.00 6 ATOM 650 O CYS 86 22.393 75.555 15.976 1.00 0.00 6 ATOM 651 N HIS 87 24.168 76.744 16.705 1.00 0.00 6 ATOM 652 CA HIS 87 25.002 75.598 16.832 1.00 0.00 6 ATOM 653 ND1 HIS 87 28.214 75.053 15.747 1.00 0.00 6 ATOM 654 CG HIS 87 27.131 75.665 15.187 1.00 0.00 6 ATOM 655 CB HIS 87 25.722 75.280 15.512 1.00 0.00 6 ATOM 656 NE2 HIS 87 29.022 76.357 14.161 1.00 0.00 6 ATOM 657 CD2 HIS 87 27.647 76.458 14.216 1.00 0.00 6 ATOM 658 CE1 HIS 87 29.319 75.500 15.113 1.00 0.00 6 ATOM 659 C HIS 87 26.048 75.811 17.870 1.00 0.00 6 ATOM 660 O HIS 87 26.123 76.855 18.517 1.00 0.00 6 ATOM 661 N ASP 88 26.856 74.753 18.066 1.00 0.00 6 ATOM 662 CA ASP 88 28.043 74.722 18.866 1.00 0.00 6 ATOM 663 CB ASP 88 29.294 75.347 18.266 1.00 0.00 6 ATOM 664 CG ASP 88 29.192 76.782 17.860 1.00 0.00 6 ATOM 665 OD1 ASP 88 28.245 77.273 17.193 1.00 0.00 6 ATOM 666 OD2 ASP 88 30.189 77.428 18.236 1.00 0.00 6 ATOM 667 C ASP 88 27.894 75.353 20.163 1.00 0.00 6 ATOM 668 O ASP 88 28.646 76.268 20.495 1.00 0.00 6 ATOM 669 N PHE 89 26.985 74.807 20.961 1.00 0.00 6 ATOM 670 CA PHE 89 26.783 75.390 22.229 1.00 0.00 6 ATOM 671 CB PHE 89 27.974 75.254 23.296 1.00 0.00 6 ATOM 672 CG PHE 89 28.239 74.078 24.317 1.00 0.00 6 ATOM 673 CD1 PHE 89 27.409 73.267 25.102 1.00 0.00 6 ATOM 674 CD2 PHE 89 29.528 73.830 24.662 1.00 0.00 6 ATOM 675 CE1 PHE 89 27.733 72.300 26.014 1.00 0.00 6 ATOM 676 CE2 PHE 89 29.940 72.896 25.580 1.00 0.00 6 ATOM 677 CZ PHE 89 29.053 72.108 26.267 1.00 0.00 6 ATOM 678 C PHE 89 26.463 76.844 22.002 1.00 0.00 6 ATOM 679 O PHE 89 27.064 77.644 22.698 1.00 0.00 6 ATOM 680 N ASP 90 25.532 77.240 21.055 1.00 0.00 6 ATOM 681 CA ASP 90 25.091 78.633 20.985 1.00 0.00 6 ATOM 682 CB ASP 90 26.121 79.676 20.686 1.00 0.00 6 ATOM 683 CG ASP 90 26.217 80.183 22.087 1.00 0.00 6 ATOM 684 OD1 ASP 90 25.183 80.651 22.623 1.00 0.00 6 ATOM 685 OD2 ASP 90 27.327 80.135 22.645 1.00 0.00 6 ATOM 686 C ASP 90 23.795 79.112 20.358 1.00 0.00 6 ATOM 687 O ASP 90 22.979 78.374 19.811 1.00 0.00 6 ATOM 688 N GLU 91 23.655 80.465 20.515 1.00 0.00 6 ATOM 689 CA GLU 91 22.610 81.451 20.349 1.00 0.00 6 ATOM 690 CB GLU 91 23.039 82.831 20.857 1.00 0.00 6 ATOM 691 CG GLU 91 23.222 82.869 22.365 1.00 0.00 6 ATOM 692 CD GLU 91 21.841 82.726 22.975 1.00 0.00 6 ATOM 693 OE1 GLU 91 20.913 82.210 22.300 1.00 0.00 6 ATOM 694 OE2 GLU 91 21.699 83.143 24.148 1.00 0.00 6 ATOM 695 C GLU 91 22.006 81.708 19.021 1.00 0.00 6 ATOM 696 O GLU 91 20.781 81.670 18.951 1.00 0.00 6 ATOM 697 N LEU 92 22.823 81.957 17.978 1.00 0.00 6 ATOM 698 CA LEU 92 22.415 82.416 16.672 1.00 0.00 6 ATOM 699 CB LEU 92 21.954 81.372 15.659 1.00 0.00 6 ATOM 700 CG LEU 92 21.327 82.131 14.484 1.00 0.00 7 ATOM 701 CD1 LEU 92 22.329 83.127 13.891 1.00 0.00 7 ATOM 702 CD2 LEU 92 20.702 81.200 13.444 1.00 0.00 7 ATOM 703 C LEU 92 21.286 83.324 16.840 1.00 0.00 7 ATOM 704 O LEU 92 20.121 82.921 16.872 1.00 0.00 7 ATOM 705 N CYS 93 21.567 84.623 16.825 1.00 0.00 7 ATOM 706 CA CYS 93 20.461 85.144 17.449 1.00 0.00 7 ATOM 707 CB CYS 93 20.790 84.515 18.975 1.00 0.00 7 ATOM 708 SG CYS 93 20.465 84.596 20.857 1.00 0.00 7 ATOM 709 C CYS 93 19.974 86.463 16.663 1.00 0.00 7 ATOM 710 O CYS 93 19.665 86.313 15.488 1.00 0.00 7 ATOM 711 N LEU 94 19.807 87.736 17.175 1.00 0.00 7 ATOM 712 CA LEU 94 19.211 88.742 16.293 1.00 0.00 7 ATOM 713 CB LEU 94 17.752 89.170 16.413 1.00 0.00 7 ATOM 714 CG LEU 94 17.038 89.346 15.090 1.00 0.00 7 ATOM 715 CD1 LEU 94 17.028 87.961 14.476 1.00 0.00 7 ATOM 716 CD2 LEU 94 15.644 89.981 15.231 1.00 0.00 7 ATOM 717 C LEU 94 19.794 90.113 16.461 1.00 0.00 7 ATOM 718 O LEU 94 20.896 90.265 16.948 1.00 0.00 7 ATOM 719 N LYS 95 18.974 91.135 16.036 1.00 0.00 7 ATOM 720 CA LYS 95 19.179 92.564 15.828 1.00 0.00 7 ATOM 721 CB LYS 95 18.792 92.920 14.386 1.00 0.00 7 ATOM 722 CG LYS 95 19.103 94.332 13.929 1.00 0.00 7 ATOM 723 CD LYS 95 19.123 94.451 12.407 1.00 0.00 7 ATOM 724 CE LYS 95 20.407 93.922 11.766 1.00 0.00 7 ATOM 725 NZ LYS 95 20.339 94.076 10.294 1.00 0.00 7 ATOM 726 C LYS 95 18.353 93.429 16.721 1.00 0.00 7 ATOM 727 O LYS 95 17.125 93.354 16.675 1.00 0.00 7 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 91.47 28.2 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 88.50 35.7 56 100.0 56 ARMSMC BURIED . . . . . . . . 98.63 9.1 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.83 22.2 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 93.97 22.9 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 92.37 16.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 97.06 36.4 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.35 26.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 78.59 35.3 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 94.22 33.3 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 80.21 0.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.20 44.4 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 63.00 50.0 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 44.19 57.1 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 100.11 0.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.75 20.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 65.75 20.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 50.50 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 106.82 0.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.55 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.55 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.2639 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 11.27 29 100.0 29 CRMSCA BURIED . . . . . . . . 8.40 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.63 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 11.33 142 100.0 142 CRMSMC BURIED . . . . . . . . 8.55 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.76 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 12.94 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 13.87 103 100.0 103 CRMSSC BURIED . . . . . . . . 9.32 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.62 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 12.49 219 100.0 219 CRMSALL BURIED . . . . . . . . 8.93 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.813 1.000 0.500 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 10.662 1.000 0.500 29 100.0 29 ERRCA BURIED . . . . . . . . 7.576 1.000 0.500 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.841 1.000 0.500 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 10.685 1.000 0.500 142 100.0 142 ERRMC BURIED . . . . . . . . 7.661 1.000 0.500 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.642 1.000 0.500 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 11.763 1.000 0.500 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 12.932 1.000 0.500 103 100.0 103 ERRSC BURIED . . . . . . . . 8.320 1.000 0.500 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.640 1.000 0.500 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 11.658 1.000 0.500 219 100.0 219 ERRALL BURIED . . . . . . . . 7.986 1.000 0.500 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 6 22 40 40 DISTCA CA (P) 0.00 0.00 2.50 15.00 55.00 40 DISTCA CA (RMS) 0.00 0.00 3.00 3.57 7.36 DISTCA ALL (N) 0 1 16 44 134 303 303 DISTALL ALL (P) 0.00 0.33 5.28 14.52 44.22 303 DISTALL ALL (RMS) 0.00 1.99 2.61 3.48 6.78 DISTALL END of the results output