####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 345), selected 45 , name T0543TS220_1-D2 # Molecule2: number of CA atoms 45 ( 345), selected 45 , name T0543-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS220_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 101 - 115 4.97 13.42 LONGEST_CONTINUOUS_SEGMENT: 15 107 - 121 4.82 20.63 LONGEST_CONTINUOUS_SEGMENT: 15 108 - 122 4.94 20.93 LCS_AVERAGE: 31.36 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 114 - 120 1.47 22.39 LONGEST_CONTINUOUS_SEGMENT: 7 125 - 131 1.66 23.11 LONGEST_CONTINUOUS_SEGMENT: 7 126 - 132 1.65 23.31 LCS_AVERAGE: 12.59 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 126 - 131 0.68 22.58 LCS_AVERAGE: 8.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 96 T 96 3 5 14 0 3 4 5 6 8 8 10 12 14 15 16 17 18 20 20 21 22 23 23 LCS_GDT A 97 A 97 3 5 14 1 3 4 5 5 6 8 10 12 13 15 16 17 18 20 20 21 22 23 23 LCS_GDT R 98 R 98 3 5 14 3 3 4 5 5 6 8 10 12 14 15 16 17 18 20 20 21 22 23 23 LCS_GDT G 99 G 99 3 5 14 3 3 4 5 7 8 8 10 12 14 15 16 17 18 20 20 21 22 23 27 LCS_GDT W 100 W 100 3 5 14 3 3 4 5 5 8 8 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT E 101 E 101 3 5 15 3 3 4 5 7 8 8 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT C 102 C 102 3 5 15 3 3 4 4 7 8 8 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT T 103 T 103 3 5 15 0 3 4 4 7 8 8 10 12 14 15 16 17 18 20 20 21 22 26 27 LCS_GDT K 104 K 104 3 5 15 0 3 3 3 5 6 8 10 12 14 15 16 17 18 20 20 21 23 26 27 LCS_GDT D 105 D 105 3 5 15 3 3 3 5 7 8 8 10 12 14 15 16 17 18 20 20 21 22 25 27 LCS_GDT R 106 R 106 3 5 15 3 3 4 5 7 8 8 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT C 107 C 107 3 5 15 3 3 3 4 5 6 7 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT G 108 G 108 4 5 15 4 4 4 4 5 6 7 10 12 14 15 16 17 18 20 20 22 23 26 27 LCS_GDT E 109 E 109 4 5 15 4 4 4 4 5 6 8 9 11 11 13 14 16 18 20 20 22 23 26 27 LCS_GDT V 110 V 110 4 5 15 4 4 4 4 5 6 8 9 11 11 12 14 16 18 19 20 22 23 26 27 LCS_GDT R 111 R 111 4 5 15 4 4 4 4 5 6 8 9 11 11 12 13 15 16 19 19 22 23 26 27 LCS_GDT N 112 N 112 3 5 15 3 3 3 4 5 6 7 9 10 11 12 13 15 16 18 20 22 23 26 27 LCS_GDT E 113 E 113 3 4 15 3 3 3 4 5 6 8 9 11 11 12 13 15 16 18 20 22 23 26 27 LCS_GDT E 114 E 114 4 7 15 4 4 5 6 7 8 8 9 10 11 12 13 15 16 18 20 22 23 26 27 LCS_GDT N 115 N 115 4 7 15 4 4 5 6 7 8 8 9 10 11 12 13 15 16 18 20 22 23 26 27 LCS_GDT A 116 A 116 4 7 15 4 4 4 6 7 8 8 9 10 10 12 13 14 16 17 19 20 21 23 24 LCS_GDT C 117 C 117 4 7 15 4 4 4 5 7 8 8 9 10 10 12 13 14 15 16 19 20 20 22 22 LCS_GDT H 118 H 118 3 7 15 3 3 5 6 7 8 8 9 10 11 12 13 14 18 19 20 22 23 26 27 LCS_GDT C 119 C 119 3 7 15 3 3 5 6 7 8 8 9 10 11 12 12 14 18 19 20 22 23 26 27 LCS_GDT S 120 S 120 3 7 15 3 3 5 6 7 8 8 9 10 11 12 13 14 18 19 20 22 23 26 27 LCS_GDT E 121 E 121 3 5 15 3 3 4 6 6 8 8 9 10 11 12 13 15 16 18 20 22 23 26 27 LCS_GDT D 122 D 122 3 5 15 3 3 4 5 6 7 8 9 10 11 12 14 15 16 18 20 21 23 26 27 LCS_GDT C 123 C 123 4 5 14 3 4 4 5 6 6 8 9 10 11 12 14 15 16 18 20 22 23 26 27 LCS_GDT L 124 L 124 4 5 14 3 4 4 5 6 6 8 9 10 11 12 14 15 16 18 20 22 23 26 27 LCS_GDT S 125 S 125 4 7 14 3 4 4 5 5 7 8 9 10 11 12 14 15 16 18 20 22 23 26 27 LCS_GDT R 126 R 126 6 7 14 4 6 6 6 7 7 8 9 9 11 12 13 15 15 18 20 22 23 26 27 LCS_GDT G 127 G 127 6 7 14 4 6 6 6 7 7 8 9 9 10 11 13 15 15 17 20 22 23 26 27 LCS_GDT D 128 D 128 6 7 13 4 6 6 6 7 7 8 9 9 9 11 14 15 16 17 17 17 22 26 27 LCS_GDT C 129 C 129 6 7 13 4 6 6 6 7 7 8 9 9 10 12 14 15 16 16 16 17 20 21 24 LCS_GDT C 130 C 130 6 7 13 3 6 6 6 7 7 8 9 9 10 12 14 15 16 16 16 17 19 20 21 LCS_GDT T 131 T 131 6 7 13 3 6 6 6 7 7 8 9 9 10 12 14 15 16 16 16 17 19 20 24 LCS_GDT N 132 N 132 4 7 13 3 4 4 4 7 7 8 9 9 10 12 14 15 16 16 16 17 19 20 21 LCS_GDT Y 133 Y 133 4 6 13 3 3 4 4 5 6 8 9 9 10 10 13 14 16 16 16 17 19 20 21 LCS_GDT Q 134 Q 134 4 6 13 3 3 4 4 5 6 7 9 9 10 12 14 15 16 16 18 18 20 22 25 LCS_GDT V 135 V 135 3 5 13 3 3 4 5 6 6 6 8 9 10 12 14 15 18 20 20 21 22 23 25 LCS_GDT V 136 V 136 4 5 13 3 4 4 5 6 6 6 7 8 10 12 14 16 18 20 20 21 22 23 25 LCS_GDT C 137 C 137 4 5 12 3 4 4 4 6 6 7 9 11 12 14 16 17 18 20 20 21 22 23 25 LCS_GDT K 138 K 138 4 5 12 3 4 4 4 7 8 8 9 11 14 15 16 17 18 20 20 21 22 23 25 LCS_GDT G 139 G 139 4 5 12 3 4 4 4 4 5 6 9 11 14 15 16 17 18 20 20 21 22 23 25 LCS_GDT E 140 E 140 3 4 12 3 3 3 4 4 5 7 8 9 10 10 11 17 18 20 20 21 22 23 25 LCS_AVERAGE LCS_A: 17.47 ( 8.44 12.59 31.36 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 6 7 8 8 10 12 14 15 16 17 18 20 20 22 23 26 27 GDT PERCENT_AT 8.89 13.33 13.33 13.33 15.56 17.78 17.78 22.22 26.67 31.11 33.33 35.56 37.78 40.00 44.44 44.44 48.89 51.11 57.78 60.00 GDT RMS_LOCAL 0.33 0.68 0.68 0.68 1.47 1.99 1.99 2.79 3.25 3.70 3.86 4.08 4.39 4.64 8.74 5.10 6.55 6.68 7.14 7.28 GDT RMS_ALL_AT 27.29 22.58 22.58 22.58 22.39 16.34 16.34 16.61 16.69 15.22 15.39 15.06 14.78 14.67 14.04 14.19 14.49 14.31 13.95 13.80 # Checking swapping # possible swapping detected: E 101 E 101 # possible swapping detected: E 109 E 109 # possible swapping detected: E 114 E 114 # possible swapping detected: E 121 E 121 # possible swapping detected: D 122 D 122 # possible swapping detected: Y 133 Y 133 # possible swapping detected: E 140 E 140 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 96 T 96 1.722 0 0.672 1.429 4.601 66.548 61.088 LGA A 97 A 97 7.033 0 0.575 0.552 9.095 15.476 12.667 LGA R 98 R 98 6.210 0 0.641 0.721 14.294 24.405 9.913 LGA G 99 G 99 0.977 0 0.170 0.170 4.080 64.405 64.405 LGA W 100 W 100 3.220 0 0.692 0.951 13.447 59.405 21.905 LGA E 101 E 101 0.609 0 0.028 0.617 6.135 70.000 51.058 LGA C 102 C 102 3.082 0 0.646 1.106 7.445 65.119 50.317 LGA T 103 T 103 3.303 0 0.603 0.528 4.518 43.690 43.537 LGA K 104 K 104 4.707 0 0.614 1.392 14.876 35.833 17.090 LGA D 105 D 105 3.540 0 0.650 0.931 7.671 55.595 36.429 LGA R 106 R 106 2.234 0 0.694 1.384 6.951 64.881 43.723 LGA C 107 C 107 3.574 0 0.225 0.794 8.747 51.905 38.651 LGA G 108 G 108 3.548 0 0.425 0.425 4.443 40.238 40.238 LGA E 109 E 109 8.819 0 0.016 0.722 16.934 4.524 2.011 LGA V 110 V 110 13.345 0 0.040 0.069 17.102 0.000 0.000 LGA R 111 R 111 17.236 0 0.215 0.625 19.581 0.000 0.000 LGA N 112 N 112 21.695 0 0.592 1.098 28.094 0.000 0.000 LGA E 113 E 113 20.889 0 0.157 0.377 21.361 0.000 0.000 LGA E 114 E 114 21.451 0 0.707 1.043 23.031 0.000 0.000 LGA N 115 N 115 17.952 0 0.049 1.099 19.545 0.000 0.000 LGA A 116 A 116 17.584 0 0.287 0.341 19.322 0.000 0.000 LGA C 117 C 117 15.320 0 0.548 0.974 18.599 0.000 0.000 LGA H 118 H 118 8.137 0 0.600 1.455 10.978 3.571 12.429 LGA C 119 C 119 8.451 0 0.577 0.890 10.689 8.810 6.111 LGA S 120 S 120 8.743 0 0.082 0.668 12.977 1.905 1.349 LGA E 121 E 121 14.154 0 0.675 1.103 16.258 0.000 0.000 LGA D 122 D 122 19.327 0 0.595 1.044 22.297 0.000 0.000 LGA C 123 C 123 20.483 0 0.629 0.802 22.364 0.000 0.000 LGA L 124 L 124 25.293 0 0.050 1.470 27.936 0.000 0.000 LGA S 125 S 125 30.202 0 0.515 0.669 32.187 0.000 0.000 LGA R 126 R 126 28.102 0 0.523 1.370 28.237 0.000 0.000 LGA G 127 G 127 27.613 0 0.125 0.125 28.035 0.000 0.000 LGA D 128 D 128 27.284 0 0.426 1.272 27.509 0.000 0.000 LGA C 129 C 129 27.412 0 0.143 0.778 30.464 0.000 0.000 LGA C 130 C 130 27.176 0 0.261 0.338 28.649 0.000 0.000 LGA T 131 T 131 26.982 0 0.679 0.980 28.910 0.000 0.000 LGA N 132 N 132 23.833 0 0.275 1.373 25.946 0.000 0.000 LGA Y 133 Y 133 23.575 0 0.603 1.346 33.337 0.000 0.000 LGA Q 134 Q 134 19.281 0 0.654 0.625 21.843 0.000 0.000 LGA V 135 V 135 14.075 0 0.600 0.618 17.016 0.000 0.000 LGA V 136 V 136 9.901 0 0.646 0.630 11.677 0.833 0.544 LGA C 137 C 137 9.259 0 0.174 0.769 9.470 1.786 2.222 LGA K 138 K 138 8.368 0 0.674 1.117 13.235 2.619 1.376 LGA G 139 G 139 7.921 0 0.149 0.149 9.954 4.048 4.048 LGA E 140 E 140 12.632 0 0.110 1.048 17.817 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 345 345 100.00 45 SUMMARY(RMSD_GDC): 11.452 11.408 11.963 15.235 11.580 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 45 4.0 10 2.79 23.333 20.955 0.346 LGA_LOCAL RMSD: 2.792 Number of atoms: 10 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.612 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 11.452 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.363319 * X + -0.782272 * Y + -0.506013 * Z + 94.492401 Y_new = 0.044876 * X + 0.527804 * Y + -0.848180 * Z + 132.524673 Z_new = 0.930583 * X + -0.330868 * Y + -0.156656 * Z + 13.555902 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.018697 -1.196003 -2.012994 [DEG: 172.9586 -68.5259 -115.3361 ] ZXZ: -0.537906 1.728100 1.912406 [DEG: -30.8198 99.0128 109.5728 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS220_1-D2 REMARK 2: T0543-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS220_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 45 4.0 10 2.79 20.955 11.45 REMARK ---------------------------------------------------------- MOLECULE T0543TS220_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT 1pcx_A ATOM 728 N THR 96 17.074 84.103 18.420 1.00200.87 N ATOM 729 CA THR 96 17.317 84.126 19.825 1.00200.87 C ATOM 730 CB THR 96 17.620 85.500 20.342 1.00200.87 C ATOM 731 OG1 THR 96 16.502 86.353 20.146 1.00200.87 O ATOM 732 CG2 THR 96 18.838 86.048 19.579 1.00200.87 C ATOM 733 C THR 96 16.062 83.658 20.476 1.00200.87 C ATOM 734 O THR 96 15.224 83.012 19.849 1.00200.87 O ATOM 735 N ALA 97 15.918 83.951 21.778 1.00 53.54 N ATOM 736 CA ALA 97 14.745 83.526 22.476 1.00 53.54 C ATOM 737 CB ALA 97 14.756 83.952 23.955 1.00 53.54 C ATOM 738 C ALA 97 13.572 84.183 21.828 1.00 53.54 C ATOM 739 O ALA 97 12.543 83.553 21.596 1.00 53.54 O ATOM 740 N ARG 98 13.713 85.479 21.495 1.00246.90 N ATOM 741 CA ARG 98 12.620 86.216 20.935 1.00246.90 C ATOM 742 CB ARG 98 12.787 87.727 21.148 1.00246.90 C ATOM 743 CG ARG 98 12.959 88.066 22.632 1.00246.90 C ATOM 744 CD ARG 98 13.339 89.520 22.911 1.00246.90 C ATOM 745 NE ARG 98 12.084 90.320 22.888 1.00246.90 N ATOM 746 CZ ARG 98 12.039 91.532 23.513 1.00246.90 C ATOM 747 NH1 ARG 98 13.135 92.001 24.178 1.00246.90 N ATOM 748 NH2 ARG 98 10.895 92.274 23.471 1.00246.90 N ATOM 749 C ARG 98 12.547 85.937 19.467 1.00246.90 C ATOM 750 O ARG 98 13.570 85.803 18.796 1.00246.90 O ATOM 751 N GLY 99 11.310 85.835 18.934 1.00138.40 N ATOM 752 CA GLY 99 11.118 85.584 17.534 1.00138.40 C ATOM 753 C GLY 99 9.675 85.839 17.226 1.00138.40 C ATOM 754 O GLY 99 8.819 85.766 18.106 1.00138.40 O ATOM 755 N TRP 100 9.370 86.142 15.947 1.00243.46 N ATOM 756 CA TRP 100 8.016 86.418 15.556 1.00243.46 C ATOM 757 CB TRP 100 7.758 87.901 15.252 1.00243.46 C ATOM 758 CG TRP 100 7.809 88.798 16.462 1.00243.46 C ATOM 759 CD2 TRP 100 7.890 90.229 16.393 1.00243.46 C ATOM 760 CD1 TRP 100 7.794 88.474 17.786 1.00243.46 C ATOM 761 NE1 TRP 100 7.857 89.616 18.549 1.00243.46 N ATOM 762 CE2 TRP 100 7.918 90.703 17.703 1.00243.46 C ATOM 763 CE3 TRP 100 7.941 91.077 15.323 1.00243.46 C ATOM 764 CZ2 TRP 100 7.996 92.042 17.965 1.00243.46 C ATOM 765 CZ3 TRP 100 8.018 92.425 15.591 1.00243.46 C ATOM 766 CH2 TRP 100 8.044 92.898 16.886 1.00243.46 C ATOM 767 C TRP 100 7.751 85.678 14.287 1.00243.46 C ATOM 768 O TRP 100 8.681 85.267 13.595 1.00243.46 O ATOM 769 N GLU 101 6.459 85.470 13.957 1.00246.37 N ATOM 770 CA GLU 101 6.152 84.780 12.740 1.00246.37 C ATOM 771 CB GLU 101 5.605 83.356 12.959 1.00246.37 C ATOM 772 CG GLU 101 5.403 82.569 11.660 1.00246.37 C ATOM 773 CD GLU 101 4.890 81.175 12.008 1.00246.37 C ATOM 774 OE1 GLU 101 5.665 80.396 12.625 1.00246.37 O ATOM 775 OE2 GLU 101 3.719 80.870 11.658 1.00246.37 O ATOM 776 C GLU 101 5.115 85.555 11.989 1.00246.37 C ATOM 777 O GLU 101 4.133 86.031 12.556 1.00246.37 O ATOM 778 N CYS 102 5.352 85.719 10.671 1.00169.01 N ATOM 779 CA CYS 102 4.480 86.366 9.728 1.00169.01 C ATOM 780 CB CYS 102 3.048 85.794 9.760 1.00169.01 C ATOM 781 SG CYS 102 1.916 86.578 8.570 1.00169.01 S ATOM 782 C CYS 102 4.432 87.823 10.051 1.00169.01 C ATOM 783 O CYS 102 3.767 88.607 9.376 1.00169.01 O ATOM 784 N THR 103 5.162 88.231 11.100 1.00123.81 N ATOM 785 CA THR 103 5.184 89.610 11.464 1.00123.81 C ATOM 786 CB THR 103 5.775 89.827 12.823 1.00123.81 C ATOM 787 OG1 THR 103 7.109 89.354 12.859 1.00123.81 O ATOM 788 CG2 THR 103 4.921 89.059 13.846 1.00123.81 C ATOM 789 C THR 103 5.970 90.374 10.446 1.00123.81 C ATOM 790 O THR 103 5.571 91.468 10.045 1.00123.81 O ATOM 791 N LYS 104 7.102 89.806 9.979 1.00126.00 N ATOM 792 CA LYS 104 7.926 90.530 9.051 1.00126.00 C ATOM 793 CB LYS 104 9.431 90.539 9.372 1.00126.00 C ATOM 794 CG LYS 104 9.809 91.010 10.775 1.00126.00 C ATOM 795 CD LYS 104 9.625 89.918 11.827 1.00126.00 C ATOM 796 CE LYS 104 10.001 90.355 13.241 1.00126.00 C ATOM 797 NZ LYS 104 11.440 90.690 13.293 1.00126.00 N ATOM 798 C LYS 104 7.848 89.844 7.734 1.00126.00 C ATOM 799 O LYS 104 7.323 88.739 7.617 1.00126.00 O ATOM 800 N ASP 105 8.366 90.518 6.689 1.00102.83 N ATOM 801 CA ASP 105 8.365 89.914 5.397 1.00102.83 C ATOM 802 CB ASP 105 7.525 90.691 4.375 1.00102.83 C ATOM 803 CG ASP 105 7.191 89.719 3.262 1.00102.83 C ATOM 804 OD1 ASP 105 8.120 89.284 2.530 1.00102.83 O ATOM 805 OD2 ASP 105 5.986 89.374 3.158 1.00102.83 O ATOM 806 C ASP 105 9.778 89.871 4.910 1.00102.83 C ATOM 807 O ASP 105 10.421 90.908 4.745 1.00102.83 O ATOM 808 N ARG 106 10.304 88.651 4.684 1.00153.44 N ATOM 809 CA ARG 106 11.638 88.530 4.178 1.00153.44 C ATOM 810 CB ARG 106 12.163 87.083 4.130 1.00153.44 C ATOM 811 CG ARG 106 12.409 86.456 5.506 1.00153.44 C ATOM 812 CD ARG 106 12.931 85.017 5.440 1.00153.44 C ATOM 813 NE ARG 106 13.285 84.598 6.826 1.00153.44 N ATOM 814 CZ ARG 106 13.563 83.290 7.099 1.00153.44 C ATOM 815 NH1 ARG 106 13.488 82.352 6.109 1.00153.44 N ATOM 816 NH2 ARG 106 13.918 82.917 8.364 1.00153.44 N ATOM 817 C ARG 106 11.568 89.035 2.780 1.00153.44 C ATOM 818 O ARG 106 10.575 88.819 2.086 1.00153.44 O ATOM 819 N CYS 107 12.620 89.732 2.320 1.00140.61 N ATOM 820 CA CYS 107 12.495 90.306 1.020 1.00140.61 C ATOM 821 CB CYS 107 12.890 91.792 0.941 1.00140.61 C ATOM 822 SG CYS 107 14.659 92.077 1.246 1.00140.61 S ATOM 823 C CYS 107 13.346 89.575 0.049 1.00140.61 C ATOM 824 O CYS 107 13.944 88.541 0.341 1.00140.61 O ATOM 825 N GLY 108 13.392 90.151 -1.163 1.00310.04 N ATOM 826 CA GLY 108 14.126 89.649 -2.275 1.00310.04 C ATOM 827 C GLY 108 13.133 89.379 -3.351 1.00310.04 C ATOM 828 O GLY 108 12.671 88.253 -3.492 1.00310.04 O ATOM 829 N GLU 109 12.986 90.375 -4.256 1.00249.81 N ATOM 830 CA GLU 109 11.996 90.515 -5.295 1.00249.81 C ATOM 831 CB GLU 109 12.349 91.596 -6.331 1.00249.81 C ATOM 832 CG GLU 109 11.220 91.880 -7.322 1.00249.81 C ATOM 833 CD GLU 109 11.670 92.998 -8.250 1.00249.81 C ATOM 834 OE1 GLU 109 12.887 93.055 -8.572 1.00249.81 O ATOM 835 OE2 GLU 109 10.796 93.814 -8.648 1.00249.81 O ATOM 836 C GLU 109 11.707 89.243 -6.028 1.00249.81 C ATOM 837 O GLU 109 12.491 88.295 -6.030 1.00249.81 O ATOM 838 N VAL 110 10.506 89.226 -6.653 1.00154.98 N ATOM 839 CA VAL 110 9.909 88.107 -7.326 1.00154.98 C ATOM 840 CB VAL 110 8.476 88.322 -7.722 1.00154.98 C ATOM 841 CG1 VAL 110 8.440 89.436 -8.783 1.00154.98 C ATOM 842 CG2 VAL 110 7.885 86.990 -8.217 1.00154.98 C ATOM 843 C VAL 110 10.612 87.745 -8.584 1.00154.98 C ATOM 844 O VAL 110 11.116 88.586 -9.327 1.00154.98 O ATOM 845 N ARG 111 10.658 86.419 -8.803 1.00339.71 N ATOM 846 CA ARG 111 11.163 85.767 -9.966 1.00339.71 C ATOM 847 CB ARG 111 12.640 86.054 -10.267 1.00339.71 C ATOM 848 CG ARG 111 13.599 85.716 -9.130 1.00339.71 C ATOM 849 CD ARG 111 14.974 86.325 -9.374 1.00339.71 C ATOM 850 NE ARG 111 14.711 87.693 -9.899 1.00339.71 N ATOM 851 CZ ARG 111 15.717 88.429 -10.449 1.00339.71 C ATOM 852 NH1 ARG 111 16.992 87.945 -10.457 1.00339.71 N ATOM 853 NH2 ARG 111 15.438 89.647 -10.999 1.00339.71 N ATOM 854 C ARG 111 10.983 84.314 -9.690 1.00339.71 C ATOM 855 O ARG 111 10.619 83.933 -8.579 1.00339.71 O ATOM 856 N ASN 112 11.196 83.454 -10.699 1.00 65.96 N ATOM 857 CA ASN 112 11.042 82.059 -10.425 1.00 65.96 C ATOM 858 CB ASN 112 11.282 81.161 -11.652 1.00 65.96 C ATOM 859 CG ASN 112 10.164 81.394 -12.660 1.00 65.96 C ATOM 860 OD1 ASN 112 10.383 81.335 -13.869 1.00 65.96 O ATOM 861 ND2 ASN 112 8.931 81.665 -12.154 1.00 65.96 N ATOM 862 C ASN 112 12.085 81.717 -9.417 1.00 65.96 C ATOM 863 O ASN 112 11.825 81.008 -8.446 1.00 65.96 O ATOM 864 N GLU 113 13.300 82.261 -9.615 1.00106.42 N ATOM 865 CA GLU 113 14.401 81.960 -8.751 1.00106.42 C ATOM 866 CB GLU 113 15.682 82.720 -9.138 1.00106.42 C ATOM 867 CG GLU 113 16.336 82.248 -10.437 1.00106.42 C ATOM 868 CD GLU 113 17.168 81.015 -10.116 1.00106.42 C ATOM 869 OE1 GLU 113 16.784 80.272 -9.174 1.00106.42 O ATOM 870 OE2 GLU 113 18.197 80.798 -10.810 1.00106.42 O ATOM 871 C GLU 113 14.058 82.396 -7.367 1.00106.42 C ATOM 872 O GLU 113 14.277 81.637 -6.424 1.00106.42 O ATOM 873 N GLU 114 13.503 83.623 -7.243 1.00252.99 N ATOM 874 CA GLU 114 13.140 84.284 -6.014 1.00252.99 C ATOM 875 CB GLU 114 12.947 83.358 -4.802 1.00252.99 C ATOM 876 CG GLU 114 11.794 82.371 -4.965 1.00252.99 C ATOM 877 CD GLU 114 11.893 81.386 -3.812 1.00252.99 C ATOM 878 OE1 GLU 114 12.873 81.495 -3.028 1.00252.99 O ATOM 879 OE2 GLU 114 10.993 80.513 -3.701 1.00252.99 O ATOM 880 C GLU 114 14.284 85.185 -5.695 1.00252.99 C ATOM 881 O GLU 114 15.430 84.845 -5.986 1.00252.99 O ATOM 882 N ASN 115 14.040 86.368 -5.096 1.00217.58 N ATOM 883 CA ASN 115 15.223 87.132 -4.842 1.00217.58 C ATOM 884 CB ASN 115 15.202 88.619 -5.245 1.00217.58 C ATOM 885 CG ASN 115 15.189 88.741 -6.759 1.00217.58 C ATOM 886 OD1 ASN 115 14.351 89.436 -7.332 1.00217.58 O ATOM 887 ND2 ASN 115 16.159 88.062 -7.425 1.00217.58 N ATOM 888 C ASN 115 15.609 87.001 -3.404 1.00217.58 C ATOM 889 O ASN 115 14.803 87.002 -2.476 1.00217.58 O ATOM 890 N ALA 116 16.926 86.830 -3.271 1.00197.09 N ATOM 891 CA ALA 116 17.844 86.589 -2.203 1.00197.09 C ATOM 892 CB ALA 116 19.188 85.965 -2.609 1.00197.09 C ATOM 893 C ALA 116 18.129 87.705 -1.253 1.00197.09 C ATOM 894 O ALA 116 19.005 87.502 -0.421 1.00197.09 O ATOM 895 N CYS 117 17.610 88.936 -1.432 1.00104.25 N ATOM 896 CA CYS 117 17.978 89.988 -0.512 1.00104.25 C ATOM 897 CB CYS 117 17.145 91.263 -0.719 1.00104.25 C ATOM 898 SG CYS 117 17.299 91.921 -2.406 1.00104.25 S ATOM 899 C CYS 117 17.709 89.506 0.885 1.00104.25 C ATOM 900 O CYS 117 18.555 89.635 1.770 1.00104.25 O ATOM 901 N HIS 118 16.517 88.936 1.120 1.00137.22 N ATOM 902 CA HIS 118 16.241 88.311 2.380 1.00137.22 C ATOM 903 ND1 HIS 118 15.930 85.214 3.771 1.00137.22 N ATOM 904 CG HIS 118 16.835 86.253 3.812 1.00137.22 C ATOM 905 CB HIS 118 17.181 87.115 2.633 1.00137.22 C ATOM 906 NE2 HIS 118 16.747 85.261 5.838 1.00137.22 N ATOM 907 CD2 HIS 118 17.322 86.268 5.083 1.00137.22 C ATOM 908 CE1 HIS 118 15.918 84.656 5.007 1.00137.22 C ATOM 909 C HIS 118 16.427 89.303 3.478 1.00137.22 C ATOM 910 O HIS 118 16.618 88.925 4.633 1.00137.22 O ATOM 911 N CYS 119 16.360 90.610 3.169 1.00 45.91 N ATOM 912 CA CYS 119 16.469 91.530 4.258 1.00 45.91 C ATOM 913 CB CYS 119 16.834 92.967 3.848 1.00 45.91 C ATOM 914 SG CYS 119 16.966 94.066 5.289 1.00 45.91 S ATOM 915 C CYS 119 15.111 91.557 4.863 1.00 45.91 C ATOM 916 O CYS 119 14.114 91.524 4.145 1.00 45.91 O ATOM 917 N SER 120 15.019 91.598 6.204 1.00 83.64 N ATOM 918 CA SER 120 13.701 91.590 6.755 1.00 83.64 C ATOM 919 CB SER 120 13.645 91.312 8.266 1.00 83.64 C ATOM 920 OG SER 120 12.295 91.328 8.707 1.00 83.64 O ATOM 921 C SER 120 13.105 92.933 6.519 1.00 83.64 C ATOM 922 O SER 120 13.761 93.958 6.696 1.00 83.64 O ATOM 923 N GLU 121 11.830 92.953 6.088 1.00 89.36 N ATOM 924 CA GLU 121 11.159 94.197 5.874 1.00 89.36 C ATOM 925 CB GLU 121 10.929 94.521 4.385 1.00 89.36 C ATOM 926 CG GLU 121 10.091 93.483 3.634 1.00 89.36 C ATOM 927 CD GLU 121 10.124 93.841 2.152 1.00 89.36 C ATOM 928 OE1 GLU 121 10.630 94.946 1.822 1.00 89.36 O ATOM 929 OE2 GLU 121 9.646 93.012 1.332 1.00 89.36 O ATOM 930 C GLU 121 9.832 94.075 6.543 1.00 89.36 C ATOM 931 O GLU 121 9.157 93.053 6.425 1.00 89.36 O ATOM 932 N ASP 122 9.433 95.115 7.293 1.00 90.69 N ATOM 933 CA ASP 122 8.174 95.046 7.968 1.00 90.69 C ATOM 934 CB ASP 122 8.261 95.396 9.463 1.00 90.69 C ATOM 935 CG ASP 122 6.940 95.011 10.108 1.00 90.69 C ATOM 936 OD1 ASP 122 6.262 94.098 9.565 1.00 90.69 O ATOM 937 OD2 ASP 122 6.586 95.631 11.145 1.00 90.69 O ATOM 938 C ASP 122 7.276 96.053 7.332 1.00 90.69 C ATOM 939 O ASP 122 7.583 97.244 7.315 1.00 90.69 O ATOM 940 N CYS 123 6.144 95.600 6.763 1.00 56.13 N ATOM 941 CA CYS 123 5.254 96.563 6.188 1.00 56.13 C ATOM 942 CB CYS 123 4.824 96.231 4.748 1.00 56.13 C ATOM 943 SG CYS 123 6.208 96.337 3.571 1.00 56.13 S ATOM 944 C CYS 123 4.031 96.591 7.045 1.00 56.13 C ATOM 945 O CYS 123 3.230 95.657 7.034 1.00 56.13 O ATOM 946 N LEU 124 3.870 97.676 7.828 1.00 54.76 N ATOM 947 CA LEU 124 2.764 97.787 8.734 1.00 54.76 C ATOM 948 CB LEU 124 2.860 99.005 9.668 1.00 54.76 C ATOM 949 CG LEU 124 1.665 99.113 10.634 1.00 54.76 C ATOM 950 CD1 LEU 124 1.557 97.861 11.520 1.00 54.76 C ATOM 951 CD2 LEU 124 1.724 100.413 11.453 1.00 54.76 C ATOM 952 C LEU 124 1.481 97.904 7.984 1.00 54.76 C ATOM 953 O LEU 124 0.502 97.237 8.318 1.00 54.76 O ATOM 954 N SER 125 1.444 98.740 6.931 1.00151.48 N ATOM 955 CA SER 125 0.176 98.919 6.292 1.00151.48 C ATOM 956 CB SER 125 -0.029 100.344 5.755 1.00151.48 C ATOM 957 OG SER 125 -0.037 101.271 6.830 1.00151.48 O ATOM 958 C SER 125 0.103 97.989 5.135 1.00151.48 C ATOM 959 O SER 125 0.447 98.343 4.008 1.00151.48 O ATOM 960 N ARG 126 -0.365 96.756 5.392 1.00249.06 N ATOM 961 CA ARG 126 -0.518 95.842 4.309 1.00249.06 C ATOM 962 CB ARG 126 0.539 94.727 4.291 1.00249.06 C ATOM 963 CG ARG 126 1.956 95.253 4.068 1.00249.06 C ATOM 964 CD ARG 126 2.958 94.163 3.692 1.00249.06 C ATOM 965 NE ARG 126 2.654 93.775 2.287 1.00249.06 N ATOM 966 CZ ARG 126 3.160 94.513 1.258 1.00249.06 C ATOM 967 NH1 ARG 126 3.992 95.562 1.522 1.00249.06 N ATOM 968 NH2 ARG 126 2.828 94.211 -0.031 1.00249.06 N ATOM 969 C ARG 126 -1.837 95.174 4.478 1.00249.06 C ATOM 970 O ARG 126 -1.950 94.167 5.176 1.00249.06 O ATOM 971 N GLY 127 -2.876 95.728 3.834 1.00 56.45 N ATOM 972 CA GLY 127 -4.167 95.116 3.889 1.00 56.45 C ATOM 973 C GLY 127 -4.706 95.264 5.268 1.00 56.45 C ATOM 974 O GLY 127 -5.684 94.613 5.632 1.00 56.45 O ATOM 975 N ASP 128 -4.079 96.119 6.089 1.00 49.29 N ATOM 976 CA ASP 128 -4.609 96.255 7.407 1.00 49.29 C ATOM 977 CB ASP 128 -3.614 95.862 8.512 1.00 49.29 C ATOM 978 CG ASP 128 -3.413 94.353 8.444 1.00 49.29 C ATOM 979 OD1 ASP 128 -4.425 93.625 8.257 1.00 49.29 O ATOM 980 OD2 ASP 128 -2.243 93.908 8.586 1.00 49.29 O ATOM 981 C ASP 128 -4.968 97.685 7.607 1.00 49.29 C ATOM 982 O ASP 128 -4.106 98.517 7.886 1.00 49.29 O ATOM 983 N CYS 129 -6.263 98.010 7.448 1.00 58.83 N ATOM 984 CA CYS 129 -6.693 99.363 7.620 1.00 58.83 C ATOM 985 CB CYS 129 -7.323 99.978 6.356 1.00 58.83 C ATOM 986 SG CYS 129 -7.758 101.735 6.546 1.00 58.83 S ATOM 987 C CYS 129 -7.746 99.311 8.679 1.00 58.83 C ATOM 988 O CYS 129 -8.172 98.232 9.087 1.00 58.83 O ATOM 989 N CYS 130 -8.181 100.481 9.177 1.00 59.70 N ATOM 990 CA CYS 130 -9.204 100.459 10.174 1.00 59.70 C ATOM 991 CB CYS 130 -9.458 101.833 10.821 1.00 59.70 C ATOM 992 SG CYS 130 -8.022 102.467 11.738 1.00 59.70 S ATOM 993 C CYS 130 -10.460 100.068 9.474 1.00 59.70 C ATOM 994 O CYS 130 -11.159 100.911 8.915 1.00 59.70 O ATOM 995 N THR 131 -10.767 98.757 9.466 1.00195.95 N ATOM 996 CA THR 131 -11.968 98.322 8.821 1.00195.95 C ATOM 997 CB THR 131 -11.743 97.782 7.441 1.00195.95 C ATOM 998 OG1 THR 131 -11.174 98.783 6.609 1.00195.95 O ATOM 999 CG2 THR 131 -13.091 97.312 6.870 1.00195.95 C ATOM 1000 C THR 131 -12.547 97.209 9.625 1.00195.95 C ATOM 1001 O THR 131 -11.825 96.422 10.233 1.00195.95 O ATOM 1002 N ASN 132 -13.890 97.130 9.655 1.00 73.64 N ATOM 1003 CA ASN 132 -14.527 96.055 10.348 1.00 73.64 C ATOM 1004 CB ASN 132 -16.061 96.181 10.373 1.00 73.64 C ATOM 1005 CG ASN 132 -16.417 97.277 11.369 1.00 73.64 C ATOM 1006 OD1 ASN 132 -15.892 97.305 12.481 1.00 73.64 O ATOM 1007 ND2 ASN 132 -17.327 98.205 10.967 1.00 73.64 N ATOM 1008 C ASN 132 -14.163 94.813 9.608 1.00 73.64 C ATOM 1009 O ASN 132 -13.826 93.793 10.206 1.00 73.64 O ATOM 1010 N TYR 133 -14.195 94.891 8.263 1.00248.47 N ATOM 1011 CA TYR 133 -13.848 93.760 7.459 1.00248.47 C ATOM 1012 CB TYR 133 -14.181 93.931 5.965 1.00248.47 C ATOM 1013 CG TYR 133 -15.618 94.306 5.807 1.00248.47 C ATOM 1014 CD1 TYR 133 -16.608 93.353 5.755 1.00248.47 C ATOM 1015 CD2 TYR 133 -15.969 95.634 5.715 1.00248.47 C ATOM 1016 CE1 TYR 133 -17.927 93.722 5.608 1.00248.47 C ATOM 1017 CE2 TYR 133 -17.284 96.008 5.568 1.00248.47 C ATOM 1018 CZ TYR 133 -18.266 95.051 5.513 1.00248.47 C ATOM 1019 OH TYR 133 -19.616 95.436 5.362 1.00248.47 O ATOM 1020 C TYR 133 -12.360 93.679 7.534 1.00248.47 C ATOM 1021 O TYR 133 -11.674 94.689 7.383 1.00248.47 O ATOM 1022 N GLN 134 -11.804 92.480 7.790 1.00106.88 N ATOM 1023 CA GLN 134 -10.377 92.424 7.872 1.00106.88 C ATOM 1024 CB GLN 134 -9.860 91.382 8.890 1.00106.88 C ATOM 1025 CG GLN 134 -8.357 91.472 9.174 1.00106.88 C ATOM 1026 CD GLN 134 -8.046 90.651 10.424 1.00106.88 C ATOM 1027 OE1 GLN 134 -8.628 89.593 10.662 1.00106.88 O ATOM 1028 NE2 GLN 134 -7.102 91.162 11.259 1.00106.88 N ATOM 1029 C GLN 134 -9.874 92.086 6.506 1.00106.88 C ATOM 1030 O GLN 134 -10.268 91.080 5.917 1.00106.88 O ATOM 1031 N VAL 135 -8.996 92.947 5.956 1.00 39.06 N ATOM 1032 CA VAL 135 -8.478 92.710 4.641 1.00 39.06 C ATOM 1033 CB VAL 135 -7.934 93.936 3.964 1.00 39.06 C ATOM 1034 CG1 VAL 135 -7.331 93.515 2.613 1.00 39.06 C ATOM 1035 CG2 VAL 135 -9.062 94.975 3.842 1.00 39.06 C ATOM 1036 C VAL 135 -7.359 91.737 4.778 1.00 39.06 C ATOM 1037 O VAL 135 -6.678 91.692 5.801 1.00 39.06 O ATOM 1038 N VAL 136 -7.160 90.902 3.744 1.00 39.79 N ATOM 1039 CA VAL 136 -6.117 89.926 3.804 1.00 39.79 C ATOM 1040 CB VAL 136 -6.519 88.610 3.198 1.00 39.79 C ATOM 1041 CG1 VAL 136 -5.322 87.645 3.242 1.00 39.79 C ATOM 1042 CG2 VAL 136 -7.761 88.096 3.946 1.00 39.79 C ATOM 1043 C VAL 136 -4.949 90.455 3.037 1.00 39.79 C ATOM 1044 O VAL 136 -5.111 91.150 2.035 1.00 39.79 O ATOM 1045 N CYS 137 -3.726 90.151 3.517 1.00110.01 N ATOM 1046 CA CYS 137 -2.539 90.566 2.831 1.00110.01 C ATOM 1047 CB CYS 137 -1.260 90.055 3.516 1.00110.01 C ATOM 1048 SG CYS 137 0.250 90.569 2.647 1.00110.01 S ATOM 1049 C CYS 137 -2.612 89.912 1.499 1.00110.01 C ATOM 1050 O CYS 137 -2.364 90.532 0.466 1.00110.01 O ATOM 1051 N LYS 138 -2.987 88.623 1.499 1.00193.36 N ATOM 1052 CA LYS 138 -3.160 87.948 0.256 1.00193.36 C ATOM 1053 CB LYS 138 -3.603 86.482 0.417 1.00193.36 C ATOM 1054 CG LYS 138 -2.632 85.612 1.219 1.00193.36 C ATOM 1055 CD LYS 138 -3.257 84.297 1.691 1.00193.36 C ATOM 1056 CE LYS 138 -2.316 83.418 2.517 1.00193.36 C ATOM 1057 NZ LYS 138 -3.051 82.247 3.044 1.00193.36 N ATOM 1058 C LYS 138 -4.302 88.677 -0.358 1.00193.36 C ATOM 1059 O LYS 138 -5.121 89.251 0.350 1.00193.36 O ATOM 1060 N GLY 139 -4.387 88.720 -1.693 1.00 77.39 N ATOM 1061 CA GLY 139 -5.489 89.428 -2.273 1.00 77.39 C ATOM 1062 C GLY 139 -5.006 90.779 -2.699 1.00 77.39 C ATOM 1063 O GLY 139 -5.694 91.482 -3.436 1.00 77.39 O ATOM 1064 N GLU 140 -3.811 91.188 -2.229 1.00 76.79 N ATOM 1065 CA GLU 140 -3.265 92.444 -2.651 1.00 76.79 C ATOM 1066 CB GLU 140 -2.195 92.987 -1.685 1.00 76.79 C ATOM 1067 CG GLU 140 -2.783 93.345 -0.316 1.00 76.79 C ATOM 1068 CD GLU 140 -1.668 93.773 0.630 1.00 76.79 C ATOM 1069 OE1 GLU 140 -0.477 93.715 0.222 1.00 76.79 O ATOM 1070 OE2 GLU 140 -1.999 94.161 1.782 1.00 76.79 O ATOM 1071 C GLU 140 -2.643 92.187 -3.983 1.00 76.79 C ATOM 1072 O GLU 140 -2.111 91.105 -4.226 1.00 76.79 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 93.26 36.4 88 100.0 88 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 92.65 38.7 62 100.0 62 ARMSMC BURIED . . . . . . . . 94.69 30.8 26 100.0 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 101.76 33.3 39 100.0 39 ARMSSC1 RELIABLE SIDE CHAINS . 105.90 27.8 36 100.0 36 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 96.82 38.5 26 100.0 26 ARMSSC1 BURIED . . . . . . . . 110.97 23.1 13 100.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.61 47.8 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 60.27 50.0 18 100.0 18 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 75.40 37.5 16 100.0 16 ARMSSC2 BURIED . . . . . . . . 62.11 71.4 7 100.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.15 30.8 13 100.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 61.88 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 51.15 30.0 10 100.0 10 ARMSSC3 BURIED . . . . . . . . 92.52 33.3 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 32.88 83.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 32.88 83.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 20.68 100.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 48.86 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.45 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.45 45 100.0 45 CRMSCA CRN = ALL/NP . . . . . 0.2545 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 11.43 32 100.0 32 CRMSCA BURIED . . . . . . . . 11.51 13 100.0 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.54 221 100.0 221 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 11.58 156 100.0 156 CRMSMC BURIED . . . . . . . . 11.44 65 100.0 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.57 165 100.0 165 CRMSSC RELIABLE SIDE CHAINS . 12.47 145 100.0 145 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 12.22 112 100.0 112 CRMSSC BURIED . . . . . . . . 13.27 53 100.0 53 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.98 345 100.0 345 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 11.83 240 100.0 240 CRMSALL BURIED . . . . . . . . 12.32 105 100.0 105 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 128.723 0.799 0.823 45 100.0 45 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 124.937 0.797 0.822 32 100.0 32 ERRCA BURIED . . . . . . . . 138.042 0.803 0.827 13 100.0 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 128.539 0.797 0.822 221 100.0 221 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 124.552 0.794 0.820 156 100.0 156 ERRMC BURIED . . . . . . . . 138.106 0.804 0.828 65 100.0 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 148.583 0.815 0.836 165 100.0 165 ERRSC RELIABLE SIDE CHAINS . 156.666 0.828 0.847 145 100.0 145 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 138.083 0.806 0.829 112 100.0 112 ERRSC BURIED . . . . . . . . 170.771 0.832 0.850 53 100.0 53 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 138.240 0.806 0.829 345 100.0 345 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 131.052 0.801 0.825 240 100.0 240 ERRALL BURIED . . . . . . . . 154.669 0.819 0.840 105 100.0 105 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 18 45 45 DISTCA CA (P) 0.00 0.00 0.00 2.22 40.00 45 DISTCA CA (RMS) 0.00 0.00 0.00 4.94 8.06 DISTCA ALL (N) 0 0 0 7 131 345 345 DISTALL ALL (P) 0.00 0.00 0.00 2.03 37.97 345 DISTALL ALL (RMS) 0.00 0.00 0.00 4.67 8.18 DISTALL END of the results output