####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 369), selected 40 , name T0543TS214_1-D1 # Molecule2: number of CA atoms 40 ( 303), selected 40 , name T0543-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0543TS214_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 56 - 95 3.87 3.87 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 76 - 93 1.53 7.76 LCS_AVERAGE: 32.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 78 - 93 0.76 8.26 LCS_AVERAGE: 22.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 56 G 56 0 9 40 3 6 8 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT S 57 S 57 3 9 40 1 3 8 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 58 C 58 3 9 40 3 3 3 5 8 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT K 59 K 59 3 9 40 3 6 9 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT G 60 G 60 3 9 40 3 6 8 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT R 61 R 61 3 9 40 3 3 4 8 13 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 62 C 62 3 9 40 3 3 8 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT F 63 F 63 4 9 40 3 4 6 10 12 15 22 25 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT E 64 E 64 4 9 40 3 4 8 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT L 65 L 65 4 8 40 4 4 5 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT Q 66 Q 66 4 8 40 4 5 8 10 11 13 19 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT E 67 E 67 4 6 40 4 4 4 10 14 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT V 68 V 68 4 6 40 4 4 4 5 6 17 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT G 69 G 69 4 6 40 0 3 4 8 11 17 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT P 70 P 70 4 10 40 1 3 6 8 10 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT P 71 P 71 4 10 40 2 3 4 4 10 15 20 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT D 72 D 72 7 10 40 4 7 8 10 11 13 19 25 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 73 C 73 7 10 40 4 7 8 10 11 13 19 25 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT R 74 R 74 7 10 40 5 7 8 10 11 13 19 25 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 75 C 75 7 13 40 5 7 8 10 12 13 19 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT D 76 D 76 7 18 40 5 7 8 10 12 14 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT N 77 N 77 10 18 40 5 7 9 10 17 17 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT L 78 L 78 16 18 40 5 8 14 16 17 17 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 79 C 79 16 18 40 8 15 15 16 17 17 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT K 80 K 80 16 18 40 8 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT S 81 S 81 16 18 40 8 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT Y 82 Y 82 16 18 40 8 15 15 16 17 17 22 25 30 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT S 83 S 83 16 18 40 8 15 15 16 17 17 19 25 28 31 37 40 40 40 40 40 40 40 40 40 LCS_GDT S 84 S 84 16 18 40 8 15 15 16 17 17 19 25 28 31 37 40 40 40 40 40 40 40 40 40 LCS_GDT C 85 C 85 16 18 40 8 15 15 16 17 17 22 25 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 86 C 86 16 18 40 8 15 15 16 17 17 19 25 28 32 38 40 40 40 40 40 40 40 40 40 LCS_GDT H 87 H 87 16 18 40 3 15 15 16 17 17 19 25 28 33 38 40 40 40 40 40 40 40 40 40 LCS_GDT D 88 D 88 16 18 40 7 15 15 16 17 18 22 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT F 89 F 89 16 18 40 6 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT D 90 D 90 16 18 40 6 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT E 91 E 91 16 18 40 7 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT L 92 L 92 16 18 40 7 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT C 93 C 93 16 18 40 6 15 15 16 17 17 19 25 30 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT L 94 L 94 3 17 40 0 3 4 4 4 13 19 24 31 35 38 40 40 40 40 40 40 40 40 40 LCS_GDT K 95 K 95 3 3 40 0 3 4 10 11 13 20 28 31 35 38 40 40 40 40 40 40 40 40 40 LCS_AVERAGE LCS_A: 51.73 ( 22.56 32.62 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 15 15 16 17 18 23 28 31 35 38 40 40 40 40 40 40 40 40 40 GDT PERCENT_AT 20.00 37.50 37.50 40.00 42.50 45.00 57.50 70.00 77.50 87.50 95.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.18 0.58 0.58 0.76 1.10 2.17 2.75 3.03 3.22 3.47 3.69 3.87 3.87 3.87 3.87 3.87 3.87 3.87 3.87 3.87 GDT RMS_ALL_AT 8.63 8.24 8.24 8.26 7.97 4.36 3.95 3.99 4.02 3.99 3.90 3.87 3.87 3.87 3.87 3.87 3.87 3.87 3.87 3.87 # Checking swapping # possible swapping detected: E 64 E 64 # possible swapping detected: E 67 E 67 # possible swapping detected: F 89 F 89 # possible swapping detected: D 90 D 90 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 56 G 56 1.167 0 0.608 0.608 2.368 79.524 79.524 LGA S 57 S 57 1.723 0 0.556 0.533 3.792 59.762 57.698 LGA C 58 C 58 2.933 0 0.615 0.576 7.513 69.048 51.587 LGA K 59 K 59 1.657 0 0.535 0.885 5.927 69.286 50.741 LGA G 60 G 60 2.100 0 0.666 0.666 2.100 70.952 70.952 LGA R 61 R 61 3.473 0 0.637 1.177 14.934 32.857 16.017 LGA C 62 C 62 2.484 0 0.672 0.600 3.208 66.905 61.270 LGA F 63 F 63 5.280 0 0.213 0.660 10.695 32.976 13.939 LGA E 64 E 64 3.473 0 0.716 0.817 5.984 43.690 34.286 LGA L 65 L 65 1.863 0 0.668 1.377 6.026 63.452 46.964 LGA Q 66 Q 66 4.051 0 0.067 0.936 9.427 54.167 28.677 LGA E 67 E 67 2.894 0 0.146 1.126 11.339 59.286 29.894 LGA V 68 V 68 3.303 0 0.043 0.989 6.963 47.143 33.810 LGA G 69 G 69 2.474 0 0.331 0.331 4.759 49.048 49.048 LGA P 70 P 70 3.409 0 0.664 0.535 7.524 43.690 32.177 LGA P 71 P 71 3.845 0 0.591 0.605 7.355 48.690 34.150 LGA D 72 D 72 5.964 3 0.730 0.672 8.349 24.286 12.738 LGA C 73 C 73 5.390 0 0.093 0.819 7.625 26.190 23.016 LGA R 74 R 74 4.807 0 0.059 1.469 5.047 30.119 37.922 LGA C 75 C 75 3.990 0 0.195 0.193 4.437 40.238 39.206 LGA D 76 D 76 3.298 0 0.033 1.083 5.142 50.000 45.357 LGA N 77 N 77 3.427 0 0.592 0.753 6.119 55.476 40.357 LGA L 78 L 78 3.271 0 0.082 0.655 6.989 48.452 35.179 LGA C 79 C 79 3.027 0 0.169 0.717 5.284 53.810 48.571 LGA K 80 K 80 3.133 0 0.119 0.981 5.226 48.810 41.905 LGA S 81 S 81 3.127 0 0.063 0.643 5.096 42.619 50.079 LGA Y 82 Y 82 5.855 0 0.020 0.158 7.944 18.333 18.413 LGA S 83 S 83 7.028 0 0.159 0.154 8.398 10.476 8.571 LGA S 84 S 84 7.232 0 0.026 0.625 7.612 11.667 11.190 LGA C 85 C 85 4.842 0 0.059 0.828 6.223 22.857 31.984 LGA C 86 C 86 5.761 0 0.041 0.056 6.466 26.310 23.968 LGA H 87 H 87 5.582 0 0.058 1.193 6.049 26.429 32.095 LGA D 88 D 88 3.682 0 0.115 0.495 5.829 52.619 41.488 LGA F 89 F 89 2.170 0 0.172 1.590 5.715 64.881 50.736 LGA D 90 D 90 2.722 0 0.056 0.668 3.812 57.262 51.131 LGA E 91 E 91 2.521 0 0.076 0.880 3.103 59.167 61.429 LGA L 92 L 92 2.737 0 0.071 1.187 4.768 51.190 52.381 LGA C 93 C 93 4.650 0 0.079 0.833 7.799 31.190 27.222 LGA L 94 L 94 4.455 0 0.658 1.131 9.553 34.286 20.655 LGA K 95 K 95 4.152 0 0.631 0.949 8.454 28.452 19.471 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 303 303 100.00 40 SUMMARY(RMSD_GDC): 3.873 3.957 5.064 45.140 37.895 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 40 4.0 28 3.03 61.875 56.358 0.895 LGA_LOCAL RMSD: 3.029 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.993 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 3.873 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.353607 * X + 0.161193 * Y + -0.921400 * Z + 7.675031 Y_new = -0.303445 * X + 0.951536 * Y + 0.050012 * Z + 66.081993 Z_new = 0.884807 * X + 0.261910 * Y + 0.385383 * Z + 22.062952 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.709201 -1.086079 0.596909 [DEG: -40.6342 -62.2277 34.2003 ] ZXZ: -1.625021 1.175173 1.283006 [DEG: -93.1069 67.3325 73.5108 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0543TS214_1-D1 REMARK 2: T0543-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0543TS214_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 40 4.0 28 3.03 56.358 3.87 REMARK ---------------------------------------------------------- MOLECULE T0543TS214_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0543 REMARK MODEL 1 REMARK PARENT N/A ATOM 466 N GLY 56 35.658 73.101 18.747 1.00 50.00 N ATOM 467 CA GLY 56 34.278 73.669 18.578 1.00 50.00 C ATOM 468 C GLY 56 33.313 73.285 19.535 1.00 50.00 C ATOM 469 O GLY 56 33.460 72.297 20.382 1.00 50.00 O ATOM 470 H GLY 56 36.286 73.250 18.120 1.00 50.00 H ATOM 471 N SER 57 30.424 75.149 19.576 1.00 50.00 N ATOM 472 CA SER 57 31.356 76.015 18.822 1.00 50.00 C ATOM 473 C SER 57 31.002 75.972 17.382 1.00 50.00 C ATOM 474 O SER 57 30.786 77.021 16.711 1.00 50.00 O ATOM 475 CB SER 57 32.803 75.571 19.049 1.00 50.00 C ATOM 476 HG SER 57 33.629 77.168 18.556 1.00 50.00 H ATOM 477 OG SER 57 33.705 76.378 18.314 1.00 50.00 O ATOM 478 N CYS 58 30.888 74.771 16.815 1.00 50.00 N ATOM 479 CA CYS 58 30.518 74.506 15.455 1.00 50.00 C ATOM 480 C CYS 58 29.046 74.365 15.210 1.00 50.00 C ATOM 481 O CYS 58 28.290 73.836 16.027 1.00 50.00 O ATOM 482 H CYS 58 31.070 74.088 17.373 1.00 50.00 H ATOM 483 CB CYS 58 31.200 73.232 14.953 1.00 50.00 C ATOM 484 SG CYS 58 33.004 73.331 14.875 1.00 50.00 S ATOM 485 N LYS 59 28.595 74.817 14.025 1.00 50.00 N ATOM 486 CA LYS 59 27.183 74.764 13.605 1.00 50.00 C ATOM 487 C LYS 59 26.931 73.790 12.463 1.00 50.00 C ATOM 488 O LYS 59 25.906 73.889 11.756 1.00 50.00 O ATOM 489 H LYS 59 29.215 75.168 13.476 1.00 50.00 H ATOM 490 CB LYS 59 26.695 76.154 13.188 1.00 50.00 C ATOM 491 CD LYS 59 26.011 78.465 13.886 1.00 50.00 C ATOM 492 CE LYS 59 26.914 79.282 12.975 1.00 50.00 C ATOM 493 CG LYS 59 26.685 77.172 14.316 1.00 50.00 C ATOM 494 HZ1 LYS 59 26.918 81.093 12.192 1.00 50.00 H ATOM 495 HZ2 LYS 59 26.286 81.077 13.501 1.00 50.00 H ATOM 496 HZ3 LYS 59 25.568 80.578 12.340 1.00 50.00 H ATOM 497 NZ LYS 59 26.366 80.644 12.727 1.00 50.00 N ATOM 498 N GLY 60 27.868 72.855 12.315 1.00 50.00 N ATOM 499 CA GLY 60 27.789 71.829 11.226 1.00 50.00 C ATOM 500 C GLY 60 26.531 70.988 11.597 1.00 50.00 C ATOM 501 O GLY 60 26.300 70.702 12.811 1.00 50.00 O ATOM 502 H GLY 60 28.562 72.850 12.889 1.00 50.00 H ATOM 503 N ARG 61 25.753 70.639 10.572 1.00 50.00 N ATOM 504 CA ARG 61 24.559 69.873 10.851 1.00 50.00 C ATOM 505 C ARG 61 24.128 68.808 9.858 1.00 50.00 C ATOM 506 O ARG 61 24.618 68.669 8.781 1.00 50.00 O ATOM 507 H ARG 61 25.954 70.868 9.724 1.00 50.00 H ATOM 508 CB ARG 61 23.354 70.800 11.017 1.00 50.00 C ATOM 509 CD ARG 61 21.919 72.633 10.079 1.00 50.00 C ATOM 510 HE ARG 61 22.147 74.402 9.162 1.00 50.00 H ATOM 511 NE ARG 61 21.768 73.641 9.031 1.00 50.00 N ATOM 512 CG ARG 61 23.151 71.769 9.864 1.00 50.00 C ATOM 513 CZ ARG 61 21.090 73.451 7.905 1.00 50.00 C ATOM 514 HH11 ARG 61 21.392 75.180 7.157 1.00 50.00 H ATOM 515 HH12 ARG 61 20.568 74.303 6.279 1.00 50.00 H ATOM 516 NH1 ARG 61 21.006 74.425 7.008 1.00 50.00 N ATOM 517 HH21 ARG 61 20.551 71.656 8.256 1.00 50.00 H ATOM 518 HH22 ARG 61 20.058 72.165 6.946 1.00 50.00 H ATOM 519 NH2 ARG 61 20.496 72.287 7.675 1.00 50.00 N ATOM 520 N CYS 62 24.208 71.161 13.771 1.00 50.00 N ATOM 521 CA CYS 62 22.745 71.233 13.815 1.00 50.00 C ATOM 522 C CYS 62 21.953 69.965 13.496 1.00 50.00 C ATOM 523 O CYS 62 20.794 69.896 13.886 1.00 50.00 O ATOM 524 CB CYS 62 22.233 72.309 12.856 1.00 50.00 C ATOM 525 SG CYS 62 22.677 73.998 13.325 1.00 50.00 S ATOM 526 N PHE 63 22.497 69.018 12.744 1.00 50.00 N ATOM 527 CA PHE 63 21.645 67.931 12.245 1.00 50.00 C ATOM 528 C PHE 63 22.094 66.559 12.714 1.00 50.00 C ATOM 529 O PHE 63 21.326 65.591 12.671 1.00 50.00 O ATOM 530 H PHE 63 23.373 69.033 12.538 1.00 50.00 H ATOM 531 CB PHE 63 21.600 67.945 10.716 1.00 50.00 C ATOM 532 CG PHE 63 21.028 69.207 10.138 1.00 50.00 C ATOM 533 CZ PHE 63 19.968 71.541 9.062 1.00 50.00 C ATOM 534 CD1 PHE 63 20.776 70.304 10.945 1.00 50.00 C ATOM 535 CE1 PHE 63 20.250 71.465 10.412 1.00 50.00 C ATOM 536 CD2 PHE 63 20.740 69.299 8.787 1.00 50.00 C ATOM 537 CE2 PHE 63 20.213 70.460 8.255 1.00 50.00 C ATOM 538 N GLU 64 23.395 66.566 12.855 1.00 50.00 N ATOM 539 CA GLU 64 23.778 65.115 12.824 1.00 50.00 C ATOM 540 C GLU 64 23.325 64.222 13.953 1.00 50.00 C ATOM 541 O GLU 64 23.321 63.009 13.766 1.00 50.00 O ATOM 542 H GLU 64 24.030 67.197 12.956 1.00 50.00 H ATOM 543 CB GLU 64 25.298 64.964 12.756 1.00 50.00 C ATOM 544 CD GLU 64 27.418 65.275 11.419 1.00 50.00 C ATOM 545 CG GLU 64 25.910 65.420 11.442 1.00 50.00 C ATOM 546 OE1 GLU 64 28.003 64.979 12.482 1.00 50.00 O ATOM 547 OE2 GLU 64 28.017 65.459 10.338 1.00 50.00 O ATOM 548 N LEU 65 23.140 64.796 15.108 1.00 50.00 N ATOM 549 CA LEU 65 22.741 63.967 16.249 1.00 50.00 C ATOM 550 C LEU 65 23.683 64.237 17.420 1.00 50.00 C ATOM 551 O LEU 65 24.718 64.882 17.233 1.00 50.00 O ATOM 552 H LEU 65 23.253 65.683 15.214 1.00 50.00 H ATOM 553 CB LEU 65 22.751 62.486 15.864 1.00 50.00 C ATOM 554 CG LEU 65 22.351 61.497 16.961 1.00 50.00 C ATOM 555 CD1 LEU 65 20.911 61.727 17.393 1.00 50.00 C ATOM 556 CD2 LEU 65 22.539 60.064 16.489 1.00 50.00 C ATOM 557 N GLN 66 23.405 63.792 18.592 1.00 50.00 N ATOM 558 CA GLN 66 24.413 64.098 19.615 1.00 50.00 C ATOM 559 C GLN 66 25.768 63.461 19.260 1.00 50.00 C ATOM 560 O GLN 66 25.859 62.518 18.471 1.00 50.00 O ATOM 561 H GLN 66 22.667 63.328 18.813 1.00 50.00 H ATOM 562 CB GLN 66 23.946 63.613 20.990 1.00 50.00 C ATOM 563 CD GLN 66 25.177 61.479 21.546 1.00 50.00 C ATOM 564 CG GLN 66 23.862 62.100 21.118 1.00 50.00 C ATOM 565 OE1 GLN 66 25.967 62.101 22.256 1.00 50.00 O ATOM 566 HE21 GLN 66 26.181 59.830 21.340 1.00 50.00 H ATOM 567 HE22 GLN 66 24.811 59.826 20.596 1.00 50.00 H ATOM 568 NE2 GLN 66 25.415 60.246 21.115 1.00 50.00 N ATOM 569 N GLU 67 26.824 63.976 19.905 1.00 50.00 N ATOM 570 CA GLU 67 28.150 63.371 19.692 1.00 50.00 C ATOM 571 C GLU 67 28.571 62.639 20.995 1.00 50.00 C ATOM 572 O GLU 67 28.219 63.036 22.101 1.00 50.00 O ATOM 573 H GLU 67 26.734 64.680 20.460 1.00 50.00 H ATOM 574 CB GLU 67 29.169 64.441 19.294 1.00 50.00 C ATOM 575 CD GLU 67 29.920 66.148 17.592 1.00 50.00 C ATOM 576 CG GLU 67 28.876 65.114 17.964 1.00 50.00 C ATOM 577 OE1 GLU 67 30.732 66.515 18.468 1.00 50.00 O ATOM 578 OE2 GLU 67 29.925 66.594 16.425 1.00 50.00 O ATOM 579 N VAL 68 29.339 61.593 20.763 1.00 50.00 N ATOM 580 CA VAL 68 29.883 60.756 21.824 1.00 50.00 C ATOM 581 C VAL 68 31.254 60.214 21.401 1.00 50.00 C ATOM 582 O VAL 68 31.613 60.233 20.220 1.00 50.00 O ATOM 583 H VAL 68 29.524 61.405 19.903 1.00 50.00 H ATOM 584 CB VAL 68 28.929 59.599 22.176 1.00 50.00 C ATOM 585 CG1 VAL 68 27.637 60.137 22.773 1.00 50.00 C ATOM 586 CG2 VAL 68 28.639 58.755 20.944 1.00 50.00 C ATOM 587 N GLY 69 28.728 65.251 21.844 1.00 50.00 N ATOM 588 CA GLY 69 29.674 64.045 22.098 1.00 50.00 C ATOM 589 C GLY 69 31.175 64.391 22.165 1.00 50.00 C ATOM 590 O GLY 69 31.765 64.915 21.178 1.00 50.00 O ATOM 591 N PRO 70 31.755 64.145 23.311 1.00 50.00 N ATOM 592 CA PRO 70 33.239 64.301 23.393 1.00 50.00 C ATOM 593 C PRO 70 33.455 65.518 24.109 1.00 50.00 C ATOM 594 O PRO 70 34.564 65.516 24.722 1.00 50.00 O ATOM 595 CB PRO 70 33.686 64.354 21.932 1.00 50.00 C ATOM 596 CD PRO 70 31.293 64.355 21.905 1.00 50.00 C ATOM 597 CG PRO 70 32.505 64.895 21.198 1.00 50.00 C ATOM 598 N PRO 71 32.393 66.469 24.118 1.00 50.00 N ATOM 599 CA PRO 71 32.487 67.652 24.858 1.00 50.00 C ATOM 600 C PRO 71 32.219 67.328 26.342 1.00 50.00 C ATOM 601 O PRO 71 31.518 66.400 26.646 1.00 50.00 O ATOM 602 CB PRO 71 31.411 68.555 24.250 1.00 50.00 C ATOM 603 CD PRO 71 31.325 66.472 23.075 1.00 50.00 C ATOM 604 CG PRO 71 31.129 67.953 22.914 1.00 50.00 C ATOM 605 N ASP 72 32.662 68.201 27.080 1.00 50.00 N ATOM 606 CA ASP 72 32.216 68.076 28.465 1.00 50.00 C ATOM 607 C ASP 72 30.977 68.944 28.693 1.00 50.00 C ATOM 608 O ASP 72 30.457 68.784 29.796 1.00 50.00 O ATOM 609 H ASP 72 33.210 68.874 26.844 1.00 50.00 H ATOM 610 CB ASP 72 33.338 68.470 29.426 1.00 50.00 C ATOM 611 CG ASP 72 34.502 67.500 29.393 1.00 50.00 C ATOM 612 OD1 ASP 72 34.284 66.323 29.038 1.00 50.00 O ATOM 613 OD2 ASP 72 35.632 67.916 29.723 1.00 50.00 O ATOM 614 N CYS 73 30.587 69.802 27.766 1.00 50.00 N ATOM 615 CA CYS 73 29.416 70.680 27.938 1.00 50.00 C ATOM 616 C CYS 73 28.372 70.343 26.874 1.00 50.00 C ATOM 617 O CYS 73 28.812 70.260 25.700 1.00 50.00 O ATOM 618 H CYS 73 31.068 69.838 27.006 1.00 50.00 H ATOM 619 CB CYS 73 29.831 72.149 27.856 1.00 50.00 C ATOM 620 SG CYS 73 31.014 72.664 29.122 1.00 50.00 S ATOM 621 N ARG 74 27.138 70.289 27.224 1.00 50.00 N ATOM 622 CA ARG 74 26.067 70.102 26.238 1.00 50.00 C ATOM 623 C ARG 74 25.584 71.382 25.556 1.00 50.00 C ATOM 624 O ARG 74 25.599 72.478 26.159 1.00 50.00 O ATOM 625 H ARG 74 26.937 70.368 28.098 1.00 50.00 H ATOM 626 CB ARG 74 24.855 69.428 26.886 1.00 50.00 C ATOM 627 CD ARG 74 25.443 67.046 26.355 1.00 50.00 C ATOM 628 HE ARG 74 27.412 67.354 26.583 1.00 50.00 H ATOM 629 NE ARG 74 26.862 67.017 26.011 1.00 50.00 N ATOM 630 CG ARG 74 25.144 68.049 27.457 1.00 50.00 C ATOM 631 CZ ARG 74 27.348 66.510 24.882 1.00 50.00 C ATOM 632 HH11 ARG 74 29.188 66.869 25.238 1.00 50.00 H ATOM 633 HH12 ARG 74 28.968 66.200 23.925 1.00 50.00 H ATOM 634 NH1 ARG 74 28.654 66.528 24.655 1.00 50.00 N ATOM 635 HH21 ARG 74 25.679 65.974 24.131 1.00 50.00 H ATOM 636 HH22 ARG 74 26.840 65.657 23.253 1.00 50.00 H ATOM 637 NH2 ARG 74 26.526 65.985 23.984 1.00 50.00 N ATOM 638 N CYS 75 25.107 71.238 24.236 1.00 50.00 N ATOM 639 CA CYS 75 24.531 72.315 23.450 1.00 50.00 C ATOM 640 C CYS 75 23.184 72.107 22.807 1.00 50.00 C ATOM 641 O CYS 75 22.644 73.147 22.363 1.00 50.00 O ATOM 642 H CYS 75 25.178 70.412 23.885 1.00 50.00 H ATOM 643 CB CYS 75 25.476 72.714 22.314 1.00 50.00 C ATOM 644 SG CYS 75 27.075 73.354 22.864 1.00 50.00 S ATOM 645 N ASP 76 22.623 71.118 22.912 1.00 50.00 N ATOM 646 CA ASP 76 21.386 70.740 22.230 1.00 50.00 C ATOM 647 C ASP 76 20.083 71.360 22.761 1.00 50.00 C ATOM 648 O ASP 76 20.148 72.054 23.777 1.00 50.00 O ATOM 649 H ASP 76 23.017 70.543 23.482 1.00 50.00 H ATOM 650 CB ASP 76 21.201 69.221 22.259 1.00 50.00 C ATOM 651 CG ASP 76 20.221 68.733 21.211 1.00 50.00 C ATOM 652 OD1 ASP 76 20.427 69.039 20.017 1.00 50.00 O ATOM 653 OD2 ASP 76 19.247 68.046 21.583 1.00 50.00 O ATOM 654 N ASN 77 19.010 71.121 22.114 1.00 50.00 N ATOM 655 CA ASN 77 17.654 71.472 22.540 1.00 50.00 C ATOM 656 C ASN 77 17.161 70.346 23.452 1.00 50.00 C ATOM 657 O ASN 77 16.601 69.350 22.989 1.00 50.00 O ATOM 658 H ASN 77 19.140 70.698 21.330 1.00 50.00 H ATOM 659 CB ASN 77 16.749 71.687 21.325 1.00 50.00 C ATOM 660 CG ASN 77 15.383 72.223 21.704 1.00 50.00 C ATOM 661 OD1 ASN 77 15.251 73.002 22.647 1.00 50.00 O ATOM 662 HD21 ASN 77 13.527 72.096 21.148 1.00 50.00 H ATOM 663 HD22 ASN 77 14.500 71.238 20.284 1.00 50.00 H ATOM 664 ND2 ASN 77 14.360 71.807 20.966 1.00 50.00 N ATOM 665 N LEU 78 17.694 70.491 24.691 1.00 50.00 N ATOM 666 CA LEU 78 17.373 69.387 25.605 1.00 50.00 C ATOM 667 C LEU 78 18.394 68.254 25.498 1.00 50.00 C ATOM 668 O LEU 78 18.110 67.094 25.865 1.00 50.00 O ATOM 669 H LEU 78 18.201 71.178 24.976 1.00 50.00 H ATOM 670 CB LEU 78 15.969 68.850 25.323 1.00 50.00 C ATOM 671 CG LEU 78 14.817 69.542 26.053 1.00 50.00 C ATOM 672 CD1 LEU 78 14.641 70.967 25.552 1.00 50.00 C ATOM 673 CD2 LEU 78 13.524 68.759 25.884 1.00 50.00 C ATOM 674 N CYS 79 19.564 68.625 25.002 1.00 50.00 N ATOM 675 CA CYS 79 20.691 67.701 24.825 1.00 50.00 C ATOM 676 C CYS 79 21.869 67.650 25.798 1.00 50.00 C ATOM 677 O CYS 79 22.726 66.741 25.726 1.00 50.00 O ATOM 678 H CYS 79 19.651 69.490 24.769 1.00 50.00 H ATOM 679 CB CYS 79 21.355 67.919 23.463 1.00 50.00 C ATOM 680 SG CYS 79 20.282 67.580 22.048 1.00 50.00 S ATOM 681 N LYS 80 21.855 68.657 26.723 1.00 50.00 N ATOM 682 CA LYS 80 22.931 68.703 27.723 1.00 50.00 C ATOM 683 C LYS 80 22.725 67.589 28.749 1.00 50.00 C ATOM 684 O LYS 80 23.664 67.211 29.475 1.00 50.00 O ATOM 685 H LYS 80 21.207 69.282 26.729 1.00 50.00 H ATOM 686 CB LYS 80 22.971 70.073 28.404 1.00 50.00 C ATOM 687 CD LYS 80 21.854 71.747 29.903 1.00 50.00 C ATOM 688 CE LYS 80 20.674 72.020 30.820 1.00 50.00 C ATOM 689 CG LYS 80 21.777 70.354 29.302 1.00 50.00 C ATOM 690 HZ1 LYS 80 20.013 73.521 31.918 1.00 50.00 H ATOM 691 HZ2 LYS 80 20.699 73.991 30.726 1.00 50.00 H ATOM 692 HZ3 LYS 80 21.464 73.500 31.859 1.00 50.00 H ATOM 693 NZ LYS 80 20.717 73.396 31.388 1.00 50.00 N ATOM 694 N SER 81 21.355 67.060 28.776 1.00 50.00 N ATOM 695 CA SER 81 21.137 66.011 29.772 1.00 50.00 C ATOM 696 C SER 81 21.688 64.635 29.216 1.00 50.00 C ATOM 697 O SER 81 22.425 64.029 29.923 1.00 50.00 O ATOM 698 H SER 81 20.677 67.326 28.246 1.00 50.00 H ATOM 699 CB SER 81 19.651 65.907 30.124 1.00 50.00 C ATOM 700 HG SER 81 18.092 65.428 29.218 1.00 50.00 H ATOM 701 OG SER 81 18.892 65.478 29.006 1.00 50.00 O ATOM 702 N TYR 82 21.474 64.457 27.995 1.00 50.00 N ATOM 703 CA TYR 82 22.124 63.301 27.337 1.00 50.00 C ATOM 704 C TYR 82 23.622 63.591 27.033 1.00 50.00 C ATOM 705 O TYR 82 24.321 62.665 26.588 1.00 50.00 O ATOM 706 H TYR 82 20.945 65.007 27.518 1.00 50.00 H ATOM 707 CB TYR 82 21.391 62.937 26.045 1.00 50.00 C ATOM 708 CG TYR 82 20.007 62.367 26.266 1.00 50.00 C ATOM 709 HH TYR 82 15.633 61.405 26.719 1.00 50.00 H ATOM 710 OH TYR 82 16.197 60.815 26.869 1.00 50.00 O ATOM 711 CZ TYR 82 17.459 61.327 26.670 1.00 50.00 C ATOM 712 CD1 TYR 82 18.877 63.153 26.082 1.00 50.00 C ATOM 713 CE1 TYR 82 17.608 62.640 26.281 1.00 50.00 C ATOM 714 CD2 TYR 82 19.837 61.045 26.657 1.00 50.00 C ATOM 715 CE2 TYR 82 18.576 60.516 26.862 1.00 50.00 C ATOM 716 N SER 83 24.082 64.812 27.235 1.00 50.00 N ATOM 717 CA SER 83 25.434 65.279 26.938 1.00 50.00 C ATOM 718 C SER 83 25.802 65.067 25.475 1.00 50.00 C ATOM 719 O SER 83 26.892 64.646 25.085 1.00 50.00 O ATOM 720 H SER 83 23.478 65.379 27.588 1.00 50.00 H ATOM 721 CB SER 83 26.453 64.570 27.832 1.00 50.00 C ATOM 722 HG SER 83 26.777 64.456 29.666 1.00 50.00 H ATOM 723 OG SER 83 26.213 64.850 29.201 1.00 50.00 O ATOM 724 N SER 84 24.738 65.504 24.676 1.00 50.00 N ATOM 725 CA SER 84 24.810 65.285 23.227 1.00 50.00 C ATOM 726 C SER 84 24.580 66.567 22.444 1.00 50.00 C ATOM 727 O SER 84 24.351 66.555 21.235 1.00 50.00 O ATOM 728 H SER 84 24.021 65.912 25.035 1.00 50.00 H ATOM 729 CB SER 84 23.790 64.230 22.794 1.00 50.00 C ATOM 730 HG SER 84 24.804 62.723 23.217 1.00 50.00 H ATOM 731 OG SER 84 24.044 62.986 23.423 1.00 50.00 O ATOM 732 N CYS 85 24.907 67.578 23.080 1.00 50.00 N ATOM 733 CA CYS 85 24.644 68.829 22.395 1.00 50.00 C ATOM 734 C CYS 85 25.801 69.133 21.462 1.00 50.00 C ATOM 735 O CYS 85 26.966 68.836 21.784 1.00 50.00 O ATOM 736 H CYS 85 25.280 67.584 23.899 1.00 50.00 H ATOM 737 CB CYS 85 24.435 69.959 23.406 1.00 50.00 C ATOM 738 SG CYS 85 25.921 70.423 24.325 1.00 50.00 S ATOM 739 N CYS 86 25.470 69.879 20.428 1.00 50.00 N ATOM 740 CA CYS 86 26.552 70.474 19.653 1.00 50.00 C ATOM 741 C CYS 86 27.021 71.723 20.384 1.00 50.00 C ATOM 742 O CYS 86 26.184 72.442 20.954 1.00 50.00 O ATOM 743 H CYS 86 24.613 70.026 20.194 1.00 50.00 H ATOM 744 CB CYS 86 26.081 70.793 18.233 1.00 50.00 C ATOM 745 SG CYS 86 25.643 69.341 17.249 1.00 50.00 S ATOM 746 N HIS 87 28.367 71.933 20.220 1.00 50.00 N ATOM 747 CA HIS 87 28.959 72.980 21.053 1.00 50.00 C ATOM 748 C HIS 87 28.371 74.360 20.781 1.00 50.00 C ATOM 749 O HIS 87 28.459 75.251 21.630 1.00 50.00 O ATOM 750 H HIS 87 28.882 71.471 19.644 1.00 50.00 H ATOM 751 CB HIS 87 30.474 73.034 20.850 1.00 50.00 C ATOM 752 CG HIS 87 31.169 74.010 21.746 1.00 50.00 C ATOM 753 ND1 HIS 87 31.310 73.806 23.102 1.00 50.00 N ATOM 754 CE1 HIS 87 31.973 74.847 23.635 1.00 50.00 C ATOM 755 CD2 HIS 87 31.833 75.294 21.568 1.00 50.00 C ATOM 756 HE2 HIS 87 32.749 76.541 22.862 1.00 50.00 H ATOM 757 NE2 HIS 87 32.290 75.744 22.720 1.00 50.00 N ATOM 758 N ASP 88 27.750 74.524 19.634 1.00 50.00 N ATOM 759 CA ASP 88 27.219 75.872 19.403 1.00 50.00 C ATOM 760 C ASP 88 25.848 76.058 20.030 1.00 50.00 C ATOM 761 O ASP 88 25.280 77.151 19.961 1.00 50.00 O ATOM 762 H ASP 88 27.639 73.884 19.012 1.00 50.00 H ATOM 763 CB ASP 88 27.143 76.168 17.904 1.00 50.00 C ATOM 764 CG ASP 88 26.191 75.240 17.174 1.00 50.00 C ATOM 765 OD1 ASP 88 26.394 74.010 17.241 1.00 50.00 O ATOM 766 OD2 ASP 88 25.243 75.743 16.536 1.00 50.00 O ATOM 767 N PHE 89 25.167 75.107 20.543 1.00 50.00 N ATOM 768 CA PHE 89 23.823 75.265 21.138 1.00 50.00 C ATOM 769 C PHE 89 23.988 76.107 22.448 1.00 50.00 C ATOM 770 O PHE 89 22.966 76.781 22.572 1.00 50.00 O ATOM 771 H PHE 89 25.559 74.297 20.527 1.00 50.00 H ATOM 772 CB PHE 89 23.193 73.898 21.409 1.00 50.00 C ATOM 773 CG PHE 89 22.748 73.179 20.167 1.00 50.00 C ATOM 774 CZ PHE 89 21.925 71.842 17.874 1.00 50.00 C ATOM 775 CD1 PHE 89 22.732 73.825 18.944 1.00 50.00 C ATOM 776 CE1 PHE 89 22.323 73.163 17.801 1.00 50.00 C ATOM 777 CD2 PHE 89 22.346 71.856 20.223 1.00 50.00 C ATOM 778 CE2 PHE 89 21.937 71.194 19.080 1.00 50.00 C ATOM 779 N ASP 90 24.987 76.162 23.113 1.00 50.00 N ATOM 780 CA ASP 90 25.037 77.191 24.202 1.00 50.00 C ATOM 781 C ASP 90 24.957 78.569 23.709 1.00 50.00 C ATOM 782 O ASP 90 24.224 79.420 24.214 1.00 50.00 O ATOM 783 H ASP 90 25.689 75.615 22.978 1.00 50.00 H ATOM 784 CB ASP 90 26.317 77.037 25.026 1.00 50.00 C ATOM 785 CG ASP 90 26.300 75.800 25.903 1.00 50.00 C ATOM 786 OD1 ASP 90 25.212 75.213 26.082 1.00 50.00 O ATOM 787 OD2 ASP 90 27.374 75.418 26.412 1.00 50.00 O ATOM 788 N GLU 91 25.869 78.819 22.773 1.00 50.00 N ATOM 789 CA GLU 91 26.066 80.136 22.161 1.00 50.00 C ATOM 790 C GLU 91 24.786 80.622 21.574 1.00 50.00 C ATOM 791 O GLU 91 24.264 81.728 21.882 1.00 50.00 O ATOM 792 H GLU 91 26.381 78.124 22.520 1.00 50.00 H ATOM 793 CB GLU 91 27.159 80.071 21.092 1.00 50.00 C ATOM 794 CD GLU 91 28.057 82.415 21.376 1.00 50.00 C ATOM 795 CG GLU 91 27.452 81.404 20.422 1.00 50.00 C ATOM 796 OE1 GLU 91 28.585 81.998 22.428 1.00 50.00 O ATOM 797 OE2 GLU 91 28.003 83.626 21.070 1.00 50.00 O ATOM 798 N LEU 92 24.185 79.985 20.677 1.00 50.00 N ATOM 799 CA LEU 92 23.088 80.410 19.797 1.00 50.00 C ATOM 800 C LEU 92 21.763 80.317 20.460 1.00 50.00 C ATOM 801 O LEU 92 20.866 81.028 20.101 1.00 50.00 O ATOM 802 H LEU 92 24.520 79.153 20.610 1.00 50.00 H ATOM 803 CB LEU 92 23.074 79.573 18.516 1.00 50.00 C ATOM 804 CG LEU 92 23.938 80.085 17.362 1.00 50.00 C ATOM 805 CD1 LEU 92 25.389 80.223 17.796 1.00 50.00 C ATOM 806 CD2 LEU 92 23.830 79.161 16.158 1.00 50.00 C ATOM 807 N CYS 93 21.546 79.448 21.479 1.00 50.00 N ATOM 808 CA CYS 93 20.284 79.371 22.239 1.00 50.00 C ATOM 809 C CYS 93 20.386 80.524 23.354 1.00 50.00 C ATOM 810 O CYS 93 19.286 80.926 23.583 1.00 50.00 O ATOM 811 H CYS 93 22.228 78.897 21.682 1.00 50.00 H ATOM 812 CB CYS 93 20.101 77.974 22.836 1.00 50.00 C ATOM 813 SG CYS 93 18.516 77.718 23.667 1.00 50.00 S ATOM 814 N LEU 94 20.909 81.761 16.182 1.00 50.00 N ATOM 815 CA LEU 94 20.916 82.135 17.606 1.00 50.00 C ATOM 816 C LEU 94 20.452 83.596 17.685 1.00 50.00 C ATOM 817 O LEU 94 19.573 83.937 16.907 1.00 50.00 O ATOM 818 CB LEU 94 22.308 81.934 18.205 1.00 50.00 C ATOM 819 CG LEU 94 23.390 82.920 17.756 1.00 50.00 C ATOM 820 CD1 LEU 94 24.613 82.823 18.655 1.00 50.00 C ATOM 821 CD2 LEU 94 23.776 82.670 16.307 1.00 50.00 C ATOM 822 N LYS 95 21.105 84.488 18.392 1.00 50.00 N ATOM 823 CA LYS 95 20.827 85.930 18.172 1.00 50.00 C ATOM 824 C LYS 95 21.026 86.355 16.694 1.00 50.00 C ATOM 825 O LYS 95 20.219 87.095 16.127 1.00 50.00 O ATOM 826 H LYS 95 21.714 84.235 19.005 1.00 50.00 H ATOM 827 CB LYS 95 21.717 86.791 19.071 1.00 50.00 C ATOM 828 CD LYS 95 22.292 87.587 21.380 1.00 50.00 C ATOM 829 CE LYS 95 21.942 87.511 22.857 1.00 50.00 C ATOM 830 CG LYS 95 21.358 86.726 20.545 1.00 50.00 C ATOM 831 HZ1 LYS 95 22.643 88.249 24.548 1.00 50.00 H ATOM 832 HZ2 LYS 95 22.839 89.169 23.440 1.00 50.00 H ATOM 833 HZ3 LYS 95 23.706 88.012 23.586 1.00 50.00 H ATOM 834 NZ LYS 95 22.877 88.316 23.692 1.00 50.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 303 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 83.06 55.1 78 100.0 78 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 90.07 50.0 56 100.0 56 ARMSMC BURIED . . . . . . . . 61.74 68.2 22 100.0 22 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.14 47.2 36 100.0 36 ARMSSC1 RELIABLE SIDE CHAINS . 83.48 48.6 35 100.0 35 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 80.34 48.0 25 100.0 25 ARMSSC1 BURIED . . . . . . . . 92.20 45.5 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.94 26.1 23 100.0 23 ARMSSC2 RELIABLE SIDE CHAINS . 72.69 29.4 17 100.0 17 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 82.64 27.8 18 100.0 18 ARMSSC2 BURIED . . . . . . . . 74.47 20.0 5 100.0 5 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.13 44.4 9 100.0 9 ARMSSC3 RELIABLE SIDE CHAINS . 66.29 37.5 8 100.0 8 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 69.73 42.9 7 100.0 7 ARMSSC3 BURIED . . . . . . . . 30.22 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.68 60.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 58.68 60.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 64.68 50.0 4 100.0 4 ARMSSC4 BURIED . . . . . . . . 22.06 100.0 1 100.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.87 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.87 40 100.0 40 CRMSCA CRN = ALL/NP . . . . . 0.0968 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 3.89 29 100.0 29 CRMSCA BURIED . . . . . . . . 3.83 11 100.0 11 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.17 197 100.0 197 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 4.25 142 100.0 142 CRMSMC BURIED . . . . . . . . 3.94 55 100.0 55 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.09 143 100.0 143 CRMSSC RELIABLE SIDE CHAINS . 6.03 125 100.0 125 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 6.50 103 100.0 103 CRMSSC BURIED . . . . . . . . 4.85 40 100.0 40 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.08 303 100.0 303 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 5.33 219 100.0 219 CRMSALL BURIED . . . . . . . . 4.33 84 100.0 84 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 46.346 0.865 0.874 40 100.0 40 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 46.341 0.865 0.874 29 100.0 29 ERRCA BURIED . . . . . . . . 46.360 0.865 0.874 11 100.0 11 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 46.129 0.858 0.868 197 100.0 197 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 46.060 0.856 0.867 142 100.0 142 ERRMC BURIED . . . . . . . . 46.307 0.864 0.873 55 100.0 55 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 44.446 0.803 0.823 143 100.0 143 ERRSC RELIABLE SIDE CHAINS . 44.517 0.806 0.825 125 100.0 125 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 44.100 0.793 0.815 103 100.0 103 ERRSC BURIED . . . . . . . . 45.337 0.830 0.844 40 100.0 40 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 45.433 0.836 0.850 303 100.0 303 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 45.246 0.830 0.845 219 100.0 219 ERRALL BURIED . . . . . . . . 45.923 0.851 0.862 84 100.0 84 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 6 15 32 40 40 40 DISTCA CA (P) 0.00 15.00 37.50 80.00 100.00 40 DISTCA CA (RMS) 0.00 1.85 2.33 3.34 3.87 DISTCA ALL (N) 1 30 76 196 296 303 303 DISTALL ALL (P) 0.33 9.90 25.08 64.69 97.69 303 DISTALL ALL (RMS) 0.32 1.68 2.22 3.48 4.77 DISTALL END of the results output