####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS236_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS236_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 112 - 139 4.82 11.26 LONGEST_CONTINUOUS_SEGMENT: 28 113 - 140 4.95 10.96 LCS_AVERAGE: 55.90 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 117 - 132 1.98 11.20 LONGEST_CONTINUOUS_SEGMENT: 16 118 - 133 1.77 11.60 LCS_AVERAGE: 22.17 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 121 - 131 0.99 13.20 LCS_AVERAGE: 13.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 4 5 20 3 4 4 5 6 7 9 10 13 16 18 18 19 19 19 20 20 21 22 27 LCS_GDT A 97 A 97 4 5 20 3 4 4 5 5 7 9 10 13 16 18 18 19 19 19 20 21 26 28 31 LCS_GDT R 98 R 98 4 5 20 3 4 4 5 5 7 9 10 13 15 18 18 19 19 19 23 28 30 32 34 LCS_GDT G 99 G 99 4 5 20 3 4 4 5 7 8 10 13 14 16 18 18 19 19 19 21 26 30 31 33 LCS_GDT W 100 W 100 3 5 20 3 3 4 5 5 5 10 13 14 16 18 18 19 19 19 20 24 26 27 29 LCS_GDT E 101 E 101 3 5 20 3 3 5 6 7 8 10 13 14 16 18 18 19 19 19 20 22 25 27 29 LCS_GDT C 102 C 102 4 5 20 3 4 4 4 5 7 10 13 14 16 18 18 19 19 19 20 24 26 28 31 LCS_GDT T 103 T 103 4 5 20 3 4 4 6 7 8 10 13 14 16 18 18 19 24 27 27 29 30 32 34 LCS_GDT K 104 K 104 4 5 20 3 4 4 4 5 5 8 10 13 16 18 18 19 23 25 26 29 30 32 33 LCS_GDT D 105 D 105 4 5 20 3 4 4 5 7 8 10 13 14 16 21 24 24 27 28 29 29 30 32 34 LCS_GDT R 106 R 106 4 6 20 3 4 5 6 7 9 10 13 14 17 21 24 24 27 28 31 31 32 33 34 LCS_GDT C 107 C 107 4 6 20 3 4 5 6 7 8 10 13 14 17 21 24 24 27 28 31 31 32 33 34 LCS_GDT G 108 G 108 4 6 20 3 4 5 6 7 8 10 13 14 16 21 24 24 27 29 31 31 32 33 34 LCS_GDT E 109 E 109 5 7 20 3 4 6 6 7 8 10 13 14 17 21 24 24 27 29 31 31 32 33 34 LCS_GDT V 110 V 110 5 7 20 3 4 6 6 7 9 10 11 14 16 18 18 20 23 29 31 31 32 33 34 LCS_GDT R 111 R 111 5 7 20 3 4 6 6 7 9 10 13 14 16 18 18 19 19 20 26 27 30 31 34 LCS_GDT N 112 N 112 5 7 28 3 4 5 5 7 9 10 13 14 16 18 23 25 27 29 31 31 32 33 34 LCS_GDT E 113 E 113 5 7 28 3 4 6 6 7 9 10 13 14 16 18 18 19 23 25 29 29 31 33 34 LCS_GDT E 114 E 114 4 7 28 3 4 6 6 7 9 10 11 13 17 20 23 25 27 29 31 31 32 33 34 LCS_GDT N 115 N 115 4 7 28 3 4 6 6 7 9 13 17 21 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT A 116 A 116 6 9 28 3 5 8 12 16 16 16 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT C 117 C 117 6 16 28 3 5 8 12 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT H 118 H 118 6 16 28 3 5 8 12 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT C 119 C 119 6 16 28 3 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT S 120 S 120 6 16 28 4 7 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT E 121 E 121 11 16 28 4 8 12 14 16 16 17 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT D 122 D 122 11 16 28 5 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT C 123 C 123 11 16 28 5 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT L 124 L 124 11 16 28 5 8 12 14 14 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT S 125 S 125 11 16 28 5 8 12 14 14 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT R 126 R 126 11 16 28 4 8 12 14 14 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT G 127 G 127 11 16 28 4 8 12 14 14 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT D 128 D 128 11 16 28 5 8 12 14 14 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT C 129 C 129 11 16 28 5 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT C 130 C 130 11 16 28 5 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT T 131 T 131 11 16 28 4 7 10 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT N 132 N 132 6 16 28 5 6 10 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT Y 133 Y 133 6 16 28 5 6 9 12 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT Q 134 Q 134 6 9 28 5 6 9 12 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT V 135 V 135 6 9 28 5 6 9 11 16 16 18 20 22 22 24 24 25 26 29 31 31 32 33 34 LCS_GDT V 136 V 136 6 9 28 5 6 9 10 16 16 18 20 22 22 24 24 25 26 29 31 31 32 33 34 LCS_GDT C 137 C 137 3 9 28 3 3 4 4 4 7 13 15 17 21 22 24 25 26 27 27 27 29 32 34 LCS_GDT K 138 K 138 3 5 28 3 3 4 4 4 5 8 14 19 22 24 24 25 26 27 27 30 32 33 34 LCS_GDT G 139 G 139 3 5 28 3 3 4 4 4 5 17 18 22 22 24 24 25 27 29 31 31 32 33 34 LCS_GDT E 140 E 140 3 5 28 3 3 4 4 4 5 15 18 18 19 21 24 24 27 29 31 31 32 33 34 LCS_AVERAGE LCS_A: 30.57 ( 13.63 22.17 55.90 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 12 14 16 16 18 20 22 22 24 24 25 27 29 31 31 32 33 34 GDT PERCENT_AT 11.11 17.78 26.67 31.11 35.56 35.56 40.00 44.44 48.89 48.89 53.33 53.33 55.56 60.00 64.44 68.89 68.89 71.11 73.33 75.56 GDT RMS_LOCAL 0.20 0.67 1.11 1.30 1.67 1.67 2.70 2.81 3.04 3.04 3.42 3.42 3.65 4.78 5.14 5.42 5.42 5.57 5.82 6.02 GDT RMS_ALL_AT 14.61 13.05 12.26 12.22 11.50 11.50 11.34 11.34 11.16 11.16 11.11 11.11 11.29 10.40 10.69 10.44 10.44 10.50 10.39 10.52 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 109 E 109 # possible swapping detected: E 113 E 113 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # possible swapping detected: D 122 D 122 # possible swapping detected: D 128 D 128 # possible swapping detected: Y 133 Y 133 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 24.452 0 0.384 0.535 26.953 0.000 0.000 LGA A 97 A 97 20.284 0 0.526 0.546 21.841 0.000 0.000 LGA R 98 R 98 15.656 0 0.347 1.051 19.412 0.000 0.000 LGA G 99 G 99 18.277 0 0.262 0.262 19.698 0.000 0.000 LGA W 100 W 100 20.166 0 0.627 0.959 22.921 0.000 0.000 LGA E 101 E 101 22.840 0 0.575 1.223 25.265 0.000 0.000 LGA C 102 C 102 20.682 0 0.448 0.526 24.754 0.000 0.000 LGA T 103 T 103 15.560 0 0.107 1.191 17.370 0.000 0.000 LGA K 104 K 104 18.177 0 0.052 0.632 25.276 0.000 0.000 LGA D 105 D 105 14.149 0 0.375 0.952 15.864 0.000 0.000 LGA R 106 R 106 10.286 0 0.792 1.606 16.732 0.000 0.000 LGA C 107 C 107 11.973 0 0.665 0.629 13.159 0.000 0.000 LGA G 108 G 108 12.622 0 0.040 0.040 13.316 0.000 0.000 LGA E 109 E 109 12.103 0 0.584 1.141 15.339 0.000 0.000 LGA V 110 V 110 14.648 0 0.112 1.061 15.472 0.000 0.000 LGA R 111 R 111 16.733 0 0.057 0.976 20.279 0.000 0.000 LGA N 112 N 112 12.388 0 0.177 0.796 13.564 0.000 3.155 LGA E 113 E 113 15.901 0 0.248 0.927 23.305 0.000 0.000 LGA E 114 E 114 12.092 0 0.685 1.187 16.321 2.143 0.952 LGA N 115 N 115 7.171 0 0.069 1.263 9.334 8.929 7.381 LGA A 116 A 116 5.355 0 0.588 0.585 6.216 27.619 25.524 LGA C 117 C 117 3.611 0 0.175 0.640 4.046 48.690 49.127 LGA H 118 H 118 2.807 0 0.032 1.138 8.338 55.476 34.190 LGA C 119 C 119 2.483 0 0.588 0.867 5.256 63.333 56.111 LGA S 120 S 120 2.094 0 0.176 0.762 3.318 66.786 63.651 LGA E 121 E 121 3.217 0 0.145 1.095 8.842 55.476 34.497 LGA D 122 D 122 2.507 0 0.263 0.851 5.657 67.143 49.702 LGA C 123 C 123 0.733 0 0.078 0.790 4.309 81.667 75.714 LGA L 124 L 124 3.260 0 0.064 1.163 5.212 49.405 40.476 LGA S 125 S 125 3.220 0 0.179 0.561 5.344 44.167 47.460 LGA R 126 R 126 3.760 0 0.190 0.862 6.662 37.976 34.848 LGA G 127 G 127 3.219 0 0.394 0.394 4.344 46.786 46.786 LGA D 128 D 128 2.903 0 0.348 1.324 7.230 62.976 41.548 LGA C 129 C 129 0.266 0 0.174 0.323 1.291 88.333 89.048 LGA C 130 C 130 1.344 0 0.047 0.719 2.160 77.381 73.175 LGA T 131 T 131 2.740 0 0.234 1.064 4.439 64.881 55.714 LGA N 132 N 132 1.530 0 0.154 0.918 2.290 81.667 75.238 LGA Y 133 Y 133 0.617 0 0.123 1.120 6.370 77.738 58.214 LGA Q 134 Q 134 3.529 0 0.096 0.889 9.068 41.667 27.143 LGA V 135 V 135 3.496 0 0.435 0.984 4.534 46.905 45.646 LGA V 136 V 136 4.331 0 0.643 0.850 7.306 27.976 26.122 LGA C 137 C 137 7.942 0 0.632 0.948 11.513 14.762 9.841 LGA K 138 K 138 6.138 0 0.562 1.145 13.956 18.452 8.995 LGA G 139 G 139 4.669 0 0.521 0.521 7.114 21.548 21.548 LGA E 140 E 140 10.329 0 0.137 0.690 17.761 2.143 0.952 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 8.990 8.967 9.983 28.489 24.506 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 20 2.81 40.556 36.498 0.687 LGA_LOCAL RMSD: 2.812 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.340 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 8.990 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.079370 * X + -0.958368 * Y + 0.274284 * Z + -72.689835 Y_new = -0.792278 * X + -0.106340 * Y + -0.600823 * Z + -42.941277 Z_new = 0.604976 * X + -0.264996 * Y + -0.750853 * Z + -33.916172 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.670643 -0.649736 -2.802313 [DEG: -95.7208 -37.2271 -160.5607 ] ZXZ: 0.428258 2.420149 1.983650 [DEG: 24.5374 138.6643 113.6548 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS236_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS236_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 20 2.81 36.498 8.99 REMARK ---------------------------------------------------------- MOLECULE T0543TS236_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 728 N THR 96 8.629 108.072 22.862 1.00 30.00 N ATOM 729 CA THR 96 10.083 108.141 22.787 1.00 30.00 C ATOM 730 C THR 96 10.822 107.700 24.037 1.00 30.00 C ATOM 731 O THR 96 11.539 108.461 24.686 1.00 30.00 O ATOM 732 CB THR 96 10.579 109.529 22.385 1.00 30.00 C ATOM 733 OG1 THR 96 9.718 110.122 21.422 1.00 30.00 O ATOM 734 CG2 THR 96 11.991 109.481 21.771 1.00 30.00 C ATOM 735 N ALA 97 10.685 106.406 24.357 1.00 30.00 N ATOM 736 CA ALA 97 11.588 105.660 25.205 1.00 30.00 C ATOM 737 C ALA 97 12.038 104.503 24.341 1.00 30.00 C ATOM 738 O ALA 97 13.222 104.334 24.054 1.00 30.00 O ATOM 739 CB ALA 97 10.871 105.162 26.479 1.00 30.00 C ATOM 740 N ARG 98 11.063 103.702 23.851 1.00 30.00 N ATOM 741 CA ARG 98 11.307 102.598 22.958 1.00 30.00 C ATOM 742 C ARG 98 11.169 103.013 21.503 1.00 30.00 C ATOM 743 O ARG 98 10.199 102.711 20.804 1.00 30.00 O ATOM 744 CB ARG 98 10.374 101.402 23.310 1.00 30.00 C ATOM 745 CG ARG 98 8.869 101.712 23.446 1.00 30.00 C ATOM 746 CD ARG 98 8.058 100.473 23.855 1.00 30.00 C ATOM 747 NE ARG 98 6.614 100.868 23.947 1.00 30.00 N ATOM 748 CZ ARG 98 5.658 100.038 24.462 1.00 30.00 C ATOM 749 NH1 ARG 98 4.363 100.461 24.508 1.00 30.00 H ATOM 750 NH2 ARG 98 6.001 98.803 24.924 1.00 30.00 H ATOM 751 N GLY 99 12.197 103.737 21.011 1.00 30.00 N ATOM 752 CA GLY 99 12.199 104.284 19.668 1.00 30.00 C ATOM 753 C GLY 99 13.311 103.744 18.845 1.00 30.00 C ATOM 754 O GLY 99 14.477 103.845 19.220 1.00 30.00 O ATOM 755 N TRP 100 12.961 103.198 17.664 1.00 30.00 N ATOM 756 CA TRP 100 13.936 102.877 16.657 1.00 30.00 C ATOM 757 C TRP 100 14.016 104.085 15.745 1.00 30.00 C ATOM 758 O TRP 100 12.998 104.671 15.384 1.00 30.00 O ATOM 759 CB TRP 100 13.545 101.594 15.883 1.00 30.00 C ATOM 760 CG TRP 100 14.509 100.422 16.018 1.00 30.00 C ATOM 761 CD1 TRP 100 14.905 99.568 15.027 1.00 30.00 C ATOM 762 CD2 TRP 100 15.097 99.922 17.242 1.00 30.00 C ATOM 763 NE1 TRP 100 15.702 98.572 15.546 1.00 30.00 N ATOM 764 CE2 TRP 100 15.839 98.772 16.900 1.00 30.00 C ATOM 765 CE3 TRP 100 15.021 100.348 18.569 1.00 30.00 C ATOM 766 CZ2 TRP 100 16.514 98.038 17.869 1.00 30.00 C ATOM 767 CZ3 TRP 100 15.714 99.613 19.543 1.00 30.00 C ATOM 768 CH2 TRP 100 16.453 98.476 19.198 1.00 30.00 H ATOM 769 N GLU 101 15.252 104.539 15.431 1.00 30.00 N ATOM 770 CA GLU 101 15.479 105.905 15.015 1.00 30.00 C ATOM 771 C GLU 101 14.930 106.266 13.652 1.00 30.00 C ATOM 772 O GLU 101 14.158 107.215 13.520 1.00 30.00 O ATOM 773 CB GLU 101 16.994 106.279 15.063 1.00 30.00 C ATOM 774 CG GLU 101 17.606 106.448 16.487 1.00 30.00 C ATOM 775 CD GLU 101 17.966 105.157 17.232 1.00 30.00 C ATOM 776 OE1 GLU 101 17.664 104.052 16.707 1.00 30.00 O ATOM 777 OE2 GLU 101 18.561 105.281 18.332 1.00 30.00 O ATOM 778 N CYS 102 15.344 105.533 12.603 1.00 30.00 N ATOM 779 CA CYS 102 14.721 105.628 11.301 1.00 30.00 C ATOM 780 C CYS 102 14.507 104.215 10.869 1.00 30.00 C ATOM 781 O CYS 102 13.423 103.688 11.044 1.00 30.00 O ATOM 782 CB CYS 102 15.587 106.421 10.282 1.00 30.00 C ATOM 783 SG CYS 102 15.529 108.208 10.630 1.00 30.00 S ATOM 784 N THR 103 15.570 103.544 10.384 1.00 30.00 N ATOM 785 CA THR 103 15.769 102.126 10.617 1.00 30.00 C ATOM 786 C THR 103 17.052 102.210 11.385 1.00 30.00 C ATOM 787 O THR 103 17.800 103.178 11.220 1.00 30.00 O ATOM 788 CB THR 103 15.872 101.275 9.362 1.00 30.00 C ATOM 789 OG1 THR 103 16.082 99.911 9.702 1.00 30.00 O ATOM 790 CG2 THR 103 16.984 101.744 8.407 1.00 30.00 C ATOM 791 N LYS 104 17.317 101.260 12.296 1.00 30.00 N ATOM 792 CA LYS 104 18.503 101.344 13.117 1.00 30.00 C ATOM 793 C LYS 104 19.723 100.909 12.312 1.00 30.00 C ATOM 794 O LYS 104 20.738 101.603 12.277 1.00 30.00 O ATOM 795 CB LYS 104 18.326 100.489 14.398 1.00 30.00 C ATOM 796 CG LYS 104 19.562 100.347 15.306 1.00 30.00 C ATOM 797 CD LYS 104 20.004 101.664 15.963 1.00 30.00 C ATOM 798 CE LYS 104 21.261 101.543 16.829 1.00 30.00 C ATOM 799 NZ LYS 104 22.442 101.293 15.977 1.00 30.00 N ATOM 800 N ASP 105 19.627 99.752 11.614 1.00 30.00 N ATOM 801 CA ASP 105 20.590 99.342 10.614 1.00 30.00 C ATOM 802 C ASP 105 19.750 98.952 9.403 1.00 30.00 C ATOM 803 O ASP 105 19.539 99.755 8.495 1.00 30.00 O ATOM 804 CB ASP 105 21.492 98.195 11.153 1.00 30.00 C ATOM 805 CG ASP 105 22.507 98.770 12.139 1.00 30.00 C ATOM 806 OD1 ASP 105 23.550 99.285 11.656 1.00 30.00 O ATOM 807 OD2 ASP 105 22.262 98.693 13.372 1.00 30.00 O ATOM 808 N ARG 106 19.212 97.720 9.418 1.00 30.00 N ATOM 809 CA ARG 106 18.103 97.217 8.632 1.00 30.00 C ATOM 810 C ARG 106 17.647 96.182 9.637 1.00 30.00 C ATOM 811 O ARG 106 18.422 95.901 10.562 1.00 30.00 O ATOM 812 CB ARG 106 18.494 96.457 7.331 1.00 30.00 C ATOM 813 CG ARG 106 19.040 97.315 6.174 1.00 30.00 C ATOM 814 CD ARG 106 20.572 97.422 6.162 1.00 30.00 C ATOM 815 NE ARG 106 21.007 98.175 4.938 1.00 30.00 N ATOM 816 CZ ARG 106 21.058 99.540 4.873 1.00 30.00 C ATOM 817 NH1 ARG 106 20.672 100.308 5.931 1.00 30.00 H ATOM 818 NH2 ARG 106 21.505 100.131 3.727 1.00 30.00 H ATOM 819 N CYS 107 16.435 95.590 9.514 1.00 30.00 N ATOM 820 CA CYS 107 15.858 94.859 10.630 1.00 30.00 C ATOM 821 C CYS 107 16.652 93.714 11.213 1.00 30.00 C ATOM 822 O CYS 107 16.567 93.458 12.411 1.00 30.00 O ATOM 823 CB CYS 107 14.435 94.314 10.312 1.00 30.00 C ATOM 824 SG CYS 107 13.171 95.630 10.239 1.00 30.00 S ATOM 825 N GLY 108 17.465 93.011 10.402 1.00 30.00 N ATOM 826 CA GLY 108 18.202 91.869 10.908 1.00 30.00 C ATOM 827 C GLY 108 19.506 92.149 11.586 1.00 30.00 C ATOM 828 O GLY 108 20.150 91.217 12.062 1.00 30.00 O ATOM 829 N GLU 109 19.948 93.426 11.631 1.00 30.00 N ATOM 830 CA GLU 109 21.244 93.767 12.198 1.00 30.00 C ATOM 831 C GLU 109 21.127 94.803 13.276 1.00 30.00 C ATOM 832 O GLU 109 22.083 95.517 13.573 1.00 30.00 O ATOM 833 CB GLU 109 22.209 94.288 11.099 1.00 30.00 C ATOM 834 CG GLU 109 22.503 93.239 9.997 1.00 30.00 C ATOM 835 CD GLU 109 23.505 93.751 8.962 1.00 30.00 C ATOM 836 OE1 GLU 109 24.590 93.127 8.838 1.00 30.00 O ATOM 837 OE2 GLU 109 23.184 94.761 8.284 1.00 30.00 O ATOM 838 N VAL 110 19.942 94.889 13.901 1.00 30.00 N ATOM 839 CA VAL 110 19.704 95.761 15.028 1.00 30.00 C ATOM 840 C VAL 110 19.966 94.981 16.291 1.00 30.00 C ATOM 841 O VAL 110 20.106 93.754 16.265 1.00 30.00 O ATOM 842 CB VAL 110 18.284 96.335 14.999 1.00 30.00 C ATOM 843 CG1 VAL 110 18.035 96.911 13.593 1.00 30.00 C ATOM 844 CG2 VAL 110 17.205 95.278 15.332 1.00 30.00 C ATOM 845 N ARG 111 20.027 95.682 17.449 1.00 30.00 N ATOM 846 CA ARG 111 20.180 95.034 18.735 1.00 30.00 C ATOM 847 C ARG 111 18.972 94.189 19.057 1.00 30.00 C ATOM 848 O ARG 111 17.854 94.690 19.215 1.00 30.00 O ATOM 849 CB ARG 111 20.411 96.050 19.878 1.00 30.00 C ATOM 850 CG ARG 111 21.700 96.896 19.766 1.00 30.00 C ATOM 851 CD ARG 111 23.015 96.105 19.925 1.00 30.00 C ATOM 852 NE ARG 111 23.414 95.514 18.603 1.00 30.00 N ATOM 853 CZ ARG 111 24.456 94.638 18.470 1.00 30.00 C ATOM 854 NH1 ARG 111 25.178 94.254 19.562 1.00 30.00 H ATOM 855 NH2 ARG 111 24.766 94.157 17.232 1.00 30.00 H ATOM 856 N ASN 112 19.187 92.854 19.114 1.00 30.00 N ATOM 857 CA ASN 112 18.117 91.897 19.230 1.00 30.00 C ATOM 858 C ASN 112 17.583 91.852 20.645 1.00 30.00 C ATOM 859 O ASN 112 18.000 91.048 21.478 1.00 30.00 O ATOM 860 CB ASN 112 18.545 90.468 18.783 1.00 30.00 C ATOM 861 CG ASN 112 18.145 90.172 17.334 1.00 30.00 C ATOM 862 OD1 ASN 112 17.406 89.209 17.095 1.00 30.00 O ATOM 863 ND2 ASN 112 18.626 90.988 16.361 1.00 30.00 N ATOM 864 N GLU 113 16.614 92.754 20.912 1.00 30.00 N ATOM 865 CA GLU 113 15.861 92.793 22.136 1.00 30.00 C ATOM 866 C GLU 113 14.686 91.823 22.028 1.00 30.00 C ATOM 867 O GLU 113 14.635 90.823 22.743 1.00 30.00 O ATOM 868 CB GLU 113 15.355 94.227 22.454 1.00 30.00 C ATOM 869 CG GLU 113 16.503 95.260 22.614 1.00 30.00 C ATOM 870 CD GLU 113 16.033 96.646 23.070 1.00 30.00 C ATOM 871 OE1 GLU 113 16.884 97.574 23.034 1.00 30.00 O ATOM 872 OE2 GLU 113 14.846 96.791 23.459 1.00 30.00 O ATOM 873 N GLU 114 13.727 92.062 21.090 1.00 30.00 N ATOM 874 CA GLU 114 12.815 91.015 20.648 1.00 30.00 C ATOM 875 C GLU 114 13.560 90.214 19.594 1.00 30.00 C ATOM 876 O GLU 114 14.311 90.771 18.791 1.00 30.00 O ATOM 877 CB GLU 114 11.479 91.589 20.116 1.00 30.00 C ATOM 878 CG GLU 114 10.389 90.528 19.826 1.00 30.00 C ATOM 879 CD GLU 114 10.055 89.668 21.045 1.00 30.00 C ATOM 880 OE1 GLU 114 10.533 88.501 21.068 1.00 30.00 O ATOM 881 OE2 GLU 114 9.351 90.168 21.959 1.00 30.00 O ATOM 882 N ASN 115 13.426 88.866 19.620 1.00 30.00 N ATOM 883 CA ASN 115 14.248 87.994 18.800 1.00 30.00 C ATOM 884 C ASN 115 13.774 88.010 17.363 1.00 30.00 C ATOM 885 O ASN 115 12.582 87.879 17.072 1.00 30.00 O ATOM 886 CB ASN 115 14.232 86.554 19.391 1.00 30.00 C ATOM 887 CG ASN 115 15.229 85.605 18.716 1.00 30.00 C ATOM 888 OD1 ASN 115 14.834 84.614 18.101 1.00 30.00 O ATOM 889 ND2 ASN 115 16.547 85.908 18.840 1.00 30.00 N ATOM 890 N ALA 116 14.733 88.206 16.436 1.00 30.00 N ATOM 891 CA ALA 116 14.457 88.275 15.031 1.00 30.00 C ATOM 892 C ALA 116 14.640 86.933 14.343 1.00 30.00 C ATOM 893 O ALA 116 15.730 86.357 14.369 1.00 30.00 O ATOM 894 CB ALA 116 15.408 89.292 14.373 1.00 30.00 C ATOM 895 N CYS 117 13.574 86.408 13.685 1.00 30.00 N ATOM 896 CA CYS 117 13.685 85.203 12.887 1.00 30.00 C ATOM 897 C CYS 117 13.648 85.559 11.418 1.00 30.00 C ATOM 898 O CYS 117 12.735 86.244 10.945 1.00 30.00 O ATOM 899 CB CYS 117 12.561 84.179 13.191 1.00 30.00 C ATOM 900 SG CYS 117 12.362 83.843 14.974 1.00 30.00 S ATOM 901 N HIS 118 14.666 85.081 10.669 1.00 30.00 N ATOM 902 CA HIS 118 14.815 85.366 9.260 1.00 30.00 C ATOM 903 C HIS 118 14.658 84.114 8.449 1.00 30.00 C ATOM 904 O HIS 118 14.957 83.005 8.888 1.00 30.00 O ATOM 905 CB HIS 118 16.186 86.000 8.930 1.00 30.00 C ATOM 906 CG HIS 118 16.430 87.242 9.729 1.00 30.00 C ATOM 907 ND1 HIS 118 15.769 88.439 9.547 1.00 30.00 N ATOM 908 CD2 HIS 118 17.220 87.416 10.821 1.00 30.00 C ATOM 909 CE1 HIS 118 16.184 89.263 10.538 1.00 30.00 C ATOM 910 NE2 HIS 118 17.066 88.688 11.332 1.00 30.00 N ATOM 911 N CYS 119 14.190 84.314 7.206 1.00 30.00 N ATOM 912 CA CYS 119 14.185 83.332 6.153 1.00 30.00 C ATOM 913 C CYS 119 15.138 83.921 5.152 1.00 30.00 C ATOM 914 O CYS 119 15.171 85.137 4.953 1.00 30.00 O ATOM 915 CB CYS 119 12.764 83.202 5.544 1.00 30.00 C ATOM 916 SG CYS 119 12.610 82.022 4.168 1.00 30.00 S ATOM 917 N SER 120 15.937 83.054 4.514 1.00 30.00 N ATOM 918 CA SER 120 16.776 83.415 3.400 1.00 30.00 C ATOM 919 C SER 120 16.582 82.282 2.445 1.00 30.00 C ATOM 920 O SER 120 15.602 81.533 2.523 1.00 30.00 O ATOM 921 CB SER 120 18.259 83.602 3.854 1.00 30.00 C ATOM 922 OG SER 120 19.101 84.089 2.807 1.00 30.00 O ATOM 923 N GLU 121 17.531 82.122 1.518 1.00 30.00 N ATOM 924 CA GLU 121 17.407 81.206 0.428 1.00 30.00 C ATOM 925 C GLU 121 17.365 79.755 0.835 1.00 30.00 C ATOM 926 O GLU 121 16.592 78.958 0.299 1.00 30.00 O ATOM 927 CB GLU 121 18.549 81.408 -0.599 1.00 30.00 C ATOM 928 CG GLU 121 18.527 82.805 -1.272 1.00 30.00 C ATOM 929 CD GLU 121 19.674 82.976 -2.270 1.00 30.00 C ATOM 930 OE1 GLU 121 19.381 83.144 -3.481 1.00 30.00 O ATOM 931 OE2 GLU 121 20.849 82.946 -1.819 1.00 30.00 O ATOM 932 N ASP 122 18.196 79.400 1.837 1.00 30.00 N ATOM 933 CA ASP 122 18.297 78.057 2.341 1.00 30.00 C ATOM 934 C ASP 122 16.992 77.567 2.934 1.00 30.00 C ATOM 935 O ASP 122 16.520 76.476 2.623 1.00 30.00 O ATOM 936 CB ASP 122 19.467 77.991 3.367 1.00 30.00 C ATOM 937 CG ASP 122 19.916 76.563 3.684 1.00 30.00 C ATOM 938 OD1 ASP 122 20.299 75.848 2.724 1.00 30.00 O ATOM 939 OD2 ASP 122 19.919 76.206 4.891 1.00 30.00 O ATOM 940 N CYS 123 16.366 78.425 3.762 1.00 30.00 N ATOM 941 CA CYS 123 15.093 78.177 4.391 1.00 30.00 C ATOM 942 C CYS 123 13.991 77.896 3.411 1.00 30.00 C ATOM 943 O CYS 123 13.263 76.913 3.564 1.00 30.00 O ATOM 944 CB CYS 123 14.691 79.384 5.264 1.00 30.00 C ATOM 945 SG CYS 123 15.808 79.647 6.676 1.00 30.00 S ATOM 946 N LEU 124 13.875 78.743 2.354 1.00 30.00 N ATOM 947 CA LEU 124 12.819 78.585 1.378 1.00 30.00 C ATOM 948 C LEU 124 12.968 77.339 0.532 1.00 30.00 C ATOM 949 O LEU 124 11.982 76.698 0.173 1.00 30.00 O ATOM 950 CB LEU 124 12.650 79.861 0.513 1.00 30.00 C ATOM 951 CG LEU 124 11.173 80.237 0.184 1.00 30.00 C ATOM 952 CD1 LEU 124 10.324 80.506 1.441 1.00 30.00 C ATOM 953 CD2 LEU 124 10.459 79.255 -0.759 1.00 30.00 C ATOM 954 N SER 125 14.219 76.922 0.250 1.00 30.00 N ATOM 955 CA SER 125 14.482 75.653 -0.399 1.00 30.00 C ATOM 956 C SER 125 14.108 74.451 0.448 1.00 30.00 C ATOM 957 O SER 125 13.430 73.535 -0.015 1.00 30.00 O ATOM 958 CB SER 125 15.980 75.564 -0.802 1.00 30.00 C ATOM 959 OG SER 125 16.236 74.474 -1.684 1.00 30.00 O ATOM 960 N ARG 126 14.550 74.436 1.726 1.00 30.00 N ATOM 961 CA ARG 126 14.357 73.304 2.610 1.00 30.00 C ATOM 962 C ARG 126 12.939 73.151 3.115 1.00 30.00 C ATOM 963 O ARG 126 12.381 72.056 3.070 1.00 30.00 O ATOM 964 CB ARG 126 15.322 73.401 3.819 1.00 30.00 C ATOM 965 CG ARG 126 16.800 73.207 3.437 1.00 30.00 C ATOM 966 CD ARG 126 17.775 73.700 4.515 1.00 30.00 C ATOM 967 NE ARG 126 17.607 72.896 5.766 1.00 30.00 N ATOM 968 CZ ARG 126 18.355 73.148 6.882 1.00 30.00 C ATOM 969 NH1 ARG 126 18.175 72.375 7.991 1.00 30.00 H ATOM 970 NH2 ARG 126 19.274 74.157 6.884 1.00 30.00 H ATOM 971 N GLY 127 12.329 74.232 3.649 1.00 30.00 N ATOM 972 CA GLY 127 11.024 74.118 4.280 1.00 30.00 C ATOM 973 C GLY 127 11.006 74.922 5.550 1.00 30.00 C ATOM 974 O GLY 127 10.046 75.627 5.859 1.00 30.00 O ATOM 975 N ASP 128 12.100 74.821 6.337 1.00 30.00 N ATOM 976 CA ASP 128 12.201 75.402 7.659 1.00 30.00 C ATOM 977 C ASP 128 12.535 76.873 7.640 1.00 30.00 C ATOM 978 O ASP 128 13.699 77.272 7.673 1.00 30.00 O ATOM 979 CB ASP 128 13.268 74.658 8.505 1.00 30.00 C ATOM 980 CG ASP 128 12.882 73.197 8.684 1.00 30.00 C ATOM 981 OD1 ASP 128 13.604 72.330 8.127 1.00 30.00 O ATOM 982 OD2 ASP 128 11.867 72.939 9.381 1.00 30.00 O ATOM 983 N CYS 129 11.474 77.697 7.610 1.00 30.00 N ATOM 984 CA CYS 129 11.555 79.136 7.582 1.00 30.00 C ATOM 985 C CYS 129 11.122 79.703 8.913 1.00 30.00 C ATOM 986 O CYS 129 10.944 78.984 9.897 1.00 30.00 O ATOM 987 CB CYS 129 10.627 79.704 6.465 1.00 30.00 C ATOM 988 SG CYS 129 10.793 78.873 4.854 1.00 30.00 S ATOM 989 N CYS 130 10.898 81.033 8.944 1.00 30.00 N ATOM 990 CA CYS 130 10.162 81.665 10.000 1.00 30.00 C ATOM 991 C CYS 130 8.679 81.660 9.673 1.00 30.00 C ATOM 992 O CYS 130 8.270 81.738 8.511 1.00 30.00 O ATOM 993 CB CYS 130 10.688 83.104 10.247 1.00 30.00 C ATOM 994 SG CYS 130 10.771 84.165 8.761 1.00 30.00 S ATOM 995 N THR 131 7.852 81.511 10.733 1.00 30.00 N ATOM 996 CA THR 131 6.491 80.997 10.754 1.00 30.00 C ATOM 997 C THR 131 5.614 81.156 9.544 1.00 30.00 C ATOM 998 O THR 131 5.259 80.174 8.891 1.00 30.00 O ATOM 999 CB THR 131 5.748 81.499 11.989 1.00 30.00 C ATOM 1000 OG1 THR 131 6.584 81.400 13.136 1.00 30.00 O ATOM 1001 CG2 THR 131 4.475 80.679 12.269 1.00 30.00 C ATOM 1002 N ASN 132 5.230 82.405 9.220 1.00 30.00 N ATOM 1003 CA ASN 132 4.242 82.706 8.217 1.00 30.00 C ATOM 1004 C ASN 132 4.600 82.291 6.818 1.00 30.00 C ATOM 1005 O ASN 132 3.712 82.103 5.995 1.00 30.00 O ATOM 1006 CB ASN 132 3.934 84.228 8.162 1.00 30.00 C ATOM 1007 CG ASN 132 3.498 84.818 9.509 1.00 30.00 C ATOM 1008 OD1 ASN 132 4.193 84.693 10.522 1.00 30.00 O ATOM 1009 ND2 ASN 132 2.334 85.520 9.505 1.00 30.00 N ATOM 1010 N TYR 133 5.903 82.129 6.508 1.00 30.00 N ATOM 1011 CA TYR 133 6.372 81.880 5.162 1.00 30.00 C ATOM 1012 C TYR 133 5.878 80.572 4.594 1.00 30.00 C ATOM 1013 O TYR 133 5.631 80.461 3.394 1.00 30.00 O ATOM 1014 CB TYR 133 7.925 81.887 5.111 1.00 30.00 C ATOM 1015 CG TYR 133 8.497 83.281 4.992 1.00 30.00 C ATOM 1016 CD1 TYR 133 9.325 83.573 3.897 1.00 30.00 C ATOM 1017 CD2 TYR 133 8.226 84.306 5.920 1.00 30.00 C ATOM 1018 CE1 TYR 133 9.819 84.864 3.689 1.00 30.00 C ATOM 1019 CE2 TYR 133 8.707 85.607 5.707 1.00 30.00 C ATOM 1020 CZ TYR 133 9.484 85.887 4.578 1.00 30.00 C ATOM 1021 OH TYR 133 9.883 87.204 4.292 1.00 30.00 H ATOM 1022 N GLN 134 5.700 79.552 5.456 1.00 30.00 N ATOM 1023 CA GLN 134 5.190 78.277 5.008 1.00 30.00 C ATOM 1024 C GLN 134 3.679 78.202 4.941 1.00 30.00 C ATOM 1025 O GLN 134 3.132 77.290 4.324 1.00 30.00 O ATOM 1026 CB GLN 134 5.739 77.118 5.884 1.00 30.00 C ATOM 1027 CG GLN 134 5.350 77.160 7.379 1.00 30.00 C ATOM 1028 CD GLN 134 5.894 75.927 8.109 1.00 30.00 C ATOM 1029 OE1 GLN 134 5.473 74.796 7.857 1.00 30.00 O ATOM 1030 NE2 GLN 134 6.853 76.144 9.048 1.00 30.00 N ATOM 1031 N VAL 135 2.972 79.171 5.563 1.00 30.00 N ATOM 1032 CA VAL 135 1.524 79.209 5.592 1.00 30.00 C ATOM 1033 C VAL 135 1.058 80.551 5.080 1.00 30.00 C ATOM 1034 O VAL 135 0.162 81.208 5.617 1.00 30.00 O ATOM 1035 CB VAL 135 1.019 78.833 6.995 1.00 30.00 C ATOM 1036 CG1 VAL 135 1.499 79.816 8.087 1.00 30.00 C ATOM 1037 CG2 VAL 135 -0.508 78.600 7.017 1.00 30.00 C ATOM 1038 N VAL 136 1.665 80.965 3.947 1.00 30.00 N ATOM 1039 CA VAL 136 1.206 82.092 3.180 1.00 30.00 C ATOM 1040 C VAL 136 0.457 81.542 1.998 1.00 30.00 C ATOM 1041 O VAL 136 0.872 80.578 1.348 1.00 30.00 O ATOM 1042 CB VAL 136 2.338 83.044 2.781 1.00 30.00 C ATOM 1043 CG1 VAL 136 3.280 82.464 1.706 1.00 30.00 C ATOM 1044 CG2 VAL 136 1.767 84.412 2.354 1.00 30.00 C ATOM 1045 N CYS 137 -0.726 82.127 1.743 1.00 30.00 N ATOM 1046 CA CYS 137 -1.571 81.757 0.642 1.00 30.00 C ATOM 1047 C CYS 137 -1.307 82.700 -0.504 1.00 30.00 C ATOM 1048 O CYS 137 -0.238 83.307 -0.604 1.00 30.00 O ATOM 1049 CB CYS 137 -3.057 81.764 1.121 1.00 30.00 C ATOM 1050 SG CYS 137 -3.604 83.363 1.828 1.00 30.00 S ATOM 1051 N LYS 138 -2.293 82.841 -1.408 1.00 30.00 N ATOM 1052 CA LYS 138 -2.217 83.798 -2.465 1.00 30.00 C ATOM 1053 C LYS 138 -2.835 85.108 -2.034 1.00 30.00 C ATOM 1054 O LYS 138 -3.912 85.162 -1.434 1.00 30.00 O ATOM 1055 CB LYS 138 -2.894 83.269 -3.760 1.00 30.00 C ATOM 1056 CG LYS 138 -4.364 82.829 -3.631 1.00 30.00 C ATOM 1057 CD LYS 138 -4.996 82.428 -4.981 1.00 30.00 C ATOM 1058 CE LYS 138 -4.423 81.168 -5.640 1.00 30.00 C ATOM 1059 NZ LYS 138 -4.720 79.973 -4.824 1.00 30.00 N ATOM 1060 N GLY 139 -2.116 86.208 -2.330 1.00 30.00 N ATOM 1061 CA GLY 139 -2.589 87.538 -2.046 1.00 30.00 C ATOM 1062 C GLY 139 -1.897 88.509 -2.938 1.00 30.00 C ATOM 1063 O GLY 139 -2.313 88.743 -4.071 1.00 30.00 O ATOM 1064 N GLU 140 -0.795 89.094 -2.434 1.00 30.00 N ATOM 1065 CA GLU 140 0.103 89.891 -3.235 1.00 30.00 C ATOM 1066 C GLU 140 1.472 89.355 -2.978 1.00 30.00 C ATOM 1067 O GLU 140 1.825 89.060 -1.834 1.00 30.00 O ATOM 1068 CB GLU 140 0.062 91.400 -2.885 1.00 30.00 C ATOM 1069 CG GLU 140 -1.282 92.075 -3.255 1.00 30.00 C ATOM 1070 CD GLU 140 -1.290 93.563 -2.905 1.00 30.00 C ATOM 1071 OE1 GLU 140 -1.154 93.880 -1.695 1.00 30.00 O ATOM 1072 OE2 GLU 140 -1.437 94.387 -3.845 1.00 30.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 76.99 40.9 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 81.97 35.5 62 100.0 62 ARMSMC BURIED . . . . . . . . 63.54 53.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 97.22 25.6 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 96.38 27.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 91.96 26.9 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 106.96 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.47 30.4 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 86.60 33.3 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 88.83 31.2 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 97.24 28.6 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.74 38.5 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 91.00 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 75.68 50.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 119.44 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.38 16.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 96.38 16.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 101.72 25.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 84.69 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.99 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.99 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.1998 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 9.68 32 100.0 32 CRMSCA BURIED . . . . . . . . 7.01 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.09 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 9.77 156 100.0 156 CRMSMC BURIED . . . . . . . . 7.19 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.02 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 11.36 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 11.94 112 100.0 112 CRMSSC BURIED . . . . . . . . 8.74 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.00 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 10.77 240 100.0 240 CRMSALL BURIED . . . . . . . . 7.95 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 21.618 0.574 0.648 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 20.835 0.541 0.624 32 100.0 32 ERRCA BURIED . . . . . . . . 23.545 0.654 0.709 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 21.555 0.572 0.648 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 20.804 0.541 0.625 156 100.0 156 ERRMC BURIED . . . . . . . . 23.358 0.646 0.701 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 19.888 0.513 0.591 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 19.542 0.501 0.580 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 18.807 0.471 0.555 112 100.0 112 ERRSC BURIED . . . . . . . . 22.173 0.602 0.669 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 20.806 0.546 0.623 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 19.932 0.511 0.595 240 100.0 240 ERRALL BURIED . . . . . . . . 22.803 0.625 0.686 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 6 32 45 45 DISTCA CA (P) 0.00 0.00 0.00 13.33 71.11 45 DISTCA CA (RMS) 0.00 0.00 0.00 4.18 6.87 DISTCA ALL (N) 0 0 6 43 210 345 345 DISTALL ALL (P) 0.00 0.00 1.74 12.46 60.87 345 DISTALL ALL (RMS) 0.00 0.00 2.63 3.99 6.83 DISTALL END of the results output